/* * Copyright (C) 1998 NCSA * All rights reserved. * * Programmer: Robb Matzke * Monday, March 23, 1998 */ /* * We include the private header file so we can get to the uniform * programming environment it declares. Other than that, h5ls only calls * HDF5 API functions (except for H5G_basename()) */ #include #include /* Command-line switches */ static int verbose_g = 0; /*lots of extra output */ static int width_g = 80; /*output width in characters */ static hbool_t address_g = FALSE; /*print raw data addresses */ static hbool_t data_g = FALSE; /*display dataset values? */ static hbool_t label_g = FALSE; /*label compound values? */ static hbool_t string_g = FALSE; /*print 1-byte numbers as ASCII? */ static hbool_t fullname_g = FALSE; /*print full path names */ static hbool_t recursive_g = FALSE; /*recursive descent listing */ static hbool_t grp_literal_g = FALSE; /*list group, not contents */ static hbool_t hexdump_g = FALSE; /*show data as raw hexadecimal */ /* Info to pass to the iteration functions */ typedef struct iter_t { const char *container; /*full name of the container object */ } iter_t; /* Table containing object id and object name */ static struct { int nalloc; /*number of slots allocated */ int nobjs; /*number of objects */ struct { unsigned long id[2]; /*object number */ char *name; /*full object name */ } *obj; } idtab_g; /* Information about how to display each type of object */ static struct dispatch_t { const char *name; hid_t (*open)(hid_t loc, const char *name); herr_t (*close)(hid_t obj); herr_t (*list1)(hid_t obj); herr_t (*list2)(hid_t obj, const char *name); } dispatch_g[H5G_NTYPES]; #define DISPATCH(TYPE,NAME,OPEN,CLOSE,LIST1,LIST2) { \ dispatch_g[TYPE].name = (NAME); \ dispatch_g[TYPE].open = (OPEN); \ dispatch_g[TYPE].close = (CLOSE); \ dispatch_g[TYPE].list1 = (LIST1); \ dispatch_g[TYPE].list2 = (LIST2); \ } static herr_t list (hid_t group, const char *name, void *cd); static void display_type(hid_t type, int indent); static char *fix_name(const char *path, const char *base); /*------------------------------------------------------------------------- * Function: usage * * Purpose: Prints a usage message on stderr and then returns. * * Return: void * * Programmer: Robb Matzke * Thursday, July 16, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void usage (const char *progname) { fprintf(stderr, "\ usage: %s [OPTIONS] FILE [OBJECTS...]\n\ OPTIONS\n\ -h, -?, --help Print a usage message and exit\n\ -a, --address Print addresses for raw data\n\ -d, --data Print the values of datasets\n\ -f, --full Print full path names instead of base names\n\ -g, --group Show information about a group, not its contents\n\ -l, --label Label members of compound datasets\n\ -r, --recursive List all groups recursively, avoiding cycles\n\ -s, --string Print 1-byte integer datasets as ASCII\n\ -wN, --width=N Set the number of columns of output\n\ -v, --verbose Generate more verbose output\n\ -V, --version Print version number and exit\n\ -x, --hexdump Show raw data in hexadecimal format\n\ FILE\n\ The file name may include a printf(3C) integer format such as\n\ \"%%05d\" to open a file family.\n\ OBJECTS\n\ The names of zero or more objects about which information should be\n\ displayed. If a group is mentioned then information about each of its\n\ members is displayed. If no object names are specified then\n\ information about all of the objects in the root group is displayed.\n", progname); } /*------------------------------------------------------------------------- * Function: sym_insert * * Purpose: Add a symbol to the table. * * Return: void * * Programmer: Robb Matzke * Thursday, January 21, 1999 * * Modifications: * *------------------------------------------------------------------------- */ static void sym_insert(H5G_stat_t *sb, const char *name) { int n; /* * Don't add it if the link count is 1 because such an object can only * have one name. */ if (sb->nlink<2) return; /* Extend the table */ if (idtab_g.nobjs>=idtab_g.nalloc) { idtab_g.nalloc = MAX(256, 2*idtab_g.nalloc); idtab_g.obj = realloc(idtab_g.obj, idtab_g.nalloc*sizeof(idtab_g.obj[0])); } /* Insert