/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * Programmer: Raymond Lu * October 14, 2001 * * Purpose: Tests the H5Tget_native_type function. */ #include "h5test.h" const char *FILENAME[] = { "ntypes", NULL }; #define DIM0 100 #define DIM1 200 #define DIM3 20 int ipoints2[DIM0][DIM1], icheck2[DIM0][DIM1]; short spoints2[DIM0][DIM1], scheck2[DIM0][DIM1]; int ipoints3[DIM0][DIM1][5], icheck3[DIM0][DIM1][5]; #define DSET_ATOMIC_NAME_1 "atomic_type_1" #define DSET_ATOMIC_NAME_2 "atomic_type_2" #define DSET_ATOMIC_NAME_3 "atomic_type_3" #define DSET_ATOMIC_NAME_4 "atomic_type_4" #define DSET_ATOMIC_NAME_5 "atomic_type_5" #define DSET_COMPOUND_NAME "compound_type" #define DSET_COMPOUND_NAME_2 "compound_type_2" #define DSET_COMPOUND_NAME_3 "compound_type_3" #define DSET_COMPOUND_NAME_4 "compound_type_4" #define DSET_ENUM_NAME "enum_type" #define DSET_ARRAY_NAME "array_type" #define DSET_ARRAY2_NAME "array_type_2" #define DSET_VL_NAME "vl_type" #define DSET_VLSTR_NAME "vlstr_type" #define DSET_STR_NAME "str_type" #define DSET_OPAQUE_NAME "opaque_type" #define DSET_BITFIELD_NAME "bitfield_type" #define SPACE1_DIM1 4 #define SPACE1_RANK 1 #define SPACE2_RANK 2 #define SPACE2_DIM1 10 #define SPACE2_DIM2 10 /*------------------------------------------------------------------------- * Function: test_atomic_dtype * * Purpose: Test H5Tget_native_type for atomic datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_atomic_dtype(hid_t file) { hid_t dataset, space; hid_t dtype, native_type; int i, j, n; hsize_t dims[2]; void *tmp; TESTING("atomic datatype"); /* Initialize the dataset */ for(i = n = 0; i < DIM0; i++) for(j = 0; j < DIM1; j++) ipoints2[i][j] = n++; /* Create the data space */ dims[0] = DIM0; dims[1] = DIM1; if((space = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /*------------------- Test data values ------------------------*/ /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_ATOMIC_NAME_1, H5T_STD_I32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, ipoints2) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_ATOMIC_NAME_1, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Verify the datatype retrieved and converted */ if(H5Tget_order(native_type) != H5Tget_order(H5T_NATIVE_INT)) TEST_ERROR; if(H5Tget_size(native_type) < H5Tget_size(H5T_STD_I32BE)) TEST_ERROR; if(H5T_INTEGER != H5Tget_class(native_type)) TEST_ERROR; /* Read the dataset back. The temporary buffer is for special platforms * like Cray. */ tmp = malloc((size_t)(DIM0 * DIM1 * H5Tget_size(native_type))); if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; /* Copy data from temporary buffer to destination buffer */ memcpy(icheck2, tmp, (size_t)(DIM0 * DIM1 * H5Tget_size(native_type))); free(tmp); /* Convert to the integer type */ if(H5Tconvert(native_type, H5T_NATIVE_INT, (DIM0*DIM1), icheck2, NULL, H5P_DEFAULT) < 0) TEST_ERROR; /* Check that the values read are the same as the values written */ for(i = 0; i < DIM0; i++) for(j = 0; j < DIM1; j++) if(ipoints2[i][j] != icheck2[i][j]) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } /* end if */ if(H5Dclose(dataset) < 0) TEST_ERROR; if(H5Tclose(native_type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; /*------------------ Test different data types ----------------*/ /* Create the dataset of H5T_STD_I64LE */ if((dataset = H5Dcreate2(file, DSET_ATOMIC_NAME_2, H5T_STD_I64LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Verify the datatype retrieved and converted */ if(H5Tget_order(native_type) != H5Tget_order(H5T_NATIVE_LLONG)) TEST_ERROR; if(H5Tget_size(native_type) < H5Tget_size(H5T_STD_I64LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(native_type)) TEST_ERROR; if(H5Dclose(dataset) < 0) TEST_ERROR; if(H5Tclose(native_type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; /* Create the dataset of H5T_STD_I8LE */ if((dataset = H5Dcreate2(file, DSET_ATOMIC_NAME_3, H5T_STD_I8LE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_ASCEND)) < 0) TEST_ERROR; /* Verify the datatype retrieved and converted */ if(H5Tget_order(native_type) != H5Tget_order(H5T_NATIVE_CHAR)) TEST_ERROR; if(H5Tget_size(native_type) < H5Tget_size(H5T_STD_I8LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(native_type)) TEST_ERROR; if(H5Dclose(dataset) < 0) TEST_ERROR; if(H5Tclose(native_type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; /* Create the dataset of H5T_IEEE_F32BE */ if((dataset = H5Dcreate2(file, DSET_ATOMIC_NAME_4, H5T_IEEE_F32BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DESCEND)) < 0) TEST_ERROR; /* Verify the datatype retrieved and converted */ if(H5Tget_order(native_type) != H5Tget_order(H5T_NATIVE_FLOAT)) TEST_ERROR; if(H5Tget_size(native_type) < H5Tget_size(H5T_IEEE_F32BE)) TEST_ERROR; if(H5T_FLOAT!