/* * Copyright (C) 1998 NCSA * All rights reserved. * * Programmer: Robb Matzke * Monday, March 23, 1998 */ /* * We include the private header file so we can get to the uniform * programming environment it declares. Other than that, h5ls only calls * HDF5 API functions. */ #include #include /* Command-line switches */ static int verbose_g = 0; /*lots of extra output */ static int width_g = 80; /*output width in characters */ static hbool_t dump_g = FALSE; /*display dataset values? */ static hbool_t label_g = FALSE; /*label compound values? */ static hbool_t string_g = FALSE; /*print 1-byte numbers as ASCII? */ /* Information about how to display each type of object */ static struct dispatch_t { const char *name; hid_t (*open)(hid_t loc, const char *name); herr_t (*close)(hid_t obj); herr_t (*list1)(hid_t obj); herr_t (*list2)(hid_t obj); } dispatch_g[H5G_NTYPES]; #define DISPATCH(TYPE,NAME,OPEN,CLOSE,LIST1,LIST2) { \ dispatch_g[TYPE].name = (NAME); \ dispatch_g[TYPE].open = (OPEN); \ dispatch_g[TYPE].close = (CLOSE); \ dispatch_g[TYPE].list1 = (LIST1); \ dispatch_g[TYPE].list2 = (LIST2); \ } static herr_t list (hid_t group, const char *name, void *cd); static void display_type(hid_t type, int indent); /*------------------------------------------------------------------------- * Function: usage * * Purpose: Prints a usage message on stderr and then returns. * * Return: void * * Programmer: Robb Matzke * Thursday, July 16, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void usage (const char *progname) { fprintf(stderr, "\ usage: %s [OPTIONS] FILE [OBJECTS...]\n\ OPTIONS\n\ -h, -?, --help Print a usage message and exit\n\ -d, --dump Print the values of datasets\n\ -l, --label Label members of compound datasets\n\ -s, --string Print 1-byte integer datasets as ASCII\n\ -wN, --width=N Set the number of columns of output\n\ -v, --verbose Generate more verbose output\n\ -V, --version Print version number and exit\n\ FILE\n\ The file name may include a printf(3C) integer format such as\n\ \"%%05d\" to open a file family.\n\ OBJECTS\n\ The names of zero or more objects about which information should be\n\ displayed. If a group is mentioned then information about each of its\n\ members is displayed. If no object names are specified then\n\ information about all of the objects in the root group is displayed.\n", progname); } /*------------------------------------------------------------------------- * Function: display_string * * Purpose: Print a string value by escaping unusual characters. * * Return: Number of characters printed. * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static int display_string(const char *s) { int nprint=0; for (/*void*/; s && *s; s++) { switch (*s) { case '"': printf("\\\""); nprint += 2; break; case '\\': printf("\\\\"); nprint += 2; break; case '\b': printf("\\b"); nprint += 2; break; case '\f': printf("\\f"); nprint += 2; break; case '\n': printf("\\n"); nprint += 2; break; case '\r': printf("\\r"); nprint += 2; break; case '\t': printf("\\t"); nprint += 2; break; default: if (isprint(*s)) { putchar(*s); nprint++; } else { printf("\\%03o", *((const unsigned char*)s)); nprint += 4; } break; } } return nprint; } /*------------------------------------------------------------------------- * Function: display_native_type * * Purpose: Prints the name of a native C data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed. * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_native_type(hid_t type, int __unused__ indent) { if (H5Tequal(type, H5T_NATIVE_SCHAR)) { printf("native signed char"); } else if (H5Tequal(type, H5T_NATIVE_UCHAR)) { printf("native unsigned char"); } else if (H5Tequal(type, H5T_NATIVE_INT)) { printf("native int"); } else if (H5Tequal(type, H5T_NATIVE_UINT)) { printf("native unsigned int"); } else if (H5Tequal(type, H5T_NATIVE_SHORT)) { printf("native short"); } else if (H5Tequal(type, H5T_NATIVE_USHORT)) { printf("native unsigned short"); } else if (H5Tequal(type, H5T_NATIVE_LONG)) { printf("native long"); } else if (H5Tequal(type, H5T_NATIVE_ULONG)) { printf("native unsigned