the entry */ n = idtab_g.nobjs++; idtab_g.obj[n].id[0] = sb->objno[0]; idtab_g.obj[n].id[1] = sb->objno[1]; idtab_g.obj[n].name = malloc(strlen(name)+1); strcpy(idtab_g.obj[n].name, name); } /*------------------------------------------------------------------------- * Function: sym_lookup * * Purpose: Find another name for the specified object. * * Return: Success: Ptr to another name. * * Failure: NULL * * Programmer: Robb Matzke * Thursday, January 21, 1999 * * Modifications: * *------------------------------------------------------------------------- */ static char * sym_lookup(H5G_stat_t *sb) { int n; if (sb->nlink<2) return NULL; /*only one name possible*/ for (n=0; nobjno[0] && idtab_g.obj[n].id[1]==sb->objno[1]) { return idtab_g.obj[n].name; } } return NULL; } /*------------------------------------------------------------------------- * Function: display_string * * Purpose: Print a string value by escaping unusual characters. If * STREAM is null then we only count how large the output would * be. * * Return: Number of characters printed. * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static int display_string(FILE *stream, const char *s, hbool_t escape_spaces) { int nprint=0; for (/*void*/; s && *s; s++) { switch (*s) { case '"': if (stream) fprintf(stream, "\\\""); nprint += 2; break; case '\\': if (stream) fprintf(stream, "\\\\"); nprint += 2; break; case '\b': if (stream) fprintf(stream, "\\b"); nprint += 2; break; case '\f': if (stream) fprintf(stream, "\\f"); nprint += 2; break; case '\n': if (stream) fprintf(stream, "\\n"); nprint += 2; break; case '\r': if (stream) fprintf(stream, "\\r"); nprint += 2; break; case '\t': if (stream) fprintf(stream, "\\t"); nprint += 2; break; case ' ': if (escape_spaces) { if (stream) fprintf(stream, "\\ "); nprint += 2; } else { if (stream) fprintf(stream, " "); nprint++; } break; default: if (isprint(*s)) { if (stream) putc(*s, stream); nprint++; } else { if (stream) { fprintf(stream, "\\%03o", *((const unsigned char*)s)); } nprint += 4; } break; } } return nprint; } /*------------------------------------------------------------------------- * Function: display_native_type * * Purpose: Prints the name of a native C data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed. * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_native_type(hid_t type, int UNUSED indent) { if (H5Tequal(type, H5T_NATIVE_SCHAR)) { printf("native signed char"); } else if (H5Tequal(type, H5T_NATIVE_UCHAR)) { printf("native unsigned char"); } else if (H5Tequal(type, H5T_NATIVE_INT)) { printf("native int"); } else if (H5Tequal(type, H5T_NATIVE_UINT)) { printf("native unsigned int"); } else if (H5Tequal(type, H5T_NATIVE_SHORT)) { printf("native short"); } else if (H5Tequal(type, H5T_NATIVE_USHORT)) { printf("native unsigned short"); } else if (H5Tequal(type, H5T_NATIVE_LONG)) { printf("native long"); } else if (H5Tequal(type, H5T_NATIVE_ULONG)) { printf("native unsigned long"); } else if (H5Tequal(type, H5T_NATIVE_LLONG)) { printf("native long long"); } else if (H5Tequal(type, H5T_NATIVE_ULLONG)) { printf("native unsigned long long"); } else if (H5Tequal(type, H5T_NATIVE_FLOAT)) { printf("native float"); } else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) { printf("native double"); } else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) { printf("native long double"); } else if (H5Tequal(type, H5T_NATIVE_B8)) { printf("native 8-bit field"); } else if (H5Tequal(type, H5T_NATIVE_B16)) { printf("native 16-bit field"); } else if (H5Tequal(type, H5T_NATIVE_B32)) { printf("native 32-bit field"); } else if (H5Tequal(type, H5T_NATIVE_B64)) { printf("native 64-bit field"); } else if (H5Tequal(type, H5T_NATIVE_HSIZE)) { printf("native hsize_t"); } else if (H5Tequal(type, H5T_NATIVE_HSSIZE)) { printf("native hssize_t"); } else if (H5Tequal(type, H5T_NATIVE_HERR)) { printf("native herr_t"); } else if (H5Tequal(type, H5T_NATIVE_HBOOL)) { printf("native hbool_t"); } else { return FALSE; } return TRUE; } /*------------------------------------------------------------------------- * Function: display_ieee_type * * Purpose: Print the name of an IEEE floating-point data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_ieee_type(hid_t type, int UNUSED indent) { if (H5Tequal(type, H5T_IEEE_F32BE)) { printf("IEEE 32-bit big-endian float"); } else if (H5Tequal(type, H5T_IEEE_F32LE)) { printf("IEEE 32-bit little-endian float"); } else if (H5Tequal(type, H5T_IEEE_F64BE)) { printf("IEEE 64-bit big-endian float"); } else if (H5Tequal(type, H5T_IEEE_F64LE)) { printf("IEEE 64-bit little-endian float"); } else { return FALSE; } return TRUE; } /*------------------------------------------------------------------------- * Function: display_precision * * Purpose: Prints information on the next line about precision and * padding if the precision is less than the total data type * size. * * Return: void * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void display_precision(hid_t type, int indent) { size_t prec; /*precision */ H5T_pad_t plsb, pmsb; /*lsb and msb padding */ const char *plsb_s=NULL; /*lsb padding string */ const char *pmsb_s=NULL; /*msb padding string */ size_t nbits; /*number of bits */ /* * If the precision is less than the total size then show the precision * and offset on the following line. Also display the padding * information. */ if (8*H5Tget_size(type)!=(prec=H5Tget_precision(type))) { printf("\n%*s(%lu bit%s of precision beginning at bit %lu)", indent, "", (unsigned long)prec, 1==prec?"":"s", (unsigned long)H5Tget_offset(type)); H5Tget_pad(type, &plsb, &pmsb); if (H5Tget_offset(type)>0) { switch (plsb) { case H5T_PAD_ZERO: plsb_s = "zero"; break; case H5T_PAD_ONE: plsb_s = "one"; break; case H5T_PAD_BACKGROUND: plsb_s = "bkg"; break; case H5T_PAD_ERROR: case H5T_NPAD: plsb_s = "unknown"; break; } } if (H5Tget_offset(type)+prec<8*H5Tget_size(type)) { switch (pmsb) { case H5T_PAD_ZERO: pmsb_s = "zero"; break; case H5T_PAD_ONE: pmsb_s = "one"; break; case H5T_PAD_BACKGROUND: pmsb_s = "bkg"; break; case H5T_PAD_ERROR: case H5T_NPAD: pmsb_s = "unknown"; break; } } if (plsb_s || pmsb_s) { printf("\n%*s(", indent, ""); if (plsb_s) { nbits = H5Tget_offset(type); printf("%lu %s bit%s at bit 0", (unsigned long)nbits, plsb_s, 1==nbits?"":"s"); } if (plsb_s && pmsb_s) printf(", "); if (pmsb_s) { nbits = 8*H5Tget_size(type)-(H5Tget_offset(type)+prec); printf("%lu %s bit%s at bit %lu", (unsigned long)nbits, pmsb_s, 1==nbits?"":"s", (unsigned long)(8*H5Tget_size(type)-nbits)); } printf(")"); } } } /*------------------------------------------------------------------------- * Function: display_int_type * * Purpose: Print the name of an integer data type. Common information * like number of bits, byte order, and sign scheme appear on * the first line. Additional information might appear in * parentheses on the following lines. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_int_type(hid_t type, int indent) { H5T_order_t order; /*byte order value */ const char *order_s=NULL; /*byte order string */ H5T_sign_t sign; /*sign scheme value */ const char *sign_s=NULL; /*sign scheme string */ if (H5T_INTEGER!=H5Tget_class(type)) return FALSE; /* Byte order */ if (H5Tget_size(type)>1) { order = H5Tget_order(type); if (H5T_ORDER_LE==order) { order_s = " little-endian"; } else if (H5T_ORDER_BE==order) { order_s = " big-endian"; } else if (H5T_ORDER_VAX==order) { order_s = " mixed-endian"; } else { order_s = " unknown-byte-order"; } } else { order_s = ""; } /* Sign */ if ((sign=H5Tget_sign(type))>=0) { if (H5T_SGN_NONE==sign) { sign_s = " unsigned"; } else if (H5T_SGN_2==sign) { sign_s = ""; } else { sign_s = " unknown-sign"; } } else { sign_s = " unknown-sign"; } /* * Print size, order, and sign on first line, precision and padding * information on the subsequent lines */ printf("%lu-bit%s%s integer", (unsigned long)(8*H5Tget_size(type)), order_s, sign_s); display_precision(type, indent); return TRUE; } /*------------------------------------------------------------------------- * Function: display_float_type * * Purpose: Print info about a floating point data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_float_type(hid_t type, int indent) { H5T_order_t order; /*byte order value */ const char *order_s=NULL; /*byte order string */ size_t spos; /*sign bit position */ size_t esize, epos; /*exponent size and position */ size_t msize, mpos; /*significand size and position */ size_t ebias; /*exponent bias */ H5T_norm_t norm; /*significand normalization */ const char *norm_s=NULL; /*normalization string */ H5T_pad_t pad; /*internal padding value */ const char *pad_s=NULL; /*internal padding string */ if (H5T_FLOAT!