/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /*------------------------------------------------------------------------- * * Created: H5HFhuge.c * Aug 7 2006 * Quincey Koziol * * Purpose: Routines for "huge" objects in fractal heap * *------------------------------------------------------------------------- */ /****************/ /* Module Setup */ /****************/ #define H5HF_PACKAGE /*suppress error about including H5HFpkg */ /***********/ /* Headers */ /***********/ #include "H5private.h" /* Generic Functions */ #include "H5Eprivate.h" /* Error handling */ #include "H5HFpkg.h" /* Fractal heaps */ #include "H5MFprivate.h" /* File memory management */ /****************/ /* Local Macros */ /****************/ /* v2 B-tree creation macros */ #define H5HF_HUGE_BT2_NODE_SIZE 512 #define H5HF_HUGE_BT2_SPLIT_PERC 100 #define H5HF_HUGE_BT2_MERGE_PERC 40 /******************/ /* Local Typedefs */ /******************/ /********************/ /* Package Typedefs */ /********************/ /********************/ /* Local Prototypes */ /********************/ /* local v2 B-tree operations */ static herr_t H5HF_huge_bt2_create(H5HF_hdr_t *hdr, hid_t dxpl_id); /* v2 B-tree function callbacks (in H5HFbtree2.c) */ herr_t H5HF_huge_bt2_found(const void *nrecord, void *op_data); herr_t H5HF_huge_bt2_remove(const void *nrecord, void *op_data); /*********************/ /* Package Variables */ /*********************/ /* The v2 B-tree class for tracking huge objects */ H5_DLLVAR const H5B2_class_t H5HF_BTREE2[1]; /*****************************/ /* Library Private Variables */ /*****************************/ /*******************/ /* Local Variables */ /*******************/ /*------------------------------------------------------------------------- * Function: H5HF_huge_bt2_create * * Purpose: Create the v2 B-tree for tracking the huge objects in the heap * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 7 2006 * *------------------------------------------------------------------------- */ static herr_t H5HF_huge_bt2_create(H5HF_hdr_t *hdr, hid_t dxpl_id) { size_t rrec_size; /* Size of 'raw' records on disk */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5HF_huge_bt2_create) /* * Check arguments. */ HDassert(hdr); /* Compute the size of 'raw' records on disk */ if(hdr->huge_ids_direct) rrec_size = hdr->sizeof_addr + hdr->sizeof_size; else rrec_size = hdr->sizeof_addr + hdr->sizeof_size + hdr->huge_id_size; /* Create v2 B-tree for tracking 'huge' objects */ if(H5B2_create(hdr->f, dxpl_id, &hdr->huge_bt2_class, H5HF_HUGE_BT2_NODE_SIZE, rrec_size, H5HF_HUGE_BT2_SPLIT_PERC, H5HF_HUGE_BT2_MERGE_PERC, &hdr->huge_bt2_addr/*out*/) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTCREATE, FAIL, "can't create v2 B-tree for tracking 'huge' heap objects") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_bt2_create() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_init * * Purpose: Initialize information for tracking 'huge' objects * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 7 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_init(H5HF_hdr_t *hdr) { FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5HF_huge_init) /* * Check arguments. */ HDassert(hdr); /* Compute information about 'huge' objects for the heap */ /* Check if we can completely hold the 'huge' object's offset & length in * the file in the heap ID (which will speed up accessing it) */ if((hdr->sizeof_addr + hdr->sizeof_size) <= (hdr->id_len - 1)) { /* Indicate that v2 B-tree doesn't have to be used to locate object */ hdr->huge_ids_direct = TRUE; /* Set the size of 'huge' object IDs */ hdr->huge_id_size = hdr->sizeof_addr + hdr->sizeof_size; } /* end if */ else { /* Indicate that v2 B-tree must be used