long"); } else if (H5Tequal(type, H5T_NATIVE_LLONG)) { printf("native long long"); } else if (H5Tequal(type, H5T_NATIVE_ULLONG)) { printf("native unsigned long long"); } else if (H5Tequal(type, H5T_NATIVE_FLOAT)) { printf("native float"); } else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) { printf("native double"); } else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) { printf("native long double"); } else if (H5Tequal(type, H5T_NATIVE_B8)) { printf("native 8-bit field"); } else if (H5Tequal(type, H5T_NATIVE_B16)) { printf("native 16-bit field"); } else if (H5Tequal(type, H5T_NATIVE_B32)) { printf("native 32-bit field"); } else if (H5Tequal(type, H5T_NATIVE_B64)) { printf("native 64-bit field"); } else if (H5Tequal(type, H5T_NATIVE_HSIZE)) { printf("native hsize_t"); } else if (H5Tequal(type, H5T_NATIVE_HSSIZE)) { printf("native hssize_t"); } else if (H5Tequal(type, H5T_NATIVE_HERR)) { printf("native herr_t"); } else if (H5Tequal(type, H5T_NATIVE_HBOOL)) { printf("native hbool_t"); } else { return FALSE; } return TRUE; } /*------------------------------------------------------------------------- * Function: display_ieee_type * * Purpose: Print the name of an IEEE floating-point data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_ieee_type(hid_t type, int __unused__ indent) { if (H5Tequal(type, H5T_IEEE_F32BE)) { printf("IEEE 32-bit big-endian float"); } else if (H5Tequal(type, H5T_IEEE_F32LE)) { printf("IEEE 32-bit little-endian float"); } else if (H5Tequal(type, H5T_IEEE_F64BE)) { printf("IEEE 64-bit big-endian float"); } else if (H5Tequal(type, H5T_IEEE_F64LE)) { printf("IEEE 64-bit little-endian float"); } else { return FALSE; } return TRUE; } /*------------------------------------------------------------------------- * Function: display_precision * * Purpose: Prints information on the next line about precision and * padding if the precision is less than the total data type * size. * * Return: void * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void display_precision(hid_t type, int indent) { size_t prec; /*precision */ H5T_pad_t plsb, pmsb; /*lsb and msb padding */ const char *plsb_s=NULL; /*lsb padding string */ const char *pmsb_s=NULL; /*msb padding string */ size_t nbits; /*number of bits */ /* * If the precision is less than the total size then show the precision * and offset on the following line. Also display the padding * information. */ if (8*H5Tget_size(type)!=(prec=H5Tget_precision(type))) { printf("\n%*s(%lu bit%s of precision beginning at bit %lu)", indent, "", (unsigned long)prec, 1==prec?"":"s", (unsigned long)H5Tget_offset(type)); H5Tget_pad(type, &plsb, &pmsb); if (H5Tget_offset(type)>0) { switch (plsb) { case H5T_PAD_ZERO: plsb_s = "zero"; break; case H5T_PAD_ONE: plsb_s = "one"; break; case H5T_PAD_BACKGROUND: plsb_s = "bkg"; break; case H5T_PAD_ERROR: case H5T_NPAD: plsb_s = "unknown"; break; } } if (H5Tget_offset(type)+prec<8*H5Tget_size(type)) { switch (pmsb) { case H5T_PAD_ZERO: pmsb_s = "zero"; break; case H5T_PAD_ONE: pmsb_s = "one"; break; case H5T_PAD_BACKGROUND: pmsb_s = "bkg"; break; case H5T_PAD_ERROR: case H5T_NPAD: pmsb_s = "unknown"; break; } } if (plsb_s || pmsb_s) { printf("\n%*s(", indent, ""); if (plsb_s) { nbits = H5Tget_offset(type); printf("%lu %s bit%s at bit 0", (unsigned long)nbits, plsb_s, 1==nbits?"":"s"); } if (plsb_s && pmsb_s) printf(", "); if (pmsb_s) { nbits = 8*H5Tget_size(type)-(H5Tget_offset(type)+prec); printf("%lu %s bit%s at bit %lu", (unsigned long)nbits, pmsb_s, 1==nbits?"":"s", (unsigned long)(8*H5Tget_size(type)-nbits)); } printf(")"); } } } /*------------------------------------------------------------------------- * Function: display_int_type * * Purpose: Print the name of an integer data type. Common information * like number of bits, byte order, and sign scheme appear on * the first line. Additional information might appear in * parentheses on the following lines. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_int_type(hid_t type, int indent) { H5T_order_t order; /*byte order value */ const char *order_s=NULL; /*byte order string */ H5T_sign_t sign; /*sign scheme value */ const char *sign_s=NULL; /*sign scheme string */ if (H5T_INTEGER!