=H5Tget_class(type)) return FALSE; /* Byte order */ if (H5Tget_size(type)>1) { order = H5Tget_order(type); if (H5T_ORDER_LE==order) { order_s = " little-endian"; } else if (H5T_ORDER_BE==order) { order_s = " big-endian"; } else if (H5T_ORDER_VAX==order) { order_s = " mixed-endian"; } else { order_s = " unknown-byte-order"; } } else { order_s = ""; } /* * Print size and byte order on first line, precision and padding on * subsequent lines. */ printf("%lu-bit%s floating-point", (unsigned long)(8*H5Tget_size(type)), order_s); display_precision(type, indent); /* Print sizes, locations, and other information about each field */ H5Tget_fields (type, &spos, &epos, &esize, &mpos, &msize); ebias = H5Tget_ebias(type); norm = H5Tget_norm(type); switch (norm) { case H5T_NORM_IMPLIED: norm_s = ", msb implied"; break; case H5T_NORM_MSBSET: norm_s = ", msb always set"; break; case H5T_NORM_NONE: norm_s = ", no normalization"; break; case H5T_NORM_ERROR: norm_s = ", unknown normalization"; break; } printf("\n%*s(significant for %lu bit%s at bit %lu%s)", indent, "", (unsigned long)msize, 1==msize?"":"s", (unsigned long)mpos, norm_s); printf("\n%*s(exponent for %lu bit%s at bit %lu, bias is 0x%lx)", indent, "", (unsigned long)esize, 1==esize?"":"s", (unsigned long)epos, (unsigned long)ebias); printf("\n%*s(sign bit at %lu)", indent, "", (unsigned long)spos); /* Display internal padding */ if (1+esize+msize0) { printf("["); for (j=0; j0) H5Tconvert(super, native, nmembs, value, NULL); /* Sort members by increasing value */ /*not implemented yet*/ /* Print members */ for (i=0; i", indent+4, ""); printf("\n%*s}", indent, ""); return TRUE; } /*------------------------------------------------------------------------- * Function: display_string_type * * Purpose: Print information about a string data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_string_type(hid_t type, int UNUSED indent) { H5T_str_t pad; const char *pad_s=NULL; H5T_cset_t cset; const char *cset_s=NULL; if (H5T_STRING!=H5Tget_class(type)) return FALSE; /* Padding */ pad = H5Tget_strpad(type); switch (pad) { case H5T_STR_NULLTERM: pad_s = "null-terminated"; break; case H5T_STR_NULLPAD: pad_s = "null-padded"; break; case H5T_STR_SPACEPAD: pad_s = "space-padded"; break; case H5T_STR_RESERVED_3: case H5T_STR_RESERVED_4: case H5T_STR_RESERVED_5: case H5T_STR_RESERVED_6: case H5T_STR_RESERVED_7: case H5T_STR_RESERVED_8: case H5T_STR_RESERVED_9: case H5T_STR_RESERVED_10: case H5T_STR_RESERVED_11: case H5T_STR_RESERVED_12: case H5T_STR_RESERVED_13: case H5T_STR_RESERVED_14: case H5T_STR_RESERVED_15: case H5T_STR_ERROR: pad_s = "unknown-format"; break; } /* Character set */ cset = H5Tget_cset(type); switch (cset) { case H5T_CSET_ASCII: cset_s = "ASCII"; break; case H5T_CSET_RESERVED_1: case H5T_CSET_RESERVED_2: case H5T_CSET_RESERVED_3: case H5T_CSET_RESERVED_4: case H5T_CSET_RESERVED_5: case H5T_CSET_RESERVED_6: case H5T_CSET_RESERVED_7: case H5T_CSET_RESERVED_8: case H5T_CSET_RESERVED_9: case H5T_CSET_RESERVED_10: case H5T_CSET_RESERVED_11: case H5T_CSET_RESERVED_12: case H5T_CSET_RESERVED_13: case H5T_CSET_RESERVED_14: case H5T_CSET_RESERVED_15: case H5T_CSET_ERROR: cset_s = "unknown-character-set"; break; } printf("%lu-byte %s %s string", (unsigned long)H5Tget_size(type), pad_s, cset_s); return TRUE; } /*------------------------------------------------------------------------- * Function: display_reference_type * * Purpose: Prints information about a reference data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * Robb Matzke, 1999-06-04 * Knows about object and dataset region references. * *------------------------------------------------------------------------- */ static hbool_t display_reference_type(hid_t type, int UNUSED indent) { if (H5T_REFERENCE!