cmake_minimum_required (VERSION 2.8) PROJECT (HDF5_TOOLS_H5REPACK) #----------------------------------------------------------------------------- # Setup include Directories #----------------------------------------------------------------------------- INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib) INCLUDE_DIRECTORIES (${HDF5_TEST_SRC_DIR}) # -------------------------------------------------------------------- # Add h5Repack executables # -------------------------------------------------------------------- SET (REPACK_COMMON_SRCS ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_copy.c ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_filters.c ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_opttable.c ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_parse.c ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_refs.c ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_verify.c ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack.c ) ADD_EXECUTABLE (h5repack ${REPACK_COMMON_SRCS} ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_main.c) TARGET_NAMING (h5repack ${LIB_TYPE}) TARGET_LINK_LIBRARIES (h5repack ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) SET (H5_DEP_EXECUTABLES h5repack) ############################################################################## ############################################################################## ### T E S T I N G ### ############################################################################## ############################################################################## IF (BUILD_TESTING) # -------------------------------------------------------------------- # Add h5Repack test executables # -------------------------------------------------------------------- ADD_EXECUTABLE (testh5repack_detect_szip ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testh5repack_detect_szip.c) TARGET_NAMING (testh5repack_detect_szip ${LIB_TYPE}) TARGET_LINK_LIBRARIES (testh5repack_detect_szip ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) ADD_TEST (NAME testh5repack_detect_szip COMMAND $) IF (HDF5_ENABLE_SZIP_SUPPORT) IF (HDF5_ENABLE_SZIP_ENCODING) SET (passRegex "yes") SET_TESTS_PROPERTIES (testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "yes") ELSE (HDF5_ENABLE_SZIP_ENCODING) SET (passRegex "no") SET_TESTS_PROPERTIES (testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no") ENDIF (HDF5_ENABLE_SZIP_ENCODING) ELSE (HDF5_ENABLE_SZIP_SUPPORT) SET (passRegex "no") SET_TESTS_PROPERTIES (testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no") ENDIF (HDF5_ENABLE_SZIP_SUPPORT) ADD_EXECUTABLE (h5repacktest ${REPACK_COMMON_SRCS} ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repacktst.c) TARGET_NAMING (h5repacktest ${LIB_TYPE}) TARGET_LINK_LIBRARIES (h5repacktest ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET}) ADD_TEST (NAME h5repacktest COMMAND $) SET_TESTS_PROPERTIES (h5repacktest PROPERTIES DEPENDS testh5repack_detect_szip) IF (HDF5_TEST_VFD) SET (VFD_LIST sec2 stdio core split multi family ) IF (DIRECT_VFD) SET (VFD_LIST ${VFD_LIST} direct) ENDIF (DIRECT_VFD) MACRO (ADD_VFD_TEST vfdname resultcode) ADD_TEST ( NAME VFD-${vfdname}-h5repacktest COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=$" -D "TEST_ARGS:STRING=" -D "TEST_VFD:STRING=${vfdname}" -D "TEST_EXPECT=${resultcode}" -D "TEST_OUTPUT=h5repacktest" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" -P "${HDF5_RESOURCES_DIR}/vfdTest.cmake" ) ENDMACRO (ADD_VFD_TEST) # Run test with different Virtual File Driver FOREACH (vfd ${VFD_LIST}) ADD_VFD_TEST (${vfd} 0) ENDFOREACH (vfd ${VFD_LIST}) ENDIF (HDF5_TEST_VFD) # -------------------------------------------------------------------- # Copy all the HDF5 files from the test directory into the source directory # -------------------------------------------------------------------- SET (HDF5_REFERENCE_TEST_FILES h5repack_ext.bin ublock.bin h5repack.info h5repack_attr.h5 h5repack_attr_refs.h5 h5repack_deflate.h5 h5repack_early.h5 h5repack_ext.h5 h5repack_fill.h5 h5repack_filters.h5 h5repack_fletcher.h5 h5repack_hlink.h5 h5repack_layout.h5 h5repack_layouto.h5 h5repack_layout2.h5 h5repack_named_dtypes.h5 h5repack_nbit.h5 h5repack_objs.h5 h5repack_refs.h5 h5repack_shuffle.h5 h5repack_soffset.h5 h5repack_szip.h5 ) SET (HDF5_COMMON_TEST_FILES tfamily00000.h5 tfamily00001.h5 tfamily00002.h5 tfamily00003.h5 tfamily00004.h5 tfamily00005.h5 tfamily00006.h5 tfamily00007.h5 