/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * Generate the binary hdf5 file for the h5copy tests */ #include #include "hdf5.h" #define FILENAME "h5copytst.h5" #define DATASET_SIMPLE "simple" #define DATASET_CHUNK "chunk" #define DATASET_COMPACT "compact" #define DATASET_COMPOUND "compound" #define DATASET_COMPRESSED "compressed" #define DATASET_NAMED_VL "named_vl" #define DATASET_NESTED_VL "nested_vl" #define GROUP_EMPTY "grp_empty" #define GROUP_DATASETS "grp_dsets" #define GROUP_NESTED "grp_nested" /*------------------------------------------------------------------------- * Function: gent_simple * * Purpose: Generate a simple dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_simple(hid_t loc_id) { hid_t sid, did; hsize_t dims[1] = {6}; int buf[6] = {1,2,3,4,5,6}; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create dataset */ did = H5Dcreate2(loc_id, DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* write */ H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Sclose(sid); H5Dclose(did); } /*------------------------------------------------------------------------- * Function: gent_chunked * * Purpose: Generate a chunked dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_chunked(hid_t loc_id) { hid_t sid, did, pid; hsize_t dims[1] = {6}; hsize_t chunk_dims[1] = {2}; int buf[6] = {1,2,3,4,5,6}; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create property plist */ pid = H5Pcreate(H5P_DATASET_CREATE); H5Pset_chunk(pid, 1, chunk_dims); /* create dataset */ did = H5Dcreate2(loc_id, DATASET_CHUNK, H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT); /* write */ H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Sclose(sid); H5Dclose(did); H5Pclose(pid); } /*------------------------------------------------------------------------- * Function: gent_compact * * Purpose: Generate a compact dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_compact(hid_t loc_id) { hid_t sid, did, pid; hsize_t dims[1] = {6}; int buf[6] = {1,2,3,4,5,6}; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create property plist */ pid = H5Pcreate(H5P_DATASET_CREATE); H5Pset_layout (pid,H5D_COMPACT); /* create dataset */ did = H5Dcreate2(loc_id, DATASET_COMPACT, H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT); /* write */ H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Sclose(sid); H5Dclose(did); H5Pclose(pid); } /*------------------------------------------------------------------------- * Function: gent_compound * * Purpose: Generate a compound dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_compound(hid_t loc_id) { typedef struct s_t { char str1[20]; char str2[20]; } s_t; hid_t sid, did, tid_c, tid_s; hsize_t dims[1] = {2}; s_t buf[2] = {{"str1", "str2"}, {"str3", "str4"}}; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create a compound type */ tid_c = H5Tcreate(H5T_COMPOUND, sizeof(s_t)); tid_s = H5Tcopy(H5T_C_S1); H5Tset_size(tid_s, 20); H5Tinsert(tid_c, "str1", HOFFSET(s_t,str1), tid_s); H5Tinsert(tid_c, "str2", HOFFSET(s_t,str2), tid_s); /* create dataset */ did = H5Dcreate2(loc_id, DATASET_COMPOUND, tid_c, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* write */ H5Dwrite(did, tid_c, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Sclose(sid); H5Dclose(did); H5Tclose(tid_c); H5Tclose(tid_s); } /*------------------------------------------------------------------------- * Function: gent_compressed * * Purpose: Generate a compressed dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_compressed(hid_t loc_id) { hid_t sid, did, pid; hsize_t dims[1] = {6}; hsize_t chunk_dims[1] = {2}; int buf[6] = {1,2,3,4,5,6}; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create property plist for chunk*/ pid = H5Pcreate(H5P_DATASET_CREATE); H5Pset_chunk(pid, 1, chunk_dims); /* set the deflate filter */ #if defined (H5_HAVE_FILTER_DEFLATE) H5Pset_deflate(pid, 1); #endif /* create dataset */ did = H5Dcreate2(loc_id, DATASET_COMPRESSED, H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT); /* write */ H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Sclose(sid); H5Dclose(did); H5Pclose(pid); } /*------------------------------------------------------------------------- * Function: gent_named_vl * * Purpose: Generate a variable lenght named datatype for a dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_named_vl(hid_t loc_id) { hid_t