=H5Tget_class(type)) return FALSE; if (H5Tequal(type, H5T_STD_REF_OBJ)) { printf("object reference"); } else if (H5Tequal(type, H5T_STD_REF_DSETREG)) { printf("dataset region reference"); } else { printf("%lu-byte unknown reference", (unsigned long)H5Tget_size(type)); } return TRUE; } /*------------------------------------------------------------------------- * Function: display_opaque_type * * Purpose: Prints information about an opaque data type. * * Return: Success: TRUE * * Failure: FALSE, nothing printed * * Programmer: Robb Matzke * Monday, June 7, 1999 * * Modifications: * *------------------------------------------------------------------------- */ static hbool_t display_opaque_type(hid_t type, int indent) { char *tag; size_t size; if (H5T_OPAQUE!=H5Tget_class(type)) return FALSE; size = H5Tget_size(type); printf("%lu-byte opaque type", (unsigned long)size); if ((tag=H5Tget_tag(type))) { printf("\n%*s(tag = \"", indent, ""); display_string(stdout, tag, FALSE); printf("\")"); free(tag); } return TRUE; } /*------------------------------------------------------------------------- * Function: display_type * * Purpose: Prints a data type definition. The definition is printed * without any leading space or trailing line-feed (although * there might be line-feeds inside the type definition). The * first line is assumed to have INDENT characters before it on * the same line (printed by the caller). * * Return: void * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void display_type(hid_t type, int indent) { H5T_class_t data_class = H5Tget_class(type); /* Bad data type */ if (type<0) { printf(""); return; } /* Shared? */ if (H5Tcommitted(type)) printf("shared "); /* Print the type */ if (display_native_type(type, indent) || display_ieee_type(type, indent) || display_int_type(type, indent) || display_float_type(type, indent) || display_cmpd_type(type, indent) || display_enum_type(type, indent) || display_string_type(type, indent) || display_reference_type(type, indent) || display_opaque_type(type, indent)) { return; } /* Unknown type */ printf("%lu-byte class-%u unknown", (unsigned long)H5Tget_size(type), (unsigned)data_class); } /*------------------------------------------------------------------------- * Function: dump_dataset_values * * Purpose: Prints all values of a dataset. * * Return: void * * Programmer: Robb Matzke * Tuesday, July 21, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static void dump_dataset_values(hid_t dset) { hid_t f_type = H5Dget_type(dset); size_t size = H5Tget_size(f_type); h5dump_t info; /* Set to all default values and then override */ memset(&info, 0, sizeof info); info.idx_fmt = "(%s)"; info.line_ncols = width_g; info.line_multi_new = 1; if (label_g) info.cmpd_name = "%s="; /* * If a compound datatype is split across multiple lines then indent * the continuation line. */ info.line_pre = " %s "; info.line_cont = " %s "; if (hexdump_g) { /* * Print all data in hexadecimal format if the `-x' or `--hexdump' * command line switch was given. */ info.raw = TRUE; } else if (string_g && 1==size && H5T_INTEGER==H5Tget_class(f_type)) { /* * Print 1-byte integer data as an ASCI character string instead of * integers if the `-s' or `--string' command-line option was given. */ info.ascii = TRUE; info.elmt_suf1 = ""; info.elmt_suf2 = ""; info.line_pre =" %s \""; info.line_suf = "\""; } /* * Print all the values. */ printf(" Data:\n"); if (h5dump_dset(stdout, &info, dset, -1)<0) { printf(" Unable to print data.\n"); } H5Tclose(f_type); } /*------------------------------------------------------------------------- * Function: list_attr * * Purpose: Prints information about attributes. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Friday, June 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t list_attr (hid_t obj, const char *attr_name, void UNUSED *op_data) { hid_t attr, space, type, p_type; hsize_t size[64], nelmts=1; int ndims, i, n; size_t need; void *buf; h5dump_t info; printf(" Attribute: "); n = display_string(stdout, attr_name, TRUE); printf("%*s", MAX(0, 9-n), ""); if ((attr = H5Aopen_name(obj, attr_name))) { space = H5Aget_space(attr); type = H5Aget_type(attr); /* Data space */ ndims = H5Sget_simple_extent_dims(space, size, NULL); if (0==ndims) { puts(" scalar"); } else { printf(" {"); for (i=0; i=0) { need = nelmts * MAX(H5Tget_size(type), H5Tget_size(p_type)); buf = malloc(need); assert(buf); if (H5Aread(attr, p_type, buf)>=0) { h5dump_mem(stdout, &info, p_type, space, buf); } free(buf); H5Tclose(p_type); } H5Sclose(space); H5Tclose(type); H5Aclose(attr); } else { putchar('\n'); } return 0; } /*------------------------------------------------------------------------- * Function: dataset_list1 * * Purpose: List information about a dataset which should appear on the * same line as the dataset name. This information will precede * information which is applicable to all objects which will be * printed by the caller. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Thursday, August 27, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t dataset_list1(hid_t dset) { hsize_t cur_size[64]; /*current dataset dimensions */ hsize_t max_size[64]; /*maximum dataset dimensions */ hid_t space; /*data space */ int ndims; /*dimensionality */ int i; /* * Information that goes on the same row as the name. The name has * already been printed. */ space = H5Dget_space(dset); ndims = H5Sget_simple_extent_dims(space, cur_size, max_size); printf (" {"); for (i=0; i0) { HDfprintf(stdout, "/%Hu", max_size[i]); } } if (0==ndims) printf("SCALAR"); putchar('}'); H5Sclose (space); return 0; } /*------------------------------------------------------------------------- * Function: dataset_list2 * * Purpose: List information about a dataset which should appear after * information which is general to all objects. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Thursday, August 27, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t dataset_list2(hid_t dset, const char UNUSED *name) { hid_t dcpl; /*dataset creation property list*/ hid_t type; /*data type of dataset */ hid_t space; /*data space of dataset */ int nf; /*number of filters */ unsigned filt_flags; /*filter flags */ H5Z_filter_t filt_id; /*filter identification number */ unsigned cd_values[20]; /*filter client data values */ size_t cd_nelmts; /*filter client number of values*/ size_t cd_num; /*filter client data counter */ char f_name[256]; /*filter/file name */ char s[64]; /*temporary string buffer */ off_t f_offset; /*offset in external file */ hsize_t f_size; /*bytes used in external file */ hsize_t total, used; /*total size or offset */ hsize_t chsize[64]; /*chunk size in elements */ int ndims; /*dimensionality */ int n, max_len; /*max extern file name length */ double utilization; /*percent utilization of storage*/ int i; if (verbose_g>0) { dcpl = H5Dget_create_plist(dset); space = H5Dget_space(dset); type = H5Dget_type(dset); /* Print information about chunked storage */ if (H5D_CHUNKED==H5Pget_layout(dcpl)) { ndims = H5Pget_chunk(dcpl, NELMTS(chsize), chsize/*out*/); printf(" %-10s {", "Chunks:"); total = H5Tget_size(type); for (i=0; i0) { #ifdef WIN32 hsize_t mask = (hsize_t)1 << (8*sizeof(hsize_t)-1); if ((used & mask) || (total & mask)) { total = 0; /*prevent utilization printing*/ } else { utilization = (hssize_t)used*100.0 /(hssize_t)total; } #else utilization = (used*100.0)/total; #endif printf(", %1.2f%% utilization", utilization/*(used*100.0)/total*/); } putchar('\n'); /* Print information about external strorage */ if ((nf = H5Pget_external_count(dcpl))>0) { for (i=0, max_len=0; i0) { for (i=0; i0) { printf(" %-10s ", "Type:"); display_type(type, 15); printf("\n"); } return 0; } /*------------------------------------------------------------------------- * Function: ragged_list2 * * Purpose: List information about a ragged array which should appear * after information which is general to all objects. