/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /*------------------------------------------------------------------------- * * Created: H5B2cache.c * Jan 31 2005 * Quincey Koziol * * Purpose: Implement v2 B-tree metadata cache methods. * *------------------------------------------------------------------------- */ /****************/ /* Module Setup */ /****************/ #define H5B2_PACKAGE /*suppress error about including H5B2pkg */ /***********/ /* Headers */ /***********/ #include "H5private.h" /* Generic Functions */ #include "H5B2pkg.h" /* v2 B-trees */ #include "H5Eprivate.h" /* Error handling */ #include "H5MFprivate.h" /* File memory management */ #include "H5WBprivate.h" /* Wrapped Buffers */ /****************/ /* Local Macros */ /****************/ /* B-tree format version #'s */ #define H5B2_HDR_VERSION 0 /* Header */ #define H5B2_INT_VERSION 0 /* Internal node */ #define H5B2_LEAF_VERSION 0 /* Leaf node */ /* Size of stack buffer for serialized headers */ #define H5B2_HDR_BUF_SIZE 128 /******************/ /* Local Typedefs */ /******************/ /********************/ /* Package Typedefs */ /********************/ /********************/ /* Local Prototypes */ /********************/ /* Metadata cache callbacks */ static H5B2_hdr_t *H5B2__cache_hdr_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata); static herr_t H5B2__cache_hdr_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_hdr_t *hdr, unsigned UNUSED * flags_ptr); static herr_t H5B2__cache_hdr_dest(H5F_t *f, H5B2_hdr_t *hdr); static herr_t H5B2__cache_hdr_clear(H5F_t *f, H5B2_hdr_t *hdr, hbool_t destroy); static herr_t H5B2__cache_hdr_size(const H5F_t *f, const H5B2_hdr_t *hdr, size_t *size_ptr); static H5B2_internal_t *H5B2__cache_internal_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata); static herr_t H5B2__cache_internal_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_internal_t *i, unsigned UNUSED * flags_ptr); static herr_t H5B2__cache_internal_dest(H5F_t *f, H5B2_internal_t *internal); static herr_t H5B2__cache_internal_clear(H5F_t *f, H5B2_internal_t *i, hbool_t destroy); static herr_t H5B2__cache_internal_size(const H5F_t *f, const H5B2_internal_t *i, size_t *size_ptr); static H5B2_leaf_t *H5B2__cache_leaf_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata); static herr_t H5B2__cache_leaf_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_leaf_t *l, unsigned UNUSED * flags_ptr); static herr_t H5B2__cache_leaf_dest(H5F_t *f, H5B2_leaf_t *leaf); static herr_t H5B2__cache_leaf_clear(H5F_t *f, H5B2_leaf_t *l, hbool_t destroy); static herr_t H5B2__cache_leaf_size(const H5F_t *f, const H5B2_leaf_t *l, size_t *size_ptr); /*********************/ /* Package Variables */ /*********************/ /* H5B2 inherits cache-like properties from H5AC */ const H5AC_class_t H5AC_BT2_HDR[1] = {{ H5AC_BT2_HDR_ID, (H5AC_load_func_t)H5B2__cache_hdr_load, (H5AC_flush_func_t)H5B2__cache_hdr_flush, (H5AC_dest_func_t)H5B2__cache_hdr_dest, (H5AC_clear_func_t)H5B2__cache_hdr_clear, (H5AC_notify_func_t)NULL, (H5AC_size_func_t)H5B2__cache_hdr_size, }}; /* H5B2 inherits cache-like properties from H5AC */ const H5AC_class_t H5AC_BT2_INT[1] = {{ H5AC_BT2_INT_ID, (H5AC_load_func_t)H5B2__cache_internal_load, (H5AC_flush_func_t)H5B2__cache_internal_flush, (H5AC_dest_func_t)H5B2__cache_internal_dest, (H5AC_clear_func_t)H5B2__cache_internal_clear, (H5AC_notify_func_t)NULL, (H5AC_size_func_t)H5B2__cache_internal_size, }}; /* H5B2 inherits cache-like properties from H5AC */ const H5AC_class_t H5AC_BT2_LEAF[1] = {{ H5AC_BT2_LEAF_ID, (H5AC_load_func_t)H5B2__cache_leaf_load, (H5AC_flush_func_t)H5B2__cache_leaf_flush, (H5AC_dest_func_t)H5B2__cache_leaf_dest, (H5AC_clear_func_t)H5B2__cache_leaf_clear, (H5AC_notify_func_t)NULL, (H5AC_size_func_t)H5B2__cache_leaf_size, }}; /*****************************/ /* Library Private Variables */ /*****************************/ /*******************/ /* Local Variables */ /*******************/ /*------------------------------------------------------------------------- * Function: H5B2__cache_hdr_load * * Purpose: Loads a B-tree header from the disk. * * Return: Success: Pointer to a new B-tree. * Failure: NULL * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static H5B2_hdr_t * H5B2__cache_hdr_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_udata) { H5B2_hdr_t *hdr = NULL; /* B-tree header */ H5B2_hdr_cache_ud_t *udata = (H5B2_hdr_cache_ud_t *)_udata; H5B2_create_t cparam; /* B-tree creation parameters */ H5B2_subid_t id; /* ID of B-tree class, as found in file */ uint16_t depth; /* Depth of B-tree */ uint32_t stored_chksum; /* Stored metadata checksum value */ uint32_t computed_chksum; /* Computed metadata checksum value */ H5WB_t *wb = NULL; /* Wrapped buffer for header data */ uint8_t hdr_buf[H5B2_HDR_BUF_SIZE]; /* Buffer for header */ uint8_t *buf; /* Pointer to header buffer */ const uint8_t *p; /* Pointer into raw data buffer */ H5B2_hdr_t *ret_value; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(udata); /* Allocate new B-tree header and reset cache info */ if(NULL == (hdr = H5B2__hdr_alloc(udata->f))) HGOTO_ERROR(H5E_BTREE, H5E_CANTALLOC, NULL, "allocation failed for B-tree header") /* Wrap the local buffer for serialized header info */ if(NULL == (wb = H5WB_wrap(hdr_buf, sizeof(hdr_buf)))) HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, NULL, "can't wrap buffer") /* Get a pointer to a buffer that's large enough for header */ if(NULL == (buf = (uint8_t *)H5WB_actual(wb, hdr->hdr_size))) HGOTO_ERROR(H5E_BTREE, H5E_NOSPACE, NULL, "can't get actual buffer") /* Read header from disk */ if(H5F_block_read(f, H5FD_MEM_BTREE, addr, hdr->hdr_size, dxpl_id, buf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree header") /* Get temporary pointer to serialized header */ p = buf; /* Magic number */ if(HDmemcmp(p, H5B2_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "wrong B-tree header signature") p += H5_SIZEOF_MAGIC; /* Version */ if(*p++ != H5B2_HDR_VERSION) HGOTO_ERROR(H5E_BTREE, H5E_BADRANGE, NULL, "wrong B-tree header version") /* B-tree class */ id = (H5B2_subid_t)*p++; if(id >= H5B2_NUM_BTREE_ID) HGOTO_ERROR(H5E_BTREE, H5E_BADTYPE, NULL, "incorrect B-tree type") /* Node size (in bytes) */ UINT32DECODE(p, cparam.node_size); /* Raw key size (in bytes) */ UINT16DECODE(p, cparam.rrec_size); /* Depth of tree */ UINT16DECODE(p, depth); /* Split & merge %s */ cparam.split_percent = *p++; cparam.merge_percent = *p++; /* Root node pointer */ H5F_addr_decode(udata->f, (const uint8_t **)&p, &(hdr->root.addr)); UINT16DECODE(p, hdr->root.node_nrec); H5F_DECODE_LENGTH(udata->f, p, hdr->root.all_nrec); /* Metadata checksum */ UINT32DECODE(p, stored_chksum); /* Sanity check */ HDassert((size_t)(p - (const uint8_t *)buf) == hdr->hdr_size); /* Compute checksum on entire header */ computed_chksum = H5_checksum_metadata(buf, (hdr->hdr_size - H5B2_SIZEOF_CHKSUM), 0); /* Verify checksum */ if(stored_chksum != computed_chksum) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "incorrect metadata checksum for v2 B-tree header") /* Initialize B-tree header info */ cparam.cls = H5B2_client_class_g[id]; if(H5B2__hdr_init(hdr, &cparam, udata->ctx_udata, depth) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, NULL, "can't initialize B-tree header info") /* Set the B-tree header's address */ hdr->addr = addr; /* Set return value */ ret_value = hdr; done: /* Release resources */ if(wb && H5WB_unwrap(wb) < 0) HDONE_ERROR(H5E_BTREE, H5E_CLOSEERROR, NULL, "can't close wrapped buffer") if(!ret_value && hdr) if(H5B2__hdr_free(hdr) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTRELEASE, NULL, "can't release v2 B-tree header") FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_hdr_load() */ /*lint !e818 Can't make udata a pointer to const */ /*------------------------------------------------------------------------- * Function: H5B2__cache_hdr_flush * * Purpose: Flushes a dirty B-tree header to disk. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_hdr_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_hdr_t *hdr, unsigned UNUSED * flags_ptr) { H5WB_t *wb = NULL; /* Wrapped buffer for header data */ uint8_t hdr_buf[H5B2_HDR_BUF_SIZE]; /* Buffer for header */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(hdr); if(hdr->cache_info.is_dirty) { uint8_t *buf; /* Pointer to header buffer */ uint8_t *p; /* Pointer into raw data buffer */ uint32_t metadata_chksum; /* Computed metadata checksum value */ /* Set the B-tree header's file context for this operation */ hdr->f = f; /* Wrap the local buffer for serialized header info */ if(NULL == (wb = H5WB_wrap(hdr_buf, sizeof(hdr_buf)))) HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "can't wrap buffer") /* Get a pointer to a buffer that's large enough for header */ if(NULL == (buf = (uint8_t *)H5WB_actual(wb, hdr->hdr_size))) HGOTO_ERROR(H5E_BTREE, H5E_NOSPACE, FAIL, "can't get actual buffer") /* Get temporary pointer to serialized header */ p = buf; /* Magic number */ HDmemcpy(p, H5B2_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC); p += H5_SIZEOF_MAGIC; /* Version # */ *p++ = H5B2_HDR_VERSION; /* B-tree type */ *p++ = hdr->cls->id; /* Node size (in bytes) */ UINT32ENCODE(p, hdr->node_size); /* Raw key size (in bytes) */ UINT16ENCODE(p, hdr->rrec_size); /* Depth of tree */ UINT16ENCODE(p, hdr->depth); /* Split & merge %s */ H5_CHECK_OVERFLOW(hdr->split_percent, /* From: */ unsigned, /* To: */ uint8_t); *p++ = (uint8_t)hdr->split_percent; H5_CHECK_OVERFLOW(hdr->merge_percent, /* From: */ unsigned, /* To: */ uint8_t); *p++ = (uint8_t)hdr->merge_percent; /* Root node pointer */ H5F_addr_encode(f, &p, hdr->root.addr); UINT16ENCODE(p, hdr->root.node_nrec); H5F_ENCODE_LENGTH(f, p, hdr->root.all_nrec); /* Compute metadata checksum */ metadata_chksum = H5_checksum_metadata(buf, (hdr->hdr_size - H5B2_SIZEOF_CHKSUM), 0); /* Metadata checksum */ UINT32ENCODE(p, metadata_chksum); /* Write the B-tree header. */ HDassert((size_t)(p - buf) == hdr->hdr_size); if(H5F_block_write(f, H5FD_MEM_BTREE, addr, hdr->hdr_size, dxpl_id, buf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree header to disk") hdr->cache_info.is_dirty = FALSE; } /* end if */ if(destroy) if(H5B2__cache_hdr_dest(f, hdr) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree header") done: /* Release resources */ if(wb && H5WB_unwrap(wb) < 0) HDONE_ERROR(H5E_BTREE, H5E_CLOSEERROR, FAIL, "can't close wrapped buffer") FUNC_LEAVE_NOAPI(ret_value) } /* H5B2__cache_hdr_flush() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_hdr_dest * * Purpose: Destroys a B-tree header in memory. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_hdr_dest(H5F_t *f, H5B2_hdr_t *hdr) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(hdr); HDassert(hdr->rc == 0); /* If we're going to free the space on disk, the address must be valid */ HDassert(!hdr->cache_info.free_file_space_on_destroy || H5F_addr_defined(hdr->cache_info.addr)); /* Check for freeing file space for B-tree header */ if(hdr->cache_info.free_file_space_on_destroy) { /* Release the space on disk */ /* (XXX: Nasty usage of internal DXPL value! -QAK) */ if(H5MF_xfree(f, H5FD_MEM_BTREE, H5AC_dxpl_id, hdr->cache_info.addr, (hsize_t)hdr->hdr_size) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to free v2 B-tree header") } /* end if */ /* Release B-tree header info */ if(H5B2__hdr_free(hdr) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to free v2 B-tree header info") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_hdr_dest() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_hdr_clear * * Purpose: Mark a B-tree header in memory as non-dirty. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_hdr_clear(H5F_t *f, H5B2_hdr_t *hdr, hbool_t destroy) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* * Check arguments. */ HDassert(hdr); /* Reset the dirty flag. */ hdr->cache_info.is_dirty = FALSE; if(destroy) if(H5B2__cache_hdr_dest(f, hdr) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree header") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_hdr_clear() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_hdr_size * * Purpose: Compute the size in bytes of a B-tree header * on disk, and return it in *size_ptr. On failure, * the value of *size_ptr is undefined. * * Return: SUCCEED (Can't fail) * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Feb 1 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_hdr_size(const H5F_t UNUSED *f, const H5B2_hdr_t *hdr, size_t *size_ptr) { FUNC_ENTER_STATIC_NOERR /* Check arguments */ HDassert(f); HDassert(hdr); HDassert(size_ptr); /* Set size value */ *size_ptr = hdr->hdr_size; FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B2__cache_hdr_size() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_internal_load * * Purpose: Loads a B-tree internal node from the disk. * * Return: Success: Pointer to a new B-tree internal node. * Failure: NULL * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static H5B2_internal_t * H5B2__cache_internal_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_udata) { H5B2_internal_cache_ud_t *udata = (H5B2_internal_cache_ud_t *)_udata; /* Pointer to user data */ H5B2_internal_t *internal = NULL; /* Internal node read */ const uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native record info */ H5B2_node_ptr_t *int_node_ptr; /* Pointer to node pointer info */ uint32_t stored_chksum; /* Stored metadata checksum value */ uint32_t computed_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ H5B2_internal_t *ret_value; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(udata); /* Allocate new internal node and reset cache info */ if(NULL == (internal = H5FL_MALLOC(H5B2_internal_t))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") HDmemset(&internal->cache_info, 0, sizeof(H5AC_info_t)); /* Set the B-tree header's file context for this operation */ udata->hdr->f = f; /* Increment ref. count on B-tree header */ if(H5B2__hdr_incr(udata->hdr) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTINC, NULL, "can't increment ref. count on B-tree header") /* Share B-tree information */ internal->hdr = udata->hdr; /* Read header from disk */ if(H5F_block_read(f, H5FD_MEM_BTREE, addr, udata->hdr->node_size, dxpl_id, udata->hdr->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree internal node") p = udata->hdr->page; /* Magic number */ if(HDmemcmp(p, H5B2_INT_MAGIC, (size_t)H5_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "wrong B-tree internal node signature") p += H5_SIZEOF_MAGIC; /* Version */ if(*p++ != H5B2_INT_VERSION) HGOTO_ERROR(H5E_BTREE, H5E_BADRANGE, NULL, "wrong B-tree internal node version") /* B-tree type */ if(*p++ != (uint8_t)udata->hdr->cls->id) HGOTO_ERROR(H5E_BTREE, H5E_BADTYPE, NULL, "incorrect B-tree type") /* Allocate space for the native keys in memory */ if(NULL == (internal->int_native = (uint8_t *)H5FL_FAC_MALLOC(udata->hdr->node_info[udata->depth].nat_rec_fac))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for