to locate object */ hdr->huge_ids_direct = FALSE; /* Set the size and maximum value of 'huge' object ID */ if((hdr->id_len - 1) < sizeof(hsize_t)) { hdr->huge_id_size = hdr->id_len - 1; hdr->huge_max_id = ((hsize_t)1 << (hdr->huge_id_size * 8)) - 1; } /*end if */ else { hdr->huge_id_size = sizeof(hsize_t); hdr->huge_max_id = HSIZET_MAX; } /* end else */ } /* end else */ /* Set up the v2 B-tree for tracking 'huge' objects in the heap */ /* Copy the standard v2 B-tree class */ HDmemcpy(&hdr->huge_bt2_class, H5HF_BTREE2, sizeof(H5B2_class_t)); /* Set the native record size for the v2 B-tree */ hdr->huge_bt2_class.nrec_size = sizeof(H5HF_huge_bt2_rec_t); /* Set v2 B-tree class's "class private" pointer to the heap header */ hdr->huge_bt2_class.cls_private = hdr; FUNC_LEAVE_NOAPI(SUCCEED) } /* end H5HF_huge_init() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_insert * * Purpose: Insert a huge object into the file and track it * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 7 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_insert(H5HF_hdr_t *hdr, hid_t dxpl_id, size_t obj_size, const void *obj, void *_id) { H5HF_huge_bt2_rec_t obj_rec; /* Record for tracking object */ uint8_t *id = (uint8_t *)_id; /* Pointer to ID buffer */ haddr_t obj_addr; /* Address of object in the file */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5HF_huge_insert) #ifdef QAK HDfprintf(stderr, "%s: obj_size = %Zu\n", FUNC, obj_size); #endif /* QAK */ /* * Check arguments. */ HDassert(hdr); HDassert(obj_size > hdr->max_man_size); HDassert(obj); HDassert(id); /* Check if the v2 B-tree for tracking 'huge' heap objects has been created yet */ if(!H5F_addr_defined(hdr->huge_bt2_addr)) if(H5HF_huge_bt2_create(hdr, dxpl_id) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTCREATE, FAIL, "can't create v2 B-tree for tracking 'huge' heap objects") /* Allocate space in the file for storing the 'huge' object */ if(HADDR_UNDEF == (obj_addr = H5MF_alloc(hdr->f, H5FD_MEM_FHEAP_HUGE_OBJ, dxpl_id, (hsize_t)obj_size))) HGOTO_ERROR(H5E_HEAP, H5E_NOSPACE, FAIL, "file allocation failed for fractal heap huge object") /* Write the object's data to disk */ if(H5F_block_write(hdr->f, H5FD_MEM_FHEAP_HUGE_OBJ, obj_addr, obj_size, dxpl_id, obj) < 0) HGOTO_ERROR(H5E_HEAP, H5E_WRITEERROR, FAIL, "writing 'huge' object to file failed") /* Initialize shared part of record for tracking object in v2 B-tree */ obj_rec.addr = obj_addr; obj_rec.len = obj_size; /* If the 'huge' object will be indirectly accessed, through the v2 B-tree, * create an ID for it, otherwise put a zero in for ID */ if(hdr->huge_ids_direct) obj_rec.id = 0; else { /* Check for wrapping around 'huge' object ID space */ if(hdr->huge_ids_wrapped) /* Fail for now - eventually should iterate through v2 B-tree, looking for available ID */ HGOTO_ERROR(H5E_HEAP, H5E_UNSUPPORTED, FAIL, "wrapping 'huge' object IDs not supported yet") else { /* Get new 'huge' object ID to use for object */ /* (avoid using ID 0) */ obj_rec.id = ++hdr->huge_next_id; /* Check for wrapping 'huge' object IDs around */ if(hdr->huge_next_id == hdr->huge_max_id) hdr->huge_ids_wrapped = TRUE; } /* end else */ } /* end else */ #ifdef QAK HDfprintf(stderr, "%s: obj_rec = {%a, %Hu, %Hu}\n", FUNC, obj_rec.addr, obj_rec.len, obj_rec.id); #endif /* QAK */ /* Insert record for object in v2 B-tree */ if(H5B2_insert(hdr->f, dxpl_id, &hdr->huge_bt2_class, hdr->huge_bt2_addr, &obj_rec) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTINSERT, FAIL, "couldn't insert object tracking record in v2 B-tree") /* Encode ID for user */ *id++ = H5HF_ID_VERS_CURR | H5HF_ID_TYPE_HUGE; if(hdr->huge_ids_direct) { H5F_addr_encode(hdr->f, &id, obj_addr); H5F_ENCODE_LENGTH(hdr->f, id, (hsize_t)obj_size); } /* end