/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #define H5Z_PACKAGE /*suppress error about including H5Zpkg */ /* Interface initialization */ #define H5_INTERFACE_INIT_FUNC H5Z_init_interface #include "H5private.h" /* Generic Functions */ #include "H5Dprivate.h" /* Dataset functions */ #include "H5Eprivate.h" /* Error handling */ #include "H5Iprivate.h" /* IDs */ #include "H5MMprivate.h" /* Memory management */ #include "H5Oprivate.h" /* Object headers */ #include "H5Pprivate.h" /* Property lists */ #include "H5Sprivate.h" /* Dataspace functions */ #include "H5Zpkg.h" /* Data filters */ #ifdef H5_HAVE_SZLIB_H # include "szlib.h" #endif /* Local typedefs */ #ifdef H5Z_DEBUG typedef struct H5Z_stats_t { struct { hsize_t total; /*total number of bytes processed */ hsize_t errors; /*bytes of total attributable to errors */ H5_timer_t timer; /*execution time including errors */ } stats[2]; /*0=output, 1=input */ } H5Z_stats_t; #endif /* H5Z_DEBUG */ /* Enumerated type for dataset creation prelude callbacks */ typedef enum { H5Z_PRELUDE_CAN_APPLY, /* Call "can apply" callback */ H5Z_PRELUDE_SET_LOCAL /* Call "set local" callback */ } H5Z_prelude_type_t; /* Local variables */ static size_t H5Z_table_alloc_g = 0; static size_t H5Z_table_used_g = 0; static H5Z_class_t *H5Z_table_g = NULL; #ifdef H5Z_DEBUG static H5Z_stats_t *H5Z_stat_table_g = NULL; #endif /* H5Z_DEBUG */ /* Local functions */ static int H5Z_find_idx(H5Z_filter_t id); /*------------------------------------------------------------------------- * Function: H5Z_init_interface * * Purpose: Initializes the data filter layer. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Thursday, April 16, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t H5Z_init_interface (void) { herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5Z_init_interface) #ifdef H5_HAVE_FILTER_DEFLATE if (H5Z_register (H5Z_DEFLATE)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTINIT, FAIL, "unable to register deflate filter") #endif /* H5_HAVE_FILTER_DEFLATE */ #ifdef H5_HAVE_FILTER_SHUFFLE if (H5Z_register (H5Z_SHUFFLE)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTINIT, FAIL, "unable to register shuffle filter") #endif /* H5_HAVE_FILTER_SHUFFLE */ #ifdef H5_HAVE_FILTER_FLETCHER32 if (H5Z_register (H5Z_FLETCHER32)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTINIT, FAIL, "unable to register fletcher32 filter") #endif /* H5_HAVE_FILTER_FLETCHER32 */ #ifdef H5_HAVE_FILTER_SZIP if (H5Z_register (H5Z_SZIP)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTINIT, FAIL, "unable to register szip filter") #endif /* H5_HAVE_FILTER_SZIP */ #if (defined H5_HAVE_FILTER_DEFLATE | defined H5_HAVE_FILTER_FLETCHER32 | defined H5_HAVE_FILTER_SHUFFLE | defined H5_HAVE_FILTER_SZIP) done: #endif /* (defined H5_HAVE_FILTER_DEFLATE | defined H5_HAVE_FILTER_FLETCHER32 | defined H5_HAVE_FILTER_SHUFFLE | defined H5_HAVE_FILTER_SZIP) */ FUNC_LEAVE_NOAPI(ret_value) } /*------------------------------------------------------------------------- * Function: H5Z_term_interface * * Purpose: Terminate the H5Z layer. * * Return: void * * Programmer: Robb Matzke * Thursday, April 16, 1998 * * Modifications: * *------------------------------------------------------------------------- */ int H5Z_term_interface (void) { #ifdef H5Z_DEBUG size_t i; int dir, nprint=0; char comment[16], bandwidth[32]; #endif if (H5_interface_initialize_g) { #ifdef H5Z_DEBUG if (H5DEBUG(Z)) { for (i=0; i", comment, H5Z_stat_table_g[i].stats[dir].total, H5Z_stat_table_g[i].stats[dir].errors, H5Z_stat_table_g[i].stats[dir].timer.utime, H5Z_stat_table_g[i].stats[dir].timer.stime, H5Z_stat_table_g[i].stats[dir].timer.etime, bandwidth); } } } #endif /* H5Z_DEBUG */ /* Free the table of filters */ H5Z_table_g = H5MM_xfree(H5Z_table_g); #ifdef H5Z_DEBUG H5Z_stat_table_g = H5MM_xfree(H5Z_stat_table_g); #endif /* H5Z_DEBUG */ H5Z_table_used_g = H5Z_table_alloc_g = 0; H5_interface_initialize_g = 0; } return 0; } #ifdef H5_WANT_H5_V1_4_COMPAT /*------------------------------------------------------------------------- * Function: H5Zregister * * Purpose: This function registers new filter. The COMMENT argument is * used for debugging and may be the null pointer. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Thursday, April 16, 1998 * * Modifications: * Changed to pass H5Z_class_t struct to H5Z_register * Quincey Koziol, April 5, 2003 * *------------------------------------------------------------------------- */ herr_t H5Zregister(H5Z_filter_t id, const char *comment, H5Z_func_t func) { H5Z_class_t cls; /* Filter class used to bundle parameters */ herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_API(H5Zregister, FAIL); H5TRACE3("e","Zfsx",id,comment,func); /* Check args */ if (id<0 || id>H5Z_FILTER_MAX) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid filter identification number"); if (idid<0 || cls->id>H5Z_FILTER_MAX) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid filter identification number") if (cls->idfilter==NULL) HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no filter function specified") /* Do it */ if (H5Z_register (cls)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTINIT, FAIL, "unable to register filter") done: FUNC_LEAVE_API(ret_value) } #endif /* H5_WANT_H5_V1_4_COMPAT */ /*------------------------------------------------------------------------- * Function: H5Z_register * * Purpose: Same as the public version except this one allows filters * to be set for predefined method numbers id>=0 && cls->id<=H5Z_FILTER_MAX); /* Is the filter already registered? */ for (i=0; iid) break; /* Filter not already registered */ if (i>=H5Z_table_used_g) { if (H5Z_table_used_g>=H5Z_table_alloc_g) { size_t n = MAX(H5Z_MAX_NFILTERS, 2*H5Z_table_alloc_g); H5Z_class_t *table = H5MM_realloc(H5Z_table_g, n*sizeof(H5Z_class_t)); #ifdef H5Z_DEBUG H5Z_stats_t *stat_table = H5MM_realloc(H5Z_stat_table_g, n*sizeof(H5Z_stats_t)); #endif /* H5Z_DEBUG */ if (!table) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "unable to extend filter table") H5Z_table_g = table; #ifdef H5Z_DEBUG if (!stat_table) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "unable to extend filter statistics table") H5Z_stat_table_g = stat_table; #endif /* H5Z_DEBUG */ H5Z_table_alloc_g = n; } /* end if */ /* Initialize */ i = H5Z_table_used_g++; HDmemcpy(H5Z_table_g+i, cls, sizeof(H5Z_class_t)); #ifdef H5Z_DEBUG HDmemset(H5Z_stat_table_g+i, 0, sizeof(H5Z_stats_t)); #endif /* H5Z_DEBUG */ } /* end if */ /* Filter already registered */ else { /* Replace old contents */ HDmemcpy(H5Z_table_g+i, cls, sizeof(H5Z_class_t)); } /* end else */ done: FUNC_LEAVE_NOAPI(ret_value) } /*------------------------------------------------------------------------- * Function: H5Zunregister * * Purpose: This function unregisters a filter. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Thursday, November 14, 2002 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Zunregister(H5Z_filter_t id) { herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_API(H5Zunregister, FAIL) H5TRACE1("e","Zf",id); /* Check args */ if (id<0 || id>H5Z_FILTER_MAX) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid filter identification number") if (id=0 && id<=H5Z_FILTER_MAX); /* Is the filter already registered? */ for (i=0; i=H5Z_table_used_g) HGOTO_ERROR(H5E_PLINE, H5E_NOTFOUND, FAIL, "filter is not