/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /************************************************************ Creating a file and print the storage layout. ************************************************************/ package examples.groups; import java.util.EnumSet; import java.util.HashMap; import java.util.Map; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; import hdf.hdf5lib.structs.H5G_info_t; public class H5Ex_G_Compact { private static final String FILE1 = "H5Ex_G_Compact1.h5"; private static final String FILE2 = "H5Ex_G_Compact2.h5"; private static final String GROUP = "G1"; enum H5G_storage { H5G_STORAGE_TYPE_UNKNOWN(-1), H5G_STORAGE_TYPE_SYMBOL_TABLE(0), H5G_STORAGE_TYPE_COMPACT(1), H5G_STORAGE_TYPE_DENSE(2); private static final Map lookup = new HashMap(); static { for (H5G_storage s : EnumSet.allOf(H5G_storage.class)) lookup.put(s.getCode(), s); } private int code; H5G_storage(int layout_type) { this.code = layout_type; } public int getCode() { return this.code; } public static H5G_storage get(int code) { return lookup.get(code); } } public static void CreateGroup() { long file_id = HDF5Constants.H5I_INVALID_HID; long group_id = HDF5Constants.H5I_INVALID_HID; long fapl_id = HDF5Constants.H5I_INVALID_HID; H5G_info_t ginfo; long size; // Create file 1. This file will use original format groups. try { file_id = H5.H5Fcreate(FILE1, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Create a group in the file1. try { if (file_id >= 0) group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Obtain the group info and print the group storage type. try { if (group_id >= 0) { ginfo = H5.H5Gget_info(group_id); System.out.print("Group storage type for " + FILE1 + " is: "); switch (H5G_storage.get(ginfo.storage_type)) { case H5G_STORAGE_TYPE_COMPACT: System.out.println("H5G_STORAGE_TYPE_COMPACT"); // New compact format break; case H5G_STORAGE_TYPE_DENSE: System.out.println("H5G_STORAGE_TYPE_DENSE"); // New dense (indexed) format break; case H5G_STORAGE_TYPE_SYMBOL_TABLE: System.out.println("H5G_STORAGE_TYPE_SYMBOL_TABLE"); // Original format break; case H5G_STORAGE_TYPE_UNKNOWN: System.out.println("H5G_STORAGE_TYPE_UNKNOWN"); break; default: System.out.println("Storage Type Invalid"); break; } } } catch (Exception e) { e.printStackTrace(); } // Close the group. try { if (group_id >= 0) H5.H5Gclose(group_id); } catch (Exception e) { e.printStackTrace(); } // close the file 1. try { if (file_id >= 0) H5.H5Fclose(file_id); } catch (Exception e) { e.printStackTrace(); } // Re-open file 1. Need to get the correct file size. try { file_id = H5.H5Fopen(FILE1, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Obtain and print the file size. try { if (file_id >= 0) { size = H5.H5Fget_filesize(file_id); System.out.println("File size for " + FILE1 + " is: " + size + " bytes"); } } catch (Exception e) { e.printStackTrace(); } // Close FILE1. try { if (file_id >= 0) H5.H5Fclose(file_id); } catch (Exception e) { e.printStackTrace(); } // Set file access property list to allow the latest file format. // This will allow the library to create new compact format groups. try { fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS); if (fapl_id >= 0) H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST); } catch (Exception e) { e.printStackTrace(); } System.out.println(); // Create file 2 using the new file access property list. try { file_id = H5.H5Fcreate(FILE2, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, fapl_id); } catch (Exception e) { e.printStackTrace(); } // Create group in file2. try { if (file_id >= 0) group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); } catch (Exception e) { e.printStackTrace(); } // Obtain the group info and print the group storage type. try { if (group_id >= 0) { ginfo = H5.H5Gget_info(group_id); System.out.print("Group storage type for " + FILE2 + " is: "); switch (H5G_storage.get(ginfo.storage_type)) { case H5G_STORAGE_TYPE_COMPACT: System.out.println("H5G_STORAGE_TYPE_COMPACT"); // New compact format break; case H5G_STORAGE_TYPE_DENSE: System.out.println("H5G_STORAGE_TYPE_DENSE"); // New dense (indexed) format break; case H5G_STORAGE_TYPE_SYMBOL_TABLE: System.out.println("H5G_STORAGE_TYPE_SYMBOL_TABLE"); // Original format break; case H5G_STORAGE_TYPE_UNKNOWN: System.out.println("H5G_STORAGE_TYPE_UNKNOWN"); break; default: System.out.println("Storage Type Invalid"); break; } } } catch (Exception e) { e.printStackTrace(); } // Close the group. try { if (group_id >= 0) H5.H5Gclose(group_id); } catch (Exception e) { e.printStackTrace(); } // close the file 2. try { if (file_id >= 0) H5.H5Fclose(file_id); } catch (Exception e) { e.printStackTrace(); } // Re-open file 2. Needed to get the correct file size. try { file_id = H5.H5Fopen(FILE2, HDF5Constants.H5F_ACC_RDONLY, fapl_id); } catch (Exception e) { e.printStackTrace(); } // Obtain and print the file size. try { if (file_id >= 0) { size = H5.H5Fget_filesize(file_id); System.out.println("File size for " + FILE2 + " is: " + size + " bytes"); } } catch (Exception e) { e.printStackTrace(); } // Close FILE2. try { if (file_id >= 0) H5.H5Fclose(file_id); } catch (Exception e) { e.printStackTrace(); } } public static void main(String[] args) { H5Ex_G_Compact.CreateGroup(); } }