#include "testphdf5.h" #define DIM 2 #define SIZE 32 void multiple_dset_write(char *filename, int ndatasets) { int i, j, n, mpi_size, mpi_rank; hid_t iof, plist, dataset, memspace, filespace; hssize_t chunk_origin [DIM]; hsize_t chunk_dims [DIM], file_dims [DIM]; hsize_t count[DIM]={1,1}; double outme [SIZE][SIZE]; char dname [100]; MPI_Comm_rank (MPI_COMM_WORLD, &mpi_rank); MPI_Comm_size (MPI_COMM_WORLD, &mpi_size); VRFY((mpi_size <= SIZE), "mpi_size <= SIZE"); chunk_origin [0] = mpi_rank * (SIZE / mpi_size); chunk_origin [1] = 0; chunk_dims [0] = SIZE / mpi_size; chunk_dims [1] = SIZE; for (i = 0; i < DIM; i++) file_dims [i] = SIZE; plist = H5Pcreate (H5P_FILE_ACCESS); H5Pset_fapl_mpio(plist, MPI_COMM_WORLD, MPI_INFO_NULL); iof = H5Fcreate (filename, H5F_ACC_TRUNC, H5P_DEFAULT, plist); H5Pclose (plist); memspace = H5Screate_simple (DIM, chunk_dims, NULL); filespace = H5Screate_simple (DIM, file_dims, NULL); H5Sselect_hyperslab (filespace, H5S_SELECT_SET, chunk_origin, chunk_dims, count, chunk_dims); for (n = 0; n < ndatasets; n++) { sprintf (dname, "dataset %d", n); dataset = H5Dcreate (iof, dname, H5T_NATIVE_DOUBLE, filespace, H5P_DEFAULT); VRFY((dataset > 0), dname); /* calculate data to write */ for (i = 0; i < SIZE; i++) for (j = 0; j < SIZE; j++) outme [i][j] = n*1000 + mpi_rank; H5Dwrite (dataset, H5T_NATIVE_DOUBLE, memspace, filespace, H5P_DEFAULT, outme); H5Dclose (dataset); if (! ((n+1) % 10)) { printf("created %d datasets\n", n+1); MPI_Barrier(MPI_COMM_WORLD); } } H5Sclose (filespace); H5Sclose (memspace); H5Fclose (iof); }