=H5Tget_class(native_type)) TEST_ERROR; if(H5Dclose(dataset) < 0) TEST_ERROR; if(H5Tclose(native_type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; /* Create the dataset of H5T_IEEE_F64BE */ if((dataset = H5Dcreate2(file, DSET_ATOMIC_NAME_5, H5T_IEEE_F64BE, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DESCEND)) < 0) TEST_ERROR; /* Verify the datatype retrieved and converted */ if(H5Tget_order(native_type) != H5Tget_order(H5T_NATIVE_DOUBLE)) TEST_ERROR; if(H5Tget_size(native_type) < H5Tget_size(H5T_IEEE_F64BE)) TEST_ERROR; if(H5T_FLOAT != H5Tget_class(native_type)) TEST_ERROR; if(H5Dclose(dataset) < 0) TEST_ERROR; if(H5Tclose(native_type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; PASSED(); return 0; error: return -1; } /*------------------------------------------------------------------------- * Function: test_compound_dtype2 * * Purpose: Test H5Tget_native_type for compound datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_compound_dtype2(hid_t file) { typedef struct s2 { short c2; long l2; } s2; typedef struct s1 { char c; int i; s2 st; unsigned long_long l; } s1; hid_t dataset, space; hid_t dtype, native_type, tid, tid2, tid_m, tid_m2, mem_id, nest_mem_id; int i, j, n; hsize_t dims[2]; s1 *temp_point, *temp_check; s1 *points=NULL, *check=NULL; void *tmp, *bkg; TESTING("nested compound datatype"); /* Allocate space for the points & check arrays */ if(NULL == (points = (s1 *)HDmalloc(sizeof(s1) * DIM0 * DIM1))) TEST_ERROR; if(NULL == (check = (s1 *)HDcalloc(sizeof(s1), DIM0 * DIM1))) TEST_ERROR; /* Initialize the dataset */ for (i = n = 0, temp_point=points; i < DIM0; i++) { for (j = 0; j < DIM1; j++,temp_point++) { temp_point->c = 't'; temp_point->i = n++; temp_point->st.c2 = (short)(i + j); temp_point->st.l2 = (i * 5 + j * 50) * n; temp_point->l = (unsigned long_long)((i * 10 + j * 100) * n); } } /* Create the data space */ dims[0] = DIM0; dims[1] = DIM1; if((space = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /* Create compound datatype for disk storage */ #if H5_SIZEOF_LONG==4 if((tid2=H5Tcreate(H5T_COMPOUND, 6)) < 0) TEST_ERROR; if((tid=H5Tcreate(H5T_COMPOUND, 19)) < 0) TEST_ERROR; #elif H5_SIZEOF_LONG==8 if((tid2=H5Tcreate(H5T_COMPOUND, 10)) < 0) TEST_ERROR; if((tid=H5Tcreate(H5T_COMPOUND, 23)) < 0) TEST_ERROR; #else #error "Unknown 'long' size" #endif /* Insert and pack members */ if(H5Tinsert(tid2, "c2", 0, H5T_STD_I16BE) < 0) TEST_ERROR; #if H5_SIZEOF_LONG == 4 if(H5Tinsert(tid2, "l2", 2, H5T_STD_I32LE) < 0) TEST_ERROR; #elif H5_SIZEOF_LONG == 8 if(H5Tinsert(tid2, "l2", 2, H5T_STD_I64LE) < 0) TEST_ERROR; #else #error "Unknown 'long' size" #endif if(H5Tinsert(tid, "c", 0, H5T_STD_U8LE) < 0) TEST_ERROR; if(H5Tinsert(tid, "i", 1, H5T_STD_I32LE) < 0) TEST_ERROR; if(H5Tinsert(tid, "st", 5, tid2) < 0) TEST_ERROR; #if H5_SIZEOF_LONG == 4 if(H5Tinsert(tid, "l", 11, H5T_STD_U64BE) < 0) TEST_ERROR; #elif H5_SIZEOF_LONG == 8 if(H5Tinsert(tid, "l", 15, H5T_STD_U64BE) < 0) TEST_ERROR; #else #error "Unknown 'long' size" #endif /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_COMPOUND_NAME_2, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create compound datatype for memory */ if((tid_m2 = H5Tcreate(H5T_COMPOUND, sizeof(s2))) < 0) TEST_ERROR; if((tid_m = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) TEST_ERROR; /* Insert members */ if(H5Tinsert(tid_m2, "c2", HOFFSET(s2, c2), H5T_NATIVE_SHORT) < 0) TEST_ERROR; if(H5Tinsert(tid_m2, "l2", HOFFSET(s2, l2), H5T_NATIVE_LONG) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "c", HOFFSET(s1, c), H5T_NATIVE_UCHAR) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "i", HOFFSET(s1, i), H5T_NATIVE_INT) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "st", HOFFSET(s1, st), tid_m2) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "l", HOFFSET(s1, l), H5T_NATIVE_ULLONG) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, points) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_COMPOUND_NAME_2, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Verify the datatype of each field retrieved and converted */ /* check the char member */ if((mem_id = H5Tget_member_type(native_type, 0)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_UCHAR)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_U8LE)) TEST_ERROR; if(H5T_INTEGER != H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* check the integer member */ if((mem_id = H5Tget_member_type(native_type, 1)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_INT)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I32LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* check the long long member */ if((mem_id = H5Tget_member_type(native_type, 3)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_ULLONG)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_U64BE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* check the nested compound member */ if((nest_mem_id = H5Tget_member_type(native_type, 2)) < 0) TEST_ERROR; if((mem_id = H5Tget_member_type(nest_mem_id, 0)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_SHORT)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I16BE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); if((mem_id = H5Tget_member_type(nest_mem_id, 