sid, did, tid; hsize_t dims[1] = {2}; hvl_t buf[2]; /* allocate and initialize VL dataset to write */ buf[0].len = 1; buf[0].p = malloc( 1 * sizeof(int)); ((int *)buf[0].p)[0]=1; buf[1].len = 2; buf[1].p = malloc( 2 * sizeof(int)); ((int *)buf[1].p)[0]=2; ((int *)buf[1].p)[1]=3; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create datatype */ tid = H5Tvlen_create(H5T_NATIVE_INT); /* create named datatype */ H5Tcommit2(loc_id, "vl", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* create dataset */ did = H5Dcreate2(loc_id, DATASET_NAMED_VL, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* write */ H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf); H5Sclose(sid); H5Dclose(did); H5Tclose(tid); } /*------------------------------------------------------------------------- * Function: gent_nested_vl * * Purpose: Generate a nested variable length dataset in LOC_ID * *------------------------------------------------------------------------- */ static void gent_nested_vl(hid_t loc_id) { hid_t sid, did, tid1, tid2; hsize_t dims[1] = {2}; hvl_t buf[2]; hvl_t *tvl; /* allocate and initialize VL dataset to write */ buf[0].len = 1; buf[0].p = malloc( 1 * sizeof(hvl_t)); tvl = buf[0].p; tvl->p = malloc( 1 * sizeof(int) ); tvl->len = 1; ((int *)tvl->p)[0]=1; buf[1].len = 1; buf[1].p = malloc( 1 * sizeof(hvl_t)); tvl = buf[1].p; tvl->p = malloc( 2 * sizeof(int) ); tvl->len = 2; ((int *)tvl->p)[0]=2; ((int *)tvl->p)[1]=3; /* create dataspace */ sid = H5Screate_simple(1, dims, NULL); /* create datatype */ tid1 = H5Tvlen_create(H5T_NATIVE_INT); /* create nested VL datatype */ tid2 = H5Tvlen_create(tid1); /* create dataset */ did = H5Dcreate2(loc_id, DATASET_NESTED_VL, tid2, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* write */ H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf); /* close */ H5Dvlen_reclaim(tid2,sid,H5P_DEFAULT,buf); H5Sclose(sid); H5Dclose(did); H5Tclose(tid1); H5Tclose(tid2); } /*------------------------------------------------------------------------- * Function: gent_datasets * * Purpose: Generate all datasets in a particular location * *------------------------------------------------------------------------- */ static void gent_datasets(hid_t loc_id) { gent_simple(loc_id); gent_chunked(loc_id); gent_compact(loc_id); gent_compound(loc_id); gent_compressed(loc_id); gent_named_vl(loc_id); gent_nested_vl(loc_id); } /*------------------------------------------------------------------------- * Function: gent_empty_group * * Purpose: Generate an empty group in a location * *------------------------------------------------------------------------- */ static void gent_empty_group(hid_t loc_id) { hid_t gid; /* Create group in location */ gid = H5Gcreate2(loc_id, GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* Release resources */ H5Gclose(gid); } /*------------------------------------------------------------------------- * Function: gent_nested_datasets * * Purpose: Generate a group in a location and populate it with the "standard" * datasets * *------------------------------------------------------------------------- */ static void gent_nested_datasets(hid_t loc_id) { hid_t gid; /* Create group in location */ gid = H5Gcreate2(loc_id, GROUP_DATASETS, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* Add datasets to group created */ gent_datasets(gid); /* Release resources */ H5Gclose(gid); } /*------------------------------------------------------------------------- * Function: gent_nested_group * * Purpose: Generate a group in a location and populate it with another group * containing the "standard" datasets * *------------------------------------------------------------------------- */ static void gent_nested_group(hid_t loc_id) { hid_t gid; /* Create group in location */ gid = H5Gcreate2(loc_id, GROUP_NESTED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* Add datasets to group created */ gent_nested_datasets(gid); /* Release resources */ H5Gclose(gid); } /*------------------------------------------------------------------------- * Function: main * *------------------------------------------------------------------------- */ int main(void) { hid_t fid; /* Create source file */ fid = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); gent_datasets(fid); gent_empty_group(fid); gent_nested_datasets(fid); gent_nested_group(fid); H5Fclose(fid); return 0; }