/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * Purpose: Dataset callbacks for the native VOL connector * */ /****************/ /* Module Setup */ /****************/ #define H5D_FRIEND /* Suppress error about including H5Dpkg */ /***********/ /* Headers */ /***********/ #include "H5private.h" /* Generic Functions */ #include "H5CXprivate.h" /* API Contexts */ #include "H5Dpkg.h" /* Datasets */ #include "H5Eprivate.h" /* Error handling */ #include "H5Fprivate.h" /* Files */ #include "H5Gprivate.h" /* Groups */ #include "H5Iprivate.h" /* IDs */ #include "H5Pprivate.h" /* Property lists */ #include "H5Sprivate.h" /* Dataspaces */ #include "H5VLprivate.h" /* Virtual Object Layer */ #include "H5VLnative_private.h" /* Native VOL connector */ /****************/ /* Local Macros */ /****************/ /******************/ /* Local Typedefs */ /******************/ /********************/ /* Local Prototypes */ /********************/ /* Helper routines for read/write API calls */ static herr_t H5VL__native_dataset_io_setup(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[], hid_t dxpl_id, H5_flexible_const_ptr_t buf[], H5D_dset_io_info_t *dinfo); static herr_t H5VL__native_dataset_io_cleanup(size_t count, hid_t mem_space_id[], hid_t file_space_id[], H5D_dset_io_info_t *dinfo); /*********************/ /* Package Variables */ /*********************/ /*****************************/ /* Library Private Variables */ /*****************************/ /*******************/ /* Local Variables */ /*******************/ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_io_setup * * Purpose: Set up file and memory dataspaces for dataset I/O operation * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ static herr_t H5VL__native_dataset_io_setup(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[], hid_t dxpl_id, H5_flexible_const_ptr_t buf[], H5D_dset_io_info_t *dinfo) { H5F_shared_t *f_sh; size_t i; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE /* Sanity checks */ HDassert(dinfo); /* Get shared file */ f_sh = H5F_SHARED(((H5D_t *)obj[0])->oloc.file); /* Iterate over datasets */ for (i = 0; i < count; i++) { /* Set up dset */ dinfo[i].dset = (H5D_t *)obj[i]; HDassert(dinfo[i].dset); /* Check dataset's file pointer is valid */ if (NULL == dinfo[i].dset->oloc.file) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dataset is not associated with a file") if (f_sh != H5F_SHARED(dinfo[i].dset->oloc.file)) HGOTO_ERROR(H5E_ARGS, H5E_UNSUPPORTED, FAIL, "different files detected in multi dataset I/O request") /* Set up memory type */ dinfo[i].mem_type_id = mem_type_id[i]; /* Set up file dataspace */ if (H5S_ALL == file_space_id[i]) /* Use dataspace for dataset */ dinfo[i].file_space = dinfo[i].dset->shared->space; else if (H5S_BLOCK == file_space_id[i]) HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "H5S_BLOCK is not allowed for file dataspace") else if (H5S_PLIST == file_space_id[i]) { H5P_genplist_t *plist; /* Property list pointer */ H5S_t *space; /* Dataspace to hold selection */ /* Get the plist structure */ if (NULL == (plist = H5P_object_verify(dxpl_id, H5P_DATASET_XFER))) HGOTO_ERROR(H5E_DATASET, H5E_BADID, FAIL, "bad dataset transfer property list") /* Get a pointer to the file space in the property list */ if (H5P_peek(plist, H5D_XFER_DSET_IO_SEL_NAME, &space) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "error getting dataset I/O selection") /* Use dataspace for dataset */ dinfo[i].file_space = dinfo[i].dset->shared->space; /* Copy, but share, selection from property list to dataset's dataspace */ if (H5S_SELECT_COPY(dinfo[i].file_space, space, TRUE) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "can't copy dataset I/O selection") } /* end else-if */ else { /* Get the dataspace pointer */ if (NULL == (dinfo[i].file_space = (H5S_t *)H5I_object_verify(file_space_id[i], H5I_DATASPACE))) HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "file_space_id is not a dataspace ID") } /* end else */ /* Get dataspace for memory buffer */ if (H5S_ALL == mem_space_id[i]) dinfo[i].mem_space = dinfo[i].file_space; else if (H5S_BLOCK == mem_space_id[i]) { hsize_t nelmts; /* # of selected elements in file */ /* Get the # of elements selected */ nelmts = H5S_GET_SELECT_NPOINTS(dinfo[i].file_space); /* Check for any elements */ if (nelmts > 0) { /* Create a 1-D dataspace of the same # of elements */ if (NULL == (dinfo[i].mem_space = H5S_create_simple(1, &nelmts, NULL))) HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, FAIL, "unable to create simple memory dataspace") } /* end if */ else { /* Create a NULL dataspace of the same # of elements */ if (NULL == (dinfo[i].mem_space = H5S_create(H5S_NULL))) HGOTO_ERROR(H5E_DATASET, H5E_CANTCREATE, FAIL, "unable to create NULL memory dataspace") } /* end else */ } /* end if */ else if (H5S_PLIST == mem_space_id[i]) HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "H5S_PLIST is not allowed for memory dataspace") else { /* Get the dataspace pointer */ if (NULL == (dinfo[i].mem_space = (H5S_t *)H5I_object_verify(mem_space_id[i], H5I_DATASPACE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "mem_space_id is not a dataspace ID") } /* end else */ /* Check for valid selections */ if (H5S_SELECT_VALID(dinfo[i].file_space) != TRUE) HGOTO_ERROR(H5E_DATASPACE, H5E_BADRANGE, FAIL, "selection + offset not within extent for file dataspace") if (H5S_SELECT_VALID(dinfo[i].mem_space) != TRUE) HGOTO_ERROR(H5E_DATASPACE, H5E_BADRANGE, FAIL, "selection + offset not within extent for memory dataspace") /* Set up buf */ dinfo[i].buf = buf[i]; } done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_io_setup() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_io_cleanup * * Purpose: Frees memory allocated by H5VL__native_dataset_io_setup() * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ static herr_t H5VL__native_dataset_io_cleanup(size_t count, hid_t mem_space_id[], hid_t file_space_id[], H5D_dset_io_info_t *dinfo) { size_t i; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE /* Sanity checks */ HDassert(dinfo); /* Iterate over datasets */ for (i = 0; i < count; i++) { /* Free memory dataspace if it was created. Use HDONE_ERROR in this function so we always * try to free everything we can. */ if (H5S_BLOCK == mem_space_id[i] && dinfo[i].mem_space) if (H5S_close(dinfo[i].mem_space) < 0) HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL, "unable to release temporary memory dataspace for H5S_BLOCK") /* Reset file dataspace selection if it was copied from the property list */ if (H5S_PLIST == file_space_id[i] && dinfo[i].file_space) if (H5S_select_all(dinfo[i].file_space, TRUE) < 0) HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL, "unable to release file dataspace selection for H5S_PLIST") } FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_io_cleanup() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_create * * Purpose: Handles the dataset create callback * * Return: Success: dataset pointer * Failure: NULL * *------------------------------------------------------------------------- */ void * H5VL__native_dataset_create(void *obj, const H5VL_loc_params_t *loc_params, const char *name, hid_t lcpl_id, hid_t type_id, hid_t space_id, hid_t dcpl_id, hid_t dapl_id, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req) { H5G_loc_t loc; /* Object location to insert dataset into */ H5D_t *dset = NULL; /* New dataset's info */ const H5S_t *space; /* Dataspace for dataset */ void *ret_value; FUNC_ENTER_PACKAGE /* Check arguments */ if (H5G_loc_real(obj, loc_params->obj_type, &loc) < 0) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a file or file object") if (H5I_DATATYPE != H5I_get_type(type_id)) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a datatype ID") if (NULL == (space = (const H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a dataspace ID") /* H5Dcreate_anon */ if (NULL == name) { /* build and open the new dataset */ if (NULL == (dset = H5D__create(loc.oloc->file, type_id, space, dcpl_id, dapl_id))) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, NULL, "unable