=H5Tget_class(type)) return FALSE; /* Byte order */ if (H5Tget_size(type)>1) { order = H5Tget_order(type); if (H5T_ORDER_LE==order) { order_s = " little-endian"; } else if (H5T_ORDER_BE==order) { order_s = " big-endian"; } else if (H5T_ORDER_VAX==order) { order_s = " mixed-endian"; } else { order_s = " unknown-byte-order"; } } else { order_s = ""; } /* Sign */ if (H5T_SGN_NONE==sign) { sign_s = " unsigned"; } else if (H5T_SGN_2==sign) { sign_s = ""; } else { sign_s = " unknown-sign"; } /* * Print size, order, and sign on first line, precision and padding * information on the subsequent lines */ printf("%lu-bit%s%s integer", (unsigned long)(8*H5Tget_size(type)), order_s, sign_s); display_precision(type, indent); return TRUE; } /*------------------------------------------------------------------------- * Function: display_float_type * * Purpose: Print info about a floating point data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_float_type(hid_t type, int indent) { H5T_order_t order; /*byte order value */ const char *order_s=NULL; /*byte order string */ size_t spos; /*sign bit position */ size_t esize, epos; /*exponent size and position */ size_t msize, mpos; /*significand size and position */ size_t ebias; /*exponent bias */ H5T_norm_t norm; /*significand normalization */ const char *norm_s=NULL; /*normalization string */ H5T_pad_t pad; /*internal padding value */ const char *pad_s=NULL; /*internal padding string */ if (H5T_FLOAT!=H5Tget_class(type)) return FALSE; /* Byte order */ if (H5Tget_size(type)>1) { order = H5Tget_order(type); if (H5T_ORDER_LE==order) { order_s = " little-endian"; } else if (H5T_ORDER_BE==order) { order_s = " big-endian"; } else if (H5T_ORDER_VAX==order) { order_s = " mixed-endian"; } else { order_s = " unknown-byte-order"; } } else { order_s = ""; } /* * Print size and byte order on first line, precision and padding on * subsequent lines. */ printf("%lu-bit%s floating-point", (unsigned long)(8*H5Tget_size(type)), order_s); display_precision(type, indent); /* Print sizes, locations, and other information about each field */ H5Tget_fields (type, &spos, &epos, &esize, &mpos, &msize); ebias = H5Tget_ebias(type); norm = H5Tget_norm(type); switch (norm) { case H5T_NORM_IMPLIED: norm_s = ", msb implied"; break; case H5T_NORM_MSBSET: norm_s = ", msb always set"; break; case H5T_NORM_NONE: norm_s = ", no normalization"; break; case H5T_NORM_ERROR: norm_s = ", unknown normalization"; break; } printf("\n%*s(significant for %lu bit%s at bit %lu%s)", indent, "", (unsigned long)msize, 1==msize?"":"s", (unsigned long)mpos, norm_s); printf("\n%*s(exponent for %lu bit%s at bit %lu, bias is 0x%lx)", indent, "", (unsigned long)esize, 1==esize?"":"s", (unsigned long)epos, (unsigned long)ebias); printf("\n%*s(sign bit at %lu)", indent, "", (unsigned long)spos); return TRUE; /* Display internal padding */ if (1+esize+msize0) { printf("["); for (j=0; j"); return; } /* Shared? */ if (H5Tcommitted(type)) printf("shared "); /* Print the type */ if (display_native_type(type, indent) || display_ieee_type(type, indent) || display_int_type(type, indent) || display_float_type(type, indent) || display_cmpd_type(type, indent) || display_string_type(type, indent) || display_reference_type(type, indent)) { return; } /* Unknown type */ printf("%lu-byte class-%u unknown", (unsigned long)H5Tget_size(type), (unsigned)data_class); } /*------------------------------------------------------------------------- * Function: dump_dataset_values * * Purpose: Prints all values of a dataset. * * Return: void * * Programmer: Robb Matzke * Tuesday, July 21, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void dump_dataset_values(hid_t dset) { hid_t f_type = H5Dget_type(dset); size_t size = H5Tget_size(f_type); h5dump_t info; /* Set to all default values and then override */ memset(&info, 0, sizeof info); info.idx_fmt = " (%s) "; info.line_ncols = width_g; if (label_g) info.cmpd_name = "%s="; /* * If the dataset is a 1-byte integer type then format it as an ASCI * character string instead of integers if the `-s' or `--string' * command-line option was given. */ if (string_g && 1==size && H5T_INTEGER==H5Tget_class(f_type)) { info.ascii = TRUE; info.elmt_suf1 = ""; info.elmt_suf2 = ""; info.idx_fmt = " (%s) \""; info.line_suf = "\""; } /* * Print all the values. */ printf(" Data:\n"); if (h5dump(stdout, &info, dset, -1)<0) { printf(" Unable to print data.