1)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_LONG)) TEST_ERROR; #if H5_SIZEOF_LONG==4 if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I32LE)) TEST_ERROR; #elif H5_SIZEOF_LONG==8 if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I64LE)) TEST_ERROR; #else #error "Unknown 'long' size" #endif if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = malloc(DIM0*DIM1*H5Tget_size(native_type)); if((bkg=calloc(sizeof(s1),DIM0*DIM1))==NULL) TEST_ERROR; if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; memcpy(check, tmp, DIM0*DIM1*H5Tget_size(native_type)); free(tmp); if(H5Tconvert(native_type, tid_m, (DIM0*DIM1), check, bkg, H5P_DEFAULT)) TEST_ERROR; free(bkg); /* Check that the values read are the same as the values written */ for (i = 0, temp_point=points, temp_check=check; i < DIM0; i++) { for (j = 0; j < DIM1; j++, temp_point++,temp_check++) { if(temp_point->c != temp_check->c || temp_point->i != temp_check->i || temp_point->st.c2 != temp_check->st.c2 || temp_point->st.l2 != temp_check->st.l2 || temp_point->l != temp_check->l ) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } } } /* Close temporary datatypes */ if(H5Tclose(tid2) < 0) TEST_ERROR; if(H5Tclose(tid) < 0) TEST_ERROR; if(H5Tclose(tid_m2) < 0) TEST_ERROR; /* Close HDF5 objects */ H5Dclose(dataset); H5Tclose(dtype); H5Tclose(native_type); H5Tclose(tid_m); /* Free memory for test data */ free(points); free(check); PASSED(); return 0; error: if(points!=NULL) free(points); if(check!=NULL) free(check); return -1; } /*------------------------------------------------------------------------- * Function: test_compound_dtype * * Purpose: Test H5Tget_native_type for compound datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_compound_dtype(hid_t file) { typedef struct { char c; unsigned int i; long_long l; } s1; hid_t dataset, space; hid_t dtype, native_type, tid, tid2, mem_id; int i, j, n; hsize_t dims[2]; s1 *temp_point, *temp_check; s1 *points, *check; void *tmp, *bkg; TESTING("compound datatype"); /* Allocate space for the points & check arrays */ if(NULL == (points = (s1 *)HDmalloc(sizeof(s1) * DIM0 * DIM1))) TEST_ERROR; if(NULL == (check = (s1 *)HDcalloc(sizeof(s1), DIM0 * DIM1))) TEST_ERROR; /* Initialize the dataset */ for(i = n = 0, temp_point=points; i < DIM0; i++) for(j = 0; j < DIM1; j++,temp_point++) { temp_point->c = 't'; temp_point->i = (unsigned int)(n++); temp_point->l = (i*10+j*100)*n; } /* end for */ /* Create the data space */ dims[0] = DIM0; dims[1] = DIM1; if((space = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /* Create compound datatype for disk storage */ if((tid = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) TEST_ERROR; /* Insert members */ if(H5Tinsert(tid, "c", 0, H5T_STD_U8LE) < 0) TEST_ERROR; if(H5Tinsert(tid, "i", 1, H5T_STD_U32LE) < 0) TEST_ERROR; if(H5Tinsert(tid, "l", 5, H5T_STD_I64BE) < 0) TEST_ERROR; /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_COMPOUND_NAME, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create compound datatype for datatype in memory */ if((tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) TEST_ERROR; if(H5Tinsert(tid2, "c", HOFFSET(s1, c), H5T_NATIVE_UCHAR) < 0) TEST_ERROR; if(H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_UINT) < 0) TEST_ERROR; if(H5Tinsert(tid2, "l", HOFFSET(s1, l), H5T_NATIVE_LLONG) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, points) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_COMPOUND_NAME, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Verify the datatype of each field retrieved and converted */ if((mem_id = H5Tget_member_type(native_type, 0)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_UCHAR)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_U8LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); if((mem_id = H5Tget_member_type(native_type, 1)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_UINT)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_U32LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); if((mem_id = H5Tget_member_type(native_type, 2)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_LLONG)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I64BE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = malloc(DIM0*DIM1*H5Tget_size(native_type)); bkg = calloc(sizeof(s1),DIM0*DIM1); if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; memcpy(check, tmp, DIM0*DIM1*H5Tget_size(native_type)); free(tmp); if(H5Tconvert(native_type, tid2, (DIM0*DIM1), check, bkg, H5P_DEFAULT) < 0) TEST_ERROR; free(bkg); /* Check that the values read are the same as the values written */ for (i = 0, temp_point=points, temp_check=check; i < DIM0; i++) { for (j = 0; j < DIM1; j++, temp_point++,temp_check++) { if(temp_point->c != temp_check->c || temp_point->i != temp_check->i || temp_point->l != temp_check->l ) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } } } /* Close datatype */ if(H5Tclose(tid) < 