if */ else UINT64ENCODE_VAR(id, obj_rec.id, hdr->huge_id_size) /* Update statistics about heap */ hdr->huge_size += obj_size; hdr->huge_nobjs++; /* Mark heap header as modified */ if(H5HF_hdr_dirty(hdr) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTDIRTY, FAIL, "can't mark heap header as dirty") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_insert() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_get_obj_len * * Purpose: Get the size of a 'huge' object in a fractal heap * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 8 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_get_obj_len(H5HF_hdr_t *hdr, hid_t dxpl_id, const uint8_t *id, size_t *obj_len_p) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5HF_huge_get_obj_len, FAIL) /* * Check arguments. */ HDassert(hdr); HDassert(H5F_addr_defined(hdr->huge_bt2_addr)); HDassert(id); HDassert(obj_len_p); /* Check if 'huge' object ID encodes address & length directly */ if(hdr->huge_ids_direct) { /* Skip over object offset in file */ id += hdr->sizeof_addr; /* Retrieve the object's length */ H5F_DECODE_LENGTH(hdr->f, id, *obj_len_p); } /* end if */ else { H5HF_huge_bt2_rec_t found_rec; /* Record found from tracking object */ H5HF_huge_bt2_rec_t search_rec; /* Record for searching for object */ /* Get ID for looking up 'huge' object in v2 B-tree */ UINT64DECODE_VAR(id, search_rec.id, hdr->huge_id_size) /* Look up object in v2 B-tree */ if(H5B2_find(hdr->f, dxpl_id, &hdr->huge_bt2_class, hdr->huge_bt2_addr, &search_rec, H5HF_huge_bt2_found, &found_rec) < 0) HGOTO_ERROR(H5E_HEAP, H5E_NOTFOUND, FAIL, "can't find object in B-tree") /* Retrieve the object's length */ *obj_len_p = (size_t)found_rec.len; } /* end else */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_get_obj_len() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_read * * Purpose: Read a 'huge' object from the heap * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 8 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_read(H5HF_hdr_t *hdr, hid_t dxpl_id, const uint8_t *id, void *obj) { haddr_t obj_addr; /* Object's address in the file */ hsize_t obj_size; /* Object's size in the file */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5HF_huge_read) /* * Check arguments. */ HDassert(hdr); HDassert(id); HDassert(obj); /* Check for 'huge' object ID that encodes address & length directly */ if(hdr->huge_ids_direct) { /* Retrieve the object's address and length */ H5F_addr_decode(hdr->f, &id, &obj_addr); H5F_DECODE_LENGTH(hdr->f, id, obj_size); } /* end if */ else { H5HF_huge_bt2_rec_t found_rec; /* Record found from tracking object */ H5HF_huge_bt2_rec_t search_rec; /* Record for searching for object */ /* Get ID for looking up 'huge' object in v2 B-tree */ UINT64DECODE_VAR(id, search_rec.id, hdr->huge_id_size) /* Look up object in v2 B-tree */ if(H5B2_find(hdr->f, dxpl_id, &hdr->huge_bt2_class, hdr->huge_bt2_addr, &search_rec, H5HF_huge_bt2_found, &found_rec) < 0) HGOTO_ERROR(H5E_HEAP, H5E_NOTFOUND, FAIL, "can't find object in B-tree") /* Retrieve the object's address & length */ obj_addr = found_rec.addr; obj_size = found_rec.len; } /* end else */ /* Read the object's data from the file */ if (H5F_block_read(hdr->f, H5FD_MEM_FHEAP_HUGE_OBJ, obj_addr, (size_t)obj_size, dxpl_id, obj) < 0) HGOTO_ERROR(H5E_HEAP, H5E_READERROR, FAIL, "can't read 'huge' object's data from the file") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_read() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_remove * * Purpose: Remove a 'huge' object from the file and the v2 B-tree tracker * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 8 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_remove(H5HF_hdr_t *hdr, hid_t dxpl_id, const