\n"); } H5Tclose(f_type); } /*------------------------------------------------------------------------- * Function: list_attr * * Purpose: Prints information about attributes. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Friday, June 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t list_attr (hid_t obj, const char *attr_name, void __unused__ *op_data) { hid_t attr; int i; printf(" %-10s %-10s", "Attribute:", attr_name); if ((attr = H5Aopen_name (obj, attr_name))) { hid_t space = H5Aget_space (attr); hsize_t size[64]; int ndims = H5Sget_simple_extent_dims (space, size, NULL); H5Sclose (space); printf (" {"); for (i=0; i0) { HDfprintf(stdout, "/%Hu", max_size[i]); } } if (0==ndims) printf("SCALAR"); putchar('}'); H5Sclose (space); return 0; } /*------------------------------------------------------------------------- * Function: dataset_list2 * * Purpose: List information about a dataset which should appear after * information which is general to all objects. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Thursday, August 27, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t dataset_list2(hid_t dset) { hid_t dcpl; /*dataset creation property list*/ hid_t type; /*data type of dataset */ hid_t space; /*data space of dataset */ int nf; /*number of filters */ unsigned filt_flags; /*filter flags */ H5Z_filter_t filt_id; /*filter identification number */ unsigned cd_values[20]; /*filter client data values */ size_t cd_nelmts; /*filter client number of values*/ size_t cd_num; /*filter client data counter */ char f_name[256]; /*filter/file name */ char s[64]; /*temporary string buffer */ off_t f_offset; /*offset in external file */ hsize_t f_size; /*bytes used in external file */ hsize_t total; /*total size or offset */ hsize_t chsize[64]; /*chunk size in elements */ int ndims; /*dimensionality */ int i; if (verbose_g>0) { dcpl = H5Dget_create_plist(dset); space = H5Dget_space(dset); type = H5Dget_type(dset); /* Print information about chunked storage */ if (H5D_CHUNKED==H5Pget_layout(dcpl)) { ndims = H5Pget_chunk(dcpl, NELMTS(chsize), chsize/*out*/); printf(" %-10s {", "Chunks:"); total = H5Tget_size(type); for (i=0; i0) { printf(" %-10s %d external file%s (num/addr/offset/length)\n", "Extern:", nf, 1==nf?"":"s"); for (i=0, total=0; i0) { for (i=0; i=H5G_NTYPES) { printf("Unknown type(%d)", sb.type); sb.type = -1; } if (sb.type>=0 && dispatch_g[sb.type].name) { fputs(dispatch_g[sb.type].name, stdout); } /* * Open the object. Not all objects can be opened. If this is the case * then return right away. */ if (sb.type>=0 && (NULL==dispatch_g[sb.type].open || (obj=(dispatch_g[sb.type].open)(group, name))<0)) return 0; /* * List the first line of information for the object. */ if (sb.type>=0 && dispatch_g[sb.type].list1) { (dispatch_g[sb.type].list1)(obj); } putchar('\n'); /* * Show detailed information about the object, beginning with information * which is common to all objects. */ if (verbose_g>0) { if (sb.type>=0) H5Aiterate(obj, NULL, list_attr, NULL); printf(" %-10s %lu:%lu:%lu:%lu\n", "Location:", sb.fileno[1], sb.fileno[0], sb.objno[1], sb.objno[0]); printf(" %-10s %u\n", "Links:", sb.nlink); if (sb.mtime>0 && NULL!