to create dataset") } /* end if */ /* H5Dcreate2 */ else { /* Create the new dataset & get its ID */ if (NULL == (dset = H5D__create_named(&loc, name, type_id, space, lcpl_id, dcpl_id, dapl_id))) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, NULL, "unable to create dataset") } /* end else */ ret_value = (void *)dset; done: if (NULL == name) { /* Release the dataset's object header, if it was created */ if (dset) { H5O_loc_t *oloc; /* Object location for dataset */ /* Get the new dataset's object location */ if (NULL == (oloc = H5D_oloc(dset))) HDONE_ERROR(H5E_DATASET, H5E_CANTGET, NULL, "unable to get object location of dataset") /* Decrement refcount on dataset's object header in memory */ if (H5O_dec_rc_by_loc(oloc) < 0) HDONE_ERROR(H5E_DATASET, H5E_CANTDEC, NULL, "unable to decrement refcount on newly created object") } /* end if */ } /* end if */ FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_create() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_open * * Purpose: Handles the dataset open callback * * Return: Success: dataset pointer * Failure: NULL * *------------------------------------------------------------------------- */ void * H5VL__native_dataset_open(void *obj, const H5VL_loc_params_t *loc_params, const char *name, hid_t dapl_id, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req) { H5D_t *dset = NULL; H5G_loc_t loc; /* Object location of group */ void *ret_value = NULL; FUNC_ENTER_PACKAGE if (H5G_loc_real(obj, loc_params->obj_type, &loc) < 0) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, NULL, "not a file or file object") /* Open the dataset */ if (NULL == (dset = H5D__open_name(&loc, name, dapl_id))) HGOTO_ERROR(H5E_DATASET, H5E_CANTOPENOBJ, NULL, "unable to open dataset") ret_value = (void *)dset; done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_open() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_read * * Purpose: Handles the dataset read callback * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ herr_t H5VL__native_dataset_read(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[], hid_t dxpl_id, void *buf[], void H5_ATTR_UNUSED **req) { H5D_dset_io_info_t dinfo_local; H5D_dset_io_info_t *dinfo = &dinfo_local; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE /* Allocate dataset info array if necessary */ if (count > 1) if (NULL == (dinfo = (H5D_dset_io_info_t *)H5MM_malloc(count * sizeof(H5D_dset_io_info_t)))) HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate dset info array buffer") /* Get file & memory dataspaces */ if (H5VL__native_dataset_io_setup(count, obj, mem_type_id, mem_space_id, file_space_id, dxpl_id, (H5_flexible_const_ptr_t *)buf, dinfo) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to set up file and memory dataspaces") /* Set DXPL for operation */ H5CX_set_dxpl(dxpl_id); /* Read raw data. Call H5D__read directly in single dset case. */ if (H5D__read(count, dinfo) < 0) HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read data") done: /* Clean up */ if (H5VL__native_dataset_io_cleanup(count, mem_space_id, file_space_id, dinfo) < 0) HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL, "unable to release dataset info") if (dinfo != &dinfo_local) H5MM_xfree(dinfo); FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_read() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_write * * Purpose: Handles the dataset write callback * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ herr_t H5VL__native_dataset_write(size_t count, void *obj[], hid_t mem_type_id[], hid_t mem_space_id[], hid_t file_space_id[], hid_t dxpl_id, const void *buf[], void H5_ATTR_UNUSED **req) { H5D_dset_io_info_t dinfo_local; H5D_dset_io_info_t *dinfo = &dinfo_local; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE /* Allocate dataset info array if necessary */ if (count > 1) if (NULL == (dinfo = (H5D_dset_io_info_t *)H5MM_malloc(count * sizeof(H5D_dset_io_info_t)))) HGOTO_ERROR(H5E_DATASET, H5E_CANTALLOC, FAIL, "couldn't allocate dset info array buffer") /* Get file & memory dataspaces */ if (H5VL__native_dataset_io_setup(count, obj, mem_type_id, mem_space_id, file_space_id, dxpl_id, (H5_flexible_const_ptr_t *)buf, dinfo) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to set up file and memory dataspaces") /* Set DXPL for operation */ H5CX_set_dxpl(dxpl_id); /* Write raw data. Call H5D__write directly in single dset case. */ if (H5D__write(count, dinfo) < 0) HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write data") done: /* Clean up */ if (H5VL__native_dataset_io_cleanup(count, mem_space_id, file_space_id, dinfo) < 0) HDONE_ERROR(H5E_DATASET, H5E_CANTRELEASE, FAIL, "unable to release dataset info") if (dinfo != &dinfo_local) H5MM_xfree(dinfo); FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_write() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_get * * Purpose: Handles the dataset get callback * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ herr_t H5VL__native_dataset_get(void *obj, H5VL_dataset_get_args_t *args, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req) { H5D_t *dset = (H5D_t *)obj; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE switch (args->op_type) { /* H5Dget_space */ case H5VL_DATASET_GET_SPACE: { if ((args->args.get_space.space_id = H5D__get_space(dset)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get space ID of dataset") break; } /* H5Dget_space_status */ case H5VL_DATASET_GET_SPACE_STATUS: { if (H5D__get_space_status(dset, args->args.get_space_status.status) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to get space status") break; } /* H5Dget_type */ case H5VL_DATASET_GET_TYPE: { if ((args->args.get_type.type_id = H5D__get_type(dset)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get datatype ID of dataset") break; } /* H5Dget_create_plist */ case H5VL_DATASET_GET_DCPL: { if ((args->args.get_dcpl.dcpl_id = H5D_get_create_plist(dset)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get creation property list for dataset") break; } /* H5Dget_access_plist */ case H5VL_DATASET_GET_DAPL: { if ((args->args.get_dapl.dapl_id = H5D_get_access_plist(dset)) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get access property list for dataset") break; } /* H5Dget_storage_size */ case H5VL_DATASET_GET_STORAGE_SIZE: { if (H5D__get_storage_size(dset, args->args.get_storage_size.storage_size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get size of dataset's storage") break; } default: HGOTO_ERROR(H5E_VOL, H5E_CANTGET, FAIL, "can't get this type of information from dataset") } /* end switch */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_get() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_specific * * Purpose: Handles the dataset specific callback * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ herr_t H5VL__native_dataset_specific(void *obj, H5VL_dataset_specific_args_t *args, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req) { H5D_t *dset = (H5D_t *)obj; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE switch (args->op_type) { /* H5Dset_extent (H5Dextend - deprecated) */ case H5VL_DATASET_SET_EXTENT: { if (H5D__set_extent(dset, args->args.set_extent.size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTSET, FAIL, "unable to set extent of dataset") break; } /* H5Dflush */ case H5VL_DATASET_FLUSH: { if (H5D__flush(dset, args->args.flush.dset_id) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTFLUSH, FAIL, "unable to flush dataset") break; } /* H5Drefresh */ case H5VL_DATASET_REFRESH: { if (H5D__refresh(dset, args->args.refresh.dset_id) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL, "unable to refresh dataset") break; } default: HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "invalid specific operation") } /* end switch */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_specific() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_optional * * Purpose: Handles the dataset optional callback * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ herr_t H5VL__native_dataset_optional(void *obj, H5VL_optional_args_t *args, hid_t dxpl_id, void H5_ATTR_UNUSED **req) { H5D_t *dset = (H5D_t *)obj; /* Dataset */ H5VL_native_dataset_optional_args_t *opt_args = args->args; /* Pointer to native operation's arguments */ herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE /* Sanity checks */ HDassert(dset); /* Set DXPL for operation */ H5CX_set_dxpl(dxpl_id); switch (args->op_type) { /* H5Dformat_convert */ case H5VL_NATIVE_DATASET_FORMAT_CONVERT: { switch (dset->shared->layout.type) { case H5D_CHUNKED: /* Convert the chunk indexing type to version 1 B-tree if not */ if (dset->shared->layout.u.chunk.idx_type != H5D_CHUNK_IDX_BTREE) if (H5D__format_convert(dset) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL, "unable to downgrade chunk indexing type for dataset") break; case H5D_CONTIGUOUS: case H5D_COMPACT: /* Downgrade the layout version to 3 if greater than 3 */ if (dset->shared->layout.version > H5O_LAYOUT_VERSION_DEFAULT) if (H5D__format_convert(dset) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTLOAD, FAIL, "unable to downgrade layout version for dataset") break; case H5D_VIRTUAL: /* Nothing to do even though layout is version 4 */ break; case H5D_LAYOUT_ERROR: case H5D_NLAYOUTS: HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset layout type") default: HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "unknown dataset layout type") } /* end switch */ break; } /* H5Dget_chunk_index_type */ case H5VL_NATIVE_DATASET_GET_CHUNK_INDEX_TYPE: { /* Make sure the dataset is chunked */ if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Get the chunk indexing type */ *opt_args->get_chunk_idx_type.idx_type = dset->shared->layout.u.chunk.idx_type; break; } /* H5Dget_chunk_storage_size */ case H5VL_NATIVE_DATASET_GET_CHUNK_STORAGE_SIZE: { H5VL_native_dataset_get_chunk_storage_size_t *gcss_args = &opt_args->get_chunk_storage_size; /* Make sure the dataset is chunked */ if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Call private function */ if (H5D__get_chunk_storage_size(dset, gcss_args->offset, gcss_args->size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get storage size of chunk") break; } /* H5Dget_num_chunks */ case H5VL_NATIVE_DATASET_GET_NUM_CHUNKS: { H5VL_native_dataset_get_num_chunks_t *gnc_args = &opt_args->get_num_chunks; const H5S_t *space = NULL; HDassert(dset->shared); HDassert(dset->shared->space); /* When default dataspace is given, use the dataset's dataspace */ if (gnc_args->space_id == H5S_ALL) space = dset->shared->space; else /* otherwise, use the given space ID */ if (NULL == (space = (const H5S_t *)H5I_object_verify(gnc_args->space_id, H5I_DATASPACE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a valid dataspace ID") /* Make sure the dataset is chunked */ if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Call private function */ if (H5D__get_num_chunks(dset, space, gnc_args->nchunks) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get number of chunks") break; } /* H5Dget_chunk_info */ case H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_IDX: { H5VL_native_dataset_get_chunk_info_by_idx_t *gcibi_args = &opt_args->get_chunk_info_by_idx; const H5S_t *space; HDassert(dset->shared); HDassert(dset->shared->space); /* When default dataspace is given, use the dataset's dataspace */ if (gcibi_args->space_id == H5S_ALL) space = dset->shared->space; else /* otherwise, use the given space ID */ if (NULL == (space = (const H5S_t *)H5I_object_verify(gcibi_args->space_id, H5I_DATASPACE))) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a valid dataspace ID") /* Make sure the dataset is chunked */ if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Call private function */ if (H5D__get_chunk_info(dset, space, gcibi_args->chk_index, gcibi_args->offset, gcibi_args->filter_mask, gcibi_args->addr, gcibi_args->size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk info by index") break; } /* H5Dget_chunk_info_by_coord */ case H5VL_NATIVE_DATASET_GET_CHUNK_INFO_BY_COORD: { H5VL_native_dataset_get_chunk_info_by_coord_t *gcibc_args = &opt_args->get_chunk_info_by_coord; HDassert(dset->shared); /* Make sure the dataset is chunked */ if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Call private function */ if (H5D__get_chunk_info_by_coord(dset, gcibc_args->offset, gcibc_args->filter_mask, gcibc_args->addr, gcibc_args->size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get chunk info by its logical coordinates") break; } /* H5Dread_chunk */ case H5VL_NATIVE_DATASET_CHUNK_READ: { H5VL_native_dataset_chunk_read_t *chunk_read_args = &opt_args->chunk_read; hsize_t offset_copy[H5O_LAYOUT_NDIMS]; /* Internal copy of chunk offset */ /* Check arguments */ if (NULL == dset->oloc.file) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dataset is not associated with a file") if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Copy the user's offset array so we can be sure it's terminated properly. * (we don't want to mess with the user's buffer). */ if (H5D__chunk_get_offset_copy(dset, chunk_read_args->offset, offset_copy) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "failure to copy offset array") /* Read the raw chunk */ if (H5D__chunk_direct_read(dset, offset_copy, &chunk_read_args->filters, chunk_read_args->buf) < 0) HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "can't read unprocessed chunk data") break; } /* H5Dwrite_chunk */ case H5VL_NATIVE_DATASET_CHUNK_WRITE: { H5VL_native_dataset_chunk_write_t *chunk_write_args = &opt_args->chunk_write; hsize_t offset_copy[H5O_LAYOUT_NDIMS]; /* Internal copy of chunk offset */ /* Check arguments */ if (NULL == dset->oloc.file) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "dataset is not associated with a file") if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Copy the user's offset array so we can be sure it's terminated properly. * (we don't want to mess with the user's buffer). */ if (H5D__chunk_get_offset_copy(dset, chunk_write_args->offset, offset_copy) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "failure to copy offset array") /* Write chunk */ if (H5D__chunk_direct_write(dset, chunk_write_args->filters, offset_copy, chunk_write_args->size, chunk_write_args->buf) < 0) HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "can't write unprocessed chunk data") break; } /* H5Dvlen_get_buf_size */ case H5VL_NATIVE_DATASET_GET_VLEN_BUF_SIZE: { H5VL_native_dataset_get_vlen_buf_size_t *gvbs_args = &opt_args->get_vlen_buf_size; if (H5D__vlen_get_buf_size(dset, gvbs_args->type_id, gvbs_args->space_id, gvbs_args->size) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get size of vlen buf needed") break; } /* H5Dget_offset */ case H5VL_NATIVE_DATASET_GET_OFFSET: { /* Get offset */ *opt_args->get_offset.offset = H5D__get_offset(dset); break; } /* H5Dchunk_iter */ case H5VL_NATIVE_DATASET_CHUNK_ITER: { /* Sanity check */ HDassert(dset->shared); /* Make sure the dataset is chunked */ if (H5D_CHUNKED != dset->shared->layout.type) HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a chunked dataset") /* Call private function */ if ((ret_value = H5D__chunk_iter(dset, opt_args->chunk_iter.op, opt_args->chunk_iter.op_data)) < 0) HERROR(H5E_DATASET, H5E_BADITER, "chunk iteration failed"); break; } default: HGOTO_ERROR(H5E_VOL, H5E_UNSUPPORTED, FAIL, "invalid optional operation") } /* end switch */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_optional() */ /*------------------------------------------------------------------------- * Function: H5VL__native_dataset_close * * Purpose: Handles the dataset close callback * * Return: Success: SUCCEED * Failure: FAIL (dataset will not be closed) * *------------------------------------------------------------------------- */ herr_t H5VL__native_dataset_close(void *dset, hid_t H5_ATTR_UNUSED dxpl_id, void H5_ATTR_UNUSED **req) { herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_PACKAGE if (H5D_close((H5D_t *)dset) < 0) HGOTO_ERROR(H5E_DATASET, H5E_CANTDEC, FAIL, "can't close dataset") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5VL__native_dataset_close() */