/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ package test; import static org.junit.Assert.assertFalse; import static org.junit.Assert.assertTrue; import static org.junit.Assert.fail; import java.util.ArrayList; import hdf.hdf5lib.H5; import hdf.hdf5lib.HDF5Constants; import hdf.hdf5lib.callbacks.H5O_iterate_opdata_t; import hdf.hdf5lib.callbacks.H5O_iterate_t; import hdf.hdf5lib.exceptions.HDF5LibraryException; import hdf.hdf5lib.structs.H5O_hdr_info_t; import hdf.hdf5lib.structs.H5O_info_t; import hdf.hdf5lib.structs.H5O_native_info_t; import hdf.hdf5lib.structs.H5O_token_t; import hdf.hdf5lib.structs.H5_ih_info_t; import org.junit.After; import org.junit.Before; import org.junit.Rule; import org.junit.Test; import org.junit.rules.TestName; public class TestH5Obasic { @Rule public TestName testname = new TestName(); private static final String H5_FILE = "h5ex_g_iterateO1.hdf"; private static H5O_token_t H5la_ds1 = null; private static H5O_token_t H5la_l1 = null; long H5fid = HDF5Constants.H5I_INVALID_HID; @Before public void openH5file() throws HDF5LibraryException, NullPointerException { assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0); System.out.print(testname.getMethodName()); try { H5fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Fopen: openH5file: " + err); } } @After public void closeH5file() throws HDF5LibraryException { if (H5fid > 0) { try { H5.H5Fclose(H5fid); } catch (Exception ex) { } } System.out.println(); } @Test(expected = HDF5LibraryException.class) public void testH5Oopen_not_exists() throws Throwable { long oid = HDF5Constants.H5I_INVALID_HID; oid = H5.H5Oopen(H5fid, "Never_created", HDF5Constants.H5P_DEFAULT); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_info_dataset() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_info_hardlink() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_info_group() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_info_datatype() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { oid = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test(expected = HDF5LibraryException.class) public void testH5Oget_info_by_name_not_exist_name() throws Throwable { H5.H5Oget_info_by_name(H5fid, "None", HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_info_by_name_not_exists() throws Throwable { H5.H5Oget_info_by_name(H5fid, "Bogus", HDF5Constants.H5P_DEFAULT); } @Test public void testH5Oget_info_by_name_dataset() { H5O_info_t obj_info = null; try { obj_info = H5.H5Oget_info_by_name(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); } @Test public void testH5Oget_info_by_name_hardlink() { H5O_info_t obj_info = null; try { obj_info = H5.H5Oget_info_by_name(H5fid, "L1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); } @Test public void testH5Oget_info_by_name_group() { H5O_info_t obj_info = null; try { obj_info = H5.H5Oget_info_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_GROUP); } @Test public void testH5Oget_info_by_name_datatype() { H5O_info_t obj_info = null; try { obj_info = H5.H5Oget_info_by_name(H5fid, "DT1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_info: " + err); } assertFalse("H5Oget_info ", obj_info == null); assertTrue("H5Oget_info object type", obj_info.type == HDF5Constants.H5O_TYPE_NAMED_DATATYPE); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_info_by_idx_name_not_exist_name() throws Throwable { H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_info_by_idx_name_not_exist_create() throws Throwable { H5.H5Oget_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_info_by_idx_not_exist_name() throws Throwable { H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_info_by_idx_not_exist_create() throws Throwable { H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Oget_info_by_idx_n0() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_info_by_idx_n0:H5.H5Oget_info: " + err); } H5la_ds1 = obj_info.token; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_info_by_idx_n0:H5.H5Oget_info_by_idx: " + err); } assertFalse("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx ", obj_info == null); assertTrue("testH5Oget_info_by_idx_n0:H5Oget_info_by_idx link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); assertTrue("testH5Oget_info_by_idx_n0:Link Object token", obj_info.token.equals(H5la_ds1)); } @Test public void testH5Oget_info_by_idx_n3() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_info_by_idx_n3:H5.H5Oget_info: " + err); } H5la_l1 = obj_info.token; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { obj_info = H5.H5Oget_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_info_by_idx_n3:H5.H5Oget_info_by_idx: " + err); } assertFalse("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx ", obj_info == null); assertTrue("testH5Oget_info_by_idx_n3:H5Oget_info_by_idx link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); assertTrue("testH5Oget_info_by_idx_n3:Link Object Token", obj_info.token.equals(H5la_l1)); } @Test public void testH5Oget_native_info_dataset() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_native_info_t native_info = null; try { oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); native_info = H5.H5Oget_native_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info: " + err); } assertFalse("H5Oget_native_info ", native_info == null); assertFalse("H5Oget_native_info ", native_info.hdr_info == null); assertFalse("H5Oget_native_info ", native_info.obj_info == null); assertFalse("H5Oget_native_info ", native_info.attr_info == null); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_native_info_hardlink() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_native_info_t native_info = null; try { oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT); native_info = H5.H5Oget_native_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info: " + err); } assertFalse("H5Oget_native_info ", native_info == null); assertFalse("H5Oget_native_info ", native_info.hdr_info == null); assertFalse("H5Oget_native_info ", native_info.obj_info == null); assertFalse("H5Oget_native_info ", native_info.attr_info == null); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_native_info_group() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_native_info_t native_info = null; try { oid = H5.H5Oopen(H5fid, "G1", HDF5Constants.H5P_DEFAULT); native_info = H5.H5Oget_native_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info: " + err); } assertFalse("H5Oget_native_info ", native_info == null); assertFalse("H5Oget_native_info ", native_info.hdr_info == null); assertFalse("H5Oget_native_info ", native_info.obj_info == null); assertFalse("H5Oget_native_info ", native_info.attr_info == null); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test public void testH5Oget_native_info_datatype() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_native_info_t native_info = null; try { oid = H5.H5Oopen(H5fid, "DT1", HDF5Constants.H5P_DEFAULT); native_info = H5.H5Oget_native_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info: " + err); } assertFalse("H5Oget_native_info ", native_info == null); assertFalse("H5Oget_native_info ", native_info.hdr_info == null); assertFalse("H5Oget_native_info ", native_info.obj_info == null); assertFalse("H5Oget_native_info ", native_info.attr_info == null); try { H5.H5Oclose(oid); } catch (Exception ex) { } } @Test(expected = HDF5LibraryException.class) public void testH5Oget_native_info_by_name_not_exist_name() throws Throwable { H5.H5Oget_native_info_by_name(H5fid, "None", HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_native_info_by_name_not_exists() throws Throwable { H5.H5Oget_native_info_by_name(H5fid, "Bogus", HDF5Constants.H5P_DEFAULT); } @Test public void testH5Oget_native_info_by_name_dataset() { H5O_native_info_t native_info = null; try { native_info = H5.H5Oget_native_info_by_name(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info_by_name: " + err); } assertFalse("H5Oget_native_info_by_name ", native_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null); } @Test public void testH5Oget_native_info_by_name_hardlink() { H5O_native_info_t native_info = null; try { native_info = H5.H5Oget_native_info_by_name(H5fid, "L1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info_by_name: " + err); } assertFalse("H5Oget_native_info_by_name ", native_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null); } @Test public void testH5Oget_native_info_by_name_group() { H5O_native_info_t native_info = null; try { native_info = H5.H5Oget_native_info_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info_by_name: " + err); } assertFalse("H5Oget_native_info_by_name ", native_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null); } @Test public void testH5Oget_native_info_by_name_datatype() { H5O_native_info_t native_info = null; try { native_info = H5.H5Oget_native_info_by_name(H5fid, "DT1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oget_native_info_by_name: " + err); } assertFalse("H5Oget_native_info_by_name ", native_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.hdr_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.obj_info == null); assertFalse("H5Oget_native_info_by_name ", native_info.attr_info == null); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_native_info_by_idx_name_not_exist_name() throws Throwable { H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_native_info_by_idx_name_not_exist_create() throws Throwable { H5.H5Oget_native_info_by_idx(H5fid, "None", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_native_info_by_idx_not_exist_name() throws Throwable { H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT); } @Test(expected = HDF5LibraryException.class) public void testH5Oget_native_info_by_idx_not_exist_create() throws Throwable { H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_CRT_ORDER, HDF5Constants.H5_ITER_INC, 5, HDF5Constants.H5P_DEFAULT); } @Test public void testH5Oget_native_info_by_idx_n0() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_native_info_t native_info = null; H5O_hdr_info_t ohdr; H5_ih_info_t oinfo; H5_ih_info_t ainfo; try { oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); native_info = H5.H5Oget_native_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_native_info_by_idx_n0:H5.H5Oget_native_info: " + err); } ohdr = native_info.hdr_info; oinfo = native_info.obj_info; ainfo = native_info.attr_info; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { native_info = H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_native_info_by_idx_n0:H5.H5Oget_native_info_by_idx: " + err); } assertFalse("H5Oget_native_info_by_idx ", native_info == null); assertFalse("H5Oget_native_info_by_idx ", native_info.hdr_info == null); assertFalse("H5Oget_native_info_by_idx ", native_info.obj_info == null); assertFalse("H5Oget_native_info_by_idx ", native_info.attr_info == null); assertTrue("testH5Oget_native_info_by_idx_n0:Object Header Info", native_info.hdr_info.equals(ohdr)); assertTrue("testH5Oget_native_info_by_idx_n0:Object Info", native_info.obj_info.equals(oinfo)); assertTrue("testH5Oget_native_info_by_idx_n0:Attribute Info", native_info.attr_info.equals(ainfo)); } @Test public void testH5Oget_native_info_by_idx_n3() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_native_info_t native_info = null; H5O_hdr_info_t ohdr; H5_ih_info_t oinfo; H5_ih_info_t ainfo; try { oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT); native_info = H5.H5Oget_native_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_native_info_by_idx_n3:H5.H5Oget_native_info: " + err); } ohdr = native_info.hdr_info; oinfo = native_info.obj_info; ainfo = native_info.attr_info; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { native_info = H5.H5Oget_native_info_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oget_native_info_by_idx_n3:H5.H5Oget_native_info_by_idx: " + err); } assertFalse("H5Oget_native_info_by_idx ", native_info == null); assertFalse("H5Oget_native_info_by_idx ", native_info.hdr_info == null); assertFalse("H5Oget_native_info_by_idx ", native_info.obj_info == null); assertFalse("H5Oget_native_info_by_idx ", native_info.attr_info == null); assertTrue("testH5Oget_native_info_by_idx_n3:Object Header Info", native_info.hdr_info.equals(ohdr)); assertTrue("testH5Oget_native_info_by_idx_n3:Object Info", native_info.obj_info.equals(oinfo)); assertTrue("testH5Oget_native_info_by_idx_n3:Attribute Info", native_info.attr_info.equals(ainfo)); } @Test public void testH5Ovisit() { class idata { public String link_name = null; public int link_type = -1; idata(String name, int type) { this.link_name = name; this.link_type = type; } } class H5O_iter_data implements H5O_iterate_opdata_t { public ArrayList iterdata = new ArrayList(); } H5O_iterate_opdata_t iter_data = new H5O_iter_data(); class H5O_iter_callback implements H5O_iterate_t { public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5O_iter_data)op_data).iterdata.add(id); return 0; } } H5O_iterate_t iter_cb = new H5O_iter_callback(); try { H5.H5Ovisit(H5fid, HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Ovisit: " + err); } assertFalse("H5Ovisit ", ((H5O_iter_data)iter_data).iterdata.isEmpty()); assertTrue("H5Ovisit " + ((H5O_iter_data)iter_data).iterdata.size(), ((H5O_iter_data)iter_data).iterdata.size() == 5); assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(0)).link_name, (((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") == 0); assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(1)).link_name, (((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS1") == 0); assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(2)).link_name, (((H5O_iter_data)iter_data).iterdata.get(2)).link_name.compareToIgnoreCase("DT1") == 0); assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(3)).link_name, (((H5O_iter_data)iter_data).iterdata.get(3)).link_name.compareToIgnoreCase("G1") == 0); assertTrue("H5Ovisit " + (((H5O_iter_data)iter_data).iterdata.get(4)).link_name, (((H5O_iter_data)iter_data).iterdata.get(4)).link_name.compareToIgnoreCase("G1/DS2") == 