registered") /* Remove filter from table */ /* Don't worry about shrinking table size (for now) */ HDmemmove(&H5Z_table_g[i],&H5Z_table_g[i+1],sizeof(H5Z_class_t)*((H5Z_table_used_g-1)-i)); #ifdef H5Z_DEBUG HDmemmove(&H5Z_stat_table_g[i],&H5Z_stat_table_g[i+1],sizeof(H5Z_stats_t)*((H5Z_table_used_g-1)-i)); #endif /* H5Z_DEBUG */ H5Z_table_used_g--; done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_unregister() */ /*------------------------------------------------------------------------- * Function: H5Zfilter_avail * * Purpose: Check if a filter is available * * Return: Non-negative (TRUE/FALSE) on success/Negative on failure * * Programmer: Quincey Koziol * Thursday, November 14, 2002 * * Modifications: * *------------------------------------------------------------------------- */ htri_t H5Zfilter_avail(H5Z_filter_t id) { size_t i; /* Local index variable */ htri_t ret_value=FALSE; /* Return value */ FUNC_ENTER_API(H5Zfilter_avail, FAIL) H5TRACE1("t","Zf",id); /* Check args */ if(id<0 || id>H5Z_FILTER_MAX) HGOTO_ERROR (H5E_ARGS, H5E_BADVALUE, FAIL, "invalid filter identification number") /* Is the filter already registered? */ for(i=0; i 0) { unsigned chunk_ndims; /* # of chunk dimensions */ size_t chunk_size[H5O_LAYOUT_NDIMS]; /* Size of chunk dimensions */ hsize_t chunk_dims[H5O_LAYOUT_NDIMS]; /* Size of chunk dimensions */ H5S_t *space; /* Dataspace describing chunk */ hid_t space_id; /* ID for dataspace describing chunk */ size_t u; /* Local index variable */ /* Get chunk information */ if(H5P_get(dc_plist, H5D_CRT_CHUNK_DIM_NAME, &chunk_ndims) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't retrieve chunk dimensions") if(H5P_get(dc_plist, H5D_CRT_CHUNK_SIZE_NAME, chunk_size) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't retrieve chunk size") /* Create a data space for a chunk & set the extent */ for(u=0; ucan_apply) { herr_t status; /* Make callback to filter's "can apply" function */ status=(fclass->can_apply)(dcpl_id, type_id, space_id); /* Check return value */ if(status<=0) { /* We're leaving, so close dataspace */ if(H5I_dec_ref(space_id)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTRELEASE, FAIL, "unable to close dataspace") /* Indicate filter can't apply to this combination of parameters */ if(status==0) { HGOTO_ERROR(H5E_PLINE, H5E_CANAPPLY, FAIL, "filter parameters not appropriate") } /* end if */ /* Indicate error during filter callback */ else { HGOTO_ERROR(H5E_PLINE, H5E_CANAPPLY, FAIL, "error during user callback") } /* end if */ } /* end if */ } /* end if */ break; case H5Z_PRELUDE_SET_LOCAL: /* Check if there is a "set local" callback */ if(fclass->set_local) { /* Make callback to filter's "set local" function */ if((fclass->set_local)(dcpl_id, type_id, space_id)<0) { /* We're leaving, so close dataspace */ if(H5I_dec_ref(space_id)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTRELEASE, FAIL, "unable to close dataspace") /* Indicate error during filter callback */ HGOTO_ERROR(H5E_PLINE, H5E_SETLOCAL, FAIL, "error during user callback") } /* end if */ } /* end if */ break; default: assert("invalid prelude type" && 0); } /* end switch */ } /* end else */ } /* end for */ /* Close dataspace */ if(H5I_dec_ref(space_id)<0) HGOTO_ERROR (H5E_PLINE, H5E_CANTRELEASE, FAIL, "unable to close dataspace") } /* end if */ } /* end if */ } /* end if */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_prelude_callback() */ /*------------------------------------------------------------------------- * Function: H5Z_can_apply * * Purpose: Checks if all the filters defined in the dataset creation * property list can be applied to a particular combination of * datatype and dataspace for a dataset. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Thursday, April 3, 2003 * * Notes: * The chunk dimensions are used to create a dataspace, instead * of passing in the dataset's dataspace, since the chunk * dimensions are what the I/O filter will actually see * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Z_can_apply (hid_t dcpl_id, hid_t type_id) { herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5Z_can_apply,FAIL) assert (H5I_GENPROP_LST==H5I_get_type(dcpl_id)); assert (H5I_DATATYPE==H5I_get_type(type_id)); /* Make "can apply" callbacks for filters in pipeline */ if(H5Z_prelude_callback(dcpl_id, type_id, H5Z_PRELUDE_CAN_APPLY)<0) HGOTO_ERROR(H5E_PLINE, H5E_CANAPPLY, FAIL, "unable to apply filter") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_can_apply() */ /*------------------------------------------------------------------------- * Function: H5Z_set_local * * Purpose: Makes callbacks to modify dataset creation list property * settings for filters on a new dataset, based on the datatype * and dataspace of that dataset (chunk). * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Friday, April 4, 2003 * * Notes: * The chunk dimensions are used to create a dataspace, instead * of passing in the dataset's dataspace, since the chunk * dimensions are what the I/O filter will actually see * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Z_set_local (hid_t dcpl_id, hid_t type_id) { herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5Z_set_local,FAIL) assert (H5I_GENPROP_LST==H5I_get_type(dcpl_id)); assert (H5I_DATATYPE==H5I_get_type(type_id)); /* Make "set local" callbacks for filters in pipeline */ if(H5Z_prelude_callback(dcpl_id, type_id, H5Z_PRELUDE_SET_LOCAL)<0) HGOTO_ERROR(H5E_PLINE, H5E_SETLOCAL, FAIL, "local filter parameters not set") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_set_local() */ /*------------------------------------------------------------------------- * Function: H5Z_modify * * Purpose: Modify filter parameters for specified pipeline. * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Friday, April 5, 2003 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Z_modify(const H5O_pline_t *pline, H5Z_filter_t filter, unsigned flags, size_t cd_nelmts, const unsigned int cd_values[/*cd_nelmts*/]) { size_t idx; /* Index of filter in pipeline */ size_t i; /* Local index variable */ herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5Z_modify, FAIL) assert(pline); assert(filter>=0 && filter<=H5Z_FILTER_MAX); assert(0==(flags & ~((unsigned)H5Z_FLAG_DEFMASK))); assert(0==cd_nelmts || cd_values); /* Locate the filter in the pipeline */ for(idx=0; idxnused; idx++) if(pline->filter[idx].id==filter) break; /* Check if the filter was not already in the pipeline */ if(idx>pline->nused) HGOTO_ERROR(H5E_PLINE, H5E_NOTFOUND, FAIL, "filter not in pipeline") /* Change parameters for filter */ pline->filter[idx].flags = flags; pline->filter[idx].cd_nelmts = cd_nelmts; /* Free any existing parameters */ if(pline->filter[idx].cd_values!=NULL) H5MM_xfree(pline->filter[idx].cd_values); /* Set parameters */ if (cd_nelmts>0) { pline->filter[idx].cd_values = H5MM_malloc(cd_nelmts*sizeof(unsigned)); if (NULL==pline->filter[idx].cd_values) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for filter parameters") for (i=0; ifilter[idx].cd_values[i] = cd_values[i]; } /* end if */ else pline->filter[idx].cd_values = NULL; done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_modify() */ /*------------------------------------------------------------------------- * Function: H5Z_append * * Purpose: Append another filter to the specified pipeline. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Tuesday, August 4, 1998 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Z_append(H5O_pline_t *pline, H5Z_filter_t filter, unsigned flags, size_t cd_nelmts, const unsigned int cd_values[/*cd_nelmts*/]) { size_t idx, i; herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5Z_append, FAIL) assert(pline); assert(filter>=0 && filter<=H5Z_FILTER_MAX); assert(0==(flags & ~((unsigned)H5Z_FLAG_DEFMASK))); assert(0==cd_nelmts || cd_values); /* * Check filter limit. We do it here for early warnings although we may * decide to relax this restriction in the future. */ if (pline->nused>=H5Z_MAX_NFILTERS) HGOTO_ERROR(H5E_PLINE, H5E_CANTINIT, FAIL, "too many filters in pipeline") /* Allocate additional space in the pipeline if it's full */ if (pline->nused>=pline->nalloc) { H5O_pline_t x; x.nalloc = MAX(H5Z_MAX_NFILTERS, 2*pline->nalloc); x.filter = H5MM_realloc(pline->filter, x.nalloc*sizeof(x.filter[0])); if (NULL==x.filter) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for filter pipeline") pline->nalloc = x.nalloc; pline->filter = x.filter; } /* Add the new filter to the pipeline */ idx = pline->nused; pline->filter[idx].id = filter; pline->filter[idx].flags = flags; pline->filter[idx].name = NULL; /*we'll pick it up later*/ pline->filter[idx].cd_nelmts = cd_nelmts; if (cd_nelmts>0) { pline->filter[idx].cd_values = H5MM_malloc(cd_nelmts*sizeof(unsigned)); if (NULL==pline->filter[idx].cd_values) HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for filter") for (i=0; ifilter[idx].cd_values[i] = cd_values[i]; } else { pline->filter[idx].cd_values = NULL; } pline->nused++; done: FUNC_LEAVE_NOAPI(ret_value) } /*------------------------------------------------------------------------- * Function: H5Z_find_idx * * Purpose: Given a filter ID return the offset in the global array * that holds all the registered filters. * * Return: Success: Non-negative index of entry in global filter table. * Failure: Negative * * Programmer: Quincey Koziol * Friday, April 5, 2003 * * Modifications: * *------------------------------------------------------------------------- */ static int H5Z_find_idx(H5Z_filter_t id) { size_t i; /* Local index variable */ int ret_value=FAIL; /* Return value */ FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5Z_find_idx) for (i=0; ifilter[].flags). The filters are processed in * definition order unless the H5Z_FLAG_REVERSE is set. The * FILTER_MASK is a bit-mask to indicate which filters to skip * and on exit will indicate which filters failed. Each * filter has an index number in the pipeline and that index * number is the filter's bit in the FILTER_MASK. NBYTES is the * number of bytes of data to filter and on exit should be the * number of resulting bytes while BUF_SIZE holds the total * allocated size of the buffer, which is pointed to BUF. * * If the buffer must grow during processing of the pipeline * then the pipeline function should free the original buffer * and return a fresh buffer, adjusting BUF_SIZE accordingly. * * Return: Non-negative on success/Negative on failure * * Programmer: Robb Matzke * Tuesday, August 4, 1998 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Z_pipeline(const H5O_pline_t *pline, unsigned flags, unsigned *filter_mask/*in,out*/, H5Z_EDC_t edc_read, H5Z_cb_t cb_struct, size_t *nbytes/*in,out*/, size_t *buf_size/*in,out*/, void **buf/*in,out*/) { size_t i, idx, new_nbytes; int fclass_idx; /* Index of filter class in global table */ H5Z_class_t *fclass=NULL; /* Filter class pointer */ #ifdef H5Z_DEBUG H5Z_stats_t *fstats=NULL; /* Filter stats pointer */ H5_timer_t timer; #endif unsigned failed = 0; unsigned tmp_flags; herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5Z_pipeline, FAIL) assert(0==(flags & ~((unsigned)H5Z_FLAG_INVMASK))); assert(filter_mask); assert(nbytes && *nbytes>0); assert(buf_size && *buf_size>0); assert(buf && *buf); assert(!pline || pline->nusednused; i>0; --i) { idx = i-1; if (*filter_mask & ((unsigned)1<filter[idx].id))<0) { HGOTO_ERROR(H5E_PLINE, H5E_READERROR, FAIL, "required filter is not registered") } fclass=&H5Z_table_g[fclass_idx]; #ifdef H5Z_DEBUG fstats=&H5Z_stat_table_g[fclass_idx]; H5_timer_begin(&timer); #endif tmp_flags=flags|(pline->filter[idx].flags); tmp_flags|=(edc_read== H5Z_DISABLE_EDC) ? H5Z_FLAG_SKIP_EDC : 0; new_nbytes = (fclass->filter)(tmp_flags, pline->filter[idx].cd_nelmts, pline->filter[idx].cd_values, *nbytes, buf_size, buf); #ifdef H5Z_DEBUG H5_timer_end(&(fstats->stats[1].timer), &timer); fstats->stats[1].total += MAX(*nbytes, new_nbytes); if (0==new_nbytes) fstats->stats[1].errors += *nbytes; #endif if(0==new_nbytes) { if((cb_struct.func && (H5Z_CB_FAIL==cb_struct.func(pline->filter[idx].id, *buf, *buf_size, cb_struct.op_data))) || !cb_struct.func) HGOTO_ERROR(H5E_PLINE, H5E_READERROR, FAIL, "filter returned failure during read") *nbytes = *buf_size; failed |= (unsigned)1 << idx; H5E_clear(); } else { *nbytes = new_nbytes; } } } else if (pline) { /* Write */ for (idx=0; idxnused; idx++) { if (*filter_mask & ((unsigned)1<filter[idx].id))<0) { /* Check if filter is optional -- If it isn't, then error */ if ((pline->filter[idx].flags & H5Z_FLAG_OPTIONAL) == 0) HGOTO_ERROR(H5E_PLINE, H5E_WRITEERROR, FAIL, "required filter is not registered") failed |= (unsigned)1 << idx; H5E_clear(); continue; /*filter excluded*/ } fclass=&H5Z_table_g[fclass_idx]; #ifdef H5Z_DEBUG fstats=&H5Z_stat_table_g[fclass_idx]; H5_timer_begin(&timer); #endif new_nbytes = (fclass->filter)(flags|(pline->filter[idx].flags), pline->filter[idx].cd_nelmts, pline->filter[idx].cd_values, *nbytes, buf_size, buf); #ifdef H5Z_DEBUG H5_timer_end(&(fstats->stats[0].timer), &timer); fstats->stats[0].total += MAX(*nbytes, new_nbytes); if (0==new_nbytes) fstats->stats[0].errors += *nbytes; #endif if(0==new_nbytes) { if (0==(pline->filter[idx].flags & H5Z_FLAG_OPTIONAL)) { if((cb_struct.func && (H5Z_CB_FAIL==cb_struct.func(pline->filter[idx].id, *buf, *nbytes, cb_struct.op_data))) || !cb_struct.func) HGOTO_ERROR(H5E_PLINE, H5E_WRITEERROR, FAIL, "filter returned failure") *nbytes = *buf_size; } failed |= (unsigned)1 << idx; H5E_clear(); } else { *nbytes = new_nbytes; } } } *filter_mask = failed; done: FUNC_LEAVE_NOAPI(ret_value) } /*------------------------------------------------------------------------- * Function: H5Z_filter_info * * Purpose: Get pointer to filter info for pipeline * * Return: Non-negative on success/Negative on failure * * Programmer: Quincey Koziol * Friday, April 5, 2003 * * Modifications: * *------------------------------------------------------------------------- */ H5Z_filter_info_t * H5Z_filter_info(const H5O_pline_t *pline, H5Z_filter_t filter) { size_t idx; /* Index of filter in pipeline */ H5Z_filter_info_t *ret_value; /* Return value */ FUNC_ENTER_NOAPI(H5Z_filter_info, NULL) assert(pline); assert(filter>=0 && filter<=H5Z_FILTER_MAX); /* Locate the filter in the pipeline */ for(idx=0; idxnused; idx++) if(pline->filter[idx].id==filter) break; /* Check if the filter was not already in the pipeline */ if(idx>pline->nused) HGOTO_ERROR(H5E_PLINE, H5E_NOTFOUND, NULL, "filter not in pipeline") /* Set return value */ ret_value=&pline->filter[idx]; done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_filter_info() */ /*------------------------------------------------------------------------- * Function: H5Z_all_filters_avail * * Purpose: Verify that all