0) TEST_ERROR; H5Dclose(dataset); H5Tclose(dtype); H5Tclose(native_type); H5Tclose(tid2); /* Free memory for test data */ free(points); free(check); PASSED(); return 0; error: return -1; } /*------------------------------------------------------------------------- * Function: test_compound_dtype3 * * Purpose: Test H5Tget_native_type for compound datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_compound_dtype3(hid_t file) { typedef struct { char c; int a[5]; long_long l; } s1; hid_t dataset, space; hid_t dtype, native_type, tid, tid2, tid_m, tid_m2, mem_id, nest_mem_id; hsize_t array_dims[1]={5}; int i, j, k, n; hsize_t dims[2]; s1 *temp_point, *temp_check; s1 *points=NULL, *check=NULL; void *tmp, *bkg; TESTING("compound datatype with array as field"); /* Allocate space for the points & check arrays */ if(NULL == (points = (s1 *)HDmalloc(sizeof(s1) * DIM0 * DIM1))) TEST_ERROR; if(NULL == (check = (s1 *)HDcalloc(sizeof(s1), DIM0 * DIM1))) TEST_ERROR; /* Initialize the dataset */ for(i = n = 0, temp_point=points; i < DIM0; i++) for(j = 0; j < DIM1; j++,temp_point++) { temp_point->c = 't'; temp_point->l = (i*10+j*100)*n; for(k = 0; k < 5; k++) (temp_point->a)[k] = n++; } /* end for */ /* Create the data space */ dims[0] = DIM0; dims[1] = DIM1; if((space = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /* Create array datatype */ if((tid2 = H5Tarray_create2(H5T_STD_I32LE, 1, array_dims)) < 0) TEST_ERROR; /* Create compound datatype for disk storage */ if((tid = H5Tcreate(H5T_COMPOUND, 29)) < 0) TEST_ERROR; /* Insert members */ if(H5Tinsert(tid, "c", 0, H5T_STD_U8LE) < 0) TEST_ERROR; if(H5Tinsert(tid, "a", 1, tid2) < 0) TEST_ERROR; if(H5Tinsert(tid, "l", 21, H5T_STD_I64BE) < 0) TEST_ERROR; /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_COMPOUND_NAME_3, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create array datatype */ if((tid_m2 = H5Tarray_create2(H5T_NATIVE_INT, 1, array_dims)) < 0) TEST_ERROR; /* Create compound datatype for datatype in memory */ if((tid_m = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "c", HOFFSET(s1, c), H5T_NATIVE_UCHAR) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "a", HOFFSET(s1, a), tid_m2) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "l", HOFFSET(s1, l), H5T_NATIVE_LLONG) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, points) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid) < 0) TEST_ERROR; if(H5Tclose(tid2) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_COMPOUND_NAME_3, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Verify the datatype of each field retrieved and converted */ /* check the char member */ if((mem_id = H5Tget_member_type(native_type, 0)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_UCHAR)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_U8LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* check the array member */ if((mem_id = H5Tget_member_type(native_type, 1)) < 0) TEST_ERROR; if(H5T_ARRAY!=H5Tget_class(mem_id)) TEST_ERROR; if((nest_mem_id = H5Tget_super(mem_id)) < 0) TEST_ERROR; if(H5Tget_order(nest_mem_id) != H5Tget_order(H5T_NATIVE_INT)) TEST_ERROR; if(H5Tget_size(nest_mem_id) < H5Tget_size(H5T_STD_I32LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(nest_mem_id)) TEST_ERROR; H5Tclose(nest_mem_id); H5Tclose(mem_id); /* check the long long member */ if((mem_id = H5Tget_member_type(native_type, 2)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_LLONG)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I64BE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = malloc(DIM0*DIM1*H5Tget_size(native_type)); if((bkg=calloc(sizeof(s1),DIM0*DIM1))==NULL) TEST_ERROR; if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; memcpy(check, tmp, DIM0*DIM1*H5Tget_size(native_type)); free(tmp); if(H5Tconvert(native_type, tid_m, (DIM0*DIM1), check, bkg, H5P_DEFAULT)) TEST_ERROR; free(bkg); /* Check that the values read are the same as the values written */ for (i = 0, temp_point=points, temp_check=check; i < DIM0; i++) { for (j = 0; j < DIM1; j++, temp_point++,temp_check++) { if(temp_point->c != temp_check->c || temp_point->l != temp_check->l ) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } for (k = 0; k < 5; k++) { if(temp_point->a[k] != temp_check->a[k]) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d,%d\n", i, j, k); goto error; } } } } H5Dclose(dataset); H5Tclose(dtype); H5Tclose(native_type); H5Tclose(tid_m); H5Tclose(tid_m2); /* Free memory for test data */ free(points); free(check); PASSED(); return 0; error: return -1; } /*------------------------------------------------------------------------- * Function: test_compound_opaque * * Purpose: Test H5Tget_native_type for compound datatype with opaque field * * Return: Success: 0 * * Failure: -1 * * Programmer: Quincey Koziol * January 31, 2004 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_compound_opaque(hid_t file) { typedef struct { char c; unsigned char o[5]; long_long l; } s1; hid_t dataset, space; hid_t dtype, native_type, tid, tid2, tid_m, mem_id; int