uint8_t *id) { H5HF_huge_bt2_rec_t search_rec; /* Record for searching for object */ H5HF_huge_remove_ud1_t udata; /* User callback data for v2 B-tree remove call */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5HF_huge_remove) /* * Check arguments. */ HDassert(hdr); HDassert(id); /* Check for 'huge' object ID that encodes address & length directly */ if(hdr->huge_ids_direct) { /* Retrieve the object's address and length */ /* (used as key in v2 B-tree record) */ H5F_addr_decode(hdr->f, &id, &search_rec.addr); H5F_DECODE_LENGTH(hdr->f, id, search_rec.len); } /* end if */ else /* Get ID for looking up 'huge' object in v2 B-tree */ UINT64DECODE_VAR(id, search_rec.id, hdr->huge_id_size) /* Set up the callback info */ udata.hdr = hdr; udata.dxpl_id = dxpl_id; /* Remove the record for tracking the 'huge' object from the v2 B-tree */ /* (space in the file for the object is freed in the 'remove' callback) */ if(H5B2_remove(hdr->f, dxpl_id, &hdr->huge_bt2_class, hdr->huge_bt2_addr, &search_rec, H5HF_huge_bt2_remove, &udata) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTREMOVE, FAIL, "can't remove object from B-tree") /* Update statistics about heap */ hdr->huge_size -= udata.obj_len; hdr->huge_nobjs--; /* Mark heap header as modified */ if(H5HF_hdr_dirty(hdr) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTDIRTY, FAIL, "can't mark heap header as dirty") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_remove() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_term * * Purpose: Shut down the information for tracking 'huge' objects * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 8 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_term(H5HF_hdr_t *hdr, hid_t dxpl_id) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5HF_huge_term) /* * Check arguments. */ HDassert(hdr); /* Check if there are no more 'huge' objects in the heap and delete the * v2 B-tree that tracks them, if so */ if(H5F_addr_defined(hdr->huge_bt2_addr) && hdr->huge_nobjs == 0) { /* Sanity check */ HDassert(hdr->huge_size == 0); /* Delete the v2 B-tree */ if(H5B2_delete(hdr->f, dxpl_id, &hdr->huge_bt2_class, hdr->huge_bt2_addr, NULL, NULL) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTDELETE, FAIL, "can't delete v2 B-tree") /* Reset the information about 'huge' objects in the file */ hdr->huge_bt2_addr = HADDR_UNDEF; hdr->huge_next_id = 0; hdr->huge_ids_wrapped = FALSE; /* Mark heap header as modified */ if(H5HF_hdr_dirty(hdr) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTDIRTY, FAIL, "can't mark heap header as dirty") } /* end if */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_term() */ /*------------------------------------------------------------------------- * Function: H5HF_huge_delete * * Purpose: Delete all the 'huge' objects in the heap, and the v2 B-tree * tracker for them * * Return: SUCCEED/FAIL * * Programmer: Quincey Koziol * koziol@hdfgroup.org * Aug 8 2006 * *------------------------------------------------------------------------- */ herr_t H5HF_huge_delete(H5HF_hdr_t *hdr, hid_t dxpl_id) { H5HF_huge_remove_ud1_t udata; /* User callback data for v2 B-tree remove call */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5HF_huge_delete) /* * Check arguments. */ HDassert(hdr); HDassert(H5F_addr_defined(hdr->huge_bt2_addr)); HDassert(hdr->huge_nobjs); HDassert(hdr->huge_size); /* Set up the callback info */ udata.hdr = hdr; udata.dxpl_id = dxpl_id; /* Delete the v2 B-tree */ if(H5B2_delete(hdr->f, dxpl_id, &hdr->huge_bt2_class, hdr->huge_bt2_addr, H5HF_huge_bt2_remove, &udata) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTDELETE, FAIL, "can't delete v2 B-tree") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5HF_huge_delete() */