=(tm=localtime(&(sb.mtime)))) { strftime(buf, sizeof(buf), "%Y-%m-%d %H:%M:%S %Z", tm); printf(" %-10s %s\n", "Modified:", buf); } comment[0] = '\0'; H5Gget_comment(group, name, sizeof(comment), comment); strcpy(comment+sizeof(comment)-4, "..."); if (comment[0]) printf(" %-10s %s\n", "Comment:", comment); } if (sb.type>0 && dispatch_g[sb.type].list2) { (dispatch_g[sb.type].list2)(obj); } /* * Close the object. */ if (sb.type>0) (dispatch_g[sb.type].close)(obj); return 0; } /*------------------------------------------------------------------------- * Function: get_width * * Purpose: Figure out how wide the screen is. This is highly * unportable, but the user can always override the width we * detect by giving a command-line option. These code snippets * were borrowed from the GNU less(1). * * Return: Success: Number of columns. * * Failure: Some default number of columms. * * Programmer: Robb Matzke * Friday, November 6, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static int get_width(void) { int width = 80; /*the default */ char *s; /* * Try to get it from the COLUMNS environment variable first since it's * value is sometimes wrong. */ if ((s=getenv("COLUMNS")) && *s && isdigit(*s)) { width = strtol(s, NULL, 0); } #if defined(HAVE_STRUCT_VIDEOCONFIG) && defined(HAVE__GETVIDEOCONFIG) { /* Microsoft C */ struct videoconfig w; _getvideoconfig(&w); width = w.numtextcols; } #elif defined(HAVE_STRUCT_TEXT_INFO) && defined(HAVE_GETTEXTINFO) { /* Borland C or DJGPPC */ struct text_info w; gettextinfo(&w); width = w.screenwidth; } #elif defined(HAVE_GETCONSOLESCREENBUFFERINFO) { /* Win32 C */ CONSOLE_SCREEN_BUFFER_INFO scr; GetConsoleScreenBufferInfo(con_out, &scr); width = scr.srWindow.Right - scr.srWindow.Left + 1; } #elif defined(HAVE__SCRSIZE) { /* OS/2 */ int w[2]; _scrsize(w); width = w[0]; } #elif defined(HAVE_TIOCGWINSZ) && defined(HAVE_IOCTL) { /* Unix with ioctl(TIOCGWINSZ) */ struct winsize w; if (ioctl(2, TIOCGWINSZ, &w)>=0 && w.ws_col>0) { width = w.ws_col; } } #elif defined(HAVE_TIOCGETD) && defined(HAVE_IOCTL) { /* Unix with ioctl(TIOCGETD) */ struct uwdata w; if (ioctl(2, WIOCGETD, &w)>=0 && w.uw_width>0) { width = w.uw_width / w.uw_hs; } } #endif /* Set to at least 1 */ if (width<1) width = 1; return width; } /*------------------------------------------------------------------------- * Function: main * * Purpose: Opens a file and lists the specified group * * Return: Success: 0 * * Failure: 1 * * Programmer: Robb Matzke * Monday, March 23, 1998 * * Modifications: * *------------------------------------------------------------------------- */ int main (int argc, char *argv[]) { hid_t file, plist=H5P_DEFAULT, root; const char *fname = NULL; const char *progname; const char *s; char *rest; int argno; H5G_stat_t sb; DISPATCH(H5G_DATASET, "Dataset", H5Dopen, H5Dclose, dataset_list1, dataset_list2); DISPATCH(H5G_GROUP, "Group", H5Gopen, H5Gclose, NULL, NULL); DISPATCH(H5G_TYPE, "Type", H5Topen, H5Tclose, NULL, datatype_list2); DISPATCH(H5G_LINK, "-> ", link_open, NULL, NULL, NULL); DISPATCH(H5G_RAGGED, "Ragged Array", H5Gopen, H5Gclose, NULL, ragged_list2); /* Name of this program without the path */ if ((progname=strrchr (argv[0], '/'))) progname++; else progname = argv[0]; /* Default output width */ width_g = get_width(); /* Switches come before non-switch arguments */ for (argno=1; argno=argc) { usage(progname); exit(1); } else { s = argv[++argno]; } width_g = strtol(s, &rest, 0); if (width_g<=0 || *rest) { usage(progname); exit(1); } } else if ('-'!=argv[argno][1]) { /* Single-letter switches */ for (s=argv[argno]+1; *s; s++) { switch (*s) { case '?': case 'h': /* --help */ usage(progname); exit(0); case 'd': /* --dump */ dump_g++; break; case 'l': /* --label */ label_g = TRUE; break; case 's': /* --string */ string_g = TRUE; break; case 'v': /* --verbose */ verbose_g++; break; case 'V': /* --version */ printf("This is %s version %u.%u release %u\n", progname, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE); exit(0); default: usage(progname); exit(1); } } } else { usage(progname); exit(1); } } /* * The first non-switch argument is a file name. If the file name * contains a `%' then assume that a file family is being opened. */ if (argno=argc) { H5Giterate(file, "/", NULL, list, NULL); } else { for (/*void*/; argno=0 && H5G_GROUP==sb.type) { H5Giterate(file, argv[argno], NULL, list, NULL); } else if ((root=H5Gopen(file, "/"))<0) { exit(1); } else { list(root, argv[argno], NULL); if (H5Gclose(root)<0) exit(1); } } } if (H5Fclose(file)<0) exit(1); return 0; }