i, j, k, n; hsize_t dims[2]; s1 *temp_point, *temp_check; s1 *points=NULL, *check=NULL; void *tmp, *bkg; TESTING("compound datatype with opaque field"); /* Allocate space for the points & check arrays */ if(NULL == (points = (s1 *)HDmalloc(sizeof(s1) * DIM0 * DIM1))) TEST_ERROR; if(NULL == (check = (s1 *)HDcalloc(sizeof(s1), DIM0 * DIM1))) TEST_ERROR; /* Initialize the dataset */ for(i = n = 0, temp_point=points; i < DIM0; i++) for(j = 0; j < DIM1; j++,temp_point++) { temp_point->c = 't'; temp_point->l = (i*10+j*100)*n; for(k = 0; k < 5; k++) (temp_point->o)[k] = (unsigned char)(n++); } /* end for */ /* Create the data space */ dims[0] = DIM0; dims[1] = DIM1; if((space = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /* Create opaque datatype */ if((tid2 = H5Tcreate(H5T_OPAQUE, sizeof(temp_point->o))) < 0) TEST_ERROR; if(H5Tset_tag(tid2, "testing opaque field") < 0) TEST_ERROR; /* Create compound datatype for disk storage */ if((tid = H5Tcreate(H5T_COMPOUND, 14)) < 0) TEST_ERROR; /* Insert members */ if(H5Tinsert(tid, "c", 0, H5T_STD_U8LE) < 0) TEST_ERROR; if(H5Tinsert(tid, "o", 1, tid2) < 0) TEST_ERROR; if(H5Tinsert(tid, "l", 6, H5T_STD_I64BE) < 0) TEST_ERROR; /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_COMPOUND_NAME_4, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create compound datatype for datatype in memory */ if((tid_m = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "c", HOFFSET(s1, c), H5T_NATIVE_UCHAR) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "o", HOFFSET(s1, o), tid2) < 0) TEST_ERROR; if(H5Tinsert(tid_m, "l", HOFFSET(s1, l), H5T_NATIVE_LLONG) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, points) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid) < 0) TEST_ERROR; if(H5Tclose(tid2) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_COMPOUND_NAME_4, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Verify the datatype of each field retrieved and converted */ /* check the char member */ if((mem_id = H5Tget_member_type(native_type, 0)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_UCHAR)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_U8LE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* check the array member */ if((mem_id = H5Tget_member_type(native_type, 1)) < 0) TEST_ERROR; if(H5T_OPAQUE!=H5Tget_class(mem_id)) TEST_ERROR; if(H5Tget_size(mem_id) != sizeof(temp_point->o)) TEST_ERROR; H5Tclose(mem_id); /* check the long long member */ if((mem_id = H5Tget_member_type(native_type, 2)) < 0) TEST_ERROR; if(H5Tget_order(mem_id) != H5Tget_order(H5T_NATIVE_LLONG)) TEST_ERROR; if(H5Tget_size(mem_id) < H5Tget_size(H5T_STD_I64BE)) TEST_ERROR; if(H5T_INTEGER!=H5Tget_class(mem_id)) TEST_ERROR; H5Tclose(mem_id); /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = HDmalloc(DIM0*DIM1*H5Tget_size(native_type)); if((bkg=HDcalloc(sizeof(s1),DIM0*DIM1))==NULL) TEST_ERROR; if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; HDmemcpy(check, tmp, DIM0*DIM1*H5Tget_size(native_type)); HDfree(tmp); if(H5Tconvert(native_type, tid_m, (DIM0*DIM1), check, bkg, H5P_DEFAULT)) TEST_ERROR; HDfree(bkg); /* Check that the values read are the same as the values written */ for (i = 0, temp_point=points, temp_check=check; i < DIM0; i++) { for (j = 0; j < DIM1; j++, temp_point++,temp_check++) { if(temp_point->c != temp_check->c || temp_point->l != temp_check->l ) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } for (k = 0; k < 5; k++) { if(temp_point->o[k] != temp_check->o[k]) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d,%d\n", i, j, k); goto error; } } } } H5Dclose(dataset); H5Tclose(dtype); H5Tclose(native_type); H5Tclose(tid_m); /* Free memory for test data */ HDfree(points); HDfree(check); PASSED(); return 0; error: return -1; } /*------------------------------------------------------------------------- * Function: test_enum_dtype * * Purpose: Test H5Tget_native_type for enumerate datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_enum_dtype(hid_t file) { hid_t dataset, space; hid_t tid, tid_m, dtype, native_type; int i, j, n; hsize_t dims[2]; void *tmp; short colors[8]; unsigned char sub_colors[16]; const char *mname[] = { "RED", "GREEN", "BLUE", "YELLOW", "PINK", "PURPLE", "ORANGE", "WHITE" }; TESTING("enum datatype"); /* Initialize the dataset */ for(i = 0; i < DIM0; i++) for(j = 0, n = 0; j < DIM1; j++, n++) spoints2[i][j] = (short)((i * 10 + j * 100 + n) % 8); /* Create the data space */ dims[0] = DIM0; dims[1] = DIM1; if((space = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /* Construct enum type based on native type */ if((tid = H5Tenum_create(H5T_STD_I16LE)) < 0) TEST_ERROR; for(i = 0; i < 8; i++) { sub_colors[i * 2] = (unsigned char)i; sub_colors[i * 2 + 1] = 0; if(H5Tenum_insert(tid, mname[i], &(sub_colors[i*2])) < 0) TEST_ERROR; } /* end for */ /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_ENUM_NAME, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Construct enum type based on native type in memory */ if((tid_m = H5Tenum_create(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; for(i = 0; i < 8; i++) { colors[i] = (short)i; if(H5Tenum_insert(tid_m, mname[i], &(colors[i])) < 0) TEST_ERROR; } /* end for */ /* Write the data to the dataset */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, spoints2) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_ENUM_NAME, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = malloc(DIM0 * DIM1 * H5Tget_size(native_type)); if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; memcpy(scheck2, tmp, DIM0 * DIM1 * H5Tget_size(native_type)); free(tmp); if(H5Tconvert(native_type, tid_m, (DIM0*DIM1), scheck2, NULL, H5P_DEFAULT) < 0) TEST_ERROR; /* Check that the values read are the same as the values written */ for (i = 0; i < DIM0; i++) { for (j = 0; j < DIM1; j++) { if(spoints2[i][j] != scheck2[i][j]) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); printf(" spoints2[i][j]=%hd, scheck2[i][j]=%hd\n", spoints2[i][j], scheck2[i][j]); goto error; } } } H5Dclose(dataset); H5Tclose(dtype); H5Tclose(native_type); H5Tclose(tid_m); PASSED(); return 0; error: return -1; } /*------------------------------------------------------------------------- * Function: test_array_dtype * * Purpose: Test H5Tget_native_type for array datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_array_dtype(hid_t file) { typedef struct { char c; int i; long_long l; } s1; hid_t dataset, space; hid_t dtype, native_type, tid, tid2, tid3, tid_m; int i, j, k, n; hsize_t space_dims[2], array_dims[1]={5}; s1 *temp_point, *temp_check; s1 *points=NULL, *check=NULL; void *tmp; TESTING("array of compound datatype"); /* Allocate space for the points & check arrays */ if(NULL == (points = (s1 *)HDmalloc(sizeof(s1) * DIM0 * DIM1 * 5))) TEST_ERROR; if(NULL == (check = (s1 *)HDcalloc(sizeof(s1), DIM0 * DIM1 * 5))) TEST_ERROR; /* Initialize the dataset */ for(i = n = 0, temp_point=points; i < DIM0; i++) for(j = 0; j < DIM1; j++) for(k = 0; k < 5; k++,temp_point++) { temp_point->c= 't'; temp_point->i= n++; temp_point->l= (i*10+j*100)*n; } /* Create the data space */ space_dims[0] = DIM0; space_dims[1] = DIM1; if((space = H5Screate_simple(2, space_dims, NULL)) < 0) TEST_ERROR; /* Create compound datatype for disk storage */ if((tid2 = H5Tcreate(H5T_COMPOUND, 13)) < 0) TEST_ERROR; /* Insert members */ if(H5Tinsert(tid2, "c", 0, H5T_STD_U8BE) < 0) TEST_ERROR; if(H5Tinsert(tid2, "i", 1, H5T_STD_U32LE) < 0) TEST_ERROR; if(H5Tinsert(tid2, "l", 5, H5T_STD_I64BE) < 0) TEST_ERROR; /* Create array datatype for disk storage */ if((tid = H5Tarray_create2(tid2, 1, array_dims)) < 0) TEST_ERROR; /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_ARRAY_NAME, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create compound datatype for datatype in memory */ if((tid3 = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) TEST_ERROR; if(H5Tinsert(tid3, "c", HOFFSET(s1, c), H5T_NATIVE_UCHAR) < 0) TEST_ERROR; if(H5Tinsert(tid3, "i", HOFFSET(s1, i), H5T_NATIVE_UINT) < 0) TEST_ERROR; if(H5Tinsert(tid3, "l", HOFFSET(s1, l), H5T_NATIVE_LLONG) < 0) TEST_ERROR; /* Create array datatype for memory */ if((tid_m = H5Tarray_create2(tid3, 1, array_dims)) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, points) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid) < 0) TEST_ERROR; if(H5Tclose(tid2) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_ARRAY_NAME, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = HDmalloc(DIM0 * DIM1 * H5Tget_size(native_type)); if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; memcpy(check, tmp, DIM0 * DIM1 * H5Tget_size(native_type)); free(tmp); if(H5Tconvert(native_type, tid_m, (DIM0*DIM1), check, NULL, H5P_DEFAULT) < 0) TEST_ERROR; /* Check that the values read are the same as the values written */ for (i = 0, temp_point=points, temp_check=check; i < DIM0; i++) { for (j = 0; j < DIM1; j++) { for (k = 0; k < 5; k++, temp_point++,temp_check++) { if(temp_point->c != temp_check->c || temp_point->i != temp_check->i || temp_point->l != temp_check->l ) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } } } } /* Close HDF5 objects */ if(H5Dclose(dataset)) TEST_ERROR; if(H5Tclose(native_type)) TEST_ERROR; if(H5Tclose(dtype)) TEST_ERROR; if(H5Tclose(tid_m) < 0) TEST_ERROR; if(H5Tclose(tid3) < 0) TEST_ERROR; /* Free memory for test data */ free(points); free(check); PASSED(); return 0; error: if(points!=NULL) free(points); if(check!