B-tree internal native keys") /* Allocate space for the node pointers in memory */ if(NULL == (internal->node_ptrs = (H5B2_node_ptr_t *)H5FL_FAC_MALLOC(udata->hdr->node_info[udata->depth].node_ptr_fac))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for B-tree internal node pointers") /* Set the number of records in the leaf & it's depth */ internal->nrec = udata->nrec; internal->depth = udata->depth; /* Deserialize records for internal node */ native = internal->int_native; for(u = 0; u < internal->nrec; u++) { /* Decode record */ if((udata->hdr->cls->decode)(p, native, udata->hdr->cb_ctx) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTDECODE, NULL, "unable to decode B-tree record") /* Move to next record */ p += udata->hdr->rrec_size; native += udata->hdr->cls->nrec_size; } /* end for */ /* Deserialize node pointers for internal node */ int_node_ptr = internal->node_ptrs; for(u = 0; u < (unsigned)(internal->nrec + 1); u++) { /* Decode node pointer */ H5F_addr_decode(udata->f, (const uint8_t **)&p, &(int_node_ptr->addr)); UINT64DECODE_VAR(p, int_node_ptr->node_nrec, udata->hdr->max_nrec_size); if(udata->depth > 1) UINT64DECODE_VAR(p, int_node_ptr->all_nrec, udata->hdr->node_info[udata->depth - 1].cum_max_nrec_size) else int_node_ptr->all_nrec = int_node_ptr->node_nrec; /* Move to next node pointer */ int_node_ptr++; } /* end for */ /* Compute checksum on internal node */ computed_chksum = H5_checksum_metadata(udata->hdr->page, (size_t)(p - (const uint8_t *)udata->hdr->page), 0); /* Metadata checksum */ UINT32DECODE(p, stored_chksum); /* Sanity check parsing */ HDassert((size_t)(p - (const uint8_t *)udata->hdr->page) <= udata->hdr->node_size); /* Verify checksum */ if(stored_chksum != computed_chksum) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "incorrect metadata checksum for v2 internal node") /* Set return value */ ret_value = internal; done: if(!ret_value && internal) if(H5B2__internal_free(internal) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTFREE, NULL, "unable to destroy B-tree internal node") FUNC_LEAVE_NOAPI(ret_value) } /* H5B2__cache_internal_load() */ /*lint !e818 Can't make udata a pointer to const */ /*------------------------------------------------------------------------- * Function: H5B2__cache_internal_flush * * Purpose: Flushes a dirty B-tree internal node to disk. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 3 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_internal_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_internal_t *internal, unsigned UNUSED * flags_ptr) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(internal); HDassert(internal->hdr); if(internal->cache_info.is_dirty) { uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native record info */ H5B2_node_ptr_t *int_node_ptr; /* Pointer to node pointer info */ uint32_t metadata_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ /* Set the B-tree header's file context for this operation */ internal->hdr->f = f; p = internal->hdr->page; /* Magic number */ HDmemcpy(p, H5B2_INT_MAGIC, (size_t)H5_SIZEOF_MAGIC); p += H5_SIZEOF_MAGIC; /* Version # */ *p++ = H5B2_INT_VERSION; /* B-tree type */ *p++ = internal->hdr->cls->id; HDassert((size_t)(p - internal->hdr->page) == (H5B2_INT_PREFIX_SIZE - H5B2_SIZEOF_CHKSUM)); /* Serialize records for internal node */ native = internal->int_native; for(u = 0; u < internal->nrec; u++) { /* Encode record */ if((internal->hdr->cls->encode)(p, native, internal->hdr->cb_ctx) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, FAIL, "unable to encode B-tree record") /* Move to next record */ p += internal->hdr->rrec_size; native += internal->hdr->cls->nrec_size; } /* end for */ /* Serialize node