/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ package test; import static org.junit.Assert.assertFalse; import static org.junit.Assert.assertTrue; import static org.junit.Assert.fail; import java.util.ArrayList; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; import hdf.hdf5lib.callbacks.H5L_iterate_opdata_t; import hdf.hdf5lib.callbacks.H5L_iterate_t; import hdf.hdf5lib.exceptions.HDF5LibraryException; import hdf.hdf5lib.structs.H5L_info_t; import org.junit.After; import org.junit.Before; import org.junit.Rule; import org.junit.Test; import org.junit.rules.TestName; public class TestH5Lbasic { @Rule public TestName testname = new TestName(); private static final String H5_FILE = "h5ex_g_iterateL1.hdf"; long H5fid = HDF5Constants.H5I_INVALID_HID; @Before public void openH5file() throws HDF5LibraryException, NullPointerException { assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0); System.out.print(testname.getMethodName()); try { H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Fopen: openH5file: " + err); } } @After public void closeH5file() throws HDF5LibraryException { if (H5fid > 0) { try { H5.H5Fclose(H5fid); } catch (Exception ex) { } } System.out.println(); } @Test public void testH5Lexists() { boolean link_exists = false; try { link_exists = H5.H5Lexists(H5fid, "None", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lexists: " + err); } assertFalse("H5Lexists ", link_exists); try { link_exists = H5.H5Lexists(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lexists: " + err); } assertTrue("H5Lexists ", link_exists); try { link_exists = H5.H5Lexists(H5fid, "G1/DS2", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lexists: " + err); } assertTrue("H5Lexists ", link_exists); } @Test(expected = HDF5LibraryException.class) public void testH5Lget_info_not_exist() throws Throwable { H5.H5Lget_info(H5fid, "None", HDF5Constants.H5P_DEFAULT); } @Test public void testH5Lget_info_dataset() { H5L_info_t link_info = null; try { link_info = H5.H5Lget_info(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_info: " + err); } assertFalse("H5Lget_info ", link_info == null); assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_HARD); } @Test public void testH5Lget_info_hardlink() { H5L_info_t link_info = null; try { link_info = H5.H5Lget_info(H5fid, "L1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_info: " + err); } assertFalse("H5Lget_info", link_info == null); assertTrue("H5Lget_info link type", link_info.type == HDF5Constants.H5L_TYPE_HARD); } @Test(expected = HDF5LibraryException.class) public void testH5Lget_info_by_idx_name_not_exist_name() throws Throwable { H5.H5Lget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Lget_info_by_idx_name_not_exist_create() throws Throwable { H5.H5Lget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Lget_info_by_idx_not_exist_name() throws Throwable { H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Lget_info_by_idx_not_exist_create() throws Throwable { H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Lget_info_by_idx_n0() { H5L_info_t link_info = null; H5L_info_t link_info2 = null; try { link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_info_by_idx: " + err); } assertFalse("H5Lget_info_by_idx", link_info == null); assertTrue("H5Lget_info_by_idx link type", link_info.type == HDF5Constants.H5L_TYPE_HARD); try { link_info2 = H5.H5Lget_info(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_info: " + err); } assertTrue("Link Value Size", link_info.val_size == link_info2.val_size); } @Test public void testH5Lget_info_by_idx_n3() { H5L_info_t link_info = null; H5L_info_t link_info2 = null; try { link_info = H5.H5Lget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_info_by_idx: " + err); } assertFalse("H5Lget_info_by_idx", link_info == null); assertTrue("H5Lget_info_by_idx link type", link_info.type == HDF5Constants.H5L_TYPE_HARD); try { link_info2 = H5.H5Lget_info(H5fid, "L1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_info: " + err); } assertTrue("Link Value Size", link_info.val_size == link_info2.val_size); } @Test(expected = HDF5LibraryException.class) public void testH5Lget_name_by_idx_not_exist() throws Throwable { H5.H5Lget_name_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Lget_name_by_idx_n0() { String link_name = null; try { link_name = H5.H5Lget_name_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_name_by_idx: " + err); } assertFalse("H5Lget_name_by_idx ", link_name == null); assertTrue("Link Name ", link_name.compareTo("DS1") == 0); } @Test public void testH5Lget_name_by_idx_n3() { String link_name = null; try { link_name = H5.H5Lget_name_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lget_name_by_idx: " + err); } assertFalse("H5Lget_name_by_idx ", link_name == null); assertTrue("Link Name ", link_name.compareTo("L1") == 0); } @Test public void testH5Lvisit() { class idata { public String link_name = null; public int link_type = -1; idata(String name, int type) { this.link_name = name; this.link_type = type; } } class H5L_iter_data implements H5L_iterate_opdata_t { public ArrayList iterdata = new ArrayList(); } H5L_iterate_opdata_t iter_data = new H5L_iter_data(); class H5L_iter_callback implements H5L_iterate_t { public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5L_iter_data)op_data).iterdata.add(id); return 0; } } H5L_iterate_t iter_cb = new H5L_iter_callback(); try { H5.H5Lvisit(H5fid, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lvisit: " + err); } assertFalse("H5Lvisit ", ((H5L_iter_data)iter_data).iterdata.isEmpty()); assertTrue("H5Lvisit " + ((H5L_iter_data)iter_data).iterdata.size(), ((H5L_iter_data)iter_data).iterdata.size() == 5); assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(0)).link_name, (((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1") == 0); assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(1)).link_name, (((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DT1") == 0); assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(2)).link_name, (((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1") == 0); assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(3)).link_name, (((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1/DS2") == 0); assertTrue("H5Lvisit " + (((H5L_iter_data)iter_data).iterdata.get(4)).link_name, (((H5L_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("L1") == 0); } @Test public void testH5Lvisit_by_name() { class idata { public String link_name = null; public int link_type = -1; idata(String name, int type) { this.link_name = name; this.link_type = type; } } class H5L_iter_data implements H5L_iterate_opdata_t { public ArrayList iterdata = new ArrayList(); } H5L_iterate_opdata_t iter_data = new H5L_iter_data(); class H5L_iter_callback implements H5L_iterate_t { public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5L_iter_data)op_data).iterdata.add(id); return 0; } } H5L_iterate_t iter_cb = new H5L_iter_callback(); try { H5.H5Lvisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Lvisit_by_name: " + err); } assertFalse("H5Lvisit_by_name ", ((H5L_iter_data)iter_data).iterdata.isEmpty()); assertTrue("H5Lvisit_by_name " + ((H5L_iter_data)iter_data).iterdata.size(), ((H5L_iter_data)iter_data).iterdata.size() == 1); assertTrue("H5Lvisit_by_name " + (((H5L_iter_data)iter_data).iterdata.get(0)).link_name, (((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS2") == 0); } @Test public void testH5Literate() { class idata { public String link_name = null; public int link_type = -1; idata(String name, int type) { this.link_name = name; this.link_type = type; } } class H5L_iter_data implements H5L_iterate_opdata_t { public ArrayList iterdata = new ArrayList(); } H5L_iterate_opdata_t iter_data = new H5L_iter_data(); class H5L_iter_callback implements H5L_iterate_t { public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5L_iter_data)op_data).iterdata.add(id); return 0; } } H5L_iterate_t iter_cb = new H5L_iter_callback(); try { H5.H5Literate(H5fid, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L, iter_cb, iter_data); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Literate: " + err); } assertFalse("H5Literate ", ((H5L_iter_data)iter_data).iterdata.isEmpty()); assertTrue("H5Literate " + ((H5L_iter_data)iter_data).iterdata.size(), ((H5L_iter_data)iter_data).iterdata.size() == 4); assertTrue("H5Literate " + (((H5L_iter_data)iter_data).iterdata.get(0)).link_name, (((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS1") == 0); assertTrue("H5Literate " + (((H5L_iter_data)iter_data).iterdata.get(1)).link_name, (((H5L_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DT1") == 0); assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(2)).link_name, (((H5L_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("G1") == 0); assertTrue("H5Literate " + ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name, ((idata)((H5L_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("L1") == 0); } @Test public void testH5Literate_by_name() { class idata { public String link_name = null; public int link_type = -1; idata(String name, int type) { this.link_name = name; this.link_type = type; } } class H5L_iter_data implements H5L_iterate_opdata_t { public ArrayList iterdata = new ArrayList(); } H5L_iterate_opdata_t iter_data = new H5L_iter_data(); class H5L_iter_callback implements H5L_iterate_t { public int callback(long group, String name, H5L_info_t info, H5L_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5L_iter_data)op_data).iterdata.add(id); return 0; } } H5L_iterate_t iter_cb = new H5L_iter_callback(); try { H5.H5Literate_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0L, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Literate_by_name: " + err); } assertFalse("H5Literate_by_name ", ((H5L_iter_data)iter_data).iterdata.isEmpty()); assertTrue("H5Literate_by_name " + ((H5L_iter_data)iter_data).iterdata.size(), ((H5L_iter_data)iter_data).iterdata.size() == 1); assertTrue("H5Literate_by_name " + ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name, ((idata)((H5L_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase("DS2") == 0); } }