tfamily00008.h5 tfamily00009.h5 tfamily00010.h5 h5repack_filters.h5.ddl ) FOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES}) SET (dest "${PROJECT_BINARY_DIR}/testfiles/${h5_file}") #MESSAGE (STATUS " Copying ${h5_file}") ADD_CUSTOM_COMMAND ( TARGET h5repack POST_BUILD COMMAND ${CMAKE_COMMAND} ARGS -E copy_if_different ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/${h5_file} ${dest} ) ENDFOREACH (h5_file ${HDF5_REFERENCE_TEST_FILES}) FOREACH (h5c_file ${HDF5_COMMON_TEST_FILES}) SET (dest "${PROJECT_BINARY_DIR}/testfiles/${h5c_file}") #MESSAGE (STATUS " Copying ${h5_file}") ADD_CUSTOM_COMMAND ( TARGET h5repack POST_BUILD COMMAND ${CMAKE_COMMAND} ARGS -E copy_if_different ${HDF5_TOOLS_SRC_DIR}/testfiles/${h5c_file} ${dest} ) ENDFOREACH (h5c_file ${HDF5_COMMON_TEST_FILES}) ############################################################################## ############################################################################## ### T H E T E S T S M A C R O S ### ############################################################################## ############################################################################## MACRO (ADD_H5_TEST testname testtype testfile) IF (${testtype} STREQUAL "SKIP") ADD_TEST ( NAME H5REPACK-${testname} COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}" ) ELSE (${testtype} STREQUAL "SKIP") ADD_TEST ( NAME H5REPACK-${testname} COMMAND $ ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile} ) IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") ADD_TEST ( NAME H5REPACK-DIFF_${testname} COMMAND $ ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile} ) SET_TESTS_PROPERTIES (H5REPACK-DIFF_${testname} PROPERTIES DEPENDS H5REPACK-${testname}) SET (last_test "H5REPACK-DIFF_${testname}") ENDIF (${testtype} STREQUAL "SKIP") ENDMACRO (ADD_H5_TEST) MACRO (ADD_H5_CMP_TEST testname testfilter testtype resultcode resultfile) IF (${testtype} STREQUAL "SKIP") ADD_TEST ( NAME H5REPACK-${testname} COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out.${resultfile}" ) ELSE (${testtype} STREQUAL "SKIP") # If using memchecker add tests without using scripts IF (HDF5_ENABLE_USING_MEMCHECKER) ADD_TEST (NAME H5REPACK-${testname} COMMAND $ ${ARGN} testfiles/${resultfile} testfiles/out.${resultfile}) ELSE (HDF5_ENABLE_USING_MEMCHECKER) ADD_TEST ( NAME H5REPACK-${testname} COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=$" -D "TEST_ARGS:STRING=${ARGN};testfiles/${resultfile};testfiles/out.${resultfile}" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" -D "TEST_OUTPUT=${resultfile}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_FILTER:STRING=${testfilter}" -D "TEST_REFERENCE=testfiles/${resultfile}.ddl" -P "${HDF5_RESOURCES_DIR}/runTest.cmake" ) ENDIF (HDF5_ENABLE_USING_MEMCHECKER) IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") SET (last_test "H5REPACK-${testname}") ENDIF (${testtype} STREQUAL "SKIP") ENDMACRO (ADD_H5_CMP_TEST) MACRO (ADD_H5_VERIFY_TEST testname testtype resultcode testfile testdset testfilter) IF (${testtype} STREQUAL "SKIP") ADD_TEST ( NAME H5REPACK_VERIFY_LAYOUT-${testname} COMMAND ${CMAKE_COMMAND} -E echo "SKIP -d ${testdset} -pH ${PROJECT_BINARY_DIR}/testfiles/out.${resultfile}" ) ELSE (${testtype} STREQUAL "SKIP") IF (NOT HDF5_ENABLE_USING_MEMCHECKER) IF (${resultcode} STREQUAL "0") ADD_TEST ( NAME H5REPACK_VERIFY_LAYOUT-${testname} COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=$" -D "TEST_ARGS:STRING=-d;${testdset};-pH;testfiles/out.${testfile}" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" -D "TEST_OUTPUT=${testfile}-v.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_FILTER:STRING=${testfilter}" -D "TEST_REFERENCE=${testfilter}" -P "${HDF5_RESOURCES_DIR}/grepTest.cmake" ) IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname} PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") SET (last_test "H5REPACK_VERIFY_LAYOUT-${testname}") ELSE (${resultcode} STREQUAL "0") IF (${testfilter} STREQUAL "CHUNKED") SET (nottestfilter "(CONTIGUOUS|COMPACT)") ENDIF (${testfilter} STREQUAL "CHUNKED") IF (${testfilter} STREQUAL "CONTIGUOUS") SET (nottestfilter "(CHUNK|COMPACT)") ENDIF (${testfilter} STREQUAL "CONTIGUOUS") IF (${testfilter} STREQUAL "COMPACT") SET (nottestfilter "(CONTIGUOUS|CHUNK)") ENDIF (${testfilter} STREQUAL "COMPACT") ADD_TEST ( NAME H5REPACK_VERIFY_LAYOUT_ALL-${testname} COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=$" -D "TEST_ARGS:STRING=-pH;testfiles/out.${