/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * Programmer: Quincey Koziol * Saturday, September 12, 2015 * * Purpose: This file contains declarations which define macros for the * H5G package. Including this header means that the source file * is part of the H5G package. */ #ifndef H5Gmodule_H #define H5Gmodule_H /* Define the proper control macros for the generic FUNC_ENTER/LEAVE and error * reporting macros. */ #define H5G_MODULE #define H5_MY_PKG H5G #define H5_MY_PKG_ERR H5E_SYM #define H5_MY_PKG_INIT YES /** \defgroup H5G H5G * * Use the functions in this module to manage HDF5 groups. * * * * * * * * * * * *
CreateRead
* \snippet{lineno} H5G_examples.c create * * \snippet{lineno} H5G_examples.c read *
UpdateDelete
* \snippet{lineno} H5G_examples.c update * * \snippet{lineno} H5G_examples.c delete *
* * \details \Bold{Groups in HDF5:} A group associates names with objects and * provides a mechanism for mapping a name to an object. Since all * objects appear in at least one group (with the possible exception of * the root object) and since objects can have names in more than one * group, the set of all objects in an HDF5 file is a directed * graph. The internal nodes (nodes with out-degree greater than zero) * must be groups while the leaf nodes (nodes with out-degree zero) are * either empty groups or objects of some other type. Exactly one * object in every non-empty file is the root object. The root object * always has a positive in-degree because it is pointed to by the file * super block. * * \Bold{Locating objects in the HDF5 file hierarchy:} An object name * consists of one or more components separated from one another by * slashes. An absolute name begins with a slash and the object is * located by looking for the first component in the root object, then * looking for the second component in the first object, etc., until * the entire name is traversed. A relative name does not begin with a * slash and the traversal begins at the location specified by the * create or access function. * * \Bold{Group implementations in HDF5:} The original HDF5 group * implementation provided a single indexed structure for link * storage. A new group implementation, in HDF5 Release 1.8.0, enables * more efficient compact storage for very small groups, improved link * indexing for large groups, and other advanced features. * * \li The \Emph{original indexed} format remains the default. Links * are stored in a B-tree in the group’s local heap. * \li Groups created in the new \Emph{compact-or-indexed} format, the * implementation introduced with Release 1.8.0, can be tuned for * performance, switching between the compact and indexed formats * at thresholds set in the user application. * - The \Emph{compact} format will conserve file space and processing * overhead when working with small groups and is particularly * valuable when a group contains no links. Links are stored * as a list of messages in the group’s header. * - The \Emph{indexed} format will yield improved * performance when working with large groups, e.g., groups * containing thousands to millions of members. Links are stored in * a fractal heap and indexed with an improved B-tree. * \li The new implementation also enables the use of link names consisting of * non-ASCII character sets (see H5Pset_char_encoding()) and is * required for all link types other than hard or soft links, e.g., * external and user-defined links (see the \ref H5L APIs). * * The original group structure and the newer structures are not * directly interoperable. By default, a group will be created in the * original indexed format. An existing group can be changed to a * compact-or-indexed format if the need arises; there is no capability * to change back. As stated above, once in the compact-or-indexed * format, a group can switch between compact and indexed as needed. * * Groups will be initially created in the compact-or-indexed format * only when one or more of the following conditions is met: * \li The low version bound value of the library version bounds property * has been set to Release 1.8.0 or later in the file access property * list (see H5Pset_libver_bounds()). Currently, that would require an * H5Pset_libver_bounds() call with the low parameter set to * #H5F_LIBVER_LATEST.\n When this property is set for an HDF5 file, * all objects in the file will be created using the latest available * format; no effort will be made to create a file that can be read by * older libraries. * \li The creation order tracking property, #H5P_CRT_ORDER_TRACKED, has been * set in the group creation property list (see H5Pset_link_creation_order()). * * An existing group, currently in the original indexed format, will be * converted to the compact-or-indexed format upon the occurrence of * any of the following events: * \li An external or user-defined link is inserted into the group. * \li A link named with a string composed of non-ASCII characters is * inserted into the group. * * The compact-or-indexed format offers performance improvements that * will be most notable at the extremes, i.e., in groups with zero * members and in groups with tens of thousands of members. But * measurable differences may sometimes appear at a threshold as low as * eight group members. Since these performance thresholds and criteria * differ from application to application, tunable settings are * provided to govern the switch between the compact and indexed * formats (see H5Pset_link_phase_change()). Optimal thresholds will * depend on the application and the operating environment. * * Future versions of HDF5 will retain the ability to create, read, * write, and manipulate all groups stored in either the original * indexed format or the compact-or-indexed format. * */ #endif /* H5Gmodule_H */