/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * Purpose: Test H5Ocopy(). */ #include "testhdf5.h" #include "H5srcdir.h" #include "H5Iprivate.h" #include "H5Pprivate.h" #include "H5VLprivate.h" /* Virtual Object Layer */ #define H5F_FRIEND /*suppress error about including H5Fpkg */ #define H5F_TESTING #include "H5Fpkg.h" /* File access */ /* * This file needs to access private information from the H5S package. * This file also needs to access the dataspace testing code. */ #define H5S_FRIEND /*suppress error about including H5Spkg */ #define H5S_TESTING #include "H5Spkg.h" /* Dataspaces */ /* * This file needs to access private information from the H5P package. * This file also needs to access the property list testing code. */ #define H5P_FRIEND /*suppress error about including H5Ppkg */ #define H5P_TESTING #include "H5Ppkg.h" /* Property Lists */ /* * This file needs to access private information from the H5D package. * This file also needs to access the dataset testing code. */ #define H5D_FRIEND /*suppress error about including H5Dpkg */ #define H5D_TESTING #include "H5Dpkg.h" /* Datasets */ /* * This file needs to access private information from the H5O package. * This file also needs to access the dataspace testing code. */ #define H5O_FRIEND /*suppress error about including H5Opkg */ #define H5O_TESTING #include "H5Opkg.h" /* Object header */ static const char *FILENAME[] = {"objcopy_src", "objcopy_dst", "objcopy_ext", "objcopy_src2", "verbound_src", "verbound_dst", NULL}; /* Configuration, really a series of bit flags. Maximum value is all three * bit flags enabled. */ #define CONFIG_SHARE_SRC 1 #define CONFIG_SHARE_DST 2 #define CONFIG_SRC_NEW_FORMAT 4 #define CONFIG_DST_NEW_FORMAT 8 #define CONFIG_DENSE 16 #define MAX_CONFIGURATION 31 #define FILE_EXT "objcopy_ext.dat" /* The fill_old.h5 is generated from gen_old_fill.c in HDF5 'test' directory * for version 1.4(after 1.4.3). To get this data file, simply compile * gen_old_fill.c with HDF5 library (before v1.5) and run it. */ #define FILE_OLD_LAYOUT "fill_old.h5" #define NAME_DATATYPE_SIMPLE "H5T_NATIVE_INT" #define NAME_DATATYPE_SIMPLE2 "H5T_NATIVE_INT-2" #define NAME_DATATYPE_VL "vlen of int" #define NAME_DATATYPE_VL_VL "vlen of vlen of int" #define NAME_DATASET_SIMPLE "dataset_simple" #define NAME_DATASET_SIMPLE2 "dataset_simple_copy" #define NAME_DATASET_SIMPLE3 "dataset_simple_another_copy" #define NAME_DATASET_COMPOUND "dataset_compound" #define NAME_DATASET_CHUNKED "dataset_chunked" #define NAME_DATASET_CHUNKED_SINGLE "dataset_chunked_single" #define NAME_DATASET_CHUNKED2 "dataset_chunked2" #define NAME_DATASET_CHUNKED2_SINGLE "dataset_chunked2_single" #define NAME_DATASET_CHUNKED3 "dataset_chunked3" #define NAME_DATASET_CHUNKED3_SINGLE "dataset_chunked3_single" #define NAME_DATASET_CHUNKED4 "dataset_chunked4" #define NAME_DATASET_CHUNKED4_SINGLE "dataset_chunked4_single" #define NAME_DATASET_COMPACT "dataset_compact" #define NAME_DATASET_EXTERNAL "dataset_ext" #define NAME_DATASET_NAMED_DTYPE "dataset_named_dtype" #define NAME_DATASET_NAMED_DTYPE2 "dataset_named_dtype2" #define NAME_DATASET_MULTI_OHDR "dataset_multi_ohdr" #define NAME_DATASET_MULTI_OHDR2 "dataset_multi_ohdr2" #define NAME_DATASET_VL "dataset_vl" #define NAME_DATASET_VL2 "dataset_vl2" #define NAME_DATASET_VL_VL "dataset_vl_vl" #define NAME_DATASET_VL_VL2 "dataset_vl_vl2" #define NAME_DATASET_CMPD_VL "dataset_cmpd_vl" #define NAME_DATASET_SUB_SUB "/g0/g00/g000/dataset_simple" #define NAME_GROUP_UNCOPIED "/uncopied" #define NAME_GROUP_EMPTY "/empty" #define NAME_GROUP_TOP "/g0" #define NAME_GROUP_TOP2 "/g1" #define NAME_GROUP_TOP3 "/g2" #define NAME_GROUP_TOP4 "/g3" #define NAME_GROUP_SUB "/g0/g00" #define NAME_GROUP_SUB_2 "/g0/g01" #define NAME_GROUP_SUB_SUB "/g0/g00/g000" #define NAME_GROUP_SUB_SUB2 "g000" #define NAME_GROUP_DATASET "/g0/dataset_simple" #define NAME_GROUP_LINK "/g_links" #define NAME_GROUP_LINK2 "/g_links2" #define NAME_GROUP_LOOP "g_loop" #define NAME_GROUP_LOOP2 "g_loop2" #define NAME_GROUP_LOOP3 "g_loop3" #define NAME_GROUP_REF "ref_grp" #define NAME_LINK_DATASET "/g_links/dataset_simple" #define NAME_LINK_HARD "/g_links/hard_link_to_dataset_simple" #define NAME_LINK_SOFT "/g_links/soft_link_to_dataset_simple" #define NAME_LINK_SOFT2 "/g_links2/soft_link_to_dataset_simple" #define NAME_LINK_EXTERN "/g_links/external_link_to_dataset_simple" #define NAME_LINK_EXTERN2 "/g_links2/external_link_to_dataset_simple" #define NAME_LINK_SOFT_DANGLE "/g_links/soft_link_to_nowhere" #define NAME_LINK_SOFT_DANGLE2 "/g_links2/soft_link_to_nowhere" #define NAME_LINK_EXTERN_DANGLE "/g_links/external_link_to_nowhere" #define NAME_LINK_EXTERN_DANGLE2 "/g_links2/external_link_to_nowhere" #define NAME_OLD_FORMAT "/dset1" #define NAME_BUF_SIZE 1024 #define ATTR_NAME_LEN 80 #define DIM_SIZE_1 12 #define DIM_SIZE_2 6 #define MAX_DIM_SIZE_1 100 #define MAX_DIM_SIZE_2 80 #define CHUNK_SIZE_1 5 /* Not an even fraction of dimension sizes, so we test copying partial chunks */ #define CHUNK_SIZE_2 5 #define NUM_SUB_GROUPS 20 #define NUM_WIDE_LOOP_GROUPS 10 #define NUM_DATASETS 10 #define ATTR_CMPD_STRING "ThisIsAString" char src_obj_full_name[215]; /* the full path + name of the object to be copied */ unsigned num_attributes_g; /* Number of attributes created */ /* Table containing object id and object name */ /* (Used for detecting duplicate objects when comparing groups */ static struct { size_t nalloc; /* number of slots allocated */ size_t nobjs; /* number of objects */ H5O_token_t *obj; /* Tokens of objects seen */ } idtab_g; /* Local function prototypes */ static int compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts, const void *buf1, const void *buf2, hid_t obj_owner); static int compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf); static int compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags); static int compare_idx_type(hid_t fapl, hid_t did, H5D_chunk_index_t new_type, H5D_chunk_index_t old_type); static int test_copy_attribute_compound_vlstr(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl); static int attach_attribute_compound_vlstr(hid_t loc_id); static int compare_attribute_compound_vlstr(hid_t loc, hid_t loc2); /*------------------------------------------------------------------------- * Function: token_insert * * Purpose: Add a token to the table. * * Return: void * *------------------------------------------------------------------------- */ static void token_insert(H5O_info2_t *oi) { size_t n; /* Don't add it if the link count is 1 because such an object can only * be encountered once. */ if (oi->rc < 2) return; /* Extend the table */ if (idtab_g.nobjs >= idtab_g.nalloc) { idtab_g.nalloc = MAX(256, 2 * idtab_g.nalloc); idtab_g.obj = (H5O_token_t *)realloc(idtab_g.obj, idtab_g.nalloc * sizeof(idtab_g.obj[0])); } /* end if */ /* Insert the entry */ n = idtab_g.nobjs++; idtab_g.obj[n] = oi->token; } /* end token_insert() */ /*------------------------------------------------------------------------- * Function: token_lookup * * Purpose: Check if a token has already been encountered * * Return: Success: true/false * Failure: (can't fail) * *------------------------------------------------------------------------- */ static H5_ATTR_PURE bool token_lookup(hid_t loc_id, H5O_info2_t *oi) { size_t n; int token_cmp; if (oi->rc < 2) return false; /*only one link possible*/ for (n = 0; n < idtab_g.nobjs; n++) { if (H5Otoken_cmp(loc_id, &idtab_g.obj[n], &oi->token, &token_cmp) < 0) return false; if (!token_cmp) return true; } return false; } /* end token_lookup() */ /*------------------------------------------------------------------------- * Function: token_reset * * Purpose: Reset the token tracking data structures * * Return: void * *------------------------------------------------------------------------- */ static void token_reset(void) { if (idtab_g.obj) free(idtab_g.obj); idtab_g.obj = NULL; idtab_g.nalloc = idtab_g.nobjs = 0; } /* end token_reset() */ /*------------------------------------------------------------------------- * Function: attach_ref_attr * * Purpose: Create an attribute with object references * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static herr_t attach_ref_attr(hid_t file_id, hid_t loc_id) { char dsetname1[] = "dataset1_pointed_by_ref_attr"; char dsetname2[] = "dataset2_pointed_by_ref_attr"; hid_t did1 = (H5I_INVALID_HID), did2 = (H5I_INVALID_HID), aid = (H5I_INVALID_HID), sid = (H5I_INVALID_HID), sid_ref = (H5I_INVALID_HID); hsize_t dims[2] = {2, 9}; hsize_t dims_ref[1] = {2}; hobj_ref_t ref[2]; int data1[2][9] = {{1, 1, 1, 1, 1, 1, 1, 1, 1}, {1, 1, 1, 1, 1, 1, 1, 1, 18}}; int data2[2][9] = {{2, 2, 2, 2, 2, 2, 2, 2, 2}, {2, 2, 2, 2, 2, 2, 2, 2, 18}}; /* creates two simple datasets */ if ((sid = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; if ((sid_ref = H5Screate_simple(1, dims_ref, NULL)) < 0) TEST_ERROR; if ((did1 = H5Dcreate2(file_id, dsetname1, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did1, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data1) < 0) TEST_ERROR; if ((did2 = H5Dcreate2(file_id, dsetname2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data2) < 0) TEST_ERROR; /* create an attribute with two object references */ if (H5Rcreate(&ref[0], file_id, dsetname1, H5R_OBJECT, (hid_t)-1) < 0) TEST_ERROR; if (H5Rcreate(&ref[1], file_id, dsetname2, H5R_OBJECT, (hid_t)-1) < 0) TEST_ERROR; if ((aid = H5Acreate2(loc_id, "obj_ref_attr", H5T_STD_REF_OBJ, sid_ref, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Awrite(aid, H5T_STD_REF_OBJ, ref) < 0) TEST_ERROR; if (H5Sclose(sid) < 0) TEST_ERROR; if (H5Sclose(sid_ref) < 0) TEST_ERROR; if (H5Dclose(did1) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Sclose(sid_ref); H5Dclose(did1); H5Dclose(did2); H5Aclose(aid); } H5E_END_TRY return (-1); } /*------------------------------------------------------------------------- * Function: attach_reg_ref_attr * * Purpose: Create an attribute with object references * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static herr_t attach_reg_ref_attr(hid_t file_id, hid_t loc_id) { const char dsetnamev[] = "dataset_pointed_by_reg_ref_attr"; hid_t aid = (H5I_INVALID_HID); hid_t space_id = (H5I_INVALID_HID); /* dataspace identifiers */ hid_t spacer_id = (H5I_INVALID_HID); /* dataspace identifiers */ hid_t dsetv_id = (H5I_INVALID_HID); /*dataset identifiers*/ hsize_t dims[2] = {2, 9}; hsize_t dimsr[1] = {2}; int rank = 2; int rankr = 1; hdset_reg_ref_t ref[2]; int data[2][9] = {{1, 1, 2, 3, 3, 4, 5, 5, 999}, {1, 2, 2, 3, 4, 4, 5, 6, 999}}; hsize_t start[2] = {0, 3}; hsize_t count[2] = {2, 3}; hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}}; size_t num_points = 3; /* create a 2D dataset */ if ((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR; if ((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR; if ((dsetv_id = H5Dcreate2(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) TEST_ERROR; /* create reg_ref of block selection */ if (H5Sselect_hyperslab(space_id, H5S_SELECT_SET, start, NULL, count, NULL) < 0) TEST_ERROR; if (H5Rcreate(&ref[0], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR; /* create reg_ref of point selection */ if (H5Sselect_none(space_id) < 0) TEST_ERROR; if (H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t *)coord) < 0) TEST_ERROR; if (H5Rcreate(&ref[1], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR; /* create reg_ref attribute */ if ((aid = H5Acreate2(loc_id, "reg_ref_attr", H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Awrite(aid, H5T_STD_REF_DSETREG, ref) < 0) TEST_ERROR; /* attach the reg_ref attribute to the dataset itself */ if (H5Aclose(aid) < 0) TEST_ERROR; if ((aid = H5Acreate2(dsetv_id, "reg_ref_attr", H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Awrite(aid, H5T_STD_REF_DSETREG, ref) < 0) TEST_ERROR; if (H5Sclose(spacer_id) < 0) TEST_ERROR; if (H5Sclose(space_id) < 0) TEST_ERROR; if (H5Dclose(dsetv_id) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; return 0; error: H5E_BEGIN_TRY { H5Sclose(spacer_id); H5Sclose(space_id); H5Dclose(dsetv_id); H5Aclose(aid); } H5E_END_TRY return (-1); } /*------------------------------------------------------------------------- * Function: create_reg_ref_dataset * * Purpose: Create a dataset with region references * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static herr_t create_reg_ref_dataset(hid_t file_id, hid_t loc_id) { const char dsetnamev[] = "dataset_pointed_by_ref_dset"; const char dsetnamer[] = "dataset_with_reg_ref"; const char dsetnamer1[] = "compact_dataset_with_reg_ref"; const char dsetnamer2[] = "compressed_dataset_with_reg_ref"; hid_t space_id = (H5I_INVALID_HID); /* dataspace identifiers */ hid_t spacer_id = (H5I_INVALID_HID); hid_t dsetv_id = (H5I_INVALID_HID); /*dataset identifiers*/ hid_t dsetr_id = (H5I_INVALID_HID); hsize_t dims[2] = {2, 9}; hsize_t dimsr[1] = {2}; int rank = 2; int rankr = 1; hsize_t chunk_size = 1; hdset_reg_ref_t ref[2]; int data[2][9] = {{1, 1, 2, 3, 3, 4, 5, 5, 6}, {1, 2, 2, 3, 4, 4, 5, 6, 6}}; hsize_t start[2]; hsize_t count[2]; hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}}; size_t num_points = 3; hid_t pid = (H5I_INVALID_HID); if ((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR; if ((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR; if ((dsetv_id = H5Dcreate2(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data) < 0) TEST_ERROR; if ((dsetr_id = H5Dcreate2(loc_id, dsetnamer, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; start[0] = 0; start[1] = 3; count[0] = 2; count[1] = 3; if (H5Sselect_hyperslab(space_id, H5S_SELECT_SET, start, NULL, count, NULL) < 0) TEST_ERROR; if (H5Rcreate(&ref[0], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR; if (H5Sselect_none(space_id) < 0) TEST_ERROR; if (H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t *)coord) < 0) TEST_ERROR; if (H5Rcreate(&ref[1], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR; if (H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref) < 0) TEST_ERROR; if (H5Dclose(dsetr_id) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR; if ((dsetr_id = H5Dcreate2(loc_id, dsetnamer1, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Pclose(pid) < 0) TEST_ERROR; if (H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref) < 0) TEST_ERROR; if (H5Dclose(dsetr_id) < 0) TEST_ERROR; /* create and set comp & chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, &chunk_size) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; if ((dsetr_id = H5Dcreate2(loc_id, dsetnamer2, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Pclose(pid) < 0) TEST_ERROR; if (H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref) < 0) TEST_ERROR; if (H5Dclose(dsetr_id) < 0) TEST_ERROR; if (H5Sclose(space_id) < 0) TEST_ERROR; if (H5Sclose(spacer_id) < 0) TEST_ERROR; if (H5Dclose(dsetv_id) < 0) TEST_ERROR; return 0; error: H5E_BEGIN_TRY { H5Sclose(space_id); H5Sclose(spacer_id); H5Dclose(dsetr_id); H5Dclose(dsetv_id); H5Pclose(pid); } H5E_END_TRY return (-1); } /*------------------------------------------------------------------------- * Function: attach_attribute_vl * * Purpose: Attach an vlen attribute to the object to be copied * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static int test_copy_attach_attribute_vl(hid_t loc_id) { hid_t aid = H5I_INVALID_HID, sid = H5I_INVALID_HID, tid = H5I_INVALID_HID; hvl_t buf[4]; hsize_t dim1 = 4; unsigned int i, j; int ret_value = -1; if ((sid = H5Screate_simple(1, &dim1, NULL)) < 0) goto done; if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) goto done; for (i = 0; i < 4; i++) { buf[i].len = i * 3 + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(j + 1); } /* end for */ if ((aid = H5Acreate2(loc_id, "vlen attribute", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto done; if (H5Awrite(aid, tid, buf) < 0) goto done; ret_value = 0; done: if (tid > 0 && sid > 0) { hid_t dxpl_id = H5Pcreate(H5P_DATASET_XFER); H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL); H5Treclaim(tid, sid, dxpl_id, buf); H5Pclose(dxpl_id); } if (sid > 0) H5Sclose(sid); if (tid > 0) H5Tclose(tid); if (aid > 0) H5Aclose(aid); return ret_value; } /* end of attach_attribute_vl */ /*------------------------------------------------------------------------- * Function: test_copy_attach_attributes * * Purpose: Attach NUM_ATTRIBUTES attributes to the object to be copied * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static int test_copy_attach_attributes(hid_t loc_id, hid_t type_id) { hid_t aid = H5I_INVALID_HID, sid = H5I_INVALID_HID; char attr_name[ATTR_NAME_LEN]; int attr_data[2]; hsize_t dim1 = 2; hid_t acpl = H5I_INVALID_HID; unsigned u; int ret_value = -1; if ((sid = H5Screate_simple(1, &dim1, NULL)) < 0) goto done; /* Create attribute creation plist */ if ((acpl = H5Pcreate(H5P_ATTRIBUTE_CREATE)) < 0) goto done; for (u = 0; u < num_attributes_g; u++) { snprintf(attr_name, sizeof(attr_name), "%u attr", u); /* Set attribute data */ attr_data[0] = (int)(100 * u); attr_data[1] = (int)(200 * u); /* Set attribute character set (alternate) */ if (u % 2) { if (H5Pset_char_encoding(acpl, H5T_CSET_ASCII) < 0) goto done; } /* end if */ else if (H5Pset_char_encoding(acpl, H5T_CSET_UTF8) < 0) goto done; if ((aid = H5Acreate2(loc_id, attr_name, type_id, sid, acpl, H5P_DEFAULT)) < 0) goto done; if (H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done; if (aid > 0) H5Aclose(aid); aid = -1; } ret_value = 0; done: if (sid > 0) H5Sclose(sid); if (aid > 0) H5Aclose(aid); if (acpl > 0) H5Pclose(acpl); return ret_value; } /*------------------------------------------------------------------------- * Function: test_copy_attach_paired_attributes * * Purpose: Attach NUM_ATTRIBUTES attributes to a pair of objects to be copied * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static int test_copy_attach_paired_attributes(hid_t loc_id, hid_t loc_id2, hid_t type_id) { hid_t aid = H5I_INVALID_HID, sid = H5I_INVALID_HID; char attr_name[ATTR_NAME_LEN]; int attr_data[2]; hid_t acpl = H5I_INVALID_HID; unsigned u; hsize_t dim1 = 2; if ((sid = H5Screate_simple(1, &dim1, NULL)) < 0) goto done; /* Create attribute creation plist */ if ((acpl = H5Pcreate(H5P_ATTRIBUTE_CREATE)) < 0) goto done; for (u = 0; u < num_attributes_g; u++) { snprintf(attr_name, sizeof(attr_name), "%u attr", u); /* Set attribute data */ attr_data[0] = (int)(100 * u); attr_data[1] = (int)(200 * u); /* Set attribute character set (alternate) */ if (u % 2) { if (H5Pset_char_encoding(acpl, H5T_CSET_ASCII) < 0) goto done; } /* end if */ else if (H5Pset_char_encoding(acpl, H5T_CSET_UTF8) < 0) goto done; /* Add attribute to first object */ if ((aid = H5Acreate2(loc_id, attr_name, type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto done; if (H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done; if (H5Aclose(aid) < 0) goto done; /* Add attribute to second object */ if ((aid = H5Acreate2(loc_id2, attr_name, type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto done; if (H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done; if (H5Aclose(aid) < 0) goto done; } if (H5Sclose(sid) < 0) goto done; if (H5Pclose(acpl) < 0) goto done; return 0; done: if (sid > 0) H5Sclose(sid); if (aid > 0) H5Aclose(aid); if (acpl > 0) H5Pclose(acpl); return -1; } /* end test_copy_attach_paired_attributes() */ /*------------------------------------------------------------------------- * Function: compare_attribute * * Purpose: Compare two attributes to check that they are equal * * Return: true if attributes are equal/false if they are different * *------------------------------------------------------------------------- */ static int compare_attribute(hid_t aid, hid_t aid2, hid_t pid, const void *wbuf, hid_t obj_owner) { hid_t sid = H5I_INVALID_HID, sid2 = H5I_INVALID_HID; /* Dataspace IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ size_t elmt_size; /* Size of datatype */ htri_t is_committed; /* If the datatype is committed */ htri_t is_committed2; /* If the datatype is committed */ H5A_info_t ainfo; /* Attribute info */ H5A_info_t ainfo2; /* Attribute info */ hssize_t nelmts; /* # of elements in dataspace */ void *rbuf = NULL; /* Buffer for reading raw data */ void *rbuf2 = NULL; /* Buffer for reading raw data */ /* Check the character sets are equal */ if (H5Aget_info(aid, &ainfo) < 0) TEST_ERROR; if (H5Aget_info(aid2, &ainfo2) < 0) TEST_ERROR; if (ainfo.cset != ainfo2.cset) TEST_ERROR; /* Check the creation orders are equal (if appropriate) */ if (ainfo.corder_valid != ainfo2.corder_valid) TEST_ERROR; if (ainfo.corder_valid) if (ainfo.corder != ainfo2.corder) TEST_ERROR; /* Check the datatypes are equal */ /* Open the datatype for the source attribute */ if ((tid = H5Aget_type(aid)) < 0) TEST_ERROR; /* Open the datatype for the destination attribute */ if ((tid2 = H5Aget_type(aid2)) < 0) TEST_ERROR; /* Check that both datatypes are committed/not committed */ if ((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR; if ((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR; if (is_committed != is_committed2) TEST_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* Determine the size of datatype (for later) */ if ((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR; /* Check the dataspaces are equal */ /* Open the dataspace for the source attribute */ if ((sid = H5Aget_space(aid)) < 0) TEST_ERROR; /* Open the dataspace for the destination attribute */ if ((sid2 = H5Aget_space(aid2)) < 0) TEST_ERROR; /* Compare the dataspaces */ if (H5Sextent_equal(sid, sid2) != true) TEST_ERROR; /* Determine the number of elements in dataspace (for later) */ if ((nelmts = H5Sget_simple_extent_npoints(sid2)) < 0) TEST_ERROR; /* Check the raw data is equal */ /* Allocate & initialize space for the raw data buffers */ if ((rbuf = calloc(elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR; if ((rbuf2 = calloc(elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR; /* Read data from the source attribute */ if (H5Aread(aid, tid, rbuf) < 0) TEST_ERROR; /* Read data from the destination attribute */ if (H5Aread(aid2, tid2, rbuf2) < 0) TEST_ERROR; /* Check raw data read in against data written out */ if (wbuf) { if (!compare_data(aid, (hid_t)0, pid, tid, (size_t)nelmts, wbuf, rbuf, obj_owner)) TEST_ERROR; if (!compare_data(aid2, (hid_t)0, pid, tid2, (size_t)nelmts, wbuf, rbuf2, obj_owner)) TEST_ERROR; } /* end if */ /* Don't have written data, just compare data between the two attributes */ else if (!compare_data(aid, aid2, pid, tid, (size_t)nelmts, rbuf, rbuf2, obj_owner)) TEST_ERROR; /* Reclaim vlen data, if necessary */ if (H5Tdetect_class(tid, H5T_VLEN) == true) if (H5Treclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR; if (H5Tdetect_class(tid2, H5T_VLEN) == true) if (H5Treclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR; /* Release raw data buffers */ free(rbuf); rbuf = NULL; free(rbuf2); rbuf2 = NULL; /* close the source dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the destination dataspace */ if (H5Sclose(sid2) < 0) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the destination datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; return true; error: if (rbuf) free(rbuf); if (rbuf2) free(rbuf2); H5E_BEGIN_TRY { H5Sclose(sid2); H5Sclose(sid); H5Tclose(tid2); H5Tclose(tid); } H5E_END_TRY return false; } /* end compare_attribute() */ /*------------------------------------------------------------------------- * Function: compare_std_attributes * * Purpose: Compare "standard" attributes on two objects to check that they are equal * * Return: true if objects have same attributes/false if they are different * * Note: This isn't very general, the attributes are assumed to be * those written in test_copy_attach_attributes(). * *------------------------------------------------------------------------- */ static int compare_std_attributes(hid_t oid, hid_t oid2, hid_t pid) { hid_t aid = H5I_INVALID_HID, aid2 = H5I_INVALID_HID; /* Attribute IDs */ H5O_info2_t oinfo1, oinfo2; /* Object info */ unsigned cpy_flags; /* Object copy flags */ /* Retrieve the object copy flags from the property list, if it's non-DEFAULT */ if (pid != H5P_DEFAULT) { if (H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR; } /* end if */ else cpy_flags = 0; /* Check the number of attributes on source dataset */ if (H5Oget_info3(oid, &oinfo1, H5O_INFO_NUM_ATTRS) < 0) TEST_ERROR; /* Check the number of attributes on destination dataset */ if (H5Oget_info3(oid2, &oinfo2, H5O_INFO_NUM_ATTRS) < 0) TEST_ERROR; if (cpy_flags & H5O_COPY_WITHOUT_ATTR_FLAG) { /* Check that the destination has no attributes */ if (oinfo2.num_attrs != 0) TEST_ERROR; } /* end if */ else { char attr_name[ATTR_NAME_LEN]; /* Attribute name */ unsigned i; /* Local index variable */ /* Compare the number of attributes */ if (oinfo1.num_attrs != oinfo2.num_attrs) TEST_ERROR; /* Check the attributes are equal */ for (i = 0; i < (unsigned)oinfo1.num_attrs; i++) { if ((aid = H5Aopen_by_idx(oid, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)i, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Aget_name(aid, (size_t)ATTR_NAME_LEN, attr_name) < 0) TEST_ERROR; if ((aid2 = H5Aopen(oid2, attr_name, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check the attributes are equal */ if (!compare_attribute(aid, aid2, pid, NULL, oid)) TEST_ERROR; /* Close the attributes */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Aclose(aid2) < 0) TEST_ERROR; } /* end for */ } /* end if */ /* Objects should be the same. :-) */ return true; error: H5E_BEGIN_TRY { H5Aclose(aid2); H5Aclose(aid); } H5E_END_TRY return false; } /* end compare_std_attributes() */ /*------------------------------------------------------------------------- * Function: compare_data * * Purpose: Compare two buffers of data to check that they are equal * * Return: true if buffer are equal/false if they are different * *------------------------------------------------------------------------- */ static int compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts, const void *buf1, const void *buf2, hid_t obj_owner) { size_t elmt_size; /* Size of an element */ /* Check size of each element */ if ((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR; /* If the type is a compound containing a vlen, loop over all elements for * each compound member. Compounds containing reference are not supported * yet. */ if ((H5Tget_class(tid) == H5T_COMPOUND) && (H5Tdetect_class(tid, H5T_VLEN) == true)) { hid_t memb_id; /* Member id */ const uint8_t *memb1; /* Pointer to current member */ const uint8_t *memb2; /* Pointer to current member */ int nmembs; /* Number of members */ size_t memb_off; /* Member offset */ size_t memb_size; /* Member size */ unsigned memb_idx; /* Member index */ size_t elmt; /* Current element */ /* Get number of members in compound */ if ((nmembs = H5Tget_nmembers(tid)) < 0) TEST_ERROR; /* Loop over members */ for (memb_idx = 0; memb_idx < (unsigned)nmembs; memb_idx++) { /* Get member offset. Note that we cannot check for an error here. */ memb_off = H5Tget_member_offset(tid, memb_idx); /* Get member id */ if ((memb_id = H5Tget_member_type(tid, memb_idx)) < 0) TEST_ERROR; /* Get member size */ if ((memb_size = H5Tget_size(memb_id)) == 0) TEST_ERROR; /* Set up pointers to member in the first element */ memb1 = (const uint8_t *)buf1 + memb_off; memb2 = (const uint8_t *)buf2 + memb_off; /* Check if this member contains (or is) a vlen */ if (H5Tget_class(memb_id) == H5T_VLEN) { hid_t base_id; /* vlen base type id */ /* Get base type of vlen datatype */ if ((base_id = H5Tget_super(memb_id)) < 0) TEST_ERROR; /* Iterate over all elements, recursively calling this function * for each */ for (elmt = 0; elmt < nelmts; elmt++) { /* Check vlen lengths */ if (((const hvl_t *)((const void *)memb1))->len != ((const hvl_t *)((const void *)memb2))->len) TEST_ERROR; /* Check vlen data */ if (!compare_data(parent1, parent2, pid, base_id, ((const hvl_t *)((const void *)memb1))->len, ((const hvl_t *)((const void *)memb1))->p, ((const hvl_t *)((const void *)memb2))->p, obj_owner)) TEST_ERROR; /* Update member pointers */ memb1 += elmt_size; memb2 += elmt_size; } /* end for */ } else { /* vlens cannot currently be nested below the top layer of a * compound */ assert(H5Tdetect_class(memb_id, H5T_VLEN) == false); /* Iterate over all elements, calling memcmp() for each */ for (elmt = 0; elmt < nelmts; elmt++) { if (memcmp(memb1, memb2, memb_size) != 0) TEST_ERROR; /* Update member pointers */ memb1 += elmt_size; memb2 += elmt_size; } /* end for */ } /* end else */ } /* end for */ } else if (H5Tdetect_class(tid, H5T_VLEN) == true) { const hvl_t *vl_buf1, *vl_buf2; /* Aliases for buffers to compare */ hid_t base_tid; /* Base type of vlen datatype */ size_t u; /* Local index variable */ /* Check for "simple" vlen datatype */ if (H5Tget_class(tid) != H5T_VLEN) TEST_ERROR; /* Get base type of vlen datatype */ if ((base_tid = H5Tget_super(tid)) < 0) TEST_ERROR; /* Loop over elements in buffers */ vl_buf1 = (const hvl_t *)buf1; vl_buf2 = (const hvl_t *)buf2; for (u = 0; u < nelmts; u++, vl_buf1++, vl_buf2++) { /* Check vlen lengths */ if (vl_buf1->len != vl_buf2->len) TEST_ERROR; /* Check vlen data */ if (!compare_data(parent1, parent2, pid, base_tid, vl_buf1->len, vl_buf1->p, vl_buf2->p, obj_owner)) TEST_ERROR; } /* end for */ if (H5Tclose(base_tid) < 0) TEST_ERROR; } /* end if */ else if (H5Tdetect_class(tid, H5T_REFERENCE) == true) { size_t u; /* Local index variable */ /* Check for "simple" reference datatype */ if (H5Tget_class(tid) != H5T_REFERENCE) TEST_ERROR; /* Check for object or region reference */ if (H5Tequal(tid, H5T_STD_REF_OBJ) > 0) { const hobj_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */ /* Loop over elements in buffers */ ref_buf1 = (const hobj_ref_t *)buf1; ref_buf2 = (const hobj_ref_t *)buf2; for (u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) { hid_t obj1_id, obj2_id; /* IDs for objects referenced */ H5O_type_t obj1_type, obj2_type; /* Types of objects referenced */ /* Check for types of objects handled */ if (H5Rget_obj_type2(parent1, H5R_OBJECT, ref_buf1, &obj1_type) < 0) TEST_ERROR; if (H5Rget_obj_type2(parent2, H5R_OBJECT, ref_buf2, &obj2_type) < 0) TEST_ERROR; if (obj1_type != obj2_type) TEST_ERROR; /* Open referenced objects */ if ((obj1_id = H5Rdereference2(parent1, H5P_DEFAULT, H5R_OBJECT, ref_buf1)) < 0) TEST_ERROR; if ((obj2_id = H5Rdereference2(parent2, H5P_DEFAULT, H5R_OBJECT, ref_buf2)) < 0) TEST_ERROR; /* break the infinite loop when the ref_object points to itself */ if (obj_owner > 0) { H5O_info2_t oinfo1, oinfo2; int token_cmp; if (H5Oget_info3(obj_owner, &oinfo1, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Oget_info3(obj1_id, &oinfo2, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(obj1_id, &oinfo1.token, &oinfo2.token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) { if (H5Oclose(obj1_id) < 0) TEST_ERROR; if (H5Oclose(obj2_id) < 0) TEST_ERROR; return true; } } /* Check for types of objects handled */ switch (obj1_type) { case H5O_TYPE_DATASET: if (compare_datasets(obj1_id, obj2_id, pid, NULL) != true) TEST_ERROR; break; case H5O_TYPE_GROUP: if (compare_groups(obj1_id, obj2_id, pid, -1, 0) != true) TEST_ERROR; break; case H5O_TYPE_NAMED_DATATYPE: if (H5Tequal(obj1_id, obj2_id) != true) TEST_ERROR; break; case H5O_TYPE_MAP: /* Maps not supported in native VOL connector */ case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: default: TEST_ERROR; } /* end switch */ /* Close objects */ if (H5Oclose(obj1_id) < 0) TEST_ERROR; if (H5Oclose(obj2_id) < 0) TEST_ERROR; } /* end for */ } /* end if */ else if (H5Tequal(tid, H5T_STD_REF_DSETREG) > 0) { const hdset_reg_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */ /* Loop over elements in buffers */ ref_buf1 = (const hdset_reg_ref_t *)buf1; ref_buf2 = (const hdset_reg_ref_t *)buf2; for (u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) { hid_t obj1_id, obj2_id; /* IDs for objects referenced */ hid_t obj1_sid, obj2_sid; /* Dataspace IDs for objects referenced */ H5O_type_t obj1_type, obj2_type; /* Types of objects referenced */ /* Check for types of objects handled */ if (H5Rget_obj_type2(parent1, H5R_DATASET_REGION, ref_buf1, &obj1_type) < 0) TEST_ERROR; if (H5Rget_obj_type2(parent2, H5R_DATASET_REGION, ref_buf2, &obj2_type) < 0) TEST_ERROR; if (obj1_type != obj2_type) TEST_ERROR; /* Open referenced objects */ if ((obj1_id = H5Rdereference2(parent1, H5P_DEFAULT, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR; if ((obj2_id = H5Rdereference2(parent2, H5P_DEFAULT, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR; /* break the infinite loop when the ref_object points to itself */ if (obj_owner > 0) { H5O_info2_t oinfo1, oinfo2; int token_cmp; if (H5Oget_info3(obj_owner, &oinfo1, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Oget_info3(obj1_id, &oinfo2, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(obj1_id, &oinfo1.token, &oinfo2.token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) { if (H5Oclose(obj1_id) < 0) TEST_ERROR; if (H5Oclose(obj2_id) < 0) TEST_ERROR; return true; } } /* Check for types of objects handled */ switch (obj1_type) { case H5O_TYPE_DATASET: if (compare_datasets(obj1_id, obj2_id, pid, NULL) != true) TEST_ERROR; break; case H5O_TYPE_GROUP: if (compare_groups(obj1_id, obj2_id, pid, -1, 0) != true) TEST_ERROR; break; case H5O_TYPE_NAMED_DATATYPE: if (H5Tequal(obj1_id, obj2_id) != true) TEST_ERROR; break; case H5O_TYPE_MAP: /* Maps not supported in native VOL connector */ case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: default: TEST_ERROR; } /* end switch */ /* Close objects */ if (H5Oclose(obj1_id) < 0) TEST_ERROR; if (H5Oclose(obj2_id) < 0) TEST_ERROR; /* Get regions for referenced datasets */ if ((obj1_sid = H5Rget_region(parent1, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR; if ((obj2_sid = H5Rget_region(parent2, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR; /* Check if dataspaces are the same shape */ if (H5Sselect_shape_same(obj1_sid, obj2_sid) < 0) TEST_ERROR; /* Close dataspaces */ if (H5Sclose(obj1_sid) < 0) TEST_ERROR; if (H5Sclose(obj2_sid) < 0) TEST_ERROR; } /* end for */ } /* end if */ else TEST_ERROR; } /* end else */ else if (memcmp(buf1, buf2, (elmt_size * nelmts)) != 0) TEST_ERROR; /* Data should be the same. :-) */ return true; error: return false; } /* end compare_data() */ /*------------------------------------------------------------------------- * Function: compare_datasets * * Purpose: Compare two datasets to check that they are equal * * Return: true if datasets are equal/false if they are different * *------------------------------------------------------------------------- */ static int compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf) { hid_t sid = H5I_INVALID_HID, sid2 = H5I_INVALID_HID; /* Dataspace IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ hid_t dcpl = H5I_INVALID_HID, dcpl2 = H5I_INVALID_HID; /* Dataset creation property list IDs */ size_t elmt_size; /* Size of datatype */ htri_t is_committed; /* If the datatype is committed */ htri_t is_committed2; /* If the datatype is committed */ int nfilters; /* Number of filters applied to dataset */ hssize_t nelmts; /* # of elements in dataspace */ void *rbuf = NULL; /* Buffer for reading raw data */ void *rbuf2 = NULL; /* Buffer for reading raw data */ H5D_space_status_t space_status; /* Dataset's raw dataspace status */ H5D_space_status_t space_status2; /* Dataset's raw dataspace status */ /* Check the datatypes are equal */ /* Open the datatype for the source dataset */ if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* Open the datatype for the destination dataset */ if ((tid2 = H5Dget_type(did2)) < 0) TEST_ERROR; /* Check that both datatypes are committed/not committed */ if ((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR; if ((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR; if (is_committed != is_committed2) TEST_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* Determine the size of datatype (for later) */ if ((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR; /* Check the dataspaces are equal */ /* Open the dataspace for the source dataset */ if ((sid = H5Dget_space(did)) < 0) TEST_ERROR; /* Open the dataspace for the destination dataset */ if ((sid2 = H5Dget_space(did2)) < 0) TEST_ERROR; /* Compare the dataspaces */ if (H5Sextent_equal(sid, sid2) != true) TEST_ERROR; /* Determine the number of elements in dataspace (for later) */ if ((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) TEST_ERROR; /* Check the dataset creation property lists are equal */ /* Open the dataset creation property list for the source dataset */ if ((dcpl = H5Dget_create_plist(did)) < 0) TEST_ERROR; /* Open the dataset creation property list for the destination dataset */ if ((dcpl2 = H5Dget_create_plist(did2)) < 0) TEST_ERROR; /* Compare the rest of the dataset creation property lists */ if (H5Pequal(dcpl, dcpl2) != true) TEST_ERROR; /* Get the number of filters on dataset (for later) */ if ((nfilters = H5Pget_nfilters(dcpl)) < 0) TEST_ERROR; /* close the source dataset creation property list */ if (H5Pclose(dcpl) < 0) TEST_ERROR; /* close the destination dataset creation property list */ if (H5Pclose(dcpl2) < 0) TEST_ERROR; /* Check the allocated storage is the same */ /* Check that the space allocation status is the same */ if (H5Dget_space_status(did, &space_status) < 0) TEST_ERROR; if (H5Dget_space_status(did2, &space_status2) < 0) TEST_ERROR; if (space_status != space_status2) TEST_ERROR; /* Check that the space used is the same */ /* (Don't check if the dataset is filtered (i.e. compressed, etc.) and * the datatype is VLEN, since the tokens for the vlen * data in each dataset will (probably) be different and the storage * size will thus vary) */ if (!(nfilters > 0 && (H5Tdetect_class(tid, H5T_VLEN) || (H5Tdetect_class(tid, H5T_REFERENCE) && H5Tequal(tid, H5T_STD_REF_DSETREG))))) { hsize_t storage_size = H5Dget_storage_size(did); /* Dataset's raw data storage size */ hsize_t storage_size2 = H5Dget_storage_size(did2); /* 2nd Dataset's raw data storage size */ if (storage_size != storage_size2) TEST_ERROR; } /* end if */ /* Check the raw data is equal */ /* Allocate & initialize space for the raw data buffers */ if ((rbuf = calloc(elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR; if ((rbuf2 = calloc(elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR; /* Read data from datasets */ if (H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf) < 0) TEST_ERROR; if (H5Dread(did2, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR; /* Check raw data read in against data written out */ if (wbuf) { if (!compare_data(did, (hid_t)0, pid, tid, (size_t)nelmts, wbuf, rbuf, did)) TEST_ERROR; if (!compare_data(did2, (hid_t)0, pid, tid2, (size_t)nelmts, wbuf, rbuf2, did2)) TEST_ERROR; } /* end if */ /* Don't have written data, just compare data between the two datasets */ else if (!compare_data(did, did2, pid, tid, (size_t)nelmts, rbuf, rbuf2, did)) TEST_ERROR; /* Reclaim vlen data, if necessary */ if (H5Tdetect_class(tid, H5T_VLEN) == true) if (H5Treclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR; if (H5Tdetect_class(tid2, H5T_VLEN) == true) if (H5Treclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR; /* Release raw data buffers */ free(rbuf); rbuf = NULL; free(rbuf2); rbuf2 = NULL; /* close the source dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the destination dataspace */ if (H5Sclose(sid2) < 0) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the destination datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; /* Check if the attributes are equal */ if (compare_std_attributes(did, did2, pid) != true) TEST_ERROR; /* Datasets should be the same. :-) */ return true; error: H5E_BEGIN_TRY { if (rbuf) free(rbuf); if (rbuf2) free(rbuf2); H5Pclose(dcpl2); H5Pclose(dcpl); H5Sclose(sid2); H5Sclose(sid); H5Tclose(tid2); H5Tclose(tid); } H5E_END_TRY return false; } /* end compare_datasets() */ /*------------------------------------------------------------------------- * Function: compare_groups * * Purpose: Compare two groups to check that they are "equal" * * Return: true if group are equal/false if they are different * *------------------------------------------------------------------------- */ static int compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags) { H5G_info_t ginfo; /* Group info struct */ H5G_info_t ginfo2; /* Group info struct */ hsize_t idx; /* Index over the objects in group */ unsigned cpy_flags; /* Object copy flags */ /* Retrieve the object copy flags from the property list, if it's non-DEFAULT */ if (pid != H5P_DEFAULT) { if (H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR; } /* end if */ else cpy_flags = 0; /* Check if both groups have the same # of objects */ if (H5Gget_info(gid, &ginfo) < 0) TEST_ERROR; if (H5Gget_info(gid2, &ginfo2) < 0) TEST_ERROR; if ((cpy_flags & H5O_COPY_SHALLOW_HIERARCHY_FLAG) && depth == 0) { if (ginfo2.nlinks != 0) TEST_ERROR; } /* end if */ else { if (ginfo.nlinks != ginfo2.nlinks) TEST_ERROR; } /* end if */ /* Check contents of groups */ if (ginfo2.nlinks > 0) { char objname[NAME_BUF_SIZE]; /* Name of object in group */ char objname2[NAME_BUF_SIZE]; /* Name of object in group */ H5L_info2_t linfo; /* Link information */ H5L_info2_t linfo2; /* Link information */ /* Loop over contents of groups */ for (idx = 0; idx < ginfo.nlinks; idx++) { /* Check name of objects */ if (H5Lget_name_by_idx(gid, ".", H5_INDEX_NAME, H5_ITER_INC, idx, objname, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Lget_name_by_idx(gid2, ".", H5_INDEX_NAME, H5_ITER_INC, idx, objname2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR; if (strcmp(objname, objname2) != 0) TEST_ERROR; /* Get link info */ if (H5Lget_info2(gid, objname, &linfo, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Lget_info2(gid2, objname2, &linfo2, H5P_DEFAULT) < 0) TEST_ERROR; if (linfo.type != linfo2.type) TEST_ERROR; /* Extra checks for "real" objects */ if (linfo.type == H5L_TYPE_HARD) { hid_t oid, oid2; /* IDs of objects within group */ H5O_info2_t oinfo, oinfo2; /* Data model object info */ H5O_native_info_t ninfo, ninfo2; /* Native file format object info */ /* Compare some pieces of the object info */ /* Get data model object info */ if (H5Oget_info_by_name3(gid, objname, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Oget_info_by_name3(gid2, objname2, &oinfo2, H5O_INFO_BASIC, H5P_DEFAULT) < 0) TEST_ERROR; /* Get native object info */ if (H5Oget_native_info_by_name(gid, objname, &ninfo, H5O_NATIVE_INFO_HDR, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Oget_native_info_by_name(gid2, objname2, &ninfo2, H5O_NATIVE_INFO_HDR, H5P_DEFAULT) < 0) TEST_ERROR; if (oinfo.type != oinfo2.type) TEST_ERROR; if (oinfo.rc != oinfo2.rc) TEST_ERROR; /* If NULL messages are preserved, the number of messages * should be the same in the destination. * Otherwise, it should simply be true that the number * of messages hasn't increased. */ if (H5O_COPY_PRESERVE_NULL_FLAG & copy_flags) { if (ninfo.hdr.nmesgs != ninfo2.hdr.nmesgs) ; else if (ninfo.hdr.nmesgs < ninfo2.hdr.nmesgs) TEST_ERROR; } /* Check for object already having been compared */ if (token_lookup(gid, &oinfo)) continue; else token_insert(&oinfo); /* Open objects */ if ((oid = H5Oopen(gid, objname, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; if ((oid2 = H5Oopen(gid2, objname2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Compare objects within group */ switch (oinfo.type) { case H5O_TYPE_GROUP: /* Compare groups */ if (compare_groups(oid, oid2, pid, depth - 1, copy_flags) != true) TEST_ERROR; break; case H5O_TYPE_DATASET: /* Compare datasets */ if (compare_datasets(oid, oid2, pid, NULL) != true) TEST_ERROR; break; case H5O_TYPE_NAMED_DATATYPE: /* Compare datatypes */ if (H5Tequal(oid, oid2) != true) TEST_ERROR; break; case H5O_TYPE_MAP: assert(0 && "maps not supported in native VOL connector"); /* clang complains about implicit fallthrough here and * our usual attributes and fall-through comments don't * quiet the compiler. */ H5_CLANG_DIAG_OFF("implicit-fallthrough") case H5O_TYPE_UNKNOWN: case H5O_TYPE_NTYPES: default: assert(0 && "Unknown type of object"); break; H5_CLANG_DIAG_ON("implicit-fallthrough") } /* end switch */ /* Close objects */ if (H5Oclose(oid) < 0) TEST_ERROR; if (H5Oclose(oid2) < 0) TEST_ERROR; } /* end if */ else { /* Check that both links are the same size */ if (linfo.u.val_size != linfo2.u.val_size) TEST_ERROR; /* Compare link values */ if (linfo.type == H5L_TYPE_SOFT || (linfo.type >= H5L_TYPE_UD_MIN && linfo.type <= H5L_TYPE_MAX)) { char linkval[NAME_BUF_SIZE]; /* Link value */ char linkval2[NAME_BUF_SIZE]; /* Link value */ /* Get link values */ assert(linfo.u.val_size <= NAME_BUF_SIZE); if (H5Lget_val(gid, objname, linkval, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Lget_val(gid2, objname2, linkval2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR; /* Compare link data */ if (memcmp(linkval, linkval2, linfo.u.val_size) != 0) TEST_ERROR; } /* end else-if */ else { assert(0 && "Unknown type of link"); } /* end else */ } /* end else */ } /* end for */ } /* end if */ /* Check if the attributes are equal */ if (compare_std_attributes(gid, gid2, pid) != true) TEST_ERROR; /* Groups should be the same. :-) */ return true; error: H5E_BEGIN_TRY { } H5E_END_TRY return false; } /* end compare_groups() */ /*------------------------------------------------------------------------- * Function: compare_idx_type * * Purpose: If using new format, the index array type should be NEW_TYPE * If not, the index array type should be OLD_TYPE * * Return: true if the index type retrieved for the dataset DID is * as expected * false if not * *------------------------------------------------------------------------- */ static int compare_idx_type(hid_t fapl, hid_t did, H5D_chunk_index_t new_type, H5D_chunk_index_t old_type) { H5D_chunk_index_t idx_type; /* Dataset chunk index type */ H5F_libver_t low; /* File format low bound */ /* Get the chunk index type */ if (H5D__layout_idx_type_test(did, &idx_type) < 0) FAIL_STACK_ERROR; /* Check if we are using the latest version of the format */ if (H5Pget_libver_bounds(fapl, &low, NULL) < 0) FAIL_STACK_ERROR; /* Verify index type */ if (low == H5F_LIBVER_LATEST) { if (idx_type != new_type) TEST_ERROR; } else if (idx_type != old_type) TEST_ERROR; return true; error: return false; } /* compare_idx_type() */ /*------------------------------------------------------------------------- * Function: test_copy_named_datatype * * Purpose: Create name datatype in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_named_datatype(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): named datatype"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datatype from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATATYPE_SIMPLE, fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the datatype for copy */ if ((tid = H5Topen2(fid_src, NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the copied datatype */ if ((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* close the destination datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(tid2); H5Tclose(tid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_named_datatype */ /*------------------------------------------------------------------------- * Function: test_copy_named_datatype_vl * * Purpose: Create name vlen datatype in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_named_datatype_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): named vlen datatype"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datatype from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATATYPE_VL, fid_dst, NAME_DATATYPE_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the datatype for copy */ if ((tid = H5Topen2(fid_src, NAME_DATATYPE_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the copied datatype */ if ((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* close the destination datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(tid2); H5Tclose(tid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_named_datatype_vl */ /*------------------------------------------------------------------------- * Function: test_copy_named_datatype_vl_vl * * Purpose: Create named vlen of vlen datatype in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_named_datatype_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): named nested vlen datatype"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create first vlen datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create second (nested) vlen datatype */ if ((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR; /* create named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_VL_VL, tid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the first datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the second datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datatype from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATATYPE_VL_VL, fid_dst, NAME_DATATYPE_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the datatype for copy */ if ((tid = H5Topen2(fid_src, NAME_DATATYPE_VL_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the copied datatype */ if ((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_VL_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* close the destination datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(tid2); H5Tclose(tid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_named_datatype_vl_vl */ /*------------------------------------------------------------------------- * Function: test_copy_named_datatype_attr_self * * Purpose: Create name datatype in SRC file, with an attribute that * uses that named datatype as its datatype, and copy it to * DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_named_datatype_attr_self(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ hid_t aid = H5I_INVALID_HID; /* Attribute ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hsize_t dims[2] = {3, 4}; /* Dataspace dimensions */ H5O_info2_t oinfo, oinfo2; /* Object info */ H5G_info_t ginfo; /* Group info */ bool same_type; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): named datatype with self-referential attribute"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataspace */ if ((sid = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR; /* create attribute */ if ((aid = H5Acreate2(tid, "attr_self", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach other attributes to the dataset */ if (test_copy_attach_attributes(tid, tid) < 0) TEST_ERROR; /* close the attribute */ if (H5Aclose(aid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datatype from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATATYPE_SIMPLE, fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the source datatype */ if ((tid = H5Topen2(fid_src, NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the copied datatype */ if ((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* open the destination attribute */ if ((aid = H5Aopen(tid2, "attr_self", H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination attribute's datatype */ if ((tid = H5Aget_type(aid)) < 0) TEST_ERROR; /* verify that the attribute's datatype is committed */ if (H5Tcommitted(tid) != true) TEST_ERROR; /* verify that the tokens of the datatypes are the same */ if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Oget_info3(tid2, &oinfo2, H5O_INFO_BASIC) < 0) TEST_ERROR; same_type = true; if (oinfo.fileno == oinfo2.fileno) { int token_cmp; if (H5Otoken_cmp(tid2, &oinfo.token, &oinfo2.token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) same_type = false; } else same_type = false; if (!same_type) FAIL_PUTS_ERROR("destination attribute does not use the same committed datatype"); /* Verify that there are only 2 links int he destination root group */ if (H5Gget_info(fid_dst, &ginfo) < 0) if (ginfo.nlinks != 2) FAIL_PUTS_ERROR("unexpected number of links in destination root group"); /* close the attribute */ if (H5Aclose(aid) < 0) TEST_ERROR; /* close the datatypes */ if (H5Tclose(tid2) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(tid2); H5Tclose(tid); H5Sclose(sid); H5Aclose(aid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_named_datatype_attr_self */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_simple * * Purpose: Create a simple dataset in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_simple(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ hsize_t dim2d[2]; /* Dataset dimensions */ int i, j; /* local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): simple dataset"); /* Initialize write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_simple */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_versionbounds * * Purpose: Verify copying dataset works as expected in various version * bound combination. * * Description: * Create a simple dataset in SRC file using default versions. * For each valid version bound combination, create a DST file, * and attempt to copy the SRC dataset to the DST file. * When copying fails, verify that the failure is a result of * the invalid bounds, that is, DST has lower bounds than SRC. * * Return: Success: 0 * Failure: 1 * *------------------------------------------------------------------------- */ static int test_copy_dataset_versionbounds(hid_t fcpl_src, hid_t fapl_src) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* Source and destination file IDs */ hid_t fapl_dst = H5I_INVALID_HID; /* File access plist for dest file */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did_src = H5I_INVALID_HID, did_dst = H5I_INVALID_HID; /* Source and destination dataset IDs */ int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ hsize_t dim2d[2]; /* Dataset dimensions */ char src_fname[NAME_BUF_SIZE]; /* Name of source file */ char dst_fname[NAME_BUF_SIZE]; /* Name of destination file */ H5F_libver_t low, high; /* File format bounds */ unsigned srcdset_layoutversion; /* Layout version of source dataset */ int i, j; /* Local index variables */ H5D_t *dsetp = NULL; /* Pointer to internal dset structure */ herr_t ret; /* Generic return value */ TESTING("H5Ocopy(): simple dataset with version bounds"); /* Initialize write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Create a file access property list for destination file */ if ((fapl_dst = h5_fileaccess()) < 0) TEST_ERROR; /* Initialize the filenames */ h5_fixname(FILENAME[4], fapl_src, src_fname, sizeof src_fname); h5_fixname(FILENAME[5], fapl_dst, dst_fname, sizeof dst_fname); /* Reset file token checking info */ token_reset(); /* Create source file */ fid_src = H5Fcreate(src_fname, H5F_ACC_TRUNC, fcpl_src, fapl_src); if (fid_src < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* Create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* Create 2D int dataset in SRC file */ did_src = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (did_src < 0) TEST_ERROR; /* Write data into SRC file */ ret = H5Dwrite(did_src, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); if (ret < 0) TEST_ERROR; /* Get the internal dset ptr to get the fill version for verifying later */ if ((dsetp = (H5D_t *)H5VL_object(did_src)) == NULL) TEST_ERROR; srcdset_layoutversion = dsetp->shared->layout.version; /* Close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* Close the dataset */ if (H5Dclose(did_src) < 0) TEST_ERROR; /* Close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* Open the source file with read-only */ fid_src = H5Fopen(src_fname, H5F_ACC_RDONLY, fapl_src); if (fid_src < 0) TEST_ERROR; /* Loop through all the combinations of low/high library format bounds, skipping invalid combinations. Create a destination file and copy the source dataset to it, then verify */ for (low = H5F_LIBVER_EARLIEST; low < H5F_LIBVER_NBOUNDS; low++) { for (high = H5F_LIBVER_EARLIEST; high < H5F_LIBVER_NBOUNDS; high++) { /* Set version bounds */ H5E_BEGIN_TRY { ret = H5Pset_libver_bounds(fapl_dst, low, high); } H5E_END_TRY if (ret < 0) /* Invalid low/high combinations */ continue; /* Create destination file */ fid_dst = H5Fcreate(dst_fname, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_dst); if (fid_dst < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Try to copy the dataset */ H5E_BEGIN_TRY { ret = H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT); } H5E_END_TRY /* If copy failed, check if the failure is expected */ if (ret < 0) { /* Failure is valid if layout version of source dataset is greater than destination */ if (srcdset_layoutversion <= H5O_layout_ver_bounds[high]) TEST_ERROR; /* Close the DST file before continue */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; continue; } /* Close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Open destination file */ fid_dst = H5Fopen(dst_fname, H5F_ACC_RDWR, fapl_dst); if (fid_dst < 0) TEST_ERROR; /* Open the datasets to compare */ did_src = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT); if (did_src < 0) TEST_ERROR; did_dst = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT); if (did_dst < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did_src, did_dst, H5P_DEFAULT, buf) != true) TEST_ERROR; /* Close the datasets */ if (H5Dclose(did_dst) < 0) TEST_ERROR; if (H5Dclose(did_src) < 0) TEST_ERROR; /* Close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; } /* for high */ } /* for low */ /* Close property list and source file */ if (H5Pclose(fapl_dst) < 0) TEST_ERROR; if (H5Fclose(fid_src) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did_dst); H5Dclose(did_src); H5Sclose(sid); H5Pclose(fapl_dst); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_versionbounds */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_simple_samefile * * Purpose: Create a simple dataset in SRC file and copy it to SRC file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_simple_samefile(hid_t fcpl, hid_t fapl) { hid_t fid = H5I_INVALID_HID; /* File ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ hsize_t dim2d[2]; /* Dataset dimensions */ int i, j; /* local index variables */ char filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): simple dataset within the same file"); /* Initialize write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], fapl, filename, sizeof filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid) < 0) TEST_ERROR; /* open the source file with read-write */ if ((fid = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid, NAME_DATASET_SIMPLE, fid, NAME_DATASET_SIMPLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid, NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Sclose(sid); H5Fclose(fid); } H5E_END_TRY return 1; } /* end test_copy_dataset_simple_samefile */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_simple_empty * * Purpose: Create a simple dataset in SRC file and copy it to DST file * (Note: dataset has no data) * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_simple_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim2d[2]; /* Dataset dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): empty and opened contiguous dataset"); } else { TESTING("H5Ocopy(): empty contiguous dataset"); } /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_simple_empty */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compound * * Purpose: Create a compound dataset in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compound(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim1d[1]; /* Dataset dimensions */ typedef struct comp_t { int a; double d; } comp_t; comp_t buf[DIM_SIZE_1]; /* Buffer for writing data */ int i; /* Local index variable */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): compound dataset"); memset(buf, 0, sizeof(buf)); for (i = 0; i < DIM_SIZE_1; i++) { buf[i].a = i; buf[i].d = 1.0 / (double)(i + 1); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcreate(H5T_COMPOUND, sizeof(comp_t))) < 0) TEST_ERROR; if (H5Tinsert(tid, "int_name", HOFFSET(comp_t, a), H5T_NATIVE_INT) < 0) TEST_ERROR; if (H5Tinsert(tid, "double_name", HOFFSET(comp_t, d), H5T_NATIVE_DOUBLE) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_COMPOUND, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_COMPOUND, fid_dst, NAME_DATASET_COMPOUND, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_COMPOUND, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_COMPOUND, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compound */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked * * Purpose: Create a chunked dataset in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim1d[1]; /* Dataset dimensions */ hsize_t max_dim1d[1]; /* Dataset max. dimensions */ hsize_t dim2d[2]; /* Dataset dimensions */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */ float buf1d[DIM_SIZE_1]; /* Buffer for writing data */ float buf2d[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int i, j; /* Local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): chunked dataset"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf1d[i] = (float)i / 2.0F; for (j = 0; j < DIM_SIZE_2; j++) buf2d[i][j] = (float)i + ((float)j / 100.0F); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set 1-D dataspace dimensions */ dim1d[0] = DIM_SIZE_1; max_dim1d[0] = H5S_UNLIMITED; /* create 1-D dataspace */ if ((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * Create 1-D dataset: chunked, non-filterd, with data * dims=max dims=chunk dims * H5D_ALLOC_TIME_INC (default) */ /* create 1-D dataspace */ if ((sid = H5Screate_simple(1, dim1d, dim1d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, dim1d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set 2-D dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED3, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * Create 2-D dataset: chunked, non-filterd, with data, dims=chunk dims, * H5D_ALLOC_TIME_INC (default) */ /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set chunk plist to be the same as dims2d */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, dim2d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * Create 2-D dataset: chunked, non-filterd, with data, dims=chunk dims, * H5D_ALLOC_TIME_EARLY */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED3_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* * Create 2-D dataset: chunked, non-filterd, with data, dims=max dims=chunk dims, * H5D_ALLOC_TIME_LATE */ /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, dim2d)) < 0) TEST_ERROR; /* create and set chunk plist to be the same as dims2d */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, dim2d) < 0) TEST_ERROR; if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_LATE) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED4_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datasets from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED3, fid_dst, NAME_DATASET_CHUNKED3, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED_SINGLE, fid_dst, NAME_DATASET_CHUNKED_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2_SINGLE, fid_dst, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED3_SINGLE, fid_dst, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED4_SINGLE, fid_dst, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the 1-D destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_EARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf1d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the 1-D destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf1d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the 2-D dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf2d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the 2-D dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED3, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED3, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_NONE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf2d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the 2-D dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf2d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the 2-D dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf2d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the 2-D dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf2d) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked_empty * * Purpose: Create a chunked dataset in SRC file and copy it to DST file * (Note: dataset has no data) * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim1d[1]; /* Dataset dimensions */ hsize_t max_dim1d[1]; /* Dataset max. dimensions */ hsize_t dim2d[2]; /* Dataset dimensions */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): empty chunked dataset"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set 1-D dataspace dimensions */ dim1d[0] = DIM_SIZE_1; max_dim1d[0] = H5S_UNLIMITED; /* create 1-D dataspace */ if ((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 1-D dataset: chunked, empty, non-filtered, * dims=max dims=chunk dims, H5D_ALLOC_TIME_INC(default) */ /* Set 1-D dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create 1-D dataspace */ if ((sid = H5Screate_simple(1, dim1d, dim1d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, dim1d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set 2-D dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED3, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 2-D dataset: chunked, empty, non-filtered, * dims=chunk dims, H5D_ALLOC_TIME_INC (default) */ /* Set 2-D dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, dim2d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 2-D dataset: chunked, empty, non-filtered, dims=chunk dims * H5D_ALLOC_TIME_EARLY */ /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED3_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 2-D dataset: chunked, empty, non-filtered, * dims=max dims=chunk dims, H5D_ALLOC_TIME_LATE */ /* Set 2-D dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, dim2d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, dim2d) < 0) TEST_ERROR; /* Set allocation time to late */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_LATE) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED4_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datasets from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED_SINGLE, fid_dst, NAME_DATASET_CHUNKED_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2_SINGLE, fid_dst, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED3, fid_dst, NAME_DATASET_CHUNKED3, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED3_SINGLE, fid_dst, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED4_SINGLE, fid_dst, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_EARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED_SINGLE in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED2 in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED2 at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset "NAME_DATASET_CHUNKED2_SINGLE in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED2_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED3 in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED3, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED3 at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED3, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_NONE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED3_SINGLE in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED3_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED4_SINGLE in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED4_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked_empty */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked_sparse * * Purpose: Create a chunked dataset with unlimited dimensions and un-written * chunks in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked_sparse(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim1d[1]; /* Dataset dimensions */ hsize_t new_dim1d[1]; /* Dataset dimensions */ hsize_t max_dim1d[1]; /* Dataset max. dimensions */ hsize_t dim2d[2]; /* Dataset dimensions */ hsize_t new_dim2d[2]; /* Dataset dimensions */ hsize_t max_dim2d[2]; /* Dataset max. dimensions */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */ float buf1d[DIM_SIZE_1]; /* Buffer for writing data */ float buf2d[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int i, j; /* Local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): sparse dataset"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf1d[i] = (float)i / 10.0F; for (j = 0; j < DIM_SIZE_2; j++) buf2d[i][j] = (float)i + ((float)j / 100.0F); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set 1-D dataspace dimensions */ dim1d[0] = DIM_SIZE_1; max_dim1d[0] = H5S_UNLIMITED; /* create 1-D dataspace */ if ((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* Set extended dataset dimensions */ new_dim1d[0] = DIM_SIZE_1 * 2; /* Extend dataset's dimensions */ if (H5Dset_extent(did, new_dim1d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Change 1-D dataspace dimensions */ dim1d[0] = DIM_SIZE_1; max_dim1d[0] = MAX_DIM_SIZE_1; /* create 1-D dataspace */ if ((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED3, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* Set extended dataset dimensions */ new_dim1d[0] = DIM_SIZE_1 * 2; /* Extend dataset's dimensions */ if (H5Dset_extent(did, new_dim1d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set 2-D dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; max_dim2d[0] = H5S_UNLIMITED; max_dim2d[1] = H5S_UNLIMITED; /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, max_dim2d)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* Set extended dataset dimensions */ new_dim2d[0] = DIM_SIZE_1 * 2; new_dim2d[1] = DIM_SIZE_2 * 2; /* Extend dataset's dimensions */ if (H5Dset_extent(did, new_dim2d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Change 2-D dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; max_dim2d[0] = MAX_DIM_SIZE_1; max_dim2d[1] = MAX_DIM_SIZE_2; /* create 2-D dataspace */ if ((sid = H5Screate_simple(2, dim2d, max_dim2d)) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED4, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* Set extended dataset dimensions */ new_dim2d[0] = DIM_SIZE_1 * 2; new_dim2d[1] = DIM_SIZE_2 * 2; /* Extend dataset's dimensions */ if (H5Dset_extent(did, new_dim2d) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datasets from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED3, fid_dst, NAME_DATASET_CHUNKED3, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED4, fid_dst, NAME_DATASET_CHUNKED4, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_EARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_BT2, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED3, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED3, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_NONE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED4, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED4, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the array index type is correct */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_NONE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked_sparse */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compressed * * Purpose: Create a compressed, chunked dataset in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compressed(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { #ifdef H5_HAVE_FILTER_DEFLATE hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim2d[2]; /* Dataset dimensions */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */ float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int i, j; /* Local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; #endif /* H5_HAVE_FILTER_DEFLATE */ TESTING("H5Ocopy(): compressed dataset"); #ifndef H5_HAVE_FILTER_DEFLATE (void)fcpl_src; (void)fcpl_dst; (void)src_fapl; (void)dst_fapl; /* Silence compiler */ SKIPPED(); puts(" Deflation filter not available"); #else /* H5_HAVE_FILTER_DEFLATE */ /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 100.0F; /* Something easy to compress */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set comp & chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 2-D dataset: chunked, filtered, with data * dims=max dims=chunk dims, H5D_ALLOC_TIME_INC(default) */ /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, dim2d)) < 0) TEST_ERROR; /* create and set comp & chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, dim2d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 2-D dataset: chunked, filtered, with data * dims=chunk dims, H5D_ALLOC_TIME_EARLY */ /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED3_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* * create 2-D dataset: chunked, filtered, with data * dims=chunk dims, H5D_ALLOC_TIME_LATE */ /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set comp & chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, dim2d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; /* Set allocation time to late */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_LATE) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED4_SINGLE, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED2_SINGLE, fid_dst, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED3_SINGLE, fid_dst, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED4_SINGLE, fid_dst, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Fclose(fid_dst) < 0) TEST_ERROR; if (H5Fclose(fid_src) < 0) TEST_ERROR; /* Re-open the source and destination files for verification */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED2_SINGLE at source */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED2_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED3_SINGLE at source */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED3_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED3_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset NAME_DATASET_CHUNKED4_SINGLE at source */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the copied dataset NAME_DATASET_CHUNKED4_SINGLE at destination */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED4_SINGLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_SINGLE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); #endif /* H5_HAVE_FILTER_DEFLATE */ return 0; #ifdef H5_HAVE_FILTER_DEFLATE error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; #endif /* H5_HAVE_FILTER_DEFLATE */ } /* end test_copy_dataset_compressed */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_no_edge_filt * * Purpose: Create a compressed, chunked dataset in SRC file and copy it to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_no_edge_filt(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { #ifdef H5_HAVE_FILTER_DEFLATE hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim2d[2]; /* Dataset dimensions */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */ float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int i, j; /* Local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; #endif /* H5_HAVE_FILTER_DEFLATE */ if (test_open) { TESTING("H5Ocopy(): compressed and opened dataset with no edge filters"); } else { TESTING("H5Ocopy(): compressed dataset with no edge filters"); } #ifndef H5_HAVE_FILTER_DEFLATE (void)fcpl_src; (void)fcpl_dst; (void)src_fapl; (void)dst_fapl; /* Silence compiler */ SKIPPED(); puts(" Deflation filter not available"); #else /* H5_HAVE_FILTER_DEFLATE */ /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 100.0F; /* Something easy to compress */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set comp & chunk plist, and disable partial chunk filters */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; if (H5Pset_chunk_opts(pid, H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* H5Pset_chunk_opts() will set layout version to 4 which will use latest indexing available */ if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_FARRAY) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); #endif /* H5_HAVE_FILTER_DEFLATE */ return 0; #ifdef H5_HAVE_FILTER_DEFLATE error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; #endif /* H5_HAVE_FILTER_DEFLATE */ } /* end test_copy_dataset_no_edge_filt */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compact * * Purpose: Create a compact dataset in SRC file and copy it to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compact(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim2d[2]; /* Dataset dimensions */ float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int i, j; /* Local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): compact and opened dataset"); } else { TESTING("H5Ocopy(): compact dataset"); } /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = (float)i + (float)j / 100.0F; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_COMPACT, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_COMPACT, fid_dst, NAME_DATASET_COMPACT, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_COMPACT, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_COMPACT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compact */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_external * * Purpose: Create an external dataset in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_external(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ int i; hsize_t size; hsize_t dim1d[1]; int buf[DIM_SIZE_1]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): external dataset"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* create an empty external file */ fclose(fopen(FILE_EXT, "w")); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* set dataset creation plist */ size = DIM_SIZE_1 * sizeof(int); if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_external(pid, FILE_EXT, (off_t)0, size) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_EXTERNAL, H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close external plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_EXTERNAL, fid_dst, NAME_DATASET_EXTERNAL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_EXTERNAL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_EXTERNAL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_external */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_named_dtype * * Purpose: Create a dataset that uses a named datatype in SRC file and * copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_named_dtype(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ int i; hsize_t dim1d[1]; int buf[DIM_SIZE_1]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): dataset that uses named datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create named datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_NAMED_DTYPE, fid_dst, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_named_dtype */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_named_dtype_hier * * Purpose: Create a hierarchy of datasets that use a named datatype in * SRC file and copy hierarchy to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_named_dtype_hier(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ int i; hsize_t dim1d[1]; int buf[DIM_SIZE_1]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): hier. of datasets using named datatype inside hier."); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create group to place all objects in */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create named datatype _inside_ hierarchy to copy */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create first dataset at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* create second dataset at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did); H5Tclose(tid); H5Sclose(sid); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_named_dtype_hier */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_named_dtype_hier_outside * * Purpose: Create a hierarchy of datasets that use a named datatype that * is outside of hierarchy in SRC file and copy hierarchy to DST * file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_named_dtype_hier_outside(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ int i; hsize_t dim1d[1]; int buf[DIM_SIZE_1]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): hier. of datasets using named datatype outside hier."); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create group to place all objects in */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create named datatype _outside_ hierarchy to copy */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create first dataset at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* create second dataset at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did); H5Tclose(tid); H5Sclose(sid); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_named_dtype_hier_outside */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_multi_ohdr_chunks * * Purpose: Create a pair of datasets that add attributes in a way that * creates lots of object header chunks in SRC file and copy * datasets to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_multi_ohdr_chunks(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ int i; hsize_t dim1d[1]; int buf[DIM_SIZE_1]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): opened datasets that have multiple ohdr chunks"); } else { TESTING("H5Ocopy(): datasets that have multiple ohdr chunks"); } /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create group to place all objects in */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create first dataset at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* create second dataset at SRC file */ if ((did2 = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* Add attributes to datasets in a way that creates lots of chunks */ if (test_copy_attach_paired_attributes(did, did2, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the first dataset */ if (H5Dclose(did) < 0) TEST_ERROR; if (!test_open) { /* close the second dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (test_open) { /* close the second dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; } else /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Sclose(sid); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_multi_ohdr_chunks */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_attr_named_dtype * * Purpose: Create a pair of datasets that add attributes that use * named datatypes in SRC file and copy datasets to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_attr_named_dtype(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ int i; hsize_t dim1d[1]; int buf[DIM_SIZE_1]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): objects with attributes using named datatypes"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create group to place all objects in */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create named datatype _outside_ hierarchy to copy */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create first dataset at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* create second dataset at SRC file */ if ((did2 = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* Add attributes to datasets in a way that creates lots of chunks */ if (test_copy_attach_paired_attributes(did, did2, tid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the first dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the second dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Tclose(tid); H5Sclose(sid); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_attr_named_dtype */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_contig_vl * * Purpose: Create a contiguous dataset w/VLEN datatype in SRC * file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_contig_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): contiguous dataset with VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_contig_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked_vl * * Purpose: Create a chunked dataset w/VLEN datatype in SRC * file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): chunked dataset with VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL2, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_VL2, fid_dst, NAME_DATASET_VL2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL2, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL2, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_NONE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Pclose(pid); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compact_vl * * Purpose: Create a compact dataset w/VLEN datatype in SRC * file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compact_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): compact dataset with VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compact_vl */ /*------------------------------------------------------------------------- * Function: test_copy_attribute_vl * * Purpose: Create a simple dataset with vlen attributes in SRC file * and copy it to DST file (Note: dataset has no data) * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_attribute_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t aid = H5I_INVALID_HID, aid2 = H5I_INVALID_HID; /* Attribute IDs */ hsize_t dim2d[2]; /* Dataset dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): variable length attribute"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach VL attribute to the dataset */ if (test_copy_attach_attribute_vl(did) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the attributes are equal */ if ((aid = H5Aopen_by_idx(did, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)0, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((aid2 = H5Aopen_by_idx(did2, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)0, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_attribute(aid, aid2, H5P_DEFAULT, NULL, did) != true) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Aclose(aid2) < 0) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Aclose(aid2); H5Aclose(aid); H5Dclose(did2); H5Dclose(did); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_simple_empty */ /*------------------------------------------------------------------------- * Function: attach_attribute_compound_vlstr * * Purpose: Attach a compound datatype with a variable length string to the object * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static int attach_attribute_compound_vlstr(hid_t loc_id) { hid_t aid = H5I_INVALID_HID; /* Attribute ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t vl_str_tid = H5I_INVALID_HID; /* Variable length string datatype ID */ hid_t cmpd_tid = H5I_INVALID_HID; /* Compound datatype ID */ hsize_t dim1 = 1; /* Dimension size */ typedef struct { /* Compound structure for the attribute */ int i; char *v; } s1; size_t len; s1 buf = {0, NULL}; /* Buffer */ int ret_value = -1; /* Return value */ /* Create dataspace */ if ((sid = H5Screate_simple(1, &dim1, NULL)) < 0) goto done; /* Create an integer datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) goto done; /* Create a variable length string */ if ((vl_str_tid = H5Tcopy(H5T_C_S1)) < 0) goto done; if (H5Tset_size(vl_str_tid, H5T_VARIABLE) < 0) goto done; /* Create a compound datatype with a variable length string and an integer */ if ((cmpd_tid = H5Tcreate(H5T_COMPOUND, sizeof(s1))) < 0) goto done; if (H5Tinsert(cmpd_tid, "i", HOFFSET(s1, i), tid) < 0) goto done; if (H5Tinsert(cmpd_tid, "v", HOFFSET(s1, v), vl_str_tid) < 0) goto done; /* Attach an attribute to the object */ if ((aid = H5Acreate2(loc_id, "attr_cmpd_vlstr", cmpd_tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto done; /* Write to the attribute */ len = strlen(ATTR_CMPD_STRING) + 1; buf.i = 9; if (NULL == (buf.v = (char *)calloc(len, sizeof(char)))) goto done; strncpy(buf.v, ATTR_CMPD_STRING, len); if (H5Awrite(aid, cmpd_tid, &buf) < 0) goto done; ret_value = 0; done: if (sid > 0) H5Sclose(sid); if (tid > 0) H5Tclose(tid); if (vl_str_tid > 0) H5Tclose(vl_str_tid); if (cmpd_tid > 0) H5Tclose(cmpd_tid); if (aid > 0) H5Aclose(aid); free(buf.v); return ret_value; } /* attach_attribute_compound_vlstr */ /*------------------------------------------------------------------------- * Function: compare_attribute_compound_vlstr * * Purpose: Compare data of the attributes attached to the two objects. * The attribute is a compound datatype with a variable length string. * * Return: Non-negative on success/Negative on failure * *------------------------------------------------------------------------- */ static int compare_attribute_compound_vlstr(hid_t loc, hid_t loc2) { hid_t aid = H5I_INVALID_HID, aid2 = H5I_INVALID_HID; /* Attribute IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ hid_t sid = H5I_INVALID_HID, sid2 = H5I_INVALID_HID; /* Dataspace IDs */ hid_t dxpl_id = H5I_INVALID_HID; typedef struct { /* Compound structure for the attribute */ int i; char *v; } s1; s1 rbuf; /* Buffer for data read */ s1 rbuf2; /* Buffer for data read */ /* Open the attributes attached to the objects */ if ((aid = H5Aopen_by_idx(loc, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)0, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; if ((aid2 = H5Aopen_by_idx(loc2, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)0, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Get the attributes' datatypes */ if ((tid = H5Aget_type(aid)) < 0) FAIL_STACK_ERROR; if ((tid2 = H5Aget_type(aid2)) < 0) FAIL_STACK_ERROR; /* Get the attributes' dataspaces */ if ((sid = H5Aget_space(aid)) < 0) FAIL_STACK_ERROR; if ((sid2 = H5Aget_space(aid2)) < 0) FAIL_STACK_ERROR; /* Read the attributes */ if (H5Aread(aid, tid, &rbuf) < 0) FAIL_STACK_ERROR; if (H5Aread(aid2, tid2, &rbuf2) < 0) FAIL_STACK_ERROR; /* Compare the attributes' data */ if (rbuf.i != rbuf2.i) FAIL_STACK_ERROR; if (strlen(rbuf.v) != strlen(rbuf2.v)) FAIL_STACK_ERROR; if (memcmp(rbuf.v, rbuf2.v, strlen(rbuf.v)) != 0) FAIL_STACK_ERROR; /* Reclaim vlen buffer */ if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, &rbuf) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, &rbuf2) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; /* Close the dataspaces */ if (H5Sclose(sid) < 0) FAIL_STACK_ERROR; if (H5Sclose(sid2) < 0) FAIL_STACK_ERROR; /* Close