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Thursday, November 5, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t ragged_list2(hid_t UNUSED ra, const char UNUSED *name) { if (data_g) { puts(" Data: Not implemented yet (see values of member"); puts(" datasets `raw', `over', and `meta')"); } return -1; } /*------------------------------------------------------------------------- * Function: link_open * * Purpose: This gets called to open a symbolic link. Since symbolic * links don't correspond to actual objects we simply print the * link information and return failure. * * Return: Success: never succeeds * * Failure: -1 * * Programmer: Robb Matzke * Thursday, August 27, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static hid_t link_open(hid_t location, const char *name) { char buf[64]; if (H5Gget_linkval (location, name, sizeof(buf), buf)<0) return -1; if (NULL==HDmemchr(buf, 0, sizeof(buf))) { strcpy(buf+sizeof(buf)-4, "..."); } puts(buf); return -1; } /*------------------------------------------------------------------------- * Function: list * * Purpose: Prints the group member name. * * Return: Success: 0 * * Failure: -1 * * Programmer: Robb Matzke * Monday, March 23, 1998 * * Modifications: * *------------------------------------------------------------------------- */ static herr_t list (hid_t group, const char *name, void *_iter) { hid_t obj=-1; char buf[512], comment[50], *fullname=NULL, *s=NULL; H5G_stat_t sb; struct tm *tm; herr_t status; iter_t *iter = (iter_t*)_iter; int n; /* Print the object name, either full name or base name */ fullname = fix_name(iter->container, name); if (fullname_g) { n = display_string(stdout, fullname, TRUE); printf("%*s ", MAX(0, 24-n), ""); } else { n = display_string(stdout, name, TRUE); printf("%*s ", MAX(0, 24-n), ""); } /* Get object information */ H5E_BEGIN_TRY { status = H5Gget_objinfo(group, name, FALSE, &sb); } H5E_END_TRY; if (status<0) { puts("**NOT FOUND**"); return 0; } else if (sb.type<0 || sb.type>=H5G_NTYPES) { printf("Unknown type(%d)", sb.type); sb.type = -1; } if (sb.type>=0 && dispatch_g[sb.type].name) { fputs(dispatch_g[sb.type].name, stdout); } /* * If the object has already been printed then just show the object ID * and return. */ if ((s=sym_lookup(&sb))) { printf(", same as "); display_string(stdout, s, TRUE); printf("\n"); goto done; } else { sym_insert(&sb, fullname); } /* * Open the object. Not all objects can be opened. If this is the case * then return right away. */ if (sb.type>=0 && (NULL==dispatch_g[sb.type].open || (obj=(dispatch_g[sb.type].open)(group, name))<0)) { printf(" *ERROR*\n"); goto done; } /* * List the first line of information for the object. */ if (sb.type>=0 && dispatch_g[sb.type].list1) { (dispatch_g[sb.type].list1)(obj); } putchar('\n'); /* * Show detailed information about the object, beginning with information * which is common to all objects. */ if (verbose_g>0) { if (sb.type>=0) H5Aiterate(obj, NULL, list_attr, NULL); printf(" %-10s %lu:%lu:%lu:%lu\n", "Location:", sb.fileno[1], sb.fileno[0], sb.objno[1], sb.objno[0]); printf(" %-10s %u\n", "Links:", sb.nlink); if (sb.mtime>0 && NULL!=(tm=localtime(&(sb.mtime)))) { strftime(buf, sizeof(buf), "%Y-%m-%d %H:%M:%S %Z", tm); printf(" %-10s %s\n", "Modified:", buf); } comment[0] = '\0'; H5Gget_comment(group, name, sizeof(comment), comment); strcpy(comment+sizeof(comment)-4, "..."); if (comment[0]) { printf(" %-10s \"", "Comment:"); display_string(stdout, comment, FALSE); puts("\""); } } if (sb.type>0 && dispatch_g[sb.type].list2) { (dispatch_g[sb.type].list2)(obj, fullname); } /* * Close the object. */ done: if (sb.type>0 && obj>=0) (dispatch_g[sb.type].close)(obj); if (fullname) free(fullname); return 0; } /*------------------------------------------------------------------------- * Function: fix_name * * Purpose: Returns a malloc'd buffer that contains the PATH and BASE * names separated by a single slash. It also removes duplicate * and trailing slashes and insures that the name begins with a * slash. * * Return: Success: Ptr to fixed name from malloc() * * Failure: NULL * * Programmer: Robb Matzke * Thursday, January 21, 1999 * * Modifications: * *------------------------------------------------------------------------- */ static char * fix_name(const char *path, const char *base) { size_t n = (path?strlen(path):0) + (base?strlen(base):0) + 3; char *s = malloc(n), prev='\0'; int len=0; if (path) { /* Slash, followed by path, followed by slash */ if ('/'!