************************************************************************* * Installation Instructions for HDF5 * ************************************************************************* Instructions for the Installation of HDF5 Software ================================================== This file provides instructions for installing the HDF5 software. For help with installing, questions can be posted to the HDF Forum or sent to the HDF Helpdesk: HDF Forum: https://forum.hdfgroup.org/ HDF Helpdesk: https://hdfgroup.atlassian.net/servicedesk/customer/portals CONTENTS -------- 1. Obtaining HDF5 2. Third-party Software Requirements 2.1. Zlib 2.2 Szip (optional) 2.3. MPI and MPI-IO ***************************************************************************** 1. Obtaining HDF5 The latest supported public releases of HDF5 are available on https://github.com/HDFGroup/hdf5. 2. Third-party Software Requirements 2.1. Zlib The HDF5 library includes a predefined compression filter that uses the "deflate" method for chunked datasets. If zlib-1.1.2 or later is found, HDF5 will use it. Otherwise, HDF5's predefined compression method will degenerate to a no-op; the compression filter will succeed but the data will not be compressed. 2.2. Szip (optional) The HDF5 library includes a predefined compression filter that uses the extended-Rice lossless compression algorithm for chunked datasets. Building instructions are available with the Szip source code. The HDF Group does not distribute separate Szip precompiled libraries, but the HDF5 pre-built binaries provided on The HDF Group download page include the Szip library with the encoder enabled. These can be found here: https://www.hdfgroup.org/downloads/hdf5/ Please notice that if HDF5 configure cannot find a valid Szip library, configure will not fail; in this case, the compression filter will not be available to the applications. To check if Szip compression was successfully configured in, check the "I/O filters (external):" line in the configure output, summary section, printed to the standard output. 2.3. MPI and MPI-IO The parallel version of the library is built upon the foundation provided by MPI and MPI-IO. If these libraries are not available when HDF5 is configured, only a serial version of HDF5 can be built. 3. HDF5 Source Code and Precompiled Binaries The HDF Group provides source code and pre-compiled binaries from the HDF5 github releases page: https://github.com/HDFGroup/hdf5/releases 4. Build and Install HDF5 on Unix and Mac OSX Platforms with autotools see the release_docs/INSTALL_Autotools.txt file. 5. Build and Install HDF5 Libraries and tools with CMake see the release_docs/INSTALL_CMake.txt file.