/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /*------------------------------------------------------------------------- * * Created: H5B2cache.c * Jan 31 2005 * Quincey Koziol * * Purpose: Implement v2 B-tree metadata cache methods. * *------------------------------------------------------------------------- */ /****************/ /* Module Setup */ /****************/ #define H5B2_PACKAGE /*suppress error about including H5B2pkg */ /***********/ /* Headers */ /***********/ #include "H5private.h" /* Generic Functions */ #include "H5B2pkg.h" /* v2 B-trees */ #include "H5Eprivate.h" /* Error handling */ /****************/ /* Local Macros */ /****************/ /* B-tree format version #'s */ #define H5B2_HDR_VERSION 0 /* Header */ #define H5B2_INT_VERSION 0 /* Internal node */ #define H5B2_LEAF_VERSION 0 /* Leaf node */ /******************/ /* Local Typedefs */ /******************/ /********************/ /* Package Typedefs */ /********************/ /********************/ /* Local Prototypes */ /********************/ /* Metadata cache callbacks */ static H5B2_t *H5B2_cache_hdr_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void *udata); static herr_t H5B2_cache_hdr_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_t *b, unsigned UNUSED * flags_ptr); static herr_t H5B2_cache_hdr_clear(H5F_t *f, H5B2_t *b, hbool_t destroy); static herr_t H5B2_cache_hdr_size(const H5F_t *f, const H5B2_t *bt, size_t *size_ptr); static H5B2_internal_t *H5B2_cache_internal_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_nrec, void *_shared); static herr_t H5B2_cache_internal_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_internal_t *i, unsigned UNUSED * flags_ptr); static herr_t H5B2_cache_internal_clear(H5F_t *f, H5B2_internal_t *i, hbool_t destroy); static herr_t H5B2_cache_internal_size(const H5F_t *f, const H5B2_internal_t *i, size_t *size_ptr); static H5B2_leaf_t *H5B2_cache_leaf_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_nrec, void *_shared); static herr_t H5B2_cache_leaf_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_leaf_t *l, unsigned UNUSED * flags_ptr); static herr_t H5B2_cache_leaf_clear(H5F_t *f, H5B2_leaf_t *l, hbool_t destroy); static herr_t H5B2_cache_leaf_size(const H5F_t *f, const H5B2_leaf_t *l, size_t *size_ptr); /*********************/ /* Package Variables */ /*********************/ /* H5B2 inherits cache-like properties from H5AC */ const H5AC_class_t H5AC_BT2_HDR[1] = {{ H5AC_BT2_HDR_ID, (H5AC_load_func_t)H5B2_cache_hdr_load, (H5AC_flush_func_t)H5B2_cache_hdr_flush, (H5AC_dest_func_t)H5B2_cache_hdr_dest, (H5AC_clear_func_t)H5B2_cache_hdr_clear, (H5AC_size_func_t)H5B2_cache_hdr_size, }}; /* H5B2 inherits cache-like properties from H5AC */ const H5AC_class_t H5AC_BT2_INT[1] = {{ H5AC_BT2_INT_ID, (H5AC_load_func_t)H5B2_cache_internal_load, (H5AC_flush_func_t)H5B2_cache_internal_flush, (H5AC_dest_func_t)H5B2_cache_internal_dest, (H5AC_clear_func_t)H5B2_cache_internal_clear, (H5AC_size_func_t)H5B2_cache_internal_size, }}; /* H5B2 inherits cache-like properties from H5AC */ const H5AC_class_t H5AC_BT2_LEAF[1] = {{ H5AC_BT2_LEAF_ID, (H5AC_load_func_t)H5B2_cache_leaf_load, (H5AC_flush_func_t)H5B2_cache_leaf_flush, (H5AC_dest_func_t)H5B2_cache_leaf_dest, (H5AC_clear_func_t)H5B2_cache_leaf_clear, (H5AC_size_func_t)H5B2_cache_leaf_size, }}; /*****************************/ /* Library Private Variables */ /*****************************/ /*******************/ /* Local Variables */ /*******************/ /* Declare a free list to manage B-tree header data to/from disk */ H5FL_BLK_DEFINE_STATIC(header_block); /*------------------------------------------------------------------------- * Function: H5B2_cache_hdr_load * * Purpose: Loads a B-tree header from the disk. * * Return: Success: Pointer to a new B-tree. * * Failure: NULL * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static H5B2_t * H5B2_cache_hdr_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_type, void UNUSED *udata) { const H5B2_class_t *type = (const H5B2_class_t *) _type; /* Type of B-tree */ unsigned depth; /* Depth of B-tree */ size_t node_size, rrec_size; /* Size info for B-tree */ uint8_t split_percent, merge_percent; /* Split & merge %s for B-tree */ H5B2_t *bt2 = NULL; /* B-tree info */ size_t size; /* Header size */ uint32_t stored_chksum; /* Stored metadata checksum value */ uint32_t computed_chksum; /* Computed metadata checksum value */ uint8_t *buf = NULL; /* Temporary buffer */ uint8_t *p; /* Pointer into raw data buffer */ H5B2_t *ret_value; /* Return value */ FUNC_ENTER_NOAPI(H5B2_cache_hdr_load, NULL) /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(type); /* Allocate space for the B-tree data structure */ if(NULL == (bt2 = H5FL_MALLOC(H5B2_t))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") HDmemset(&bt2->cache_info, 0, sizeof(H5AC_info_t)); /* Compute the size of the B-tree header on disk */ size = H5B2_HEADER_SIZE(f); /* Allocate temporary buffer */ if((buf = H5FL_BLK_MALLOC(header_block, size)) == NULL) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") /* Read header from disk */ if(H5F_block_read(f, H5FD_MEM_BTREE, addr, size, dxpl_id, buf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree header") p = buf; /* Magic number */ if(HDmemcmp(p, H5B2_HDR_MAGIC, (size_t)H5B2_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree header signature") p += H5B2_SIZEOF_MAGIC; /* Version */ if(*p++ != H5B2_HDR_VERSION) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree header version") /* B-tree type */ if(*p++ != (uint8_t)type->id) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "incorrect B-tree type") /* Node size (in bytes) */ UINT32DECODE(p, node_size); /* Raw key size (in bytes) */ UINT16DECODE(p, rrec_size); /* Depth of tree */ UINT16DECODE(p, depth); /* Split & merge %s */ split_percent = *p++; merge_percent = *p++; /* Root node pointer */ H5F_addr_decode(f, (const uint8_t **)&p, &(bt2->root.addr)); UINT16DECODE(p, bt2->root.node_nrec); H5F_DECODE_LENGTH(f, p, bt2->root.all_nrec); /* Metadata checksum */ UINT32DECODE(p, stored_chksum); /* Sanity check */ HDassert((size_t)(p - buf) == size); /* Compute checksum on entire header */ computed_chksum = H5_checksum_metadata(buf, (size - H5B2_SIZEOF_CHKSUM), 0); /* Verify checksum */ if(stored_chksum != computed_chksum) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "incorrect metadata checksum for v2 B-tree header") /* Initialize shared B-tree info */ if(H5B2_shared_init(f, bt2, type, depth, node_size, rrec_size, split_percent, merge_percent) < 0) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "can't create shared B-tree info") /* Set return value */ ret_value = bt2; done: if(buf) (void)H5FL_BLK_FREE(header_block, buf); if(!ret_value && bt2) (void)H5B2_cache_hdr_dest(f, bt2); FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2_cache_hdr_load() */ /*lint !e818 Can't make udata a pointer to const */ /*------------------------------------------------------------------------- * Function: H5B2_cache_hdr_flush * * Purpose: Flushes a dirty B-tree header to disk. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * Changes: JRM -- 8/21/06 * Added the flags_ptr parameter. This parameter exists to * allow the flush routine to report to the cache if the * entry is resized or renamed as a result of the flush. * *flags_ptr is set to H5C_CALLBACK__NO_FLAGS_SET on entry. * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_hdr_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_t *bt2, unsigned UNUSED * flags_ptr) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_cache_hdr_flush, FAIL) /* check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(bt2); if (bt2->cache_info.is_dirty) { H5B2_shared_t *shared; /* Shared B-tree information */ uint8_t *buf; /* Temporary raw data buffer */ uint8_t *p; /* Pointer into raw data buffer */ size_t size; /* Header size on disk */ uint32_t metadata_chksum; /* Computed metadata checksum value */ /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(bt2->shared); HDassert(shared); /* Compute the size of the B-tree header on disk */ size = H5B2_HEADER_SIZE(f); /* Allocate temporary buffer */ if((buf = H5FL_BLK_MALLOC(header_block, size)) == NULL) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed") p = buf; /* Magic