=NULL) free(check); return -1; } /*------------------------------------------------------------------------- * Function: test_array_dtype2 * * Purpose: Test H5Tget_native_type for array datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_array_dtype2(hid_t file) { hid_t dataset, space; hid_t dtype, native_type, tid, tid_m; int i, j, k, n; hsize_t space_dims[2], array_dims[1]={5}; void *tmp; TESTING("array of atomic datatype"); /* Initialize the dataset */ for(i = n = 0;i < DIM0; i++) for(j = 0; j < DIM1; j++) for(k = 0; k < 5; k++) ipoints3[i][j][k] = n++; /* Create the data space */ space_dims[0] = DIM0; space_dims[1] = DIM1; if((space = H5Screate_simple(2, space_dims, NULL)) < 0) TEST_ERROR; /* Create array datatype for disk storage */ if((tid = H5Tarray_create2(H5T_STD_I32LE, 1, array_dims)) < 0) TEST_ERROR; /* Create the dataset */ if((dataset = H5Dcreate2(file, DSET_ARRAY2_NAME, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create array datatype for memory */ if((tid_m = H5Tarray_create2(H5T_NATIVE_INT, 1, array_dims)) < 0) TEST_ERROR; /* Write the data to the dataset */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, ipoints3) < 0) TEST_ERROR; /* Close dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid) < 0) TEST_ERROR; /* Close dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; /* Open dataset again to check H5Tget_native_type */ if((dataset = H5Dopen2(file, DSET_ARRAY2_NAME, H5P_DEFAULT)) < 0) TEST_ERROR; if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Read the dataset back. Temporary buffer is for special platforms like * Cray */ tmp = HDmalloc(DIM0 * DIM1 * H5Tget_size(native_type)); if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp) < 0) TEST_ERROR; memcpy(icheck3, tmp, DIM0 * DIM1 * H5Tget_size(native_type)); free(tmp); if(H5Tconvert(native_type, tid_m, (DIM0*DIM1), icheck3, NULL, H5P_DEFAULT) < 0) TEST_ERROR; /* Check that the values read are the same as the values written */ for (i = 0; i < DIM0; i++) { for (j = 0; j < DIM1; j++) { for (k = 0; k < 5; k++) { if(icheck3[i][j][k] != ipoints3[i][j][k]) { H5_FAILED(); printf(" Read different values than written.\n"); printf(" At index %d,%d\n", i, j); goto error; } } } } /* Close HDF5 objects */ if(H5Dclose(dataset)) TEST_ERROR; if(H5Tclose(native_type)) TEST_ERROR; if(H5Tclose(dtype)) TEST_ERROR; if(H5Tclose(tid_m) < 0) TEST_ERROR; PASSED(); return 0; error: return -1; } /*------------------------------------------------------------------------- * Function: test_vl_dtype * * Purpose: Test H5Tget_native_type for variable length datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_vl_dtype(hid_t file) { hvl_t wdata[SPACE1_DIM1]; /* Information to write */ hvl_t rdata[SPACE1_DIM1]; /* Information read in */ hvl_t *t1, *t2; /* Temporary pointer to VL information */ hsize_t dims1[] = {SPACE1_DIM1}; hid_t dataset, space; hid_t dtype, native_type, nat_super_type, tid, tid2, tid_m, tid_m2; size_t i, j, k; void* *tmp; TESTING("variable length datatype"); /* Allocate and initialize VL data to write */ for(i=0; ip = HDmalloc((j + 1) * sizeof(unsigned int)); if(t1->p==NULL) { H5_FAILED(); printf(" Cannot allocate memory for VL data! i=%u, j=%u\n",(unsigned)i,(unsigned)j); goto error; } /* end if */ t1->len=j+1; for(k=0; k<(j+1); k++) { ((unsigned int *)t1->p)[k]=(unsigned int)(i*100+j*10+k); } } /* end for */ } /* end for */ /* Create dataspace for datasets */ if((space = H5Screate_simple(SPACE1_RANK, dims1, NULL)) < 0) TEST_ERROR; /* Create the base VL type */ if((tid2 = H5Tvlen_create (H5T_STD_U32LE)) < 0) TEST_ERROR; /* Create a VL datatype for disk storage */ if((tid = H5Tvlen_create(tid2)) < 0) TEST_ERROR /* Create a dataset */ if((dataset = H5Dcreate2(file, DSET_VL_NAME, tid, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create a base VL datatype for memory */ if((tid_m2 = H5Tvlen_create(H5T_NATIVE_UINT)) < 0) TEST_ERROR; /* Create a VL datatype for memory */ if((tid_m = H5Tvlen_create (tid_m2)) < 0) TEST_ERROR; /* Write dataset to disk */ if(H5Dwrite(dataset, tid_m, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata) < 0) TEST_ERROR; /* Close Dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid2) < 0) TEST_ERROR; if(H5Tclose(tid) < 0) TEST_ERROR; /* Open a dataset */ if((dataset = H5Dopen2(file, DSET_VL_NAME, H5P_DEFAULT)) < 0) TEST_ERROR; /* Get native datatype for dataset */ if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Also get native base type for this nested VL type. Should be an integer type. */ if((nat_super_type = H5Tget_super(native_type)) < 0) TEST_ERROR; if((nat_super_type = H5Tget_super(nat_super_type)) < 0) TEST_ERROR; /* Read dataset from disk */ if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata) < 0) TEST_ERROR; /* Compare data read in */ for(i = 0; i < SPACE1_DIM1; i++) { if(wdata[i].len != rdata[i].len) { H5_FAILED(); printf(" VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len); goto error; } /* end if */ for(t1 = (hvl_t *)wdata[i].p, t2 = (hvl_t *)rdata[i].p, j = 0; jlen != t2->len) { H5_FAILED(); printf(" VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len); goto error; } /* end if */ /* use temporary buffer to convert datatype. This is for special * platforms like Cray */ tmp = (void **)HDmalloc(t2->len * sizeof(unsigned int)); HDmemcpy(tmp, t2->p, t2->len * H5Tget_size(nat_super_type)); if(H5Tconvert(nat_super_type, H5T_NATIVE_UINT, t2->len, tmp, NULL, H5P_DEFAULT)) TEST_ERROR; for(k=0; klen; k++) { if( ((unsigned int *)t1->p)[k] != ((unsigned int *)tmp)[k] ) { H5_FAILED(); printf(" VL