=*path) prev = s[len++] = '/'; for (/*void*/; *path; path++) { if ('/'!=*path || '/'!=prev) prev = s[len++] = *path; } if ('/'!=prev) prev = s[len++] = '/'; } if (base) { /* Base name w/o trailing slashes */ const char *end = base + strlen(base); while (end>base && '/'==end[-1]) --end; for (/*void*/; base=0 && w.ws_col>0) { width = w.ws_col; } } #elif defined(HAVE_TIOCGETD) && defined(HAVE_IOCTL) { /* Unix with ioctl(TIOCGETD) */ struct uwdata w; if (ioctl(2, WIOCGETD, &w)>=0 && w.uw_width>0) { width = w.uw_width / w.uw_hs; } } #endif /* Set to at least 1 */ if (width<1) width = 1; return width; } /*------------------------------------------------------------------------- * Function: main * * Purpose: Opens a file and lists the specified group * * Return: Success: 0 * * Failure: 1 * * Programmer: Robb Matzke * Monday, March 23, 1998 * * Modifications: * *------------------------------------------------------------------------- */ int main (int argc, char *argv[]) { hid_t file, plist=H5P_DEFAULT, root; const char *fname = NULL; const char *progname; const char *s = NULL; char *rest, *container=NULL; int argno; H5G_stat_t sb; iter_t iter; DISPATCH(H5G_DATASET, "Dataset", H5Dopen, H5Dclose, dataset_list1, dataset_list2); DISPATCH(H5G_GROUP, "Group", H5Gopen, H5Gclose, NULL, group_list2); DISPATCH(H5G_TYPE, "Type", H5Topen, H5Tclose, NULL, datatype_list2); DISPATCH(H5G_LINK, "-> ", link_open, NULL, NULL, NULL); DISPATCH(H5G_RAGGED, "Ragged Array", H5Gopen, H5Gclose, NULL, ragged_list2); /*init the programtype var fromthe tools lib*/ programtype = H5LS; /* Name of this program without the path */ if ((progname=strrchr(argv[0], '/'))) progname++; else progname = argv[0]; /* Default output width */ width_g = get_width(); /* Switches come before non-switch arguments */ for (argno=1; argno=argc) { usage(progname); exit(1); } else { s = argv[++argno]; } width_g = (int)strtol(s, &rest, 0); if (width_g<=0 || *rest) { usage(progname); exit(1); } } else if ('-'!=argv[argno][1]) { /* Single-letter switches */ for (s=argv[argno]+1; *s; s++) { switch (*s) { case '?': case 'h': /* --help */ usage(progname); exit(0); case 'a': /* --address */ address_g = TRUE; break; case 'd': /* --data */ data_g = TRUE; break; case 'f': /* --full */ fullname_g = TRUE; break; case 'g': /* --group */ grp_literal_g = TRUE; break; case 'l': /* --label */ label_g = TRUE; break; case 'r': /* --recursive */ recursive_g = TRUE; fullname_g = TRUE; break; case 's': /* --string */ string_g = TRUE; break; case 'v': /* --verbose */ verbose_g++; break; case 'V': /* --version */ printf("This is %s version %u.%u release %u\n", progname, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE); exit(0); case 'x': /* --hexdump */ hexdump_g = TRUE; break; default: usage(progname); exit(1); } } } else { usage(progname); exit(1); } } /* * The first non-switch argument is a file name. If the file name * contains a `%' then assume that a file family is being opened. */ if (argno=argc) { if (grp_literal_g) { root = H5Gopen(file, "/"); iter.container = "/"; list(root, "/", &iter); H5Gclose(root); } else { H5Gget_objinfo(file, "/", TRUE, &sb); sym_insert(&sb, "/"); iter.container = "/"; H5Giterate(file, "/", NULL, list, &iter); } } else { for (/*void*/; argno=0 && H5G_GROUP==sb.type && !grp_literal_g) { /* * Specified name is a group. List the complete contents of * the group. */ sym_insert(&sb, argv[argno]); iter.container = container = fix_name("", argv[argno]); H5Giterate(file, argv[argno], NULL, list, &iter); free(container); } else if ((root=H5Gopen(file, "/"))<0) { exit(1); /*major problem!*/ } else { /* * Specified name is a non-group object -- list that object. * The container for the object is everything up to the base * name. */ iter.container = "/"; list(root, argv[argno], &iter); if (H5Gclose(root)<0) exit(1); } } } if (H5Fclose(file)<0) exit(1); return 0; }