number */ HDmemcpy(p, H5B2_HDR_MAGIC, (size_t)H5B2_SIZEOF_MAGIC); p += H5B2_SIZEOF_MAGIC; /* Version # */ *p++ = H5B2_HDR_VERSION; /* B-tree type */ *p++ = shared->type->id; /* Node size (in bytes) */ UINT32ENCODE(p, shared->node_size); /* Raw key size (in bytes) */ UINT16ENCODE(p, shared->rrec_size); /* Depth of tree */ UINT16ENCODE(p, shared->depth); /* Split & merge %s */ *p++ = shared->split_percent; *p++ = shared->merge_percent; /* Root node pointer */ H5F_addr_encode(f, &p, bt2->root.addr); UINT16ENCODE(p, bt2->root.node_nrec); H5F_ENCODE_LENGTH(f, p, bt2->root.all_nrec); /* Compute metadata checksum */ metadata_chksum = H5_checksum_metadata(buf, (size - H5B2_SIZEOF_CHKSUM), 0); /* Metadata checksum */ UINT32ENCODE(p, metadata_chksum); /* Write the B-tree header. */ HDassert((size_t)(p - buf) == size); if(H5F_block_write(f, H5FD_MEM_BTREE, addr, size, dxpl_id, buf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree header to disk") (void)H5FL_BLK_FREE(header_block, buf); bt2->cache_info.is_dirty = FALSE; } /* end if */ if(destroy) if(H5B2_cache_hdr_dest(f, bt2) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree header") done: FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_cache_hdr_flush() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_hdr_dest * * Purpose: Destroys a B-tree header in memory. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ /* ARGSUSED */ herr_t H5B2_cache_hdr_dest(H5F_t UNUSED *f, H5B2_t *bt2) { FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_cache_hdr_dest) /* * Check arguments. */ HDassert(bt2); /* Decrement reference count on shared B-tree info */ if(bt2->shared) H5RC_DEC(bt2->shared); /* Free B-tree header info */ H5FL_FREE(H5B2_t, bt2); FUNC_LEAVE_NOAPI(SUCCEED) } /* end H5B2_cache_hdr_dest() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_hdr_clear * * Purpose: Mark a B-tree header in memory as non-dirty. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_hdr_clear(H5F_t *f, H5B2_t *bt2, hbool_t destroy) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5B2_cache_hdr_clear) /* * Check arguments. */ HDassert(bt2); /* Reset the dirty flag. */ bt2->cache_info.is_dirty = FALSE; if(destroy) if(H5B2_cache_hdr_dest(f, bt2) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree header") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2_cache_hdr_clear() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_hdr_size * * Purpose: Compute the size in bytes of a B-tree header * on disk, and return it in *size_ptr. On failure, * the value of *size_ptr is undefined. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 1 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_hdr_size(const H5F_t *f, const H5B2_t UNUSED *bt2, size_t *size_ptr) { FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_cache_hdr_size) /* check arguments */ HDassert(f); HDassert(size_ptr); /* Set size value */ *size_ptr = H5B2_HEADER_SIZE(f); FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B2_cache_hdr_size() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_internal_load * * Purpose: Loads a B-tree internal node from the disk. * * Return: Success: Pointer to a new B-tree internal node. * * Failure: NULL * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static H5B2_internal_t * H5B2_cache_internal_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_udata, void UNUSED *udata2) { const H5B2_int_load_ud1_t *udata = (const H5B2_int_load_ud1_t *)_udata; /* Pointer to user data */ H5B2_shared_t *shared; /* Shared B-tree information */ H5B2_internal_t *internal = NULL; /* Internal node read */ uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native record info */ H5B2_node_ptr_t *int_node_ptr; /* Pointer to node pointer info */ uint32_t stored_chksum; /* Stored metadata checksum value */ uint32_t computed_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ H5B2_internal_t *ret_value; /* Return value */ FUNC_ENTER_NOAPI(H5B2_cache_internal_load, NULL) /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(udata); /* Allocate new internal node and reset cache info */ if(NULL == (internal = H5FL_MALLOC(H5B2_internal_t))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") HDmemset(&internal->cache_info, 0, sizeof(H5AC_info_t)); /* Share common B-tree information */ internal->shared = udata->bt2_shared; H5RC_INC(internal->shared); /* Get the pointer to the shared B-tree info */ shared=(H5B2_shared_t *)H5RC_GET_OBJ(internal->shared); HDassert(shared); /* Read header from disk */ if(H5F_block_read(f, H5FD_MEM_BTREE, addr, shared->node_size, dxpl_id, shared->page)<0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree internal node") p = shared->page; /* Magic number */ if(HDmemcmp(p, H5B2_INT_MAGIC, (size_t)H5B2_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree internal node signature") p += H5B2_SIZEOF_MAGIC; /* Version */ if(*p++ != H5B2_INT_VERSION) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree internal node version") /* B-tree type */ if (*p++ != (uint8_t)shared->type->id) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "incorrect B-tree type") /* Allocate space for the native keys in memory */ if((internal->int_native = (uint8_t *)H5FL_FAC_MALLOC(shared->node_info[udata->depth].nat_rec_fac)) == NULL) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for B-tree internal native keys") /* Allocate space for the node pointers in memory */ if((internal->node_ptrs = (H5B2_node_ptr_t *)H5FL_FAC_MALLOC(shared->node_info[udata->depth].node_ptr_fac)) == NULL) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for B-tree internal node pointers") /* Set the number of records in the leaf & it's depth */ internal->nrec = udata->nrec; internal->depth = udata->depth; /* Deserialize records for internal node */ native = internal->int_native; for(u = 0; u < internal->nrec; u++) { /* Decode record */ if((shared->type->decode)(f, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTDECODE, NULL, "unable to decode B-tree record") /* Move to next record */ p += shared->rrec_size; native += shared->type->nrec_size; } /* end for */ /* Deserialize node pointers for internal node */ int_node_ptr = internal->node_ptrs; for(u = 0; u < internal->nrec + 1; u++) { /* Decode node pointer */ H5F_addr_decode(f, (const uint8_t **)&p, &(int_node_ptr->addr)); UINT64DECODE_VAR(p, int_node_ptr->node_nrec, shared->max_nrec_size); if(udata->depth > 1) UINT64DECODE_VAR(p, int_node_ptr->all_nrec, shared->node_info[udata->depth - 1].cum_max_nrec_size) else int_node_ptr->all_nrec = int_node_ptr->node_nrec; /* Move to next node pointer */ int_node_ptr++; } /* end for */ /* Compute checksum on internal node */ computed_chksum = H5_checksum_metadata(shared->page, (size_t)(p - shared->page), 0); /* Metadata checksum */ UINT32DECODE(p, stored_chksum); /* Sanity check parsing */ HDassert((size_t)(p - shared->page) <= shared->node_size); /* Verify checksum */ if(stored_chksum != computed_chksum) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "incorrect metadata checksum for v2 internal node") /* Set return value */ ret_value = internal; done: if(!ret_value && internal) (void)H5B2_cache_internal_dest(f, internal); FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_cache_internal_load() */ /*lint !e818 Can't make udata a pointer to const */ /*------------------------------------------------------------------------- * Function: H5B2_cache_internal_flush * * Purpose: Flushes a dirty B-tree internal node to disk. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 3 2005 * Changes: JRM -- 8/21/06 * Added the flags_ptr parameter. This parameter exists to * allow the flush routine to report to the cache if the * entry is resized or renamed as a result of the flush. * *flags_ptr is set to H5C_CALLBACK__NO_FLAGS_SET on entry. * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_internal_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_internal_t *internal, unsigned UNUSED * flags_ptr) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_cache_internal_flush, FAIL) /* check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(internal); if(internal->cache_info.is_dirty) { H5B2_shared_t *shared; /* Shared B-tree information */ uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native record info */ H5B2_node_ptr_t *int_node_ptr; /* Pointer to node pointer info */ uint32_t metadata_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(internal->shared); HDassert(shared); p = shared->page; /* Magic number */ HDmemcpy(p, H5B2_INT_MAGIC, (size_t)H5B2_SIZEOF_MAGIC); p += H5B2_SIZEOF_MAGIC; /* Version # */ *p++ = H5B2_INT_VERSION; /* B-tree type */ *p++ = shared->type->id; /* Serialize records for internal node */ native = internal->int_native; for(u = 0; u < internal->nrec; u++) { /* Encode record */ if((shared->type->encode)(f, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, FAIL, "unable to encode B-tree record") /* Move to next record */ p += shared->rrec_size; native += shared->type->nrec_size; } /* end for */ /* Serialize node pointers for internal node */ int_node_ptr = internal->node_ptrs; for(u = 0; u < internal->nrec + 1; u++) { /* Encode node pointer */ H5F_addr_encode(f, &p, int_node_ptr->addr); UINT64ENCODE_VAR(p, int_node_ptr->node_nrec, shared->max_nrec_size); if(internal->depth > 1) UINT64ENCODE_VAR(p, int_node_ptr->all_nrec, shared->node_info[internal->depth - 1].cum_max_nrec_size); /* Move to next node pointer */ int_node_ptr++; } /* end for */ /* Compute metadata checksum */ metadata_chksum = H5_checksum_metadata(shared->page, (size_t)(p - shared->page), 0); /* Metadata checksum */ UINT32ENCODE(p, metadata_chksum); /* Write the B-tree internal node */ HDassert((size_t)(p - shared->page) <= shared->node_size); if(H5F_block_write(f, H5FD_MEM_BTREE, addr, shared->node_size, dxpl_id, shared->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree internal node to disk") internal->cache_info.is_dirty = FALSE; } /* end if */ if(destroy) if(H5B2_cache_internal_dest(f, internal) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree internal node") done: FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_cache_internal_flush() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_internal_dest * * Purpose: Destroys a B-tree internal node in memory. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ /* ARGSUSED */ herr_t H5B2_cache_internal_dest(H5F_t UNUSED *f, H5B2_internal_t *internal) { H5B2_shared_t *shared; /* Shared B-tree information */ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_cache_internal_dest) /* * Check arguments. */ HDassert(internal); /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(internal->shared); HDassert(shared); /* Release internal node's native key buffer */ if(internal->int_native) H5FL_FAC_FREE(shared->node_info[internal->depth].nat_rec_fac, internal->int_native); /* Release internal node's node pointer buffer */ if(internal->node_ptrs) H5FL_FAC_FREE(shared->node_info[internal->depth].node_ptr_fac, internal->node_ptrs); /* Decrement reference count on shared B-tree info */ if(internal->shared) H5RC_DEC(internal->shared); /* Free B-tree internal node info */ H5FL_FREE(H5B2_internal_t, internal); FUNC_LEAVE_NOAPI(SUCCEED) } /* end H5B2_cache_internal_dest() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_internal_clear * * Purpose: Mark a B-tree internal node in memory as non-dirty. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_internal_clear(H5F_t *f, H5B2_internal_t *internal, hbool_t destroy) { herr_t ret_value = SUCCEED; FUNC_ENTER_NOAPI_NOINIT(H5B2_cache_internal_clear) /* * Check arguments. */ HDassert(internal); /* Reset the dirty flag. */ internal->cache_info.is_dirty = FALSE; if(destroy) if(H5B2_cache_internal_dest(f, internal) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree internal node") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2_cache_internal_clear() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_internal_size * * Purpose: Compute the size in bytes of a B-tree internal node * on disk, and return it in *size_ptr. On failure, * the value of *size_ptr is undefined. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_internal_size(const H5F_t UNUSED *f, const H5B2_internal_t *internal, size_t *size_ptr) { H5B2_shared_t *shared; /* Shared B-tree information */ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_cache_internal_size) /* check arguments */ HDassert(internal); HDassert(size_ptr); /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(internal->shared); HDassert(shared); /* Set size value */ *size_ptr = shared->node_size; FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B2_cache_internal_size() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_leaf_load * * Purpose: Loads a B-tree leaf from the disk. * * Return: Success: Pointer to a new B-tree leaf node. * * Failure: NULL * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static H5B2_leaf_t * H5B2_cache_leaf_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_nrec, void *_bt2_shared) { const unsigned *nrec = (const unsigned *)_nrec; H5RC_t *bt2_shared = (H5RC_t *)_bt2_shared; /* Shared B-tree information */ H5B2_shared_t *shared; /* Shared B-tree information */ H5B2_leaf_t *leaf = NULL; /* Pointer to lead node loaded */ uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native keys */ uint32_t stored_chksum; /* Stored metadata checksum value */ uint32_t computed_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ H5B2_leaf_t *ret_value; /* Return value */ FUNC_ENTER_NOAPI(H5B2_cache_leaf_load, NULL) /* Check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(bt2_shared); if(NULL == (leaf = H5FL_MALLOC(H5B2_leaf_t))) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") HDmemset(&leaf->cache_info, 0, sizeof(H5AC_info_t)); /* Share common B-tree information */ leaf->shared = bt2_shared; H5RC_INC(leaf->shared); /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(leaf->shared); HDassert(shared); /* Read header from disk */ if(H5F_block_read(f, H5FD_MEM_BTREE, addr, shared->node_size, dxpl_id, shared->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_READERROR, NULL, "can't read B-tree leaf node") p = shared->page; /* Magic number */ if(HDmemcmp(p, H5B2_LEAF_MAGIC, (size_t)H5B2_SIZEOF_MAGIC)) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree leaf node signature") p += H5B2_SIZEOF_MAGIC; /* Version */ if(*p++ != H5B2_LEAF_VERSION) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "wrong B-tree leaf node version") /* B-tree type */ if(*p++ != (uint8_t)shared->type->id) HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, NULL, "incorrect B-tree type") /* Allocate space for the native keys in memory */ if((leaf->leaf_native = (uint8_t *)H5FL_FAC_MALLOC(shared->node_info[0].nat_rec_fac)) == NULL) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for B-tree leaf native keys") /* Set the number of records in the leaf */ leaf->nrec = *nrec; /* Deserialize records for leaf node */ native = leaf->leaf_native; for(u = 0; u < leaf->nrec; u++) { /* Decode record */ if((shared->type->decode)(f, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, NULL, "unable to decode B-tree record") /* Move to next record */ p += shared->rrec_size; native += shared->type->nrec_size; } /* end for */ /* Compute checksum on internal node */ computed_chksum = H5_checksum_metadata(shared->page, (size_t)(p - shared->page), 0); /* Metadata checksum */ UINT32DECODE(p, stored_chksum); /* Sanity check parsing */ HDassert((size_t)(p - shared->page) <= shared->node_size); /* Verify checksum */ if(stored_chksum != computed_chksum) HGOTO_ERROR(H5E_BTREE, H5E_BADVALUE, NULL, "incorrect metadata checksum for v2 leaf node") /* Set return value */ ret_value = leaf; done: if(!ret_value && leaf) (void)H5B2_cache_leaf_dest(f,leaf); FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_cache_leaf_load() */ /*lint !e818 Can't make udata a pointer to const */ /*------------------------------------------------------------------------- * Function: H5B2_cache_leaf_flush * * Purpose: Flushes a dirty B-tree leaf node to disk. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * * Changes: JRM -- 8/21/06 * Added the flags_ptr parameter. This parameter exists to * allow the flush routine to report to the cache if the * entry is resized or renamed as a result of the flush. * *flags_ptr is set to H5C_CALLBACK__NO_FLAGS_SET on entry. * * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_leaf_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5B2_leaf_t *leaf, unsigned UNUSED * flags_ptr) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5B2_cache_leaf_flush, FAIL) /* check arguments */ HDassert(f); HDassert(H5F_addr_defined(addr)); HDassert(leaf); if(leaf->cache_info.is_dirty) { H5B2_shared_t *shared; /* Shared B-tree information */ uint8_t *p; /* Pointer into raw data buffer */ uint8_t *native; /* Pointer to native keys */ uint32_t metadata_chksum; /* Computed metadata checksum value */ unsigned u; /* Local index variable */ /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(leaf->shared); HDassert(shared); p = shared->page; /* magic number */ HDmemcpy(p, H5B2_LEAF_MAGIC, (size_t)H5B2_SIZEOF_MAGIC); p += H5B2_SIZEOF_MAGIC; /* version # */ *p++ = H5B2_LEAF_VERSION; /* b-tree type */ *p++ = shared->type->id; /* Serialize records for leaf node */ native = leaf->leaf_native; for(u = 0; u < leaf->nrec; u++) { /* Encode record */ if((shared->type->encode)(f, p, native) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTENCODE, FAIL, "unable to encode B-tree record") /* Move to next record */ p += shared->rrec_size; native += shared->type->nrec_size; } /* end for */ /* Compute metadata checksum */ metadata_chksum = H5_checksum_metadata(shared->page, (size_t)(p - shared->page), 0); /* Metadata checksum */ UINT32ENCODE(p, metadata_chksum); /* Write the B-tree leaf node */ HDassert((size_t)(p - shared->page) <= shared->node_size); if(H5F_block_write(f, H5FD_MEM_BTREE, addr, shared->node_size, dxpl_id, shared->page) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFLUSH, FAIL, "unable to save B-tree leaf node to disk") leaf->cache_info.is_dirty = FALSE; } /* end if */ if(destroy) if(H5B2_cache_leaf_dest(f, leaf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree leaf node") done: FUNC_LEAVE_NOAPI(ret_value) } /* H5B2_cache_leaf_flush() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_leaf_dest * * Purpose: Destroys a B-tree leaf node in memory. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ /* ARGSUSED */ herr_t H5B2_cache_leaf_dest(H5F_t UNUSED *f, H5B2_leaf_t *leaf) { H5B2_shared_t *shared; /* Shared B-tree information */ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_cache_leaf_dest) /* * Check arguments. */ HDassert(leaf); /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(leaf->shared); HDassert(shared); /* Release leaf's native key buffer */ if(leaf->leaf_native) H5FL_FAC_FREE(shared->node_info[0].nat_rec_fac, leaf->leaf_native); /* Decrement reference count on shared B-tree info */ if(leaf->shared) H5RC_DEC(leaf->shared); /* Free B-tree leaf node info */ H5FL_FREE(H5B2_leaf_t,leaf); FUNC_LEAVE_NOAPI(SUCCEED) } /* end H5B2_cache_leaf_dest() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_leaf_clear * * Purpose: Mark a B-tree leaf node in memory as non-dirty. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_leaf_clear(H5F_t *f, H5B2_leaf_t *leaf, hbool_t destroy) { herr_t ret_value = SUCCEED; FUNC_ENTER_NOAPI_NOINIT(H5B2_cache_leaf_clear) /* * Check arguments. */ HDassert(leaf); /* Reset the dirty flag. */ leaf->cache_info.is_dirty = FALSE; if(destroy) if(H5B2_cache_leaf_dest(f, leaf) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to destroy B-tree leaf node") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5B2_cache_leaf_clear() */ /*------------------------------------------------------------------------- * Function: H5B2_cache_leaf_size * * Purpose: Compute the size in bytes of a B-tree leaf node * on disk, and return it in *size_ptr. On failure, * the value of *size_ptr is undefined. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * koziol@ncsa.uiuc.edu * Feb 2 2005 * *------------------------------------------------------------------------- */ static herr_t H5B2_cache_leaf_size(const H5F_t UNUSED *f, const H5B2_leaf_t *leaf, size_t *size_ptr) { H5B2_shared_t *shared; /* Shared B-tree information */ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_cache_leaf_size) /* check arguments */ HDassert(leaf); HDassert(size_ptr); /* Get the pointer to the shared B-tree info */ shared = (H5B2_shared_t *)H5RC_GET_OBJ(leaf->shared); HDassert(shared); /* Set size value */ *size_ptr = shared->node_size; FUNC_LEAVE_NOAPI(SUCCEED) } /* H5B2_cache_leaf_size() */