data don't match!, wdata[%u].p=%d, rdata[%u].p=%u\n", (unsigned)i,((unsigned int*)t1->p)[k],(unsigned)i,((unsigned int*)tmp)[k]); goto error; } } /* end for */ free(tmp); } /* end for */ } /* end for */ /* Reclaim the read VL data */ if(H5Dvlen_reclaim(native_type,space,H5P_DEFAULT,rdata) < 0) TEST_ERROR; /* Reclaim the write VL data */ if(H5Dvlen_reclaim(native_type,space,H5P_DEFAULT,wdata) < 0) TEST_ERROR; /* Close Dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(native_type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; if(H5Tclose(tid_m) < 0) TEST_ERROR; if(H5Tclose(tid_m2) < 0) TEST_ERROR; /* Close disk dataspace */ if(H5Sclose(space) < 0) TEST_ERROR; PASSED(); return 0; error: return -1; } /* end test_vl_type() */ /*------------------------------------------------------------------------- * Function: test_vlstr_dtype * * Purpose: Test H5Tget_native_type for variable length string datatype * * Return: Success: 0 * * Failure: -1 * * Programmer: Raymond Lu * October 15, 2002 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_vlstr_dtype(hid_t file) { const char *wdata[SPACE1_DIM1]= { "Four score and seven years ago our forefathers brought forth on this continent a new nation,", "conceived in liberty and dedicated to the proposition that all men are created equal.", "Now we are engaged in a great civil war,", "testing whether that nation or any nation so conceived and so dedicated can long endure." }; /* Information to write */ char *rdata[SPACE1_DIM1]; /* Information read in */ hid_t dataset; /* Dataset ID */ hid_t sid1; /* Dataspace ID */ hid_t tid1,dtype,native_type; /* Datatype ID */ hsize_t dims1[] = {SPACE1_DIM1}; unsigned i; /* counting variable */ /* Output message about test being performed */ TESTING("variable length string datatype"); /* Create dataspace for datasets */ if((sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL)) < 0) TEST_ERROR; /* Create a datatype to refer to */ if((tid1 = H5Tcopy(H5T_C_S1)) < 0) TEST_ERROR; if(H5Tset_size(tid1,H5T_VARIABLE) < 0) TEST_ERROR; if(H5T_STRING != H5Tget_class(tid1) || !H5Tis_variable_str(tid1)) TEST_ERROR; /* Create a dataset */ if((dataset = H5Dcreate2(file, DSET_VLSTR_NAME, tid1, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Write dataset to disk */ if(H5Dwrite(dataset, tid1, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata) < 0) TEST_ERROR; /* Close Dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Open a dataset */ if((dataset = H5Dopen2(file, DSET_VLSTR_NAME, H5P_DEFAULT)) < 0) TEST_ERROR; /* Get datatype for dataset */ if((dtype = H5Dget_type(dataset)) < 0) TEST_ERROR; /* Construct native type */ if((native_type = H5Tget_native_type(dtype, H5T_DIR_DEFAULT)) < 0) TEST_ERROR; /* Check if the data type is equal */ if(!H5Tequal(native_type, tid1)) TEST_ERROR; /* Read dataset from disk */ if(H5Dread(dataset, native_type, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata) < 0) TEST_ERROR; /* Compare data read in */ for(i = 0; i < SPACE1_DIM1; i++) { if(HDstrlen(wdata[i]) != HDstrlen(rdata[i])) { H5_FAILED(); printf(" VL data length don't match!, strlen(wdata[%d])=%d, strlen(rdata[%d])=%d\n", (int)i,(int)strlen(wdata[i]),(int)i,(int)strlen(rdata[i])); goto error; } /* end if */ if(HDstrcmp(wdata[i], rdata[i]) != 0 ) { H5_FAILED(); printf(" VL data values don't match!, wdata[%d]=%s, rdata[%d]=%s\n", (int)i,wdata[i],(int)i,rdata[i]); goto error; } /* end if */ } /* end for */ /* Close Dataset */ if(H5Dclose(dataset) < 0) TEST_ERROR; /* Close datatype */ if(H5Tclose(tid1) < 0) TEST_ERROR; if(H5Tclose(native_type) < 0) TEST_ERROR; /* Close disk dataspace */ if(H5Sclose(sid1) < 0) TEST_ERROR; /* Free memory for rdata */ for(i=0; i 0) { H5_FAILED(); puts(" Bit field isn't supported. Should have failed."); TEST_ERROR; } /* end if */ if(H5Tclose(type) < 0) TEST_ERROR; if(H5Tclose(dtype) < 0) TEST_ERROR; if(H5Dclose(dataset) < 0) TEST_ERROR; PASSED(); return 0; error: return -1; } /* test_bitfield_dtype */ /*------------------------------------------------------------------------- * Function: test_ninteger * * Purpose: Test the native integer function; made to check the case * like the Cray SV1, where the size of short is 8 but precision is 32 * * Return: Success: 0 * Failure: -1 * * Programmer: pvn@ncsa.uiuc.edu * September 3, 2004 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t test_ninteger(void) { hid_t fid1=(-1); /* file ID */ hid_t fid2=(-1); /* file ID */ hid_t did1=(-1); /* dataset ID */ hid_t did2=(-1); /* dataset ID */ hid_t sid1=(-1); /* dataspace ID */ hid_t dcpl1=(-1); /* dataset creation property list ID */ hid_t dcpl2=(-1); /* dataset creation property list ID */ hid_t tid1=(-1); /* file datatype */ hid_t tid2=(-1); /* file datatype */ hid_t nid1=(-1); /* native datatype */ hid_t nid2=(-1); /* native datatype */ hsize_t dims[1]={DIM3}; /* dataspace dimensions */ hsize_t nelmts; /* number of elements in dataset */ int rank=1; /* rank of dataset */ int buf[DIM3]; int chk[DIM3]; int i; for (i=0; i