pointers for internal node */ int_node_ptr = internal->node_ptrs; for(u = 0; u < (unsigned)(internal->nrec + 1); u++) { /* Encode node pointer */ H5F_addr_encode(f, &p, int_node_ptr->addr); UINT64ENCODE_VAR(p, int_node_ptr->node_nrec, internal->hdr->max_nrec_size); if(internal->depth > 1) UINT64ENCODE_VAR(p, int_node_ptr->all_nrec, internal->hdr->node_info[internal->depth - 1].cum_max_nrec_size); /* Move to next node pointer */ int_node_ptr++; } /* end for */ /* Compute metadata checksum */ metadata_chksum = H5_checksum_metadata(internal->hdr->page, (size_t)(p - internal->hdr->page), 0); /* Metadata checksum */ UINT32ENCODE(p, metadata_chksum); /* Write the B-tree internal node */ HDassert((size_t)(p - internal->hdr->page) <= internal->hdr->node_size); if(H5F_block_write(f, H5FD_MEM_BTREE, addr, internal->hdr->node_size, dxpl_id, internal->hdr->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree internal node to disk") internal->cache_info.is_dirty = FALSE; } /* end if */ if(destroy) if(H5B2__cache_internal_dest(f, internal) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree internal node") done: FUNC_LEAVE_NOAPI(ret_value) } /* H5B2__cache_internal_flush() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_internal_dest * * Purpose: Destroys a B-tree internal node in memory. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_internal_dest(H5F_t *f, H5B2_internal_t *internal) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(internal); HDassert(internal->hdr); /* If we're going to free the space on disk, the address must be valid */ HDassert(!internal->cache_info.free_file_space_on_destroy || H5F_addr_defined(internal->cache_info.addr)); /* Check for freeing file space for B-tree internal node */ if(internal->cache_info.free_file_space_on_destroy) { /* Release the space on disk */ /* (XXX: Nasty usage of internal DXPL value! -QAK) */ if(H5MF_xfree(f, H5FD_MEM_BTREE, H5AC_dxpl_id, internal->cache_info.addr, (hsize_t)internal->hdr->node_size) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to free v2 B-tree internal node") } /* end if */ /* Release v2 b-tree internal node */ if(H5B2__internal_free(internal) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to release v2 B-tree internal node") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_internal_dest() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_internal_clear * * Purpose: Mark a B-tree internal node in memory as non-dirty. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_internal_clear(H5F_t *f, H5B2_internal_t *internal, hbool_t destroy) { herr_t ret_value = SUCCEED; FUNC_ENTER_STATIC /* * Check arguments. */ HDassert(internal); /* Reset the dirty flag. */ internal->cache_info.is_dirty = FALSE; if(destroy) if(H5B2__cache_internal_dest(f, internal) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree internal node") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_internal_clear() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_internal_size * * Purpose: Compute the size in bytes of a B-tree internal node * on disk, and return it in *size_ptr. On failure, * the value of *size_ptr is undefined. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_internal_size(const H5F_t UNUSED *f, const H5B2_internal_t *internal, size_t *size_ptr) { FUNC_ENTER_STATIC_NOERR /* Check arguments */ HDassert(internal); HDassert(internal->hdr); HDassert(size_ptr); /* Set size value */ *size_ptr = internal->hdr->node_size; FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B2__cache_internal_size() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_leaf_load * * Purpose: Loads a B-tree leaf from the disk. * * Return: Success: Pointer to a new B-tree leaf node. * Failure: NULL * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static H5B2_leaf_t * H5B2__cache_leaf_load(H5F_t UNUSED *f, hid_t dxpl_id, haddr_t addr, void *_udata) { H5B2_leaf_cache_ud_t *udata = (H5B2_leaf_cache_ud_t *)_udata; H5B2_leaf_t *leaf = NULL; /* Pointer to lead node loaded */ const uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native keys */ uint32_t stored_chksum; /* Stored metadata checksum value */ uint32_t computed_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ H5B2_leaf_t *ret_value; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(udata); /* Allocate new leaf node and reset cache info */ if(NULL == (leaf = H5FL_MALLOC(H5B2_leaf_t))) HGOTO_ERROR(H5E_BTREE, H5E_CANTALLOC, NULL, "memory allocation failed") HDmemset(&leaf->cache_info, 0, sizeof(H5AC_info_t)); /* Set the B-tree header's file context for this operation */ udata->hdr->f = udata->f; /* Increment ref. count on B-tree header */ if(H5B2__hdr_incr(udata->hdr) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTINC, NULL, "can't increment ref. count on B-tree header") /* Share B-tree header information */ leaf->hdr = udata->hdr; /* Read header from disk */ if(H5F_block_read(udata->f, H5FD_MEM_BTREE, addr, udata->hdr->node_size, dxpl_id, udata->hdr->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree leaf node") p = udata->hdr->page; /* Magic number */ if(HDmemcmp(p, H5B2_LEAF_MAGIC, (size_t)H5_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "wrong B-tree leaf node signature") p += H5_SIZEOF_MAGIC; /* Version */ if(*p++ != H5B2_LEAF_VERSION) HGOTO_ERROR(H5E_BTREE, H5E_BADRANGE, NULL, "wrong B-tree leaf node version") /* B-tree type */ if(*p++ != (uint8_t)udata->hdr->cls->id) HGOTO_ERROR(H5E_BTREE, H5E_BADTYPE, NULL, "incorrect B-tree type") /* Allocate space for the native keys in memory */ if(NULL == (leaf->leaf_native = (uint8_t *)H5FL_FAC_MALLOC(udata->hdr->node_info[0].nat_rec_fac))) HGOTO_ERROR(H5E_BTREE, H5E_CANTALLOC, NULL, "memory allocation failed for B-tree leaf native keys") /* Set the number of records in the leaf */ leaf->nrec = udata->nrec; /* Deserialize records for leaf node */ native = leaf->leaf_native; for(u = 0; u < leaf->nrec; u++) { /* Decode record */ if((udata->hdr->cls->decode)(p, native, udata->hdr->cb_ctx) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, NULL, "unable to decode B-tree record") /* Move to next record */ p += udata->hdr->rrec_size; native += udata->hdr->cls->nrec_size; } /* end for */ /* Compute checksum on leaf node */ computed_chksum = H5_checksum_metadata(udata->hdr->page, (size_t)(p - (const uint8_t *)udata->hdr->page), 0); /* Metadata checksum */ UINT32DECODE(p, stored_chksum); /* Sanity check parsing */ HDassert((size_t)(p - (const uint8_t *)udata->hdr->page) <= udata->hdr->node_size); /* Verify checksum */ if(stored_chksum != computed_chksum) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "incorrect metadata checksum for v2 leaf node") /* Set return value */ ret_value = leaf; done: if(!ret_value && leaf) if(H5B2__leaf_free(leaf) < 0) HDONE_ERROR(H5E_BTREE, H5E_CANTFREE, NULL, "unable to destroy B-tree leaf node") FUNC_LEAVE_NOAPI(ret_value) } /* H5B2__cache_leaf_load() */ /*lint !e818 Can't make udata a pointer to const */ /*------------------------------------------------------------------------- * Function: H5B2__cache_leaf_flush * * Purpose: Flushes a dirty B-tree leaf node to disk. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_leaf_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_leaf_t *leaf, unsigned UNUSED * flags_ptr) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(leaf); HDassert(leaf->hdr); if(leaf->cache_info.is_dirty) { uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native keys */ uint32_t metadata_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ /* Set the B-tree header's file context for this operation */ leaf->hdr->f = f; p = leaf->hdr->page; /* magic number */ HDmemcpy(p, H5B2_LEAF_MAGIC, (size_t)H5_SIZEOF_MAGIC); p += H5_SIZEOF_MAGIC; /* version # */ *p++ = H5B2_LEAF_VERSION; /* b-tree type */ *p++ = leaf->hdr->cls->id; HDassert((size_t)(p - leaf->hdr->page) == (H5B2_LEAF_PREFIX_SIZE - H5B2_SIZEOF_CHKSUM)); /* Serialize records for leaf node */ native = leaf->leaf_native; for(u = 0; u < leaf->nrec; u++) { /* Encode record */ if((leaf->hdr->cls->encode)(p, native, leaf->hdr->cb_ctx) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, FAIL, "unable to encode B-tree record") /* Move to next record */ p += leaf->hdr->rrec_size; native += leaf->hdr->cls->nrec_size; } /* end for */ /* Compute metadata checksum */ metadata_chksum = H5_checksum_metadata(leaf->hdr->page, (size_t)(p - leaf->hdr->page), 0); /* Metadata checksum */ UINT32ENCODE(p, metadata_chksum); /* Write the B-tree leaf node */ HDassert((size_t)(p - leaf->hdr->page) <= leaf->hdr->node_size); if(H5F_block_write(f, H5FD_MEM_BTREE, addr, leaf->hdr->node_size, dxpl_id, leaf->hdr->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree leaf node to disk") leaf->cache_info.is_dirty = FALSE; } /* end if */ if(destroy) if(H5B2__cache_leaf_dest(f, leaf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree leaf node") done: FUNC_LEAVE_NOAPI(ret_value) } /* H5B2__cache_leaf_flush() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_leaf_dest * * Purpose: Destroys a B-tree leaf node in memory. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_leaf_dest(H5F_t *f, H5B2_leaf_t *leaf) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_STATIC /* Check arguments */ HDassert(f); HDassert(leaf); HDassert(leaf->hdr); /* If we're going to free the space on disk, the address must be valid */ HDassert(!leaf->cache_info.free_file_space_on_destroy || H5F_addr_defined(leaf->cache_info.addr)); /* Check for freeing file space for B-tree leaf node */ if(leaf->cache_info.free_file_space_on_destroy) { /* Release the space on disk */ /* (XXX: Nasty usage of internal DXPL value! -QAK) */ if(H5MF_xfree(f, H5FD_MEM_BTREE, H5AC_dxpl_id, leaf->cache_info.addr, (hsize_t)leaf->hdr->node_size) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to free v2 B-tree leaf node") } /* end if */ /* Destroy v2 b-tree leaf node */ if(H5B2__leaf_free(leaf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree leaf node") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_leaf_dest() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_leaf_clear * * Purpose: Mark a B-tree leaf node in memory as non-dirty. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_leaf_clear(H5F_t *f, H5B2_leaf_t *leaf, hbool_t destroy) { herr_t ret_value = SUCCEED; FUNC_ENTER_STATIC /* * Check arguments. */ HDassert(leaf); /* Reset the dirty flag. */ leaf->cache_info.is_dirty = FALSE; if(destroy) if(H5B2__cache_leaf_dest(f, leaf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree leaf node") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2__cache_leaf_clear() */ /*------------------------------------------------------------------------- * Function: H5B2__cache_leaf_size * * Purpose: Compute the size in bytes of a B-tree leaf node * on disk, and return it in *size_ptr. On failure, * the value of *size_ptr is undefined. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2__cache_leaf_size(const H5F_t UNUSED *f, const H5B2_leaf_t *leaf, size_t *size_ptr) { FUNC_ENTER_STATIC_NOERR /* check arguments */ HDassert(leaf); HDassert(leaf->hdr); HDassert(size_ptr); /* Set size value */ *size_ptr = leaf->hdr->node_size; FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B2__cache_leaf_size() */