0); // assertTrue("H5Ovisit // "+((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name,((idata)((H5O_iter_data)iter_data).iterdata.get(5)).link_name.compareToIgnoreCase("L1")==0); } @Test public void testH5Ovisit_by_name() { class idata { public String link_name = null; public int link_type = -1; idata(String name, int type) { this.link_name = name; this.link_type = type; } } class H5O_iter_data implements H5O_iterate_opdata_t { public ArrayList iterdata = new ArrayList(); } H5O_iterate_opdata_t iter_data = new H5O_iter_data(); class H5O_iter_callback implements H5O_iterate_t { public int callback(long group, String name, H5O_info_t info, H5O_iterate_opdata_t op_data) { idata id = new idata(name, info.type); ((H5O_iter_data)op_data).iterdata.add(id); return 0; } } H5O_iterate_t iter_cb = new H5O_iter_callback(); try { H5.H5Ovisit_by_name(H5fid, "G1", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, iter_cb, iter_data, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Ovisit_by_name: " + err); } assertFalse("H5Ovisit_by_name ", ((H5O_iter_data)iter_data).iterdata.isEmpty()); assertTrue("H5Ovisit_by_name " + ((H5O_iter_data)iter_data).iterdata.size(), ((H5O_iter_data)iter_data).iterdata.size() == 2); assertTrue("H5Ovisit_by_name " + (((H5O_iter_data)iter_data).iterdata.get(0)).link_name, (((H5O_iter_data)iter_data).iterdata.get(0)).link_name.compareToIgnoreCase(".") == 0); assertTrue("H5Ovisit_by_name " + (((H5O_iter_data)iter_data).iterdata.get(1)).link_name, (((H5O_iter_data)iter_data).iterdata.get(1)).link_name.compareToIgnoreCase("DS2") == 0); } @Test public void testH5Oexists_by_name() { boolean name_exists = false; try { name_exists = H5.H5Oexists_by_name(H5fid, "G1", HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("H5.H5Oexists_by_name: " + err); } assertTrue("H5Oexists_by_name ", name_exists); // TODO get dangling link result } @Test public void testH5Oopen_by_token() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { try { oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_token: H5.H5Oget_info: " + err); } H5la_ds1 = obj_info.token; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { oid = H5.H5Oopen_by_token(H5fid, H5la_ds1); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_token: H5.H5Oopen_by_token: " + err); } try { obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_token: H5.H5Oget_info: " + err); } assertFalse("testH5Oopen_by_token: H5Oget_info ", obj_info == null); assertTrue("testH5Oopen_by_token: H5Oget_info link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); assertTrue("testH5Oopen_by_token: Link Object Token", obj_info.token.equals(H5la_ds1)); } finally { try { H5.H5Oclose(oid); } catch (Exception ex) { } } } @Test public void testH5Oopen_by_idx_n0() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { try { oid = H5.H5Oopen(H5fid, "DS1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_idx_n0: H5.H5Oget_info: " + err); } H5la_ds1 = obj_info.token; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 0, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_idx_n0: H5.H5Oopen_by_idx: " + err); } try { obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_idx_n0: H5.H5Oget_info_by_idx: " + err); } assertFalse("testH5Oopen_by_idx_n0: H5Oget_info_by_idx ", obj_info == null); assertTrue("testH5Oopen_by_idx_n0: H5Oget_info_by_idx link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); assertTrue("testH5Oopen_by_idx_n0: Link Object Token", obj_info.token.equals(H5la_ds1)); } finally { try { H5.H5Oclose(oid); } catch (Exception ex) { } } } @Test public void testH5Oopen_by_idx_n3() { long oid = HDF5Constants.H5I_INVALID_HID; H5O_info_t obj_info = null; try { try { oid = H5.H5Oopen(H5fid, "L1", HDF5Constants.H5P_DEFAULT); obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_idx_n3:H5.H5Oget_info: " + err); } H5la_l1 = obj_info.token; try { H5.H5Oclose(oid); } catch (Exception ex) { } try { oid = H5.H5Oopen_by_idx(H5fid, "/", HDF5Constants.H5_INDEX_NAME, HDF5Constants.H5_ITER_INC, 3, HDF5Constants.H5P_DEFAULT); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_idx_n3: H5.H5Oopen_by_idx: " + err); } try { obj_info = H5.H5Oget_info(oid); } catch (Throwable err) { err.printStackTrace(); fail("testH5Oopen_by_idx_n3:H5.H5Oget_info_by_idx: " + err); } assertFalse("testH5Oopen_by_idx_n3:H5Oget_info_by_idx ", obj_info == null); assertTrue("testH5Oopen_by_idx_n3:H5Oget_info_by_idx link type", obj_info.type == HDF5Constants.H5O_TYPE_DATASET); assertTrue("testH5Oopen_by_idx_n3:Link Object Token", obj_info.token.equals(H5la_l1)); } finally { try { H5.H5Oclose(oid); } catch (Exception ex) { } } } }