the filters in a pipeline are currently * available (i.e. registered) * * Return: Non-negative (TRUE/FALSE) on success/Negative on failure * * Programmer: Quincey Koziol * Tuesday, April 8, 2003 * * Modifications: * *------------------------------------------------------------------------- */ htri_t H5Z_all_filters_avail(const H5O_pline_t *pline) { size_t i,j; /* Local index variable */ htri_t ret_value=TRUE; /* Return value */ FUNC_ENTER_NOAPI(H5Z_all_filters_avail, FAIL) /* Check args */ assert(pline); /* Iterate through all the filters in pipeline */ for(i=0; inused; i++) { /* Look for each filter in the list of registered filters */ for(j=0; jfilter[i].id) break; /* Check if we didn't find the filter */ if(j==H5Z_table_used_g) HGOTO_DONE(FALSE) } /* end for */ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5Z_all_filters_avail() */ /*------------------------------------------------------------------------- * Function: H5Z_delete * * Purpose: Delete filter FILTER from pipeline PLINE; * deletes all filters if FILTER is H5Z_FILTER_NONE * * Return: Non-negative on success/Negative on failure * * Programmer: Pedro Vicente * Monday, January 26, 2004 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Z_delete(H5O_pline_t *pline, H5Z_filter_t filter) { herr_t ret_value=SUCCEED; /* Return value */ FUNC_ENTER_NOAPI(H5Z_delete, FAIL) /* Check args */ assert(pline); assert(filter>=0 && filter<=H5Z_FILTER_MAX); /* if the pipeline has no filters, just return */ if(pline->nused==0) HGOTO_DONE(SUCCEED) /* Delete all filters */ if (H5Z_FILTER_ALL==filter) { if(H5O_reset(H5O_PLINE_ID, pline)<0) HGOTO_ERROR(H5E_PLINE, H5E_CANTFREE, FAIL, "can't release pipeline info") } /* end if */ /* Delete filter */ else { size_t idx; /* Index of filter in pipeline */ unsigned found=0; /* Indicate filter was found in pipeline */ /* Locate the filter in the pipeline */ for(idx=0; idxnused; idx++) if(pline->filter[idx].id==filter) { found=1; break; } /* filter was not found in the pipeline */ if (!found) HGOTO_ERROR(H5E_PLINE, H5E_NOTFOUND, FAIL, "filter not in pipeline") /* Free information for deleted filter */ H5MM_xfree(pline->filter[idx].name); H5MM_xfree(pline->filter[idx].cd_values); /* Remove filter from pipeline array */ if((idx+1)nused) HDmemcpy(&pline->filter[idx], &pline->filter[idx+1], sizeof (H5Z_filter_info_t)*(pline->nused-(idx+1))); /* Decrement number of used filters */ pline->nused--; /* Reset information for previous last filter in pipeline */ HDmemset(&pline->filter[pline->nused], 0, sizeof (H5Z_filter_info_t)); } /* end else */ done: FUNC_LEAVE_NOAPI(ret_value) } /*------------------------------------------------------------------------- * Function: H5Zget_filter_info * * Purpose: Gets information about a pipeline data filter and stores it * in filter_config_flags. * * Return: zero on success / negative on failure * * Programmer: James Laird and Nat Furrer * Monday, June 7, 2004 * * Modifications: * *------------------------------------------------------------------------- */ herr_t H5Zget_filter_info(H5Z_filter_t filter, unsigned int *filter_config_flags) { herr_t ret_value = SUCCEED; FUNC_ENTER_API(H5Zget_filter_info, FAIL) if (filter_config_flags != NULL) { if (filter == H5Z_FILTER_SZIP) { *filter_config_flags = 0; #ifdef H5_HAVE_FILTER_SZIP if(SZ_encoder_enabled()>0) *filter_config_flags |= H5Z_FILTER_CONFIG_ENCODE_ENABLED; #endif /* H5_HAVE_FILTER_SZIP */ *filter_config_flags |= H5Z_FILTER_CONFIG_DECODE_ENABLED; } else *filter_config_flags = H5Z_FILTER_CONFIG_DECODE_ENABLED | H5Z_FILTER_CONFIG_ENCODE_ENABLED; /* Make sure the filter exists */ if (H5Z_find(filter) == NULL) *filter_config_flags = 0; } done: FUNC_LEAVE_API(ret_value) }