HDF5 version 1.10.0-alpha0 released on 2015-12-29 ================================================================================ INTRODUCTION This document describes the differences between HDF5-1.8.* and HDF5 1.10.0-alpha0 release, and contains information on the platforms tested and known problems in HDF5-1.10.0-alpha0. Links to HDF5 1.10.0-alpha* source code can be found on The HDF Group's development FTP server at the following location: http://www.hdfgroup.org/HDF5/release/obtain5110.html User documentation be accessed directly at this location: http://www.hdfgroup.org/HDF5/docNewFeatures/ For more information, see the HDF5 home page: http://www.hdfgroup.org/HDF5/ If you have any questions or comments, please send them to the HDF Help Desk: help@hdfgroup.org CONTENTS - New Features - Tested Configuration Features Summary - More Tested Platforms - Known Problems New Features ============ This alpha0 release supports the following new features: Library: -------- - Concurrent access to HDF5 file - Single Writer/ Multple Reader (SWMR) The Single Writer/ Multiple Reader or SWMR feature enables users to read data concurrently while writing it. Communications between the processes and file locking are not required. The processes can run on the same or on different platforms, as long as they share a common file system that is POSIX compliant. For more information, see the Single-Writer/Multiple-Reader (SWMR) Documentation at https://www.hdfgroup.org/HDF5/docNewFeatures/NewFeaturesSwmrDocs.html - Virtual Dataset (VDS) The VDS feature enables data to be accessed across HDF5 files using standard HDF5 objects such as groups and datasets without rewriting or rearranging the data. An HDF5 virtual dataset (VDS) is an HDF5 dataset that is composed of source HDF5 datasets in a predefined mapping. VDS can be used with the SWMR feature. For documentation check https://www.hdfgroup.org/HDF5/docNewFeatures/NewFeaturesSwmrDocs.html - Persistent Free File Space Tracking Usage patterns when working with an HDF5 file sometimes result in wasted space within the file. This can also impair access times when working with the resulting files. The new file space management feature provides strategies for managing space in a file to improve performance in both of these areas. For more information see http://www.hdfgroup.org/HDF5/docNewFeatures/NewFeaturesFileSpaceMgmtDocs.html Tools: ------ - h5watch Allows users to output new records appended to a dataset iunder SWMR access as it grows. The functionality is similar to the Unix user command "tail" with the follow option, which outputs appended data as the file grows. For more information see http://www.hdfgroup.org/HDF5/docNewFeatures/NewFeaturesSwmrDocs.html#Tools - h5format_convert The tool allows users to convert the indexing type of a chunked dataset made with a 1.10.x version of the HDF5 library when the latest file format is used to the 1.8.x version 1 B-tree indexing type. For example, datasets created using SWMR access, can be converted to be accessed by the HDF5 1.18 library and tools. The tools doesn't rewrite raw data, but HDF5 metadata only. High-Level APIs: ------ - H5DOappend The function appends data to a dataset along a specified dimension. Other important changes: ----------------------- hid_t type was changed from 32-bit to a 64-bit value. Documentation ------------- See http://www.hdfgroup.org/HDF5/docNewFeatures/NewFeaturesSwmrDocs.html#Tools Supported Platforms =================== The following platforms are supported and have been tested for this release. They are built with the configure process unless specified otherwise. AIX 6.1 xlc/xlc_r 10.1.0.5 (NASA G-ADA) xlC/xlC_r 10.1.0.5 xlf90/xlf90_r 12.1.0.6 Linux 2.6.32-573.3.1.el6 GNU C (gcc), Fortran (gfortran), C++ (g++) #1 SMP x86_64 GNU/Linux compilers: (platypus) Version 4.4.7 20120313 Version 4.8.4, Version 5.2.0 PGI C, Fortran, C++ for 64-bit target on x86-64; Version 15.7-0 Intel(R) C (icc), C++ (icpc), Fortran (icc) compilers: Version 15.0.3.187 Build 20150407 MPICH 3.1.4 compiled with GCC 4.9.3 Linux 2.6.32-504.8.1.el6.ppc64 gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11) #1 SMP ppc64 GNU/Linux g++ (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11) (ostrich) GNU Fortran (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11) IBM XL C/C++ V13.1 IBM XL Fortran V15.1 Linux 3.10.0-229.14.1.el7 GNU C (gcc), Fortran (gfortran), C++ (g++) #1 SMP x86_64 GNU/Linux compilers: (kituo/moohan) Version 4.8.3 20140911 (Red Hat 4.8.3-9) Version 5.2.0 Intel(R) C (icc), C++ (icpc), Fortran (icc) compilers: Version 15.0.3.187 Build 20150407 MPICH 3.1.4 compiled with GCC 4.9.3 SunOS 5.11 32- and 64-bit Sun C 5.12 SunOS_sparc (emu) Sun Fortran 95 8.6 SunOS_sparc Sun C++ 5.12 SunOS_sparc Windows 7 Visual Studio 2012 w/ Intel Fortran 15 (cmake) Visual Studio 2013 w/ Intel Fortran 15 (cmake) Visual Studio 2015 w/ Intel Fortran 16 (cmake) Cygwin(CYGWIN_NT-6.1 2.2.1(0.289/5/3) gcc(4.9.3) compiler and gfortran) (cmake and autotools) Windows 7 x64 Visual Studio 2012 w/ Intel Fortran 15 (cmake) Visual Studio 2013 w/ Intel Fortran 15 (cmake) Visual Studio 2015 w/ Intel Fortran 16 (cmake) Windows 8.1 Visual Studio 2012 w/ Intel Fortran 15 (cmake) Visual Studio 2013 w/ Intel Fortran 15 (cmake) Windows 8.1 x64 Visual Studio 2012 w/ Intel Fortran 15 (cmake) Visual Studio 2013 w/ Intel Fortran 15 (cmake) Mac OS X Mt. Lion 10.8.5 Apple clang/clang++ version 5.1 from Xcode 5.1 64-bit gfortran GNU Fortran (GCC) 4.8.2 (swallow/kite) Intel icc/icpc/ifort version 15.0.3 Mac OS X Mavericks 10.9.5 Apple clang/clang++ version 6.0 from Xcode 6.2.0 64-bit gfortran GNU Fortran (GCC) 4.9.2 (wren/quail) Intel icc/icpc/ifort version 15.0.3 Mac OS X Yosemite 10.10.5 Apple clang/clang++ version 6.0 from Xcode 7.0.0 64-bit gfortran GNU Fortran (GCC) 4.9.2 (osx1010dev/osx1010test) Intel icc/icpc/ifort version 15.0.3 Tested Configuration Features Summary ===================================== In the tables below y = tested n = not tested in this release C = Cluster W = Workstation x = not working in this release dna = does not apply ( ) = footnote appears below second table = testing incomplete on this feature or platform Platform C F90/ F90 C++ zlib SZIP parallel F2003 parallel SunOS 5.11 32-bit n y/y n y y y SunOS 5.11 64-bit n y/y n y y y Windows 7 y y/y n y y y Windows 7 x64 y y/y n y y y Windows 7 Cygwin n y/y n y y n Windows 8.1 n y/y n y y y Windows 8.1 x64 n y/y n y y y Mac OS X Mountain Lion 10.8.5 64-bit n y/y n y y y Mac OS X Mavericks 10.9.5 64-bit n y/y n y y y Mac OS X Yosemeti 10.10.5 64-bit n y/y n y y y AIX 6.1 32- and 64-bit n y/n n y y y CentOS 6.7 Linux 2.6.32 x86_64 GNU y y/y y y y y CentOS 6.7 Linux 2.6.32 x86_64 Intel n y/y n y y y CentOS 6.7 Linux 2.6.32 x86_64 PGI n y/y n y y y CentOS 7.1 Linux 3.10.0 x86_64 GNU y y/y y y y y CentOS 7.1 Linux 3.10.0 x86_64 Intel n y/y n y y y Linux 2.6.32-431.11.2.el6.ppc64 n y/n n y y y Platform Shared Shared Shared Thread- C libs F90 libs C++ libs safe SunOS 5.11 32-bit y y y y SunOS 5.11 64-bit y y y y Windows 7 y y y y Windows 7 x64 y y y y Windows 7 Cygwin n n n y Windows 8.1 y y y y Windows 8.1 x64 y y y y Mac OS X Mountain Lion 10.8.5 64-bit y n y y Mac OS X Mavericks 10.9.5 64-bit y n y y Mac OS X Yosemeti 10.10.5 64-bit y n y y AIX 6.1 32- and 64-bit y n n y CentOS 6.7 Linux 2.6.32 x86_64 GNU y y y y CentOS 6.7 Linux 2.6.32 x86_64 Intel y y y y CentOS 6.7 Linux 2.6.32 x86_64 PGI y y y y CentOS 7.1 Linux 3.10.0 x86_64 GNU y y y y CentOS 7.1 Linux 3.10.0 x86_64 Intel y y y y Linux 2.6.32-431.11.2.el6.ppc64 y y y y Compiler versions for each platform are listed in the preceding "Supported Platforms" table. More Tested Platforms ===================== The following platforms are not supported but have been tested for this release. Linux 2.6.18-431.11.2.el6 g95 (GCC 4.0.3 (g95 0.94!) #1 SMP x86_64 GNU/Linux (platypus) Mac OS X El Capitan 10.11 Apple clang/clang++ version 7.0.0 from Xcode 7.0.1 64-bit gfortran GNU Fortran (GCC) 5.2.0 (VM) Windows 7 Visual Studio 2008 (cmake) Windows 7 x64 Visual Studio 2008 (cmake) Windows 10 Visual Studio 2013 w/ Intel Fortran 15 (cmake) Windows 10 x64 Visual Studio 2013 w/ Intel Fortran 15 (cmake) Debian7.5.0 3.2.0-4-amd64 #1 SMP Debian 3.2.51-1 x86_64 GNU/Linux gcc (Debian 4.7.2-5) 4.7.2 GNU Fortran (Debian 4.7.2-5) 4.7.2 (cmake and autotools) Fedora20 3.15.3-200.fc20.x86_64 #1 SMP x86_64 x86_64 x86_64 GNU/Linux gcc (GCC) 4.8.3 20140624 (Red Hat 4.8.3-1) GNU Fortran (GCC) 4.8.3 20140624 (Red Hat 4.8.3-1) (cmake and autotools) SUSE 13.1 3.11.10-17-desktop #1 SMP PREEMPT x86_64 x86_64 x86_64 GNU/Linux gcc (SUSE Linux) 4.8.1 GNU Fortran (SUSE Linux) 4.8.1 (cmake and autotools) Ubuntu 14.04 3.13.0-35-generic #62-Ubuntu SMP x86_64 GNU/Linux gcc (Ubuntu/Linaro 4.9.1-0ubuntu1) 4.9.1 GNU Fortran (Ubuntu/Linaro 4.9.1-0ubuntu1) 4.9.1 (cmake and autotools) hopper.nersc.gov PrgEnv-gnu/5.2.40 gcc (GCC) 4.9.2 20141030 (Cray Inc.) GNU Fortran (GCC) 4.9.2 20141030 (Cray Inc.) g++ (GCC) 4.9.2 20141030 (Cray Inc.) Known Problems ============== WARNINGS: This section is under contsruction. It will be updated for the first HDF5 1.10.0-beta release.