the attributes */ if (H5Aclose(aid) < 0) FAIL_STACK_ERROR; if (H5Aclose(aid2) < 0) FAIL_STACK_ERROR; return true; error: H5E_BEGIN_TRY { H5Aclose(aid); H5Aclose(aid2); H5Treclaim(tid, sid, H5P_DEFAULT, &rbuf); H5Treclaim(tid, sid, H5P_DEFAULT, &rbuf2); H5Sclose(sid); H5Sclose(sid2); H5Tclose(tid); H5Tclose(tid2); H5Pclose(dxpl_id); } H5E_END_TRY return false; } /* compare_attribute_compound_vlstr() */ /*------------------------------------------------------------------------- * Function: test_copy_attribute_compound_vlstr * * Purpose: Create a simple dataset and a group in SRC file. * Both has an attribute with a compound datatype consisting * of a variable length string * Copy the dataset and the group to DST file * This is for HDFFV-7991 * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_attribute_compound_vlstr(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t aid = H5I_INVALID_HID, aid2 = H5I_INVALID_HID; /* Attribute IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hsize_t dim2d[2]; /* Dataset dimensions */ char src_filename[NAME_BUF_SIZE]; /* Source file name */ char dst_filename[NAME_BUF_SIZE]; /* Destination file name */ TESTING("H5Ocopy(): attribute with compound datatype consisting of variable length string"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) FAIL_STACK_ERROR; /* set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) FAIL_STACK_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) FAIL_STACK_ERROR; /* attach an attribute to the dataset */ if (attach_attribute_compound_vlstr(did) < 0) FAIL_STACK_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) FAIL_STACK_ERROR; /* create a group */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* attach attribute to the group */ if (attach_attribute_compound_vlstr(gid) < 0) FAIL_STACK_ERROR; /* close the group */ if (H5Gclose(gid) < 0) FAIL_STACK_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) FAIL_STACK_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) FAIL_STACK_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) FAIL_STACK_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* open the src dataset */ if ((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* compare the data of the attributes attached to the two datasets */ if (compare_attribute_compound_vlstr(did, did2) < 0) FAIL_STACK_ERROR; /* close the datasets */ if (H5Dclose(did2) < 0) FAIL_STACK_ERROR; if (H5Dclose(did) < 0) FAIL_STACK_ERROR; /* Copy the group */ if (H5Ocopy(fid_src, NAME_GROUP_EMPTY, fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* Open the src group */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_EMPTY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* compare the data of the attributes attached to the two groups */ if (compare_attribute_compound_vlstr(gid, gid2) < 0) FAIL_STACK_ERROR; /* close the groups */ if (H5Gclose(gid) < 0) FAIL_STACK_ERROR; if (H5Gclose(gid2) < 0) FAIL_STACK_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) FAIL_STACK_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) FAIL_STACK_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Aclose(aid2); H5Aclose(aid); H5Dclose(did2); H5Dclose(did); H5Gclose(gid); H5Gclose(gid2); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_attribute_compound_vlstr() */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compressed_vl * * Purpose: Create a compressed, chunked, VLEN dataset in SRC * file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compressed_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { #ifdef H5_HAVE_FILTER_DEFLATE hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ hsize_t dim2d[2]; /* Dataset dimensions */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */ hvl_t buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int i, j, k; /* Local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; #endif /* H5_HAVE_FILTER_DEFLATE */ TESTING("H5Ocopy(): compressed dataset with VLEN datatype"); #ifndef H5_HAVE_FILTER_DEFLATE (void)fcpl_src; (void)fcpl_dst; (void)src_fapl; (void)dst_fapl; /* Silence compiler */ SKIPPED(); puts(" Deflation filter not available"); #else /* H5_HAVE_FILTER_DEFLATE */ /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { for (j = 0; j < DIM_SIZE_2; j++) { buf[i][j].len = (size_t)(j + 1); buf[i][j].p = (int *)malloc(buf[i][j].len * sizeof(int)); for (k = 0; k < (int)buf[i][j].len; k++) ((int *)buf[i][j].p)[k] = i * 10000 + j * 100 + k; } } /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create and set comp & chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); #endif /* H5_HAVE_FILTER_DEFLATE */ return 0; #ifdef H5_HAVE_FILTER_DEFLATE error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Pclose(pid); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; #endif /* H5_HAVE_FILTER_DEFLATE */ } /* end test_copy_dataset_compressed_vl */ /*------------------------------------------------------------------------- * Function: test_copy_group_empty * * Purpose: Create an empty group in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_group_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): empty group"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_EMPTY, fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_EMPTY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_group_empty */ /*------------------------------------------------------------------------- * Function: test_copy_root_group * * Purpose: Create a root group in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_root_group(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t gid_sub = H5I_INVALID_HID; /* Sub-group ID */ hsize_t dim2d[2]; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): root group"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* add a dataset to the group */ if ((did = H5Dcreate2(fid_src, NAME_GROUP_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* create a sub-group */ if ((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid_sub) < 0) TEST_ERROR; /* create another sub-group */ if ((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB_2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid_sub) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, "/", fid_dst, "/root_from_src", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, "/", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, "/root_from_src", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Dclose(did); H5Gclose(gid_sub); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_root_group */ /*------------------------------------------------------------------------- * Function: test_copy_group * * Purpose: Create a group in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_group(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t gid_sub = H5I_INVALID_HID; /* Sub-group ID */ hsize_t dim2d[2]; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): simple nested groups"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* add a dataset to the group */ if ((did = H5Dcreate2(fid_src, NAME_GROUP_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* create a sub-group */ if ((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid_sub) < 0) TEST_ERROR; /* create another sub-group */ if ((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB_2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid_sub) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Dclose(did); H5Gclose(gid_sub); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_group */ /*------------------------------------------------------------------------- * Function: test_copy_group_deep * * Purpose: Create a deep group hier. in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_group_deep(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t gid_sub = H5I_INVALID_HID, gid_sub2; /* Sub-group IDs */ hsize_t dim2d[2]; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j, k; /* Local index variables */ char objname[NAME_BUF_SIZE]; /* Sub-group & dataset name buffer */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): deep nested groups"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create nested sub-groups & datasets */ for (i = 0; i < NUM_SUB_GROUPS; i++) { snprintf(objname, sizeof(objname), "Group #%d", i); if ((gid_sub = H5Gcreate2(gid, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; for (j = 0; j < NUM_SUB_GROUPS; j++) { snprintf(objname, sizeof(objname), "Group #%d", j); if ((gid_sub2 = H5Gcreate2(gid_sub, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; for (k = 0; k < NUM_DATASETS; k++) { snprintf(objname, sizeof(objname), "Dataset #%d", k); /* add a dataset to the group */ if ((did = H5Dcreate2(gid_sub2, objname, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; } /* end for */ if (H5Gclose(gid_sub2) < 0) TEST_ERROR; } /* end for */ if (H5Gclose(gid_sub) < 0) TEST_ERROR; } /* end for */ /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Dclose(did); H5Gclose(gid_sub); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_group_deep */ /*------------------------------------------------------------------------- * Function: test_copy_group_loop * * Purpose: Create a group hier. with loops in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_group_loop(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t gid_sub = H5I_INVALID_HID, gid_sub2 = H5I_INVALID_HID; /* Sub-group IDs */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): nested groups with loop"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* create sub-groups */ if ((gid_sub = H5Gcreate2(gid, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((gid_sub2 = H5Gcreate2(gid, NAME_GROUP_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create link to top group */ if (H5Lcreate_hard(gid, ".", gid_sub2, NAME_GROUP_LOOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* close sub sub group */ if (H5Gclose(gid_sub2) < 0) TEST_ERROR; /* close sub group */ if (H5Gclose(gid_sub) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Gclose(gid_sub2); H5Gclose(gid_sub); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_group_loop */ /*------------------------------------------------------------------------- * Function: test_copy_group_wide_loop * * Purpose: Create a group hier. with loops in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * * Note: Create groups w/lots of entries in each level, so that "dense" * group form is used. * * Note: Also tests multiple links to a locked group during copy. * *------------------------------------------------------------------------- */ static int test_copy_group_wide_loop(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t gid_sub = H5I_INVALID_HID, gid_sub2 = H5I_INVALID_HID; /* Sub-group IDs */ unsigned u, v; /* Local index variables */ char objname[NAME_BUF_SIZE]; /* Object name buffer */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): wide nested groups with loop"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* create wide sub-group hierarchy, with multiple links to higher groups */ for (u = 0; u < NUM_WIDE_LOOP_GROUPS; u++) { snprintf(objname, sizeof(objname), "%s-%u", NAME_GROUP_SUB, u); if ((gid_sub = H5Gcreate2(gid, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; for (v = 0; v < NUM_WIDE_LOOP_GROUPS; v++) { snprintf(objname, sizeof(objname), "%s-%u", NAME_GROUP_SUB_SUB2, v); if ((gid_sub2 = H5Gcreate2(gid_sub, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Create link to top group */ if (H5Lcreate_hard(gid, ".", gid_sub2, NAME_GROUP_LOOP, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* Create link to sub-group */ if (H5Lcreate_hard(gid_sub, ".", gid_sub2, NAME_GROUP_LOOP2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* Create link to self :-) */ if (H5Lcreate_hard(gid_sub2, ".", gid_sub2, NAME_GROUP_LOOP3, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* close sub sub group */ if (H5Gclose(gid_sub2) < 0) FAIL_STACK_ERROR; } /* end for */ /* close sub group */ if (H5Gclose(gid_sub) < 0) TEST_ERROR; } /* end for */ /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Gclose(gid_sub2); H5Gclose(gid_sub); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_group_wide_loop */ /*------------------------------------------------------------------------- * Function: test_copy_group_links * * Purpose: Create a group and links in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_group_links(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID, fid_ext = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t plid = H5I_INVALID_HID; /* Object copy plist ID */ hsize_t dim2d[2]; hsize_t dim1d[1]; H5L_info2_t linfo; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j; unsigned expand_soft; unsigned expand_ext; unsigned copy_options; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; char ext_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): group with links"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], src_fapl, dst_filename, sizeof dst_filename); h5_fixname(FILENAME[2], dst_fapl, ext_filename, sizeof ext_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create file to hold external dataset */ if ((fid_ext = H5Fcreate(ext_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create groups at the SRC file. Group 2 will hold dangling links. */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((gid2 = H5Gcreate2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the groups */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; if (test_copy_attach_attributes(gid2, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* add a dataset to the group */ if ((did = H5Dcreate2(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Now create a 1-D dataset in an external file */ /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* add a dataset to the external file */ if ((did = H5Dcreate2(fid_ext, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* make a hard link to the dataset */ if (H5Lcreate_hard(fid_src, NAME_LINK_DATASET, H5L_SAME_LOC, NAME_LINK_HARD, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* make a soft link to the dataset */ if (H5Lcreate_soft(NAME_LINK_DATASET, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* make an external link to the external dataset */ if (H5Lcreate_external(ext_filename, NAME_DATASET_SIMPLE, fid_src, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* make a dangling soft link */ if (H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* make a dangling external link */ if (H5Lcreate_external("no_file", "no_object", fid_src, NAME_LINK_EXTERN_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* close the groups */ if (H5Gclose(gid) < 0) TEST_ERROR; if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the SRC and EXT files */ if (H5Fclose(fid_src) < 0) TEST_ERROR; if (H5Fclose(fid_ext) < 0) TEST_ERROR; /* Create the object copy plist */ if ((plid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; /* Loop over all configurations (expand soft/external links) */ for (expand_soft = 0; expand_soft <= 1; expand_soft++) { for (expand_ext = 0; expand_ext <= 1; expand_ext++) { /* Set the correct copy options on the obj copy plist */ copy_options = 0; if (expand_soft) copy_options |= H5O_COPY_EXPAND_SOFT_LINK_FLAG; if (expand_ext) copy_options |= H5O_COPY_EXPAND_EXT_LINK_FLAG; if (H5Pset_copy_object(plid, copy_options) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files * aren't the same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the group from SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, plid, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* If expand_soft is set to true, verify that the soft link is now a * hard link, and compare the expanded dataset, then delete it and * re-add it as a soft link so compare_groups() works */ if (expand_soft) { /* Check link type */ if (H5Lget_info2(fid_dst, NAME_LINK_SOFT, &linfo, H5P_DEFAULT) < 0) TEST_ERROR; if (linfo.type != H5L_TYPE_HARD) FAIL_PUTS_ERROR("Soft link was not expanded to a hard link"); /* Compare datasets */ if ((did = H5Dopen2(fid_src, NAME_LINK_DATASET, H5P_DEFAULT)) < 0) TEST_ERROR; if ((did2 = H5Dopen2(fid_dst, NAME_LINK_SOFT, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* Delete expanded dataset, add soft link */ if (H5Ldelete(fid_dst, NAME_LINK_SOFT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Lcreate_soft(NAME_LINK_DATASET, fid_dst, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* Close datasets */ if (H5Dclose(did) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; } /* end if */ /* If expand_ext is set to true, verify that the external link is * now a hard link, and compare the expanded dataset, then delete it * and re-add it as an external link so compare_groups() works */ if (expand_ext) { /* Check link type */ if (H5Lget_info2(fid_dst, NAME_LINK_EXTERN, &linfo, H5P_DEFAULT) < 0) TEST_ERROR; if (linfo.type != H5L_TYPE_HARD) FAIL_PUTS_ERROR("External link was not expanded to a hard link"); /* Compare datasets */ if ((fid_ext = H5Fopen(ext_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; if ((did = H5Dopen2(fid_ext, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((did2 = H5Dopen2(fid_dst, NAME_LINK_EXTERN, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* Delete expanded dataset, add external link */ if (H5Ldelete(fid_dst, NAME_LINK_EXTERN, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Lcreate_external(ext_filename, NAME_DATASET_SIMPLE, fid_dst, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* Close datasets and external file */ if (H5Dclose(did) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; if (H5Fclose(fid_ext) < 0) TEST_ERROR; } /* end if */ /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the destination group */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the source group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* Now try to copy the group containing the dangling link. They * should always be copied as the same type of link, never expanded * to hard links. */ if (H5Ocopy(fid_src, NAME_GROUP_LINK2, fid_dst, NAME_GROUP_LINK2, plid, H5P_DEFAULT) < 0) TEST_ERROR; /* Open the original and copied groups */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Compare the groups */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* Close groups */ if (H5Gclose(gid2) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; } /* end for */ } /* end for */ /* Close the object copy plist */ if (H5Pclose(plid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Dclose(did2); H5Dclose(did); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_ext); H5Fclose(fid_dst); H5Fclose(fid_src); H5Pclose(plid); } H5E_END_TRY return 1; } /* end test_copy_group_links */ /*------------------------------------------------------------------------- * Function: test_copy_soft_link * * Purpose: Create a soft link in SRC file and copy it to DST file * copy a datast pointed by a soft link to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_soft_link(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t gid = H5I_INVALID_HID; /* Group ID */ hsize_t dim2d[2]; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): opened object through soft link"); } else { TESTING("H5Ocopy(): object through soft link"); } /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* add a dataset to the group */ if ((did = H5Dcreate2(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) FAIL_STACK_ERROR; /* close the group */ if (H5Gclose(gid) < 0) FAIL_STACK_ERROR; /* make a soft link to the dataset */ if (H5Lcreate_soft(NAME_LINK_DATASET, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) FAIL_STACK_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) FAIL_STACK_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_LINK_SOFT, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset through the soft link for copy */ if ((did = H5Dopen2(fid_src, NAME_LINK_SOFT, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Dclose(did2); H5Dclose(did); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_soft_link */ /*------------------------------------------------------------------------- * Function: test_copy_ext_link * * Purpose: Create an external link in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_ext_link(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID, fid_ext = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t gid = H5I_INVALID_HID; /* Group ID */ hsize_t dim2d[2]; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; char ext_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): object through external link"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], src_fapl, dst_filename, sizeof dst_filename); h5_fixname(FILENAME[2], dst_fapl, ext_filename, sizeof ext_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* add a dataset to the group */ if ((did = H5Dcreate2(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* create file to hold external links to the src file */ if ((fid_ext = H5Fcreate(ext_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group in the file that will hold the external link */ if ((gid = H5Gcreate2(fid_ext, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create an external link to the dataset in the source file */ if (H5Lcreate_external(src_filename, NAME_LINK_DATASET, fid_ext, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* close the group and file */ if (H5Gclose(gid) < 0) TEST_ERROR; if (H5Fclose(fid_ext) < 0) TEST_ERROR; /* open the "extern" file with read-only */ if ((fid_ext = H5Fopen(ext_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_ext, NAME_LINK_EXTERN, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset through the external link */ if ((did = H5Dopen2(fid_ext, NAME_LINK_EXTERN, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the EXT file */ if (H5Fclose(fid_ext) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Sclose(sid); H5Dclose(did2); H5Dclose(did); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_ext_link */ /*------------------------------------------------------------------------- * Function: test_copy_exist * * Purpose: Create a simple dataset in SRC file and copy it onto an * existing object in DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_exist(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset IDs */ int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ hsize_t dim2d[2]; /* Dataset dimensions */ int i, j; /* local index variables */ herr_t ret; /* Generic return value */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): existing object"); /* Initialize write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* try to copy the dataset from SRC to DST again (should fail) */ H5E_BEGIN_TRY { ret = H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT); } H5E_END_TRY if (ret >= 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_exist */ /*------------------------------------------------------------------------- * Function: test_copy_path * * Purpose: Create a simple dataset in SRC file and copy it to DST file * using a full path name * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_path(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t gid = H5I_INVALID_HID; /* Group ID */ int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ hsize_t dim2d[2]; /* Dataset dimensions */ int i, j; /* local index variables */ herr_t ret; /* Generic return value */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): full path"); /* Initialize write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create 2D int dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST (should fail - intermediate groups not there) */ H5E_BEGIN_TRY { ret = H5Ocopy(fid_src, NAME_DATASET_SUB_SUB, fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT); } H5E_END_TRY if (ret >= 0) TEST_ERROR; /* Create the intermediate groups in destination file */ if ((gid = H5Gcreate2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; if ((gid = H5Gcreate2(fid_dst, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; if ((gid = H5Gcreate2(fid_dst, NAME_GROUP_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* copy the dataset from SRC to DST, using full path */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Sclose(sid); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_path */ /*------------------------------------------------------------------------- * Function: test_copy_same_file_named_datatype * * Purpose: Create name datatype in SRC file and copy it to same file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_same_file_named_datatype(hid_t fcpl_src, hid_t fapl) { hid_t fid = H5I_INVALID_HID; /* File ID */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ char filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): named datatype in same file"); /* Initialize the filenames */ h5_fixname(FILENAME[0], fapl, filename, sizeof filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create named datatype */ if ((H5Tcommit2(fid, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the datatype from SRC to DST */ if (H5Ocopy(fid, NAME_DATATYPE_SIMPLE, fid, NAME_DATATYPE_SIMPLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied datatype */ if ((tid2 = H5Topen2(fid, NAME_DATATYPE_SIMPLE2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Compare the datatypes */ if (H5Tequal(tid, tid2) != true) TEST_ERROR; /* close the destination datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; /* close the source datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the file */ if (H5Fclose(fid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(tid2); H5Tclose(tid); H5Fclose(fid); } H5E_END_TRY return 1; } /* end test_copy_same_file_named_datatype */ /*------------------------------------------------------------------------- * Function: test_copy_old_layout * * Purpose: Copy dataset that uses the "old" layout version (pre version 3) * format. * * Note: This test uses the "fill_old.h5" file for convenience, since it * has a dataset with the old layout format. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_old_layout(hid_t fcpl_dst, hid_t fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t src_fapl = H5I_INVALID_HID; /* Source file FAPL ID */ const char *src_filename = H5_get_srcdir_filename(FILE_OLD_LAYOUT); /* Corrected test file name */ char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): opened dataset with old layout format"); } else { TESTING("H5Ocopy(): dataset with old layout format"); } /* Initialize the destination filename */ h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* Setup */ if ((src_fapl = h5_fileaccess_flags(H5_FILEACCESS_LIBVER)) < 0) TEST_ERROR; /* open source file (read-only) */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* Close source FAPL */ if (H5Pclose(src_fapl) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (test_open) { /* open the source dataset */ if ((did = H5Dopen2(fid_src, NAME_OLD_FORMAT, H5P_DEFAULT)) < 0) TEST_ERROR; } /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_OLD_FORMAT, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the source dataset */ if ((did = H5Dopen2(fid_src, NAME_OLD_FORMAT, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, NULL) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(src_fapl); H5Dclose(did2); H5Dclose(did); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_old_layout */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compact_named_vl * * Purpose: Create a dataset that uses a named variable length datatype * in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compact_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid_copy = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): compact dataset with named VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* make a copy of the datatype for later use */ if ((tid_copy = H5Tcopy(tid)) < 0) TEST_ERROR; /* named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid_copy, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid_copy, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid_copy) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Dclose(did2); H5Dclose(did); H5Treclaim(tid_copy, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Tclose(tid_copy); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compact_named_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_contig_named_vl * * Purpose: Create a dataset that uses a named variable length datatype * in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_contig_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid_copy = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): contiguous dataset with named VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* make a copy of the datatype for later use */ if ((tid_copy = H5Tcopy(tid)) < 0) TEST_ERROR; /* named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid_copy, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid_copy, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid_copy) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid_copy, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Tclose(tid_copy); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_contig_named_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked_named_vl * * Purpose: Create a dataset that uses a named variable length datatype * in SRC file and copy it to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid_copy = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): chunked and opened dataset with named VLEN datatype"); } else { TESTING("H5Ocopy(): chunked dataset with named VLEN datatype"); } /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* make a copy of the datatype for later use */ if ((tid_copy = H5Tcopy(tid)) < 0) TEST_ERROR; /* named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid_copy, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid_copy, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid_copy) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Dclose(did2); H5Dclose(did); H5Treclaim(tid_copy, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Tclose(tid_copy); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked_named_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compressed_named_vl * * Purpose: Create a dataset that uses a named variable length datatype * in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compressed_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid_copy = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): compressed dataset with named VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].len = i + 1; buf[i].p = (int *)malloc(buf[i].len * sizeof(int)); for (j = 0; j < buf[i].len; j++) ((int *)buf[i].p)[j] = (int)(i * 10 + j); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* make a copy of the datatype for later use */ if ((tid_copy = H5Tcopy(tid)) < 0) TEST_ERROR; /* named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid_copy, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid_copy, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid_copy) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Dclose(did2); H5Dclose(did); H5Treclaim(tid_copy, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Tclose(tid_copy); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compressed_named_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compact_vl_vl * * Purpose: Create a compact dataset w/nested VLEN datatype * in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compact_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j, k; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ hvl_t *tvl; /* Temporary pointer to VL information */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): compact dataset with nested VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].p = malloc((i + 1) * sizeof(hvl_t)); if (buf[i].p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u\n", i); return 1; } /* end if */ buf[i].len = i + 1; for (tvl = (hvl_t *)buf[i].p, j = 0; j < (i + 1); j++, tvl++) { tvl->p = malloc((j + 1) * sizeof(unsigned int)); if (tvl->p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n", i, j); return 1; } /* end if */ tvl->len = j + 1; for (k = 0; k < (j + 1); k++) ((unsigned int *)tvl->p)[k] = i * 100 + j * 10 + k; } /* end for */ } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create nested VL datatype */ if ((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid2, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid2, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Tclose(tid2) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid2, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Pclose(pid); H5Tclose(tid); H5Tclose(tid2); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compact_vl_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_contig_vl_vl * * Purpose: Create a compact dataset w/nested VLEN datatype * in SRC file and copy it to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_contig_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j, k; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ hvl_t *tvl; /* Temporary pointer to VL information */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): contiguous and opened dataset with nested VLEN datatype"); } else { TESTING("H5Ocopy(): contiguous dataset with nested VLEN datatype"); } /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].p = malloc((i + 1) * sizeof(hvl_t)); if (buf[i].p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u\n", i); TEST_ERROR; } /* end if */ buf[i].len = i + 1; for (tvl = (hvl_t *)buf[i].p, j = 0; j < (i + 1); j++, tvl++) { tvl->p = malloc((j + 1) * sizeof(unsigned int)); if (tvl->p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n", i, j); TEST_ERROR; } /* end if */ tvl->len = j + 1; for (k = 0; k < (j + 1); k++) ((unsigned int *)tvl->p)[k] = i * 100 + j * 10 + k; } /* end for */ } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create nested VL datatype */ if ((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid2, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid2, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Tclose(tid2) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid2, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Pclose(pid); H5Tclose(tid); H5Tclose(tid2); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_contig_vl_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked_vl_vl * * Purpose: Create a dataset that uses a named variable length datatype * in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j, k; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ hvl_t *tvl; /* Temporary pointer to VL information */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): chunked dataset with nested VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].p = malloc((i + 1) * sizeof(hvl_t)); if (buf[i].p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u\n", i); TEST_ERROR; } /* end if */ buf[i].len = i + 1; for (tvl = (hvl_t *)buf[i].p, j = 0; j < (i + 1); j++, tvl++) { tvl->p = malloc((j + 1) * sizeof(unsigned int)); if (tvl->p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n", i, j); TEST_ERROR; } /* end if */ tvl->len = j + 1; for (k = 0; k < (j + 1); k++) ((unsigned int *)tvl->p)[k] = i * 100 + j * 10 + k; } /* end for */ } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create nested VL datatype */ if ((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* Set allocation time to early */ if (H5Pset_alloc_time(pid, H5D_ALLOC_TIME_EARLY) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL2, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_VL_VL2, fid_dst, NAME_DATASET_VL_VL2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_FARRAY, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL2, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL2, H5P_DEFAULT)) < 0) TEST_ERROR; if (compare_idx_type(src_fapl, did2, H5D_CHUNK_IDX_NONE, H5D_CHUNK_IDX_BTREE) != true) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid2, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid2, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Tclose(tid2) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Dclose(did2); H5Dclose(did); H5Treclaim(tid2, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Tclose(tid2); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked_vl_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compressed_vl_vl * * Purpose: Create a dataset that uses a named variable length datatype * in SRC file and copy it to DST file * * Note: The parameter "test_open" is added to test for H5Ocopy when * the dataset is open in the file (HDFFV-7853). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compressed_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool test_open) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j, k; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ hvl_t *tvl; /* Temporary pointer to VL information */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (test_open) { TESTING("H5Ocopy(): compressed and opened dataset with nested VLEN datatype"); } else { TESTING("H5Ocopy(): compressed dataset with nested VLEN datatype"); } /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].p = malloc((i + 1) * sizeof(hvl_t)); if (buf[i].p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u\n", i); TEST_ERROR; } /* end if */ buf[i].len = i + 1; for (tvl = (hvl_t *)buf[i].p, j = 0; j < (i + 1); j++, tvl++) { tvl->p = malloc((j + 1) * sizeof(unsigned int)); if (tvl->p == NULL) { TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n", i, j); TEST_ERROR; } /* end if */ tvl->len = j + 1; for (k = 0; k < (j + 1); k++) ((unsigned int *)tvl->p)[k] = i * 100 + j * 10 + k; } /* end for */ } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create nested VL datatype */ if ((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; if (H5Pset_deflate(pid, 9) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; if (!test_open) { /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; } /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (!test_open) { /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; } /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid2, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid2, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Tclose(tid2) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Dclose(did2); H5Dclose(did); H5Treclaim(tid2, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid); H5Tclose(tid2); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compressed_vl_vl */ /* * Common data structure for the copy_dataset_*_cmpd_vl tests. */ typedef struct cmpd_vl_t { int a; hvl_t b; double c; } cmpd_vl_t; /*------------------------------------------------------------------------- * Function: test_copy_dataset_contig_cmpd_vl * * Purpose: Create a contiguous dataset w/VLEN datatype contained in * a compound in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_contig_cmpd_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t tid2 = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t did2 = H5I_INVALID_HID; /* Dataset ID */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ cmpd_vl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): contiguous dataset with compound VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].a = (int)(i * (i - 1)); buf[i].b.len = i + 1; buf[i].b.p = (int *)malloc(buf[i].b.len * sizeof(int)); for (j = 0; j < buf[i].b.len; j++) ((int *)buf[i].b.p)[j] = (int)(i * 10 + j); buf[i].c = 1.0 / ((double)i + 1.0); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid2 = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((tid = H5Tcreate(H5T_COMPOUND, sizeof(cmpd_vl_t))) < 0) TEST_ERROR; if (H5Tinsert(tid, "a", HOFFSET(cmpd_vl_t, a), H5T_NATIVE_INT) < 0) TEST_ERROR; if (H5Tinsert(tid, "b", HOFFSET(cmpd_vl_t, b), tid2) < 0) TEST_ERROR; if (H5Tinsert(tid, "c", HOFFSET(cmpd_vl_t, c), H5T_NATIVE_DOUBLE) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CMPD_VL, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CMPD_VL, fid_dst, NAME_DATASET_CMPD_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CMPD_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CMPD_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Tclose(tid2); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_contig_cmpd_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_chunked_cmpd_vl * * Purpose: Create a chunked dataset w/VLEN datatype contained in a * compound in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_chunked_cmpd_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */ cmpd_vl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): chunked dataset with compound VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].a = (int)(i * (i - 1)); buf[i].b.len = i + 1; buf[i].b.p = (int *)malloc(buf[i].b.len * sizeof(int)); for (j = 0; j < buf[i].b.len; j++) ((int *)buf[i].b.p)[j] = (int)(i * 10 + j); buf[i].c = 1.0 / ((double)i + 1.0); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid2 = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((tid = H5Tcreate(H5T_COMPOUND, sizeof(cmpd_vl_t))) < 0) TEST_ERROR; if (H5Tinsert(tid, "a", HOFFSET(cmpd_vl_t, a), H5T_NATIVE_INT) < 0) TEST_ERROR; if (H5Tinsert(tid, "b", HOFFSET(cmpd_vl_t, b), tid2) < 0) TEST_ERROR; if (H5Tinsert(tid, "c", HOFFSET(cmpd_vl_t, c), H5T_NATIVE_DOUBLE) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CMPD_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* close chunk plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CMPD_VL, fid_dst, NAME_DATASET_CMPD_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CMPD_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CMPD_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Pclose(pid); H5Tclose(tid2); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_chunked_cmpd_vl */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_compact_cmpd_vl * * Purpose: Create a compact dataset w/VLEN datatype contained in a * compound in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_compact_cmpd_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dxpl_id = H5I_INVALID_HID; /* Dataset transfer property list ID */ unsigned int i, j; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ cmpd_vl_t buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): compact dataset with compound VLEN datatype"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) { buf[i].a = (int)(i * (i - 1)); buf[i].b.len = i + 1; buf[i].b.p = (int *)malloc(buf[i].b.len * sizeof(int)); for (j = 0; j < buf[i].b.len; j++) ((int *)buf[i].b.p)[j] = (int)(i * 10 + j); buf[i].c = 1.0 / ((double)i + 1.0); } /* end for */ /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create datatype */ if ((tid2 = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((tid = H5Tcreate(H5T_COMPOUND, sizeof(cmpd_vl_t))) < 0) TEST_ERROR; if (H5Tinsert(tid, "a", HOFFSET(cmpd_vl_t, a), H5T_NATIVE_INT) < 0) TEST_ERROR; if (H5Tinsert(tid, "b", HOFFSET(cmpd_vl_t, b), tid2) < 0) TEST_ERROR; if (H5Tinsert(tid, "c", HOFFSET(cmpd_vl_t, c), H5T_NATIVE_DOUBLE) < 0) TEST_ERROR; /* create and set compact plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_CMPD_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close compact plist */ if (H5Pclose(pid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy the dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_CMPD_VL, fid_dst, NAME_DATASET_CMPD_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the dataset for copy */ if ((did = H5Dopen2(fid_src, NAME_DATASET_CMPD_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* open the destination dataset */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_CMPD_VL, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the destination dataset */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the source dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Reclaim vlen buffer */ if (H5Tdetect_class(tid, H5T_VLEN) == true) { if ((dxpl_id = H5Pcreate(H5P_DATASET_XFER)) < 0) TEST_ERROR; if (H5Pset_vlen_mem_manager(dxpl_id, NULL, NULL, NULL, NULL) < 0) TEST_ERROR; if (H5Treclaim(tid, sid, dxpl_id, buf) < 0) TEST_ERROR; if (H5Pclose(dxpl_id) < 0) TEST_ERROR; } /* end if */ /* close datatype */ if (H5Tclose(tid2) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did2); H5Dclose(did); H5Treclaim(tid, sid, H5P_DEFAULT, buf); H5Pclose(dxpl_id); H5Pclose(pid); H5Tclose(tid2); H5Tclose(tid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_compact_cmpd_vl */ /*------------------------------------------------------------------------- * Function: test_copy_null_ref * * Purpose: Creates 2 datasets with references, one with object and * the other with region references. Copies these datasets * to a new file without expanding references, causing them * to become NULL. Next, copies these references to a third * file with expanding references, to verify that NULL * references are handled correctly. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_null_ref(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Object copy property list ID */ hid_t did1 = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hsize_t dim1d[1] = {2}; /* Dataset dimensions */ hobj_ref_t obj_buf[2]; /* Buffer for object refs */ hdset_reg_ref_t reg_buf[2]; /* Buffer for region refs */ char zeros[MAX(sizeof(obj_buf), sizeof(reg_buf))]; /* Array of zeros, for memcmp */ char src_filename[NAME_BUF_SIZE]; char mid_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): NULL references"); /* Initialize "zeros" array */ memset(zeros, 0, sizeof(zeros)); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], src_fapl, mid_filename, sizeof mid_filename); h5_fixname(FILENAME[2], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* Create source file */ if ((fid1 = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* Create object reference dataset at SRC file */ if ((did1 = H5Dcreate2(fid1, "obj_ref_dset", H5T_STD_REF_OBJ, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create region reference dataset at SRC file */ if ((did2 = H5Dcreate2(fid1, "reg_ref_dset", H5T_STD_REF_DSETREG, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create references */ if (H5Rcreate(&obj_buf[0], did1, ".", H5R_OBJECT, (hid_t)-1) < 0) TEST_ERROR; if (H5Rcreate(&obj_buf[1], did2, ".", H5R_OBJECT, (hid_t)-1) < 0) TEST_ERROR; if (H5Rcreate(®_buf[0], did1, ".", H5R_DATASET_REGION, sid) < 0) TEST_ERROR; if (H5Rcreate(®_buf[1], did2, ".", H5R_DATASET_REGION, sid) < 0) TEST_ERROR; /* Write data into file */ if (H5Dwrite(did1, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_buf) < 0) TEST_ERROR; if (H5Dwrite(did2, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, reg_buf) < 0) TEST_ERROR; /* Close datasets */ if (H5Dclose(did1) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; /* Create middle file */ if ((fid2 = H5Fcreate(mid_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Copy the source file to the middle file. Note the expand references * flag is not set. */ if (H5Ocopy(fid1, "/", fid2, "/A", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* Close source file */ if (H5Fclose(fid1) < 0) TEST_ERROR; /* Open copied datasets */ if ((did1 = H5Dopen2(fid2, "/A/obj_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; if ((did2 = H5Dopen2(fid2, "/A/reg_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; /* Read copied datasets */ if (H5Dread(did1, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_buf) < 0) TEST_ERROR; if (H5Dread(did2, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, reg_buf) < 0) TEST_ERROR; /* Verify that the references contain only "0" bytes */ if (memcmp(obj_buf, zeros, sizeof(obj_buf)) != 0) TEST_ERROR; if (memcmp(reg_buf, zeros, sizeof(reg_buf)) != 0) TEST_ERROR; /* Close datasets */ if (H5Dclose(did1) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; /* Create destination file */ if ((fid1 = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create object copy property list */ if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; /* Set the "expand references" flag */ if (H5Pset_copy_object(pid, H5O_COPY_EXPAND_REFERENCE_FLAG) < 0) TEST_ERROR; /* Copy the middle file to the destination file. Note the expand references * flag *is* set, even though the references are now NULL. */ if (H5Ocopy(fid2, "/", fid1, "/AA", pid, H5P_DEFAULT) < 0) TEST_ERROR; /* Close source file */ if (H5Fclose(fid2) < 0) TEST_ERROR; /* Open copied datasets */ if ((did1 = H5Dopen2(fid1, "/AA/A/obj_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; if ((did2 = H5Dopen2(fid1, "/AA/A/reg_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; /* Read copied datasets */ if (H5Dread(did1, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_buf) < 0) TEST_ERROR; if (H5Dread(did2, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, reg_buf) < 0) TEST_ERROR; /* Verify that the references contain only "0" bytes */ if (memcmp(obj_buf, zeros, sizeof(obj_buf)) != 0) TEST_ERROR; if (memcmp(reg_buf, zeros, sizeof(reg_buf)) != 0) TEST_ERROR; /* Close */ if (H5Pclose(pid) < 0) TEST_ERROR; if (H5Dclose(did1) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; if (H5Fclose(fid1) < 0) TEST_ERROR; if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Dclose(did1); H5Dclose(did2); H5Fclose(fid1); H5Fclose(fid2); H5Sclose(sid); } H5E_END_TRY return 1; } /* end test_copy_null_ref */ /*------------------------------------------------------------------------- * Function: test_copy_null_ref_open * * Purpose: Creates 2 datasets with references, one with object and * the other with region references. Copies these datasets * to a new file without expanding references, causing them * to become NULL. Next, copies these references to a third * file with expanding references, to verify that NULL * references are handled correctly. * * Note: this is copied from test_copy_null_ref() with modifications * to test for opened datasets in the files. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_null_ref_open(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID, fid3 = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t pid = H5I_INVALID_HID; /* Object copy property list ID */ hid_t did1 = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t did3 = H5I_INVALID_HID, did4 = H5I_INVALID_HID; /* Dataset IDs */ hid_t did5 = H5I_INVALID_HID, did6 = H5I_INVALID_HID; /* Dataset IDs */ hid_t dcpl = H5I_INVALID_HID; /* Dataset creation property list */ hsize_t chunk_dim1d[1] = {2}; /* Chunk dimensions */ hsize_t dim1d[1] = {3}; /* Dataset dimensions */ hobj_ref_t obj_buf[3]; /* Buffer for object refs */ hdset_reg_ref_t reg_buf[3]; /* Buffer for region refs */ char zeros[MAX(sizeof(obj_buf), sizeof(reg_buf))]; /* Array of zeros, for memcmp */ char src_filename[NAME_BUF_SIZE]; char mid_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): NULL references for opened datasets"); /* Initialize "zeros" array */ memset(zeros, 0, sizeof(zeros)); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], src_fapl, mid_filename, sizeof mid_filename); h5_fixname(FILENAME[2], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* Create source file */ if ((fid1 = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(dcpl, 1, chunk_dim1d) < 0) TEST_ERROR; if (H5Pset_deflate(dcpl, 9) < 0) TEST_ERROR; if (H5Pset_chunk_opts(dcpl, H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS) < 0) TEST_ERROR; /* Create object reference dataset at SRC file */ if ((did1 = H5Dcreate2(fid1, "obj_ref_dset", H5T_STD_REF_OBJ, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create region reference dataset at SRC file */ if ((did2 = H5Dcreate2(fid1, "reg_ref_dset", H5T_STD_REF_DSETREG, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create references */ if (H5Rcreate(&obj_buf[0], did1, ".", H5R_OBJECT, (hid_t)-1) < 0) TEST_ERROR; if (H5Rcreate(&obj_buf[1], did2, ".", H5R_OBJECT, (hid_t)-1) < 0) TEST_ERROR; if (H5Rcreate(®_buf[0], did1, ".", H5R_DATASET_REGION, sid) < 0) TEST_ERROR; if (H5Rcreate(®_buf[1], did2, ".", H5R_DATASET_REGION, sid) < 0) TEST_ERROR; /* Write data into file */ if (H5Dwrite(did1, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_buf) < 0) TEST_ERROR; if (H5Dwrite(did2, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, reg_buf) < 0) TEST_ERROR; /* Create middle file */ if ((fid2 = H5Fcreate(mid_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Copy the source file to the middle file. Note the expand references * flag is not set. */ if (H5Ocopy(fid1, "/", fid2, "/A", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* Close datasets in source file */ if (H5Dclose(did1) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; /* Close source file */ if (H5Fclose(fid1) < 0) TEST_ERROR; /* Open copied datasets */ if ((did3 = H5Dopen2(fid2, "/A/obj_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; if ((did4 = H5Dopen2(fid2, "/A/reg_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; /* Read copied datasets */ if (H5Dread(did3, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_buf) < 0) TEST_ERROR; if (H5Dread(did4, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, reg_buf) < 0) TEST_ERROR; /* Verify that the references contain only "0" bytes */ if (memcmp(obj_buf, zeros, sizeof(obj_buf)) != 0) TEST_ERROR; if (memcmp(reg_buf, zeros, sizeof(reg_buf)) != 0) TEST_ERROR; /* Create destination file */ if ((fid3 = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create object copy property list */ if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; /* Set the "expand references" flag */ if (H5Pset_copy_object(pid, H5O_COPY_EXPAND_REFERENCE_FLAG) < 0) TEST_ERROR; /* Copy the middle file to the destination file. Note the expand references * flag *is* set, even though the references are now NULL. */ if (H5Ocopy(fid2, "/", fid3, "/AA", pid, H5P_DEFAULT) < 0) TEST_ERROR; /* Close datasets in middle file */ if (H5Dclose(did3) < 0) TEST_ERROR; if (H5Dclose(did4) < 0) TEST_ERROR; /* Close the middle file */ if (H5Fclose(fid2) < 0) TEST_ERROR; /* Open copied datasets */ if ((did5 = H5Dopen2(fid3, "/AA/A/obj_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; if ((did6 = H5Dopen2(fid3, "/AA/A/reg_ref_dset", H5P_DEFAULT)) < 0) TEST_ERROR; /* Read copied datasets */ if (H5Dread(did5, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_buf) < 0) TEST_ERROR; if (H5Dread(did6, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, reg_buf) < 0) TEST_ERROR; /* Verify that the references contain only "0" bytes */ if (memcmp(obj_buf, zeros, sizeof(obj_buf)) != 0) TEST_ERROR; if (memcmp(reg_buf, zeros, sizeof(reg_buf)) != 0) TEST_ERROR; /* Close */ if (H5Pclose(pid) < 0) TEST_ERROR; if (H5Pclose(dcpl) < 0) TEST_ERROR; if (H5Dclose(did5) < 0) TEST_ERROR; if (H5Dclose(did6) < 0) TEST_ERROR; if (H5Fclose(fid3) < 0) TEST_ERROR; if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(pid); H5Pclose(dcpl); H5Sclose(sid); H5Dclose(did1); H5Dclose(did2); H5Dclose(did3); H5Dclose(did4); H5Dclose(did5); H5Dclose(did6); H5Fclose(fid1); H5Fclose(fid2); H5Fclose(fid3); } H5E_END_TRY return 1; } /* end test_copy_null_ref_open */ /*------------------------------------------------------------------------- * Function: test_copy_attr_crt_order * * Purpose: Tests copying attributes with creation order tracked, with * and without creation order being indexed. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_attr_crt_order(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID; /* File IDs */ hid_t gcplid = H5I_INVALID_HID; /* Group creation property list ID */ hid_t gid1 = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): attributes with creation order"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], src_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* Create source file */ if ((fid1 = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create GCPL */ if ((gcplid = H5Pcreate(H5P_GROUP_CREATE)) < 0) TEST_ERROR; /* Create group with creation order tracked */ if (H5Pset_attr_creation_order(gcplid, H5P_CRT_ORDER_TRACKED) < 0) TEST_ERROR; if ((gid1 = H5Gcreate2(fid1, NAME_GROUP_TOP, H5P_DEFAULT, gcplid, H5P_DEFAULT)) < 0) TEST_ERROR; /* Add attributes to group */ if (test_copy_attach_attributes(gid1, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Close group */ if (H5Gclose(gid1) < 0) TEST_ERROR; /* Create group with creation order tracked and indexed */ if (H5Pset_attr_creation_order(gcplid, H5P_CRT_ORDER_TRACKED | H5P_CRT_ORDER_INDEXED) < 0) TEST_ERROR; if ((gid1 = H5Gcreate2(fid1, NAME_GROUP_TOP2, H5P_DEFAULT, gcplid, H5P_DEFAULT)) < 0) TEST_ERROR; /* Add attributes to group */ if (test_copy_attach_attributes(gid1, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Close group */ if (H5Gclose(gid1) < 0) TEST_ERROR; /* Close GCPL */ if (H5Pclose(gcplid) < 0) TEST_ERROR; /* Create destination file */ if ((fid2 = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Copy the groups to the destination file */ if (H5Ocopy(fid1, NAME_GROUP_TOP, fid2, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid1, NAME_GROUP_TOP2, fid2, NAME_GROUP_TOP2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* Open groups with creation order tracked */ if ((gid1 = H5Gopen2(fid1, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) TEST_ERROR; if ((gid2 = H5Gopen2(fid2, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) TEST_ERROR; /* Compare the attributes */ if (compare_std_attributes(gid1, gid2, H5P_DEFAULT) != true) TEST_ERROR; /* Close groups */ if (H5Gclose(gid1) < 0) TEST_ERROR; if (H5Gclose(gid2) < 0) TEST_ERROR; /* Open groups with creation order tracked and indexed */ if ((gid1 = H5Gopen2(fid1, NAME_GROUP_TOP2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((gid2 = H5Gopen2(fid2, NAME_GROUP_TOP2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Compare the attributes */ if (compare_std_attributes(gid1, gid2, H5P_DEFAULT) != true) TEST_ERROR; /* Close groups */ if (H5Gclose(gid1) < 0) TEST_ERROR; if (H5Gclose(gid2) < 0) TEST_ERROR; /* Close */ if (H5Fclose(fid1) < 0) TEST_ERROR; if (H5Fclose(fid2) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Gclose(gid1); H5Gclose(gid2); H5Pclose(gcplid); H5Fclose(fid1); H5Fclose(fid2); } H5E_END_TRY return 1; } /* end test_copy_attr_crt_order */ /*------------------------------------------------------------------------- * Function: test_copy_committed_datatype_merge * * Purpose: Tests the "merge committed datatypes" feature of H5Ocopy. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_committed_datatype_merge(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src1 = H5I_INVALID_HID, fid_src2 = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src1_filename[NAME_BUF_SIZE]; char src2_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; int token_cmp; if (reopen) { TESTING("H5Ocopy(): merging committed datatypes with reopen"); } /* end if */ else TESTING("H5Ocopy(): merging committed datatypes"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src1_filename, sizeof src1_filename); h5_fixname(FILENAME[3], src_fapl, src2_filename, sizeof src2_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source files */ if ((fid_src1 = H5Fcreate(src1_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; if ((fid_src2 = H5Fcreate(src2_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* * Populate source file 1 */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid_src1, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src1, NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file 1 */ if (H5Fclose(fid_src1) < 0) TEST_ERROR; /* * Populate source file 2 */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid_src2, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src2, NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file 1 */ if (H5Fclose(fid_src2) < 0) TEST_ERROR; /* open the source files with read-only */ if ((fid_src1 = H5Fopen(src1_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; if ((fid_src2 = H5Fopen(src2_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge named dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * First copy each entire file to the destination file (each with their own * group), and verify the committed datatypes are merged */ /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy SRC1 to DST */ if (H5Ocopy(fid_src1, "/", fid_dst, NAME_GROUP_TOP, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* copy SRC2 to DST */ if (H5Ocopy(fid_src2, "/", fid_dst, NAME_GROUP_TOP2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open SRC1 committed dtype, get token */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_TOP "/" NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open SRC1 dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_TOP "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open SRC2 committed dtype, check token */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_TOP2 "/" NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* Open SRC2 dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_TOP2 "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Now copy only the datasets to the destination file, and verify the committed * datatypes are merged */ /* recreate destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* copy SRC1 to DST */ if (H5Ocopy(fid_src1, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* copy SRC2 to DST */ if (H5Ocopy(fid_src2, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open SRC1 dset dtype, get token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open SRC2 dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC files */ if (H5Fclose(fid_src1) < 0) TEST_ERROR; if (H5Fclose(fid_src2) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src1); H5Fclose(fid_src2); H5Fclose(fid_dst); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_committed_datatype_merge */ /*------------------------------------------------------------------------- * Function: test_copy_committed_datatype_merge_same_file * * Purpose: Tests the "merge committed datatypes" feature of H5Ocopy, * while copying to the same file. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_committed_datatype_merge_same_file(hid_t fcpl, hid_t fapl, bool reopen) { hid_t fid = H5I_INVALID_HID; /* File ID */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID; /* Group ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char filename[NAME_BUF_SIZE]; int token_cmp; if (reopen) TESTING("H5Ocopy(): merging committed datatypes to the source file with reopen"); else TESTING("H5Ocopy(): merging committed datatypes to the source file"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filename */ h5_fixname(FILENAME[0], fapl, filename, sizeof filename); /* Reset file token checking info */ token_reset(); /* create file */ if ((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* * Populate first group */ /* Create group */ if ((gid = H5Gcreate2(fid, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid, NAME_GROUP_TOP "/" NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid, NAME_GROUP_TOP "/" NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* * Populate second group */ /* Create group */ if ((gid = H5Gcreate2(fid, NAME_GROUP_TOP2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid, NAME_GROUP_TOP2 "/" NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid, NAME_GROUP_TOP2 "/" NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * First copy each group to the destination group 3 (each with their own * group), and verify the committed datatypes are merged as expected. All * datatypes copied should reference (share a token with) the * corresponding source datatype. */ /* Create destination group */ if ((gid = H5Gcreate2(fid, NAME_GROUP_TOP3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* copy group 1 to DST */ if (H5Ocopy(fid, NAME_GROUP_TOP, fid, NAME_GROUP_TOP3 "/" NAME_GROUP_TOP, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* copy group 2 to DST */ if (H5Ocopy(fid, NAME_GROUP_TOP2, fid, NAME_GROUP_TOP3 "/" NAME_GROUP_TOP2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid) < 0) TEST_ERROR; if ((fid = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) TEST_ERROR; } /* end if */ /* Open group 1 source committed dtype, get token */ if ((tid = H5Topen2(fid, NAME_GROUP_TOP "/" NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open group 1 source dset dtype, check token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open group 1 committed dtype, check token */ if ((tid = H5Topen2(fid, NAME_GROUP_TOP3 "/" NAME_GROUP_TOP "/" NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* Open group 1 dset dtype, check token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP3 "/" NAME_GROUP_TOP "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open group 2 source committed dtype, get token and make sure it is * different from group 1 source committed dtype */ if ((tid = H5Topen2(fid, NAME_GROUP_TOP2 "/" NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open group 2 source dset dtype, check token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP2 "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open group 2 committed dtype, check token */ if ((tid = H5Topen2(fid, NAME_GROUP_TOP3 "/" NAME_GROUP_TOP2 "/" NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* Open group 2 dset dtype, check token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP3 "/" NAME_GROUP_TOP2 "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* * Now copy only the datasets to the destination group, and verify the committed * datatypes are merged as expected */ /* Create destination group */ if ((gid = H5Gcreate2(fid, NAME_GROUP_TOP4, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* copy SRC1 to DST */ if (H5Ocopy(fid, NAME_GROUP_TOP "/" NAME_DATASET_SIMPLE, fid, NAME_GROUP_TOP4 "/" NAME_DATASET_SIMPLE, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* copy SRC2 to DST */ if (H5Ocopy(fid, NAME_GROUP_TOP2 "/" NAME_DATASET_SIMPLE, fid, NAME_GROUP_TOP4 "/" NAME_DATASET_SIMPLE2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid) < 0) TEST_ERROR; if ((fid = H5Fopen(filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR; } /* end if */ /* Open group 1 source dset dtype, get token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open group 1 dset dtype, check token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP4 "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open group 2 source dset dtype, get token and make sure it is * different from group 1 source dset dtype */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP2 "/" NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open group 2 dset dtype, check token */ if ((did = H5Dopen2(fid, NAME_GROUP_TOP4 "/" NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close file */ if (H5Fclose(fid) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_committed_datatype_merge_same_file */ /*------------------------------------------------------------------------- * Function: test_copy_committed_dt_merge_sugg * * Purpose: Tests the "merge committed datatypes" feature of H5Ocopy, and * uses the suggestion list feature * (H5Padd_merge_committed_dtype_path). * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_committed_dt_merge_sugg(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; int token_cmp; if (reopen) TESTING("H5Ocopy(): merging committed datatypes with suggestions and reopen"); else TESTING("H5Ocopy(): merging committed datatypes with suggestions"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* * Populate source file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* * Populate destination file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype "a" */ if ((H5Tcommit2(fid_dst, "/a", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype "b" */ if ((H5Tcommit2(fid_dst, "/b", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * First copy dataset using "/b" as a suggestion, and verify that it uses * datatype "b" in the destination file */ /* Add datatype suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/b") < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "b", get token */ if ((tid = H5Topen2(fid_dst, "/b", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Now free suggestions, copy dataset without any suggestions, and verify * that it uses datatype "a" in the destination file */ /* Free suggestions */ if (H5Pfree_merge_committed_dtype_paths(ocpypl_id) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Delete destination dataset */ /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "a", get token */ if ((tid = H5Topen2(fid_dst, "/a", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open dset 2 dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open committed dtype "b", get token */ if ((tid = H5Topen2(fid_dst, "/b", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_committed_dt_merge_sugg */ /*------------------------------------------------------------------------- * Function: test_copy_committed_dt_merge_attr * * Purpose: Tests the "merge committed datatypes" feature of H5Ocopy, with * an attribute using an anonymous committed type in the * destination. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_committed_dt_merge_attr(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t aid = H5I_INVALID_HID; /* Attribute ID */ hid_t gid = H5I_INVALID_HID; /* Group ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; int token_cmp; if (reopen) TESTING("H5Ocopy(): merging committed datatypes with attributes and reopen"); else TESTING("H5Ocopy(): merging committed datatypes with attributes"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* * Populate source file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* * Populate destination file */ /* Create group */ if ((gid = H5Gcreate2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* create anonymous committed datatype */ if ((H5Tcommit_anon(fid_dst, tid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create attribute at SRC file */ if ((aid = H5Acreate2(gid, "attr", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Awrite(aid, tid, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the attribute */ if (H5Aclose(aid) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * Copy dataset and verify that it uses the same committed datatype as the * already existing attribute in the destination file. */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open attribute dtype, get token */ if ((aid = H5Aopen_by_name(fid_dst, NAME_GROUP_TOP, "attr", H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Aget_type(aid)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* Open dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Aclose(aid); H5Gclose(gid); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_committed_dt_merge_attr */ /* * Defines used for the committed datatype tests */ #define SRC_ROOT_GROUP "src_root" #define ROOT_NDT_INT "root_ndt_int" #define GROUP_NDT_SHORT "group_ndt_short" #define SRC_GRP "src_grp" #define DST_GRP "dst_grp" #define DST_GRP2 "dst_grp2" #define SRC_NDT_SHORT "src_ndt_short" #define SRC_NDT_INT "src_ndt_int" #define SRC_NDT_INT2 "src_ndt_int2" #define SRC_NDT_FLOAT "src_ndt_float" #define SRC_NDT_DOUBLE "src_ndt_double" #define DST_NDT_SHORT "dst_ndt_short" #define DST_NDT_INT "dst_ndt_int" #define DST_NDT_FLOAT "dst_ndt_float" #define DST_NDT_DOUBLE "dst_ndt_double" #define SRC_NDT_DSET "src_ndt_dset" #define SRC_NDT_DSET2 "src_ndt_dset2" #define SRC_NDT_DSET3 "src_ndt_dset3" #define SRC_DSET "src_dset" #define SRC_DSET1 "src_dset1" #define SRC_ATTR "src_attr" #define DST_ATTR_ANON_SHORT "dst_attr_anon_short" #define DST_ATTR_ANON_INT "dst_attr_anon_int" #define DST_ATTR "dst_attr" #define DST_ATTR2 "dst_attr2" /*------------------------------------------------------------------------- * Function: test_copy_cdt_hier_merge * * Purpose: Tests the "merge committed datatypes" feature of H5Ocopy: * SRC file: * Create committed datatypes at / and /g0 * Create datasets with native type and committed datatypes at /g0 * DST file: * Create attributes with anonymous committed datatypes at /uncopied * * Copy / at SRC to DST * Copy /g0 at SRC to DST * Copy the datasets in /g0 at SRC to DST /uncopied * Verify that committed datatypes are copied and merged correctly * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_cdt_hier_merge(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID; /* Group IDs */ hid_t f_tid = H5I_INVALID_HID; /* Datatype ID for root group */ hid_t g_tid = H5I_INVALID_HID; /* Datatype ID for group */ hid_t anon_tid = H5I_INVALID_HID; /* Anonymous datatype */ hid_t aid = H5I_INVALID_HID; /* Attribute ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ int i; /* Local index variable */ hsize_t dim1d[1]; /* dimension sizes */ int buf[DIM_SIZE_1]; /* Buffer for data */ H5O_token_t exp_token_int, exp_token_short; /* Expected object tokenes */ H5O_info2_t oinfo; /* Object info */ char src_filename[NAME_BUF_SIZE]; /* Source file name */ char dst_filename[NAME_BUF_SIZE]; /* Destination file name */ int token_cmp; if (reopen) TESTING("H5Ocopy(): hier. of committed datatypes and merging with reopen"); else TESTING("H5Ocopy(): hier. of committed datatypes and merging "); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* * Populate source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create and commit committed datatype (int) to root group */ if ((f_tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, ROOT_NDT_INT, f_tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create group /g0 */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create and commit committed datatype (short) to group /g0 */ if ((g_tid = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, GROUP_NDT_SHORT, g_tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create dataset of native int in /g0 */ if ((did = H5Dcreate2(gid, SRC_DSET1, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to dataset */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* create dataset of committed datatype (short) in /g0 */ if ((did = H5Dcreate2(gid, SRC_NDT_DSET2, g_tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to dataset */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* create dataset of committed datatype (int) in /g0 */ if ((did = H5Dcreate2(gid, SRC_NDT_DSET3, f_tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to dataset */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the datatypes */ if (H5Tclose(f_tid) < 0) TEST_ERROR; if (H5Tclose(g_tid) < 0) TEST_ERROR; /* close group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* * Populate destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* create group /uncopied */ if ((gid = H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create and commit anonymous datatype (short) to /uncopied */ if ((anon_tid = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit_anon(gid, anon_tid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create attribute of anon ndt (short) in /uncopied */ if ((aid = H5Acreate2(gid, DST_ATTR_ANON_SHORT, anon_tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the attribute */ if (H5Aclose(aid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(anon_tid) < 0) TEST_ERROR; /* create and commit anonymous datatype (int) to /uncopied */ if ((anon_tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit_anon(gid, anon_tid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create attribute of anon ndt (int) in /uncopied */ if ((aid = H5Acreate2(gid, DST_ATTR_ANON_INT, anon_tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the attribute */ if (H5Aclose(aid) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(anon_tid) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; if (reopen) { /* reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; } /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create ocpl and set merge committed datatype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * Test 1 : copy / in SRC file to DST file */ if (H5Ocopy(fid_src, "/", fid_dst, SRC_ROOT_GROUP, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* get token of committed datatype at root group */ if ((tid = H5Topen2(fid_dst, SRC_ROOT_GROUP "/" ROOT_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token_int, &oinfo.token, sizeof(exp_token_int)); if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype at /g0 */ if ((tid = H5Topen2(fid_dst, SRC_ROOT_GROUP NAME_GROUP_TOP "/" GROUP_NDT_SHORT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token_short, &oinfo.token, sizeof(exp_token_short)); if (H5Tclose(tid) < 0) TEST_ERROR; /* verify the datatype of first dataset is not committed */ if ((did = H5Dopen2(fid_dst, SRC_ROOT_GROUP NAME_GROUP_TOP "/" SRC_DSET1, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Tcommitted(tid)) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for second dataset */ if ((did = H5Dopen2(fid_dst, SRC_ROOT_GROUP NAME_GROUP_TOP "/" SRC_NDT_DSET2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_short, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for third dataset */ if ((did = H5Dopen2(fid_dst, SRC_ROOT_GROUP NAME_GROUP_TOP "/" SRC_NDT_DSET3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_int, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* * Test 2: copy /g0 in SRC to DST */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* get token of committed datatype at /g0 */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_TOP "/" GROUP_NDT_SHORT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_short, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* verify the datatype of first dataset is not committed */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_TOP "/" SRC_DSET1, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Tcommitted(tid)) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for second dataset */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_TOP "/" SRC_NDT_DSET2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_short, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for third dataset */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_TOP "/" SRC_NDT_DSET3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_int, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* * Test 3: copy datasets in /g0 at SRC to DST group /uncopied */ if (H5Ocopy(fid_src, NAME_GROUP_TOP "/" SRC_DSET1, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_DSET1, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_GROUP_TOP "/" SRC_NDT_DSET2, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_GROUP_TOP "/" SRC_NDT_DSET3, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET3, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* Open attribute with anon ndt (short), get token */ if ((aid = H5Aopen_by_name(fid_dst, NAME_GROUP_UNCOPIED, DST_ATTR_ANON_SHORT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Aget_type(aid)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_short, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* Open attribute with anon ndt (int), get token */ if ((aid = H5Aopen_by_name(fid_dst, NAME_GROUP_UNCOPIED, DST_ATTR_ANON_INT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Aget_type(aid)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_int, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* verify the datatype of first dataset is not committed */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_DSET1, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Tcommitted(tid)) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for second dataset */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_short, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for third dataset */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token_int, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(tid); H5Tclose(f_tid); H5Tclose(g_tid); H5Tclose(anon_tid); H5Pclose(ocpypl_id); H5Aclose(aid); H5Dclose(did); H5Sclose(sid); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_cdt_hier_merge */ /*------------------------------------------------------------------------- * Function: test_copy_cdt_merge_cdt * * Purpose: Tests the "merge committed datatypes" feature of H5Ocopy: * SRC file: * Create committed datatype (short) * Create committed datatype (float) * Create committed datatype (int), with attribute of ndt int * Create committed datatype (double), with attribute of anon ndt short * DST file: * Create committed datatype (int) * Create committed datatype (float), with attribute of native int * Create committed datatype (double), with attribute of anon ndt short * * Copy / at SRC to DST * Verify that committed datatypes are copied and merged correctly * * NOTE: * Comparison of attributes are not implemented yet. * Further tests will be added in the future. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_cdt_merge_cdt(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid1 = H5I_INVALID_HID, tid2 = H5I_INVALID_HID; /* Datatype IDs */ hid_t tid3 = H5I_INVALID_HID, tid4 = H5I_INVALID_HID; /* Datatype IDs */ hid_t tid5 = H5I_INVALID_HID, tid = H5I_INVALID_HID; /* Datatype IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t aid = H5I_INVALID_HID; /* Attribute ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ hsize_t dim1d[1]; /* dimension sizes */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src_filename[NAME_BUF_SIZE]; /* Source file name */ char dst_filename[NAME_BUF_SIZE]; /* Destination file name */ int token_cmp; if (reopen) TESTING("H5Ocopy(): merging various committed datatypes with reopen"); else TESTING("H5Ocopy(): merging various committed datatypes"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* * Populate source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create committed datatype (short) */ if ((tid1 = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, SRC_NDT_SHORT, tid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create committed datatype (float) */ if ((tid2 = H5Tcopy(H5T_NATIVE_FLOAT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, SRC_NDT_FLOAT, tid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create committed datatype (int) */ if ((tid3 = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, SRC_NDT_INT, tid3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create an attribute of committed datatype (int); attach to committed datatype (int) */ if ((aid = H5Acreate2(tid3, SRC_ATTR, tid3, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* create committed datatype (double) */ if ((tid4 = H5Tcopy(H5T_NATIVE_DOUBLE)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, SRC_NDT_DOUBLE, tid4, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an anonymous committed datatype (short) */ if ((tid5 = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit_anon(fid_src, tid5, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute of anon ndt (short); attach to committed datatype (double) */ if ((aid = H5Acreate2(tid4, SRC_ATTR, tid5, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* close the committed datatypes */ if (H5Tclose(tid1) < 0) TEST_ERROR; if (H5Tclose(tid2) < 0) TEST_ERROR; if (H5Tclose(tid3) < 0) TEST_ERROR; if (H5Tclose(tid4) < 0) TEST_ERROR; if (H5Tclose(tid5) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* * Populate destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* create committed datatype (integer) */ if ((tid1 = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_INT, tid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create committed datatype (float) */ if ((tid2 = H5Tcopy(H5T_NATIVE_FLOAT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_FLOAT, tid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute of native integer; attach to committed datatype (float) */ if ((aid = H5Acreate2(tid2, DST_ATTR, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* create committed datatype (double) */ if ((tid3 = H5Tcopy(H5T_NATIVE_DOUBLE)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_DOUBLE, tid3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create anonymous committed datatype (short) */ if ((tid4 = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit_anon(fid_dst, tid4, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute of anon ndt (short); attach to ndt (double) */ if ((aid = H5Acreate2(tid3, DST_ATTR, tid4, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* close the committed datatypes */ if (H5Tclose(tid1) < 0) TEST_ERROR; if (H5Tclose(tid2) < 0) TEST_ERROR; if (H5Tclose(tid3) < 0) TEST_ERROR; if (H5Tclose(tid4) < 0) TEST_ERROR; /* close the dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* copy everything in SRC to DST */ if (H5Ocopy(fid_src, "/", fid_dst, SRC_ROOT_GROUP, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* * Verification */ /* get token of committed datatype: /src_root/src_ndt_double */ if ((tid = H5Topen2(fid_dst, "/" SRC_ROOT_GROUP "/" SRC_NDT_DOUBLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype: /dst_ndt_double */ if ((tid = H5Topen2(fid_dst, "/" DST_NDT_DOUBLE, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype: /src_root/src_ndt_float */ if ((tid = H5Topen2(fid_dst, "/" SRC_ROOT_GROUP "/" SRC_NDT_FLOAT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype: /dst_ndt_float */ if ((tid = H5Topen2(fid_dst, "/" DST_NDT_FLOAT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype: /src_root/src_ndt_int */ if ((tid = H5Topen2(fid_dst, "/" SRC_ROOT_GROUP "/" SRC_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype: /dst_ndt_int */ if ((tid = H5Topen2(fid_dst, "/" DST_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* get token of committed datatype: /src_root/src_ndt_short */ if ((tid = H5Topen2(fid_dst, "/" SRC_ROOT_GROUP "/" SRC_NDT_SHORT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* open attribute; get its dtype; get dtype's token: /src_root/src_ndt_double/dst_attr */ if ((aid = H5Aopen_by_name(fid_dst, "/" SRC_ROOT_GROUP "/" SRC_NDT_DOUBLE, DST_ATTR, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Aget_type(aid)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; /* close the files */ if (H5Fclose(fid_src) < 0) TEST_ERROR; if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the object copy property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(ocpypl_id); H5Tclose(tid); H5Tclose(tid1); H5Tclose(tid2); H5Tclose(tid3); H5Tclose(tid4); H5Tclose(tid5); H5Aclose(aid); H5Sclose(sid); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_cdt_merge_cdt */ /*------------------------------------------------------------------------- * Function: test_copy_cdt_merge_suggs * * Purpose: Tests the suggested searching paths feature (H5Padd_merge_committed_dtype_path) * is correctly applied in merging the committed datatypes. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_cdt_merge_suggs(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; int token_cmp; if (reopen) TESTING("H5Ocopy(): merging committed datatypes with suggestions and reopen"); else TESTING("H5Ocopy(): merging committed datatypes with suggestions"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* * Populate source file */ /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create committed datatype: "/src_ndt_int" */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, SRC_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* * Populate destination file */ /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* create committed datatype: "/dst_ndt_int" */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* Create a group /uncopied */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 1 */ /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* copy "/src_ndt_int" from SRC file to "/uncopied/src_ndt_int" at DST file */ if (H5Ocopy(fid_src, SRC_NDT_INT, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open committed dtype "/dst_ndt_int", get its token */ if ((tid = H5Topen2(fid_dst, DST_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* check token of "/uncopied/src_ndt_int" */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 2 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* add committed datatype search suggestion: "/uncopied/src_ndt_int" */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT) < 0) TEST_ERROR; /* copy "/src_ndt_int" from SRC file to "/src_ndt_int" at DST file */ if (H5Ocopy(fid_src, SRC_NDT_INT, fid_dst, SRC_NDT_INT, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open committed dtype "/uncopied/src_ndt_int", get its token */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* check token of "/src_ndt_int" */ if ((tid = H5Topen2(fid_dst, SRC_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 3 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* remove "/uncopied/src_ndt_int" from DST file */ if (H5Ldelete(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT, H5P_DEFAULT) < 0) TEST_ERROR; /* copy "/src_ndt_int" from SRC file to "/uncopied/src_ndt_int" at DST file */ /* use default ocpypl_id -- without merging and suggestion */ if (H5Ocopy(fid_src, SRC_NDT_INT, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* copy "/src_ndt_int" from SRC file to "/src_ndt_int2" at DST file */ /* copy with merging and search suggestion: "/uncopied/src_ndt_int" */ if (H5Ocopy(fid_src, SRC_NDT_INT, fid_dst, SRC_NDT_INT2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "/uncopied/src_ndt_int", get its token */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* check token of "/src_ndt_int2" */ if ((tid = H5Topen2(fid_dst, SRC_NDT_INT2, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 4 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* add committed datatype search suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, DST_NDT_INT) < 0) TEST_ERROR; /* copy "src_ndt_int" from SRC file to "/uncopied/src_ndt_int2" at DST file */ /* copy with merging and search suggestion: "/dst_ndt_int, /uncopied/src_ndt_int" */ if (H5Ocopy(fid_src, SRC_NDT_INT, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "/dst_dt_int", get its token */ if ((tid = H5Topen2(fid_dst, DST_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* check token of "/uncopied/src_ndt_int2" */ if ((tid = H5Topen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_INT2, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_cdt_merge_suggs */ /*------------------------------------------------------------------------- * Function: test_copy_cdt_merge_dset_suggs * * Purpose: Tests the suggested searching paths feature (H5Padd_merge_committed_dtype_path) * is correctly applied in merging the committed datatypes of datasets. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_cdt_merge_dset_suggs(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; int token_cmp; if (reopen) TESTING("H5Ocopy(): merging committed datatypes of datasets with suggestions and reopen"); else TESTING("H5Ocopy(): merging committed datatypes of datasets with suggestions"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* * Populate source file */ /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create committed datatype: "/src_ndt_int" */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_src, SRC_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create dataset */ if ((did = H5Dcreate2(fid_src, SRC_NDT_DSET, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to dataset */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* * Populate destination file */ /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* create committed datatype: "/dst_ndt_int" */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Create a group "/uncopied" */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* * Test 1 */ /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* copy "/src_ndt_dset" from SRC file to "/uncopied/src_ndt_dset" at DST file */ if (H5Ocopy(fid_src, SRC_NDT_DSET, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "/dst_ndt_int", get its token */ if ((tid = H5Topen2(fid_dst, DST_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* check token of datatype for the copied dataset: "/uncopied/src_ndt_dset" */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 2 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* add committed datatype search suggestion: "/uncopied/src_ndt_dset" */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET) < 0) TEST_ERROR; /* copy "/src_ndt_dset" from SRC file to "/src_ndt_dset" at DST file */ if (H5Ocopy(fid_src, SRC_NDT_DSET, fid_dst, SRC_NDT_DSET, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype dataset "/uncopied/src_ndt_dset", get its datatype token */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for the copied dataset: "/src_ndt_dset" */ if ((did = H5Dopen2(fid_dst, SRC_NDT_DSET, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 3 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* remove "/uncopied/src_ndt_dset" */ if (H5Ldelete(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET, H5P_DEFAULT) < 0) TEST_ERROR; /* copy "src_ndt_dset" from SRC file to "/uncopied/src_ndt_dset" at DST file */ /* use default ocpypl_id -- without merging and suggestion */ if (H5Ocopy(fid_src, SRC_NDT_DSET, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* copy "src_ndt_dset" from SRC file to "/src_ndt_dset2" at DST file */ /* use merging and suggested searching path: "/uncopied/src_ndt_dset" */ if (H5Ocopy(fid_src, SRC_NDT_DSET, fid_dst, SRC_NDT_DSET2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open the copied dataset: /uncopied/src_ndt_dset", get its token */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for the copied dataset: "/src_ndt_dset2" */ if ((did = H5Dopen2(fid_dst, SRC_NDT_DSET2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 4 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* add committed datatype search suggestion: "/src_ndt_dset" */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, SRC_NDT_DSET) < 0) TEST_ERROR; /* copy /src_ndt_dset from SRC file to /uncopied/src_ndt_dset2 at DST */ /* use merging and suggested search paths: "/src_ndt_dset, /uncopied/src_ndt_dset" */ if (H5Ocopy(fid_src, SRC_NDT_DSET, fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open the copied dataset: "/src_ndt_dset", get its datatype token */ if ((did = H5Dopen2(fid_dst, SRC_NDT_DSET, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* check token of datatype for the copied dataset: /uncopied/src_ndt_dset2 */ if ((did = H5Dopen2(fid_dst, NAME_GROUP_UNCOPIED "/" SRC_NDT_DSET2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_cdt_merge_dset_suggs */ /*------------------------------------------------------------------------- * Function: test_copy_cdt_merge_all_suggs * * Purpose: Tests the merging committed datatype + search suggestion feature. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_cdt_merge_all_suggs(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t gid = H5I_INVALID_HID; /* Group ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t aid = H5I_INVALID_HID; /* Attribute ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t exp_did = H5I_INVALID_HID; /* Dataset ID */ hid_t tid_short = H5I_INVALID_HID; /* Datatype ID */ hid_t exp_tid = H5I_INVALID_HID; /* Expected datatype ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ hsize_t dim1d[1]; /* Dataset dimensions */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; if (reopen) TESTING("H5Ocopy(): merging different committed datatypes with suggestions and reopen"); else TESTING("H5Ocopy(): merging different committed datatypes with suggestions"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* * Populate source file */ /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* set dataspace dimension, create dataspace */ dim1d[0] = DIM_SIZE_1; if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create a group */ if ((gid = H5Gcreate2(fid_src, SRC_GRP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create committed datatype in group */ if ((tid = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, SRC_NDT_SHORT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create first dataset in group */ if ((did = H5Dcreate2(gid, SRC_NDT_DSET, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Dclose(did) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create committed datatype in group */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, SRC_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create second dataset in group */ if ((did = H5Dcreate2(gid, SRC_NDT_DSET2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Dclose(did) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create third dataset in group */ if ((did = H5Dcreate2(gid, SRC_DSET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* get datatype */ if ((tid_short = H5Topen2(fid_src, "/" SRC_GRP "/" SRC_NDT_SHORT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute attached to the dataset */ if ((aid = H5Acreate2(did, SRC_ATTR, tid_short, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; if (H5Tclose(tid_short) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* * Populate DST file */ /* create DST file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* set dataspace dimension, create dataspace */ dim1d[0] = DIM_SIZE_2; if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* create committed datatype in root group */ if ((tid = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_SHORT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create committed datatype in root group */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute attached to committed datatype */ if ((aid = H5Acreate2(tid, DST_ATTR, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create committed datatype in root group */ if ((tid = H5Tcopy(H5T_NATIVE_FLOAT)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_FLOAT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute attached to committed datatype */ if ((aid = H5Acreate2(tid, DST_ATTR, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create a group */ if ((gid = H5Gcreate2(fid_dst, DST_GRP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create a committed datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, DST_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute attached to committed datatype */ if ((aid = H5Acreate2(gid, DST_ATTR, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create an attribute attached to group */ if ((aid = H5Acreate2(gid, DST_ATTR2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* create a group */ if ((gid = H5Gcreate2(fid_dst, DST_GRP2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create a committed datatype in group */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, DST_NDT_INT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute attached to group */ if ((aid = H5Acreate2(gid, DST_ATTR, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* create a committed datatype in group */ if ((tid = H5Tcopy(H5T_NATIVE_SHORT)) < 0) TEST_ERROR; if ((H5Tcommit2(gid, DST_NDT_SHORT, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* create a committed datatype at root group */ if ((tid = H5Tcopy(H5T_NATIVE_DOUBLE)) < 0) TEST_ERROR; if ((H5Tcommit2(fid_dst, DST_NDT_DOUBLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* get datatype */ if ((tid_short = H5Topen2(fid_dst, "/" DST_GRP2 "/" DST_NDT_SHORT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute attached to committed datatype */ if ((aid = H5Acreate2(tid, DST_ATTR, tid_short, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* closing */ if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid_short) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 1 */ /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* copy "/src_grp/src_ndt_dset2" from SRC file to DST file */ if (H5Ocopy(fid_src, "/" SRC_GRP "/" SRC_NDT_DSET2, fid_dst, "A_src_dset2", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* get datatype for attribute attached to the group */ if ((aid = H5Aopen_by_name(fid_dst, DST_GRP, DST_ATTR, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((exp_tid = H5Aget_type(aid)) < 0) TEST_ERROR; /* open datatype of dataset */ if ((did = H5Dopen2(fid_dst, "A_src_dset2", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(exp_tid) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 2 */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* add committed datatype search suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/" DST_GRP2) < 0) TEST_ERROR; /* copy "/src_grp/src_ndt_dset2" from SRC file to DST file */ if (H5Ocopy(fid_src, "/" SRC_GRP "/" SRC_NDT_DSET2, fid_dst, "B_src_dset2", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* get datatype for attribute attached to the group */ if ((aid = H5Aopen_by_name(fid_dst, DST_GRP2, DST_ATTR, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((exp_tid = H5Aget_type(aid)) < 0) TEST_ERROR; /* open datatype of dataset */ if ((did = H5Dopen2(fid_dst, "B_src_dset2", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(exp_tid) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 3 */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* add another committed datatype search suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/" DST_GRP "/" DST_NDT_INT) < 0) TEST_ERROR; /* copy "/src_grp/src_ndt_dset2" from SRC file to DST file */ if (H5Ocopy(fid_src, "/" SRC_GRP "/" SRC_NDT_DSET2, fid_dst, "C_src_dset2", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open committed dtype "/dst_grp/dst_dt_int", get its token */ if ((exp_tid = H5Topen2(fid_dst, "/" DST_GRP "/" DST_NDT_INT, H5P_DEFAULT)) < 0) TEST_ERROR; /* open datatype of dataset */ if ((did = H5Dopen2(fid_dst, "C_src_dset2", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(exp_tid) < 0) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 4 */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* delete the group */ if (H5Ldelete(fid_dst, "/" DST_GRP, H5P_DEFAULT) < 0) TEST_ERROR; /* free the search suggestion paths */ if (H5Pfree_merge_committed_dtype_paths(ocpypl_id) < 0) TEST_ERROR; /* copy "/src_grp/src_ndt_dset2" from SRC file to DST file */ if (H5Ocopy(fid_src, "/" SRC_GRP "/" SRC_NDT_DSET2, fid_dst, "D_src_dset2", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open datatype of dataset */ if ((exp_did = H5Dopen2(fid_dst, "A_src_dset2", H5P_DEFAULT)) < 0) TEST_ERROR; if ((exp_tid = H5Dget_type(exp_did)) < 0) TEST_ERROR; /* Open datatype of dataset */ if ((did = H5Dopen2(fid_dst, "C_src_dset2", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* open datatype of dataset */ if ((did = H5Dopen2(fid_dst, "D_src_dset2", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* closing */ if (H5Tclose(exp_tid) < 0) TEST_ERROR; if (H5Dclose(exp_did) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 5 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Add committed datatype search suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/" DST_NDT_DOUBLE) < 0) TEST_ERROR; /* copy "/src_grp/src_ndt_dset" from SRC file to DST file */ if (H5Ocopy(fid_src, "/" SRC_GRP "/" SRC_NDT_DSET, fid_dst, "A_src_dset", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open attribute's dtype attached to committed datatype /dst_ndt_double */ if ((aid = H5Aopen_by_name(fid_dst, DST_NDT_DOUBLE, DST_ATTR, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if ((exp_tid = H5Aget_type(aid)) < 0) TEST_ERROR; /* Open datatype of dataset, check token */ if ((did = H5Dopen2(fid_dst, "A_src_dset", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; if (H5Aclose(aid) < 0) TEST_ERROR; if (H5Tclose(exp_tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Test 6 */ /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Add committed datatype search suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/" DST_NDT_SHORT) < 0) TEST_ERROR; /* copy "/src_grp/src_ndt_dset" from SRC file to DST file */ if (H5Ocopy(fid_src, "/" SRC_GRP "/" SRC_NDT_DSET, fid_dst, "B_src_dset", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* open committed dtype "/dst_ndt_short" */ if ((exp_tid = H5Topen2(fid_dst, "/" DST_NDT_SHORT, H5P_DEFAULT)) < 0) TEST_ERROR; /* open datatype of dataset, check token */ if ((did = H5Dopen2(fid_dst, "B_src_dset", H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; /* should be the same */ if (!H5Tequal(exp_tid, tid)) TEST_ERROR; /* closing */ if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; if (H5Tclose(exp_tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Tclose(tid_short); H5Tclose(exp_tid); H5Dclose(did); H5Dclose(exp_did); H5Aclose(aid); H5Sclose(sid); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_cdt_merge_all_suggs */ /*------------------------------------------------------------------------- * Function: test_copy_set_mcdt_search_cb * * Purpose: Tests the "H5Pset_mcdt_search_cb" feature of H5Ocopy to * stop or continue the search of global list * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ /* User data struct for the callback */ typedef struct mcdt_search_cb_ud { H5O_mcdt_search_ret_t search_action; /* Return value for callback */ unsigned called; /* # of times callback has been called */ } mcdt_search_cb_ud; /* The user callback function */ static H5O_mcdt_search_ret_t mcdt_search_cb(void *_udata) { mcdt_search_cb_ud *udata = (mcdt_search_cb_ud *)_udata; udata->called++; return (udata->search_action); } /* mcdt_search_cb() */ static int test_copy_set_mcdt_search_cb(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ H5O_info2_t oinfo; /* Object info */ H5O_token_t exp_token; /* Expected object token */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; mcdt_search_cb_ud cb_udata; /* User data for callback */ int token_cmp; if (reopen) TESTING("H5Ocopy(): H5Pset_mcdt_search_cb and reopen"); else TESTING("H5Ocopy(): H5Pset_mcdt_search_cb"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* * Populate source file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* named datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied group in destination file */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* * Populate destination file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype "a" */ if ((H5Tcommit2(fid_dst, "/a", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype "b" */ if ((H5Tcommit2(fid_dst, "/b", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * First copy dataset using "/b" as a suggestion, and verify that it uses * datatype "b" in the destination file */ /* Add datatype suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/b") < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "b", get token */ if ((tid = H5Topen2(fid_dst, "/b", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open dset dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Set callback to continue the search */ cb_udata.search_action = H5O_MCDT_SEARCH_CONT; cb_udata.called = 0; /* Free suggestions */ if (H5Pfree_merge_committed_dtype_paths(ocpypl_id) < 0) TEST_ERROR; /* Add datatype suggestion to group "/uncopied" */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, NAME_GROUP_UNCOPIED) < 0) TEST_ERROR; /* Continue the global search */ if (H5Pset_mcdt_search_cb(ocpypl_id, mcdt_search_cb, &cb_udata) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* Verify callback has been called exactly once */ if (cb_udata.called != 1) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "a", get token */ if ((tid = H5Topen2(fid_dst, "/a", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open copied dataset and its dtype, check token */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Stop the search, default action is to create an anonymous committed datatype */ cb_udata.search_action = H5O_MCDT_SEARCH_STOP; cb_udata.called = 0; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE3, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* Verify callback has been called exactly once */ if (cb_udata.called != 1) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "a", get token */ if ((tid = H5Topen2(fid_dst, "/a", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open the copied dataset and get its dtype, tokens should not be equal */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open committed dtype "b", get token */ if ((tid = H5Topen2(fid_dst, "/b", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open the copied dataset and get its dtype, tokens should not be equal */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Stop the search, default action is to create an anonymous committed datatype. * Disable suggestion list. */ cb_udata.search_action = H5O_MCDT_SEARCH_STOP; cb_udata.called = 0; /* Free suggestions */ if (H5Pfree_merge_committed_dtype_paths(ocpypl_id) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Delete dataset */ if (H5Ldelete(fid_dst, NAME_DATASET_SIMPLE3, H5P_DEFAULT) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE3, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; /* Verify callback has been called exactly once */ if (cb_udata.called != 1) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Open committed dtype "a", get token */ if ((tid = H5Topen2(fid_dst, "/a", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open the copied dataset and get its dtype, tokens should not be equal */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Open committed dtype "b", get token */ if ((tid = H5Topen2(fid_dst, "/b", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; memcpy(&exp_token, &oinfo.token, sizeof(exp_token)); if (H5Tclose(tid) < 0) TEST_ERROR; /* Open the copied dataset and get its dtype, tokens should not be equal */ if ((did = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE3, H5P_DEFAULT)) < 0) TEST_ERROR; if ((tid = H5Dget_type(did)) < 0) TEST_ERROR; if (H5Oget_info3(tid, &oinfo, H5O_INFO_BASIC) < 0) TEST_ERROR; if (H5Otoken_cmp(tid, &oinfo.token, &exp_token, &token_cmp) < 0) TEST_ERROR; if (!token_cmp) TEST_ERROR; if (H5Tclose(tid) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_set_mcdt_search_cb */ /*------------------------------------------------------------------------- * Function: test_copy_set_get_mcdt_cb * * Purpose: Tests for the "H5Pset/get_mcdt_search_cb" feature of H5Ocopy. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ /* The user callback functions */ static H5O_mcdt_search_ret_t mcdt_search_cbA(void *_udata) { H5O_mcdt_search_ret_t *action = (H5O_mcdt_search_ret_t *)_udata; return (*action); } /* mcdt_search_cb() */ static H5O_mcdt_search_ret_t mcdt_search_cbB(void *_udata) { H5O_mcdt_search_ret_t *action = (H5O_mcdt_search_ret_t *)_udata; return (*action); } /* mnt_search_cb() */ /* The main test function */ static int test_copy_set_get_mcdt_search_cb(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, bool reopen) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t ocpypl_id = H5I_INVALID_HID; /* Object copy plist ID */ unsigned int i; /* Local index variables */ hsize_t dim1d[1]; /* Dataset dimensions */ int buf[DIM_SIZE_1]; /* Buffer for writing data */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; H5O_mcdt_search_cb_t mcdt_cb = NULL; /* The callback function */ H5O_mcdt_search_ret_t mcdt_udataA; /* User data for callback */ H5O_mcdt_search_ret_t mcdt_udataB; /* User data for callback */ H5O_mcdt_search_ret_t *mcdt_udata_p = NULL; /* Pointer to user data for callback */ if (reopen) TESTING("H5Ocopy(): H5Pset/get_mcdt_search_cb and reopen"); else TESTING("H5Ocopy(): H5Pset/get_mcdt_search_cb"); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) buf[i] = (int)i; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim1d[0] = DIM_SIZE_1; /* create dataspace */ if ((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR; /* * Populate source file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create dataset at SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data into file */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied group in destination file */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* * Populate destination file */ /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype "a" */ if ((H5Tcommit2(fid_dst, "/a", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* create datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* committed datatype "b" */ if ((H5Tcommit2(fid_dst, "/b", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* open the source file with read-only */ if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* Create ocpl and set merge committed dtype flag */ if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_MERGE_COMMITTED_DTYPE_FLAG) < 0) TEST_ERROR; /* * First copy dataset using "/b" as a suggestion, and verify that it uses * datatype "b" in the destination file */ /* Add datatype suggestion */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, "/b") < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ /* Verify "get" routine functionality */ if (H5Pget_mcdt_search_cb(ocpypl_id, &mcdt_cb, (void **)&mcdt_udata_p) < 0) TEST_ERROR; if (mcdt_cb != NULL) TEST_ERROR; if (mcdt_udata_p != NULL) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Set callback to continue the search */ mcdt_udataA = H5O_MCDT_SEARCH_CONT; /* Free suggestions */ if (H5Pfree_merge_committed_dtype_paths(ocpypl_id) < 0) TEST_ERROR; /* Add datatype suggestion to group "/uncopied" */ if (H5Padd_merge_committed_dtype_path(ocpypl_id, NAME_GROUP_UNCOPIED) < 0) TEST_ERROR; /* Continue the global search */ if (H5Pset_mcdt_search_cb(ocpypl_id, mcdt_search_cbA, &mcdt_udataA) < 0) TEST_ERROR; /* open the destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE2, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ mcdt_cb = NULL; mcdt_udata_p = NULL; /* Verify "get" routine functionality */ if (H5Pget_mcdt_search_cb(ocpypl_id, &mcdt_cb, (void **)&mcdt_udata_p) < 0) TEST_ERROR; if (mcdt_cb != mcdt_search_cbA) TEST_ERROR; if (mcdt_udata_p != &mcdt_udataA) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* * Stop the search, default action is to create an anonymous committed datatype */ mcdt_udataB = H5O_MCDT_SEARCH_STOP; if (H5Pset_mcdt_search_cb(ocpypl_id, mcdt_search_cbA, &mcdt_udataB) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE3, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ mcdt_cb = NULL; mcdt_udata_p = NULL; /* Verify "get" routine functionality */ if (H5Pget_mcdt_search_cb(ocpypl_id, &mcdt_cb, (void **)&mcdt_udata_p) < 0) TEST_ERROR; if (mcdt_cb != mcdt_search_cbA) TEST_ERROR; if (mcdt_udata_p != &mcdt_udataB) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* Free suggestions */ if (H5Pfree_merge_committed_dtype_paths(ocpypl_id) < 0) TEST_ERROR; if (H5Pset_mcdt_search_cb(ocpypl_id, mcdt_search_cbB, &mcdt_udataB) < 0) TEST_ERROR; /* open destination file */ if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Delete dataset */ if (H5Ldelete(fid_dst, NAME_DATASET_SIMPLE3, H5P_DEFAULT) < 0) TEST_ERROR; /* copy SRC dset to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE3, ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (reopen) { /* Reopen file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; if ((fid_dst = H5Fopen(dst_filename, H5F_ACC_RDONLY, dst_fapl)) < 0) TEST_ERROR; } /* end if */ mcdt_cb = NULL; mcdt_udata_p = NULL; /* Verify "get" routine functionality */ if (H5Pget_mcdt_search_cb(ocpypl_id, &mcdt_cb, (void **)&mcdt_udata_p) < 0) TEST_ERROR; if (mcdt_cb != mcdt_search_cbB) TEST_ERROR; if (mcdt_udata_p != &mcdt_udataB) TEST_ERROR; /* Close destination file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close property list */ if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Fclose(fid_src); H5Fclose(fid_dst); H5Tclose(tid); H5Sclose(sid); H5Dclose(did); H5Pclose(ocpypl_id); } H5E_END_TRY return 1; } /* end test_copy_set_get_mcdt_search_cb */ /*------------------------------------------------------------------------- * Function: test_copy_iterate * * Purpose: Tests iterating over objects in the root group, copying * all of them. * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static herr_t test_copy_iterate_cb(hid_t loc_id, const char *name, const H5L_info2_t H5_ATTR_UNUSED *link_info, void *op_data) { hid_t dst_loc_id = *((hid_t *)op_data); if (H5Ocopy(loc_id, name, dst_loc_id, name, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; return (H5_ITER_CONT); error: return (H5_ITER_ERROR); } /* end test_copy_iterate_cb */ /* * Test for a bug with copying of v1 object headers where the * new object header would end up with a gap in the header data, * which v1 object header shouldn't have. */ static int test_copy_cdt_v1_header_bug(hid_t fcpl_src, hid_t src_fapl) { hid_t file_id = H5I_INVALID_HID; hid_t type_id = H5I_INVALID_HID; hid_t ocpypl_id = H5I_INVALID_HID; char src_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): bug with copying v1 object headers"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); if ((file_id = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; if ((type_id = H5Tcreate(H5T_STRING, 385)) < 0) TEST_ERROR; if (H5Tset_strpad(type_id, H5T_STR_NULLPAD) < 0) TEST_ERROR; if (H5Tset_cset(type_id, H5T_CSET_ASCII) < 0) TEST_ERROR; if (H5Tcommit2(file_id, "committed_str_type", type_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if ((ocpypl_id = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; if (H5Pset_copy_object(ocpypl_id, H5O_COPY_WITHOUT_ATTR_FLAG) < 0) TEST_ERROR; if (H5Ocopy(file_id, "committed_str_type", file_id, "committed_str_type2", ocpypl_id, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Tclose(type_id) < 0) TEST_ERROR; if (H5Pclose(ocpypl_id) < 0) TEST_ERROR; if (H5Fclose(file_id) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Tclose(type_id); H5Pclose(ocpypl_id); H5Fclose(file_id); } H5E_END_TRY return 1; } static int test_copy_iterate(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid1 = H5I_INVALID_HID, fid2 = H5I_INVALID_HID; /* File IDs */ hid_t gid = H5I_INVALID_HID; /* Group ID */ int i; char grp_name[16]; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): inside H5Literate() callback"); /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], src_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* Create source file */ if ((fid1 = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* Create groups */ for (i = 0; i < 9; i++) { snprintf(grp_name, sizeof(grp_name), "grp%d", i); if ((gid = H5Gcreate2(fid1, grp_name, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; } /* end for */ /* Create destination file */ if ((fid2 = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Close files */ if (H5Fclose(fid1) < 0) TEST_ERROR; if (H5Fclose(fid2) < 0) TEST_ERROR; /* Reopen files */ if ((fid1 = H5Fopen(src_filename, H5F_ACC_RDWR, src_fapl)) < 0) TEST_ERROR; if ((fid2 = H5Fopen(dst_filename, H5F_ACC_RDWR, dst_fapl)) < 0) TEST_ERROR; /* Iterate over links in the root group, copying each object */ if ((gid = H5Gopen2(fid1, "/", H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Literate2(gid, H5_INDEX_NAME, H5_ITER_INC, NULL, test_copy_iterate_cb, &fid2) < 0) TEST_ERROR; /* Close */ if (H5Gclose(gid) < 0) TEST_ERROR; if (H5Fclose(fid1) < 0) TEST_ERROR; if (H5Fclose(fid2) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Gclose(gid); H5Fclose(fid1); H5Fclose(fid2); } H5E_END_TRY return 1; } /* end test_copy_iterate */ /*------------------------------------------------------------------------- * Function: test_copy_option * * Purpose: Create a group in SRC file and copy it to DST file * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_option(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl, unsigned flag, bool crt_intermediate_grp, const char *test_desciption) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID, fid_ext = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t did = H5I_INVALID_HID; /* Dataset ID */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID, gid_ref = H5I_INVALID_HID; /* Group IDs */ hid_t gid_sub = H5I_INVALID_HID, gid_sub_sub = H5I_INVALID_HID; /* Sub-group ID */ hid_t pid = H5I_INVALID_HID, lcpl_id = H5I_INVALID_HID; /* Property IDs */ unsigned cpy_flags; /* Object copy flags */ int depth = -1; /* Copy depth */ hsize_t dim2d[2]; int buf[DIM_SIZE_1][DIM_SIZE_2]; int i, j; char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING(test_desciption); /* set initial data values */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create group at the SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* add a dataset to the top group */ if ((did = H5Dcreate2(gid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* create a sub-group */ if ((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* add a dataset to the sub group */ if ((did = H5Dcreate2(gid_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; /* create sub-sub-group */ if ((gid_sub_sub = H5Gcreate2(gid_sub, NAME_GROUP_SUB_SUB2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* add a dataset to the sub sub group */ if ((did = H5Dcreate2(gid_sub_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* close dataset */ if (H5Dclose(did) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; if (H5Gclose(gid_sub_sub) < 0) TEST_ERROR; if (H5Gclose(gid_sub) < 0) TEST_ERROR; /* close the group */ if (H5Gclose(gid) < 0) FAIL_STACK_ERROR; if ((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) { /* Create group to copy */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; if (H5Lcreate_soft(NAME_DATASET_SUB_SUB, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; if (H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; if (H5Gclose(gid) < 0) FAIL_STACK_ERROR; /* Create group to compare with */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; if (H5Lcreate_hard(fid_src, NAME_DATASET_SUB_SUB, H5L_SAME_LOC, NAME_LINK_SOFT2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; if (H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; if (H5Gclose(gid) < 0) FAIL_STACK_ERROR; } /* end if */ if ((flag & H5O_COPY_EXPAND_EXT_LINK_FLAG) > 0) { char ext_filename[NAME_BUF_SIZE]; h5_fixname(FILENAME[2], src_fapl, ext_filename, sizeof ext_filename); /* Create the external file and dataset */ if ((fid_ext = H5Fcreate(ext_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; if ((did = H5Dcreate2(fid_ext, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; if (H5Fclose(fid_ext) < 0) TEST_ERROR; /* Create group to copy */ if (!(flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG)) { if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; } /* end if */ else if ((gid = H5Gopen2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Lcreate_external(ext_filename, NAME_DATASET_SIMPLE, fid_src, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Lcreate_external("no_file", "no_object", fid_src, NAME_LINK_EXTERN_DANGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* Create group to compare with */ if (!(flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG)) { if ((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; } /* end if */ else if ((gid = H5Gopen2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((did = H5Dcreate2(fid_src, NAME_LINK_EXTERN2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; if (H5Lcreate_external("no_file", "no_object", fid_src, NAME_LINK_EXTERN_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Dclose(did) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* Close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; } /* end if */ if ((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) { if ((gid_ref = H5Gcreate2(fid_src, NAME_GROUP_REF, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create an attribute of object references */ if (attach_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR; /* create an attribute of region references */ if (attach_reg_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR; /* create a dataset of region references */ if (create_reg_ref_dataset(fid_src, gid_ref) < 0) TEST_ERROR; /* Close group holding reference objects */ if (H5Gclose(gid_ref) < 0) TEST_ERROR; } /* end if */ /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* open the source file with read-only */ /* (except when expanding soft links */ if ((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) { if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDWR, src_fapl)) < 0) TEST_ERROR; } /* end if */ else if ((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create property to pass copy options */ if ((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR; /* set options for object copy */ if (H5Pset_copy_object(pid, flag) < 0) TEST_ERROR; /* Verify object copy flags */ if (H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR; if (cpy_flags != flag) TEST_ERROR; /* copy the group from SRC to DST */ if (crt_intermediate_grp) { /* Create link creation plist to pass in intermediate group creation */ if ((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) TEST_ERROR; if (H5Pset_create_intermediate_group(lcpl_id, true) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, "/new_g0/new_g00", pid, lcpl_id) < 0) TEST_ERROR; if (H5Pclose(lcpl_id) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, "/new_g0/new_g00", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; } else if (((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) || ((flag & H5O_COPY_EXPAND_EXT_LINK_FLAG) > 0)) { if (H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, pid, H5P_DEFAULT) < 0) TEST_ERROR; if ((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) /* Unlink dataset to copy from original location */ /* (So group comparison works properly) */ if (H5Ldelete(fid_src, NAME_DATASET_SUB_SUB, H5P_DEFAULT) < 0) FAIL_STACK_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; } else if (flag & (H5O_COPY_WITHOUT_ATTR_FLAG | H5O_COPY_PRESERVE_NULL_FLAG)) { if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; } else if (flag & H5O_COPY_SHALLOW_HIERARCHY_FLAG) { if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* Set the copy depth */ depth = 1; } else if ((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) { if (H5Ocopy(fid_src, NAME_GROUP_REF, fid_dst, NAME_GROUP_REF, pid, H5P_DEFAULT) < 0) TEST_ERROR; /* open the group for copy */ if ((gid = H5Gopen2(fid_src, NAME_GROUP_REF, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; /* open the destination group */ if ((gid2 = H5Gopen2(fid_dst, NAME_GROUP_REF, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR; } else { /* Unknown flag */ TEST_ERROR; } /* end else */ /* Check if the groups are equal */ if (compare_groups(gid, gid2, pid, depth, flag) != true) TEST_ERROR; if (H5Gclose(gid2) < 0) TEST_ERROR; if (H5Gclose(gid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; /* close properties */ if (H5Pclose(pid) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Pclose(lcpl_id); H5Pclose(pid); H5Sclose(sid); H5Dclose(did); H5Gclose(gid_ref); H5Gclose(gid_sub); H5Gclose(gid2); H5Gclose(gid); H5Fclose(fid_dst); H5Fclose(fid_src); H5Fclose(fid_ext); } H5E_END_TRY return 1; } /* end test_copy_option */ /*------------------------------------------------------------------------- * Function: test_copy_dataset_open * * Purpose: To ensure that H5Ocopy() copies data of opened dataset correctly. * This is for bug fix HDFFV-7853. * * Test Case 1: * Create a dataset with attributes in SRC file * Copy the opened dataset to another location in the same file * Copy the opened dataset to DST file * Close the dataset * * Test Case 2: * Reopen the dataset, write new data to the dataset * Copy the opened dataset to another location in the same file * Copy the opened dataset to to DST file * Close the dataset * * Test Case 3: * Create a committed datatype * Create a dataset with the committed datatype in SRC file * Open the committed datatype * Copy the opened dataset (with the opened committed datatype) to another location in the same file * Copy the opened dataset (with the opened committed datatype) to DST file * Close the dataset and the committed datatype * * Test Case 4: * Create a group with attributes, create a dataset in the group * Copy the opened group (together with the opened dataset) to another location in the same file * Copy the opened group (together with the opened dataset) to DST file * Close the group and the dataset * * Return: Success: 0 * Failure: number of errors * *------------------------------------------------------------------------- */ static int test_copy_dataset_open(hid_t fcpl_src, hid_t fcpl_dst, hid_t src_fapl, hid_t dst_fapl) { hid_t fid_src = H5I_INVALID_HID, fid_dst = H5I_INVALID_HID; /* File IDs */ hid_t sid = H5I_INVALID_HID; /* Dataspace ID */ hid_t tid = H5I_INVALID_HID; /* Datatype ID */ hid_t did = H5I_INVALID_HID, did2 = H5I_INVALID_HID; /* Dataset IDs */ hid_t did3 = H5I_INVALID_HID, did4 = H5I_INVALID_HID; /* Dataset IDs */ hid_t gid = H5I_INVALID_HID, gid2 = H5I_INVALID_HID; /* Group IDs */ hid_t pid = H5I_INVALID_HID; /* Dataset creation property list */ hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimension sizes */ int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ int newbuf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */ hsize_t dim2d[2]; /* Dataset dimensions */ int i, j; /* local index variables */ char src_filename[NAME_BUF_SIZE]; char dst_filename[NAME_BUF_SIZE]; TESTING("H5Ocopy(): copying objects while opened"); /* Initialize write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) buf[i][j] = 10000 + 100 * i + j; /* Initialize another write buffer */ for (i = 0; i < DIM_SIZE_1; i++) for (j = 0; j < DIM_SIZE_2; j++) newbuf[i][j] = 100 * i + j; /* Initialize the filenames */ h5_fixname(FILENAME[0], src_fapl, src_filename, sizeof src_filename); h5_fixname(FILENAME[1], dst_fapl, dst_filename, sizeof dst_filename); /* Reset file token checking info */ token_reset(); /* create source file */ if ((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, src_fapl)) < 0) TEST_ERROR; /* create destination file */ if ((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, dst_fapl)) < 0) TEST_ERROR; /* Create an uncopied object in destination file so that tokens in source and destination files aren't the * same */ if (H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* Set dataspace dimensions */ dim2d[0] = DIM_SIZE_1; dim2d[1] = DIM_SIZE_2; /* create 2D dataspace */ if ((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR; /* create and set chunk plist */ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR; if (H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR; /* create 2D dataset in SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* create 2D chunked dataset in SRC file */ if ((did2 = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to the dataset */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; if (H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* attach attributes to the dataset */ if (test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR; if (test_copy_attach_attributes(did2, H5T_NATIVE_INT) < 0) TEST_ERROR; /* * Test case 1 */ /* * Copy within the same file */ /* copy the opened dataset to another location in SRC file */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_src, NAME_DATASET_SIMPLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied dataset */ if ((did3 = H5Dopen2(fid_src, NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR; if ((did4 = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did3, H5P_DEFAULT, buf) != true) TEST_ERROR; if (compare_datasets(did2, did4, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the copied dataset */ if (H5Dclose(did3) < 0) TEST_ERROR; if (H5Dclose(did4) < 0) TEST_ERROR; /* * Copy to another file */ /* copy the opened dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied dataset in DST file */ if ((did3 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((did4 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did3, H5P_DEFAULT, buf) != true) TEST_ERROR; if (compare_datasets(did2, did4, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the copied dataset in DST file */ if (H5Dclose(did3) < 0) TEST_ERROR; if (H5Dclose(did4) < 0) TEST_ERROR; /* close the dataset in SRC file */ if (H5Dclose(did) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; /* * Test case 2 */ /* reopen the dataset in SRC file */ if ((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR; if ((did2 = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR; /* write another set of data to the dataset */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, newbuf) < 0) TEST_ERROR; if (H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, newbuf) < 0) TEST_ERROR; /* * Copy within the same file */ /* copy the opened dataset to another location in SRC file */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_src, "NEW_DATASET_SIMPLE", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_src, "NEW_DATASET_CHUNKED", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied dataset */ if ((did3 = H5Dopen2(fid_src, "NEW_DATASET_SIMPLE", H5P_DEFAULT)) < 0) TEST_ERROR; if ((did4 = H5Dopen2(fid_src, "NEW_DATASET_CHUNKED", H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did3, H5P_DEFAULT, newbuf) != true) TEST_ERROR; if (compare_datasets(did2, did4, H5P_DEFAULT, newbuf) != true) TEST_ERROR; /* close the copied dataset in SRC file */ if (H5Dclose(did3) < 0) TEST_ERROR; if (H5Dclose(did4) < 0) TEST_ERROR; /* * Copy to another file */ /* copy the opened dataset from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, "NEW_DATASET_SIMPLE", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; if (H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, "NEW_DATASET_CHUNKED", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied dataset in DST file */ if ((did3 = H5Dopen2(fid_dst, "NEW_DATASET_SIMPLE", H5P_DEFAULT)) < 0) TEST_ERROR; if ((did4 = H5Dopen2(fid_dst, "NEW_DATASET_CHUNKED", H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did3, H5P_DEFAULT, newbuf) != true) TEST_ERROR; if (compare_datasets(did2, did4, H5P_DEFAULT, newbuf) != true) TEST_ERROR; /* close the copied dataset in DST file */ if (H5Dclose(did3) < 0) TEST_ERROR; if (H5Dclose(did4) < 0) TEST_ERROR; /* close the dataset at SRC file */ if (H5Dclose(did) < 0) TEST_ERROR; if (H5Dclose(did2) < 0) TEST_ERROR; /* * Test case 3 */ /* make a copy of the datatype */ if ((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR; /* commit the datatype */ if ((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* close the datatype */ if (H5Tclose(tid) < 0) TEST_ERROR; /* open the committed datatype */ tid = H5Topen2(fid_src, NAME_DATATYPE_SIMPLE, H5P_DEFAULT); /* create 2D dataset with the opened committed datatype in SRC file */ if ((did = H5Dcreate2(fid_src, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to the dataset */ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* * Copy within the same file */ /* copy the opened dataset (with the opened committed datatype) to another location in SRC file */ if (H5Ocopy(fid_src, NAME_DATASET_NAMED_DTYPE, fid_src, NAME_DATASET_NAMED_DTYPE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied dataset */ if ((did2 = H5Dopen2(fid_src, NAME_DATASET_NAMED_DTYPE2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the copied dataset in SRC file */ if (H5Dclose(did2) < 0) TEST_ERROR; /* * Copy to another file */ /* copy the opened dataset (with the opened committed datatype) from SRC to DST */ if (H5Ocopy(fid_src, NAME_DATASET_NAMED_DTYPE, fid_dst, NAME_DATASET_NAMED_DTYPE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied dataset in DST file */ if ((did2 = H5Dopen2(fid_dst, NAME_DATASET_NAMED_DTYPE2, H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the datasets are equal */ if (compare_datasets(did, did2, H5P_DEFAULT, buf) != true) TEST_ERROR; /* close the copied dataset in DST file */ if (H5Dclose(did2) < 0) TEST_ERROR; /* close the dataset at SRC file */ if (H5Dclose(did) < 0) TEST_ERROR; /* close the committed datatype at SRC file */ if (H5Tclose(tid) < 0) TEST_ERROR; /* * Test case 4 */ /* create a group in SRC file */ if ((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* attach attributes to the group */ if (test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR; /* create 2D int dataset in the group at SRC file */ if ((did = H5Dcreate2(gid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR; /* write data to the dataset */ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR; /* * Copy within the same file */ /* copy the opened group (together with opened dataset) to another location in SRC file */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_src, "COPIED_GROUP", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied group at SRC */ if ((gid2 = H5Gopen2(fid_src, "COPIED_GROUP", H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the DST dataset */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* * Copy to another file */ /* copy the opened group (together with opened dataset) to DST file */ if (H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, "COPIED_GROUP", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR; /* open the copied group at DST */ if ((gid2 = H5Gopen2(fid_dst, "COPIED_GROUP", H5P_DEFAULT)) < 0) TEST_ERROR; /* Check if the groups are equal */ if (compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != true) TEST_ERROR; /* close the group in DST file */ if (H5Gclose(gid2) < 0) TEST_ERROR; /* close the group in SRC file */ if (H5Gclose(gid) < 0) TEST_ERROR; /* close the dataset in SRC file */ if (H5Dclose(did) < 0) TEST_ERROR; /* close dataspace */ if (H5Sclose(sid) < 0) TEST_ERROR; /* close the SRC file */ if (H5Fclose(fid_src) < 0) TEST_ERROR; /* close the DST file */ if (H5Fclose(fid_dst) < 0) TEST_ERROR; PASSED(); return 0; error: H5E_BEGIN_TRY { H5Dclose(did); H5Dclose(did2); H5Sclose(sid); H5Gclose(gid); H5Gclose(gid2); H5Fclose(fid_dst); H5Fclose(fid_src); } H5E_END_TRY return 1; } /* end test_copy_dataset_open */ /*------------------------------------------------------------------------- * Function: main * * Purpose: Test H5Ocopy() * * Tests a number of cases: messages can be stored in the * new or old format, messages can be shared in either, * both, or neither of the source and destination files. * * Return: EXIT_SUCCESS/EXIT_FAILURE * *------------------------------------------------------------------------- */ int main(void) { int nerrors = 0; hid_t fapl, fapl2; hid_t fcpl_shared, ocpl; unsigned max_compact, min_dense; int configuration; /* Configuration of tests. */ int ExpressMode; const char *env_h5_drvr; /* File Driver value from environment */ bool same_file; /* Whether to run tests that only use one file */ bool driver_is_default_compatible; env_h5_drvr = getenv(HDF5_DRIVER); if (env_h5_drvr == NULL) env_h5_drvr = "nomatch"; /* Setup */ h5_reset(); fapl = h5_fileaccess(); if (h5_driver_is_default_vfd_compatible(fapl, &driver_is_default_compatible) < 0) TEST_ERROR; ExpressMode = GetTestExpress(); if (ExpressMode > 1) printf("***Express test mode on. Some tests may be skipped\n"); /* Copy the file access property list */ if ((fapl2 = H5Pcopy(fapl)) < 0) TEST_ERROR; /* Set the "use the latest version of the format" bounds for creating objects in the file */ if (H5Pset_libver_bounds(fapl2, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) TEST_ERROR; /* Create an FCPL with sharing enabled */ if ((fcpl_shared = H5Pcreate(H5P_FILE_CREATE)) < 0) TEST_ERROR; if (H5Pset_shared_mesg_nindexes(fcpl_shared, 1) < 0) TEST_ERROR; if (H5Pset_shared_mesg_index(fcpl_shared, 0, H5O_SHMESG_ALL_FLAG, 10) < 0) TEST_ERROR; /* Obtain the default attribute storage phase change values */ if ((ocpl = H5Pcreate(H5P_OBJECT_CREATE)) < 0) TEST_ERROR; if (H5Pget_attr_phase_change(ocpl, &max_compact, &min_dense) < 0) TEST_ERROR; if (H5Pclose(ocpl) < 0) TEST_ERROR; /* Test in all configurations */ for (configuration = 0; configuration <= MAX_CONFIGURATION; configuration++) { hid_t src_fapl; hid_t dst_fapl; hid_t fcpl_src; hid_t fcpl_dst; /* Start with same_file == true. Use source file settings for these * tests. Don't run with a non-default destination file setting, as * destination settings have no effect. */ same_file = true; /* No need to test dense attributes with old format */ if (!(configuration & CONFIG_SRC_NEW_FORMAT) && (configuration & CONFIG_DENSE)) continue; /* Test with and without shared messages */ if (configuration & CONFIG_SHARE_SRC) { puts("\nTesting with shared src messages:"); fcpl_src = fcpl_shared; } else { puts("\nTesting without shared src messages:"); fcpl_src = H5P_DEFAULT; } if (configuration & CONFIG_SHARE_DST) { puts("Testing with shared dst messages:"); fcpl_dst = fcpl_shared; same_file = false; } else { puts("Testing without shared dst messages:"); fcpl_dst = H5P_DEFAULT; } /* Set the FAPL for the source file's type of format */ if (configuration & CONFIG_SRC_NEW_FORMAT) { puts("Testing with latest format for source file:"); src_fapl = fapl2; /* Test with and without dense attributes */ if (configuration & CONFIG_DENSE) { puts("Testing with dense attributes:"); num_attributes_g = max_compact + 1; } else { puts("Testing without dense attributes:"); num_attributes_g = MAX(min_dense, 2) - 2; } } /* end if */ else { puts("Testing with oldest file format for source file:"); src_fapl = fapl; num_attributes_g = 4; } /* end else */ /* Set the FAPL for the destination file's type of format */ if (configuration & CONFIG_DST_NEW_FORMAT) { puts("Testing with latest format for destination file:"); dst_fapl = fapl2; same_file = false; } /* end if */ else { puts("Testing with oldest file format for destination file:"); dst_fapl = fapl; } /* end else */ /* The tests... */ nerrors += test_copy_dataset_simple(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_versionbounds(fcpl_src, src_fapl); nerrors += test_copy_dataset_simple_samefile(fcpl_src, src_fapl); /* Test with dataset opened in the file or not */ nerrors += test_copy_dataset_simple_empty(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_simple_empty(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_dataset_compound(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_chunked(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_chunked_empty(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_chunked_sparse(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_compressed(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Test with dataset opened in the file or not */ nerrors += test_copy_dataset_no_edge_filt(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_no_edge_filt(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); /* Test with dataset opened in the file or not */ nerrors += test_copy_dataset_compact(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_compact(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_dataset_multi_ohdr_chunks(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_multi_ohdr_chunks(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_dataset_attr_named_dtype(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_group_empty(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_root_group(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_group(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_group_deep(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_group_loop(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_group_wide_loop(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_group_links(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Test with dataset opened in the file or not */ nerrors += test_copy_soft_link(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_soft_link(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_ext_link(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_exist(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_path(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_named_datatype_attr_self(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_attr_crt_order(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_WITHOUT_ATTR_FLAG, false, "H5Ocopy(): without attributes"); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, 0, true, "H5Ocopy(): with missing groups"); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_EXPAND_SOFT_LINK_FLAG, false, "H5Ocopy(): expand soft link"); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_EXPAND_EXT_LINK_FLAG, false, "H5Ocopy(): expand external link"); /* Splitter VFD currently has external link-related bugs */ if (strcmp(env_h5_drvr, "splitter")) { nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_EXPAND_SOFT_LINK_FLAG | H5O_COPY_EXPAND_EXT_LINK_FLAG, false, "H5Ocopy(): expand soft and external links"); } nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_SHALLOW_HIERARCHY_FLAG, false, "H5Ocopy(): shallow group copy"); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_EXPAND_REFERENCE_FLAG, false, "H5Ocopy(): expand object reference"); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_PRESERVE_NULL_FLAG, false, "H5Ocopy(): preserve NULL messages"); nerrors += test_copy_option(fcpl_src, fcpl_dst, src_fapl, dst_fapl, H5O_COPY_WITHOUT_ATTR_FLAG | H5O_COPY_PRESERVE_NULL_FLAG, true, "H5Ocopy(): preserve NULL messages"); nerrors += test_copy_dataset_open(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Tests that do not use attributes and do not need to be tested * multiple times for different attribute configurations */ if (configuration < CONFIG_DENSE) { unsigned reopen; nerrors += test_copy_named_datatype(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_named_datatype_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_named_datatype_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Loop over reopening the file */ for (reopen = false; reopen <= true; reopen++) { nerrors += test_copy_committed_datatype_merge(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); if (same_file) nerrors += test_copy_committed_datatype_merge_same_file(fcpl_src, src_fapl, reopen); nerrors += test_copy_committed_dt_merge_sugg(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_committed_dt_merge_attr(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); /* tests added for merging committed datatypes + suggestions + callback */ nerrors += test_copy_cdt_hier_merge(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_cdt_merge_cdt(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_cdt_merge_suggs(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_cdt_merge_dset_suggs(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_cdt_merge_all_suggs(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_set_mcdt_search_cb(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); nerrors += test_copy_set_get_mcdt_search_cb(fcpl_src, fcpl_dst, src_fapl, dst_fapl, reopen); } /* end for */ nerrors += test_copy_dataset_external(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_named_dtype(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_named_dtype_hier(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_named_dtype_hier_outside(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_contig_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_chunked_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_compact_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_compressed_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_attribute_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_attribute_compound_vlstr(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_compact_named_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_contig_named_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Test with dataset opened in the file or not */ nerrors += test_copy_dataset_chunked_named_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_chunked_named_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_dataset_compressed_named_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_compact_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Test with dataset opened in the file or not */ nerrors += test_copy_dataset_contig_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_contig_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_dataset_chunked_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); /* Test with dataset opened in the file or not */ nerrors += test_copy_dataset_compressed_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl, false); nerrors += test_copy_dataset_compressed_vl_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl, true); nerrors += test_copy_dataset_contig_cmpd_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_chunked_cmpd_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_dataset_compact_cmpd_vl(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_same_file_named_datatype(fcpl_src, src_fapl); if (driver_is_default_compatible) { /* Test with dataset opened in the file or not */ nerrors += test_copy_old_layout(fcpl_dst, dst_fapl, false); nerrors += test_copy_old_layout(fcpl_dst, dst_fapl, true); } /* Test with dataset opened in the file or not */ nerrors += test_copy_null_ref(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_null_ref_open(fcpl_src, fcpl_dst, src_fapl, dst_fapl); nerrors += test_copy_cdt_v1_header_bug(fcpl_src, src_fapl); nerrors += test_copy_iterate(fcpl_src, fcpl_dst, src_fapl, dst_fapl); } /* end if */ /* TODO: not implemented nerrors += test_copy_mount(src_fapl); */ } /* end for */ /* Reset file token checking info */ token_reset(); /* Verify symbol table messages are cached */ nerrors += (h5_verify_cached_stabs(FILENAME, fapl) < 0 ? 1 : 0); /* Results */ if (nerrors) { printf("***** %d OBJECT COPY TEST%s FAILED! *****\n", nerrors, (1 == nerrors ? "" : "S")); exit(EXIT_FAILURE); } /* end if */ puts("All object copying tests passed."); /* close property list. * NOTE: if this property list is not closed and the test is * run with the split or multi driver, an interesting * problem is exposed in the property list shutdown code. * * Namely, since the split/multi driver copies property * lists for internal use, there's a (high) chance that * leaving the FAPL open and having the library's shutdown * code close it will cause the underlying property lists * to be cleaned up first, causing the actual property list * close operation to fail (since it won't be able to close * the already closed underlying property list). * * The could be addressed by converting the split/multi to * use non-public API routines, or putting some way into the * public H5I routines to indicate ordering at shutdown. * * For now, we just make certain to close the property list. * (QAK - 2016/04/06) * */ H5Pclose(fapl2); h5_cleanup(FILENAME, fapl); exit(EXIT_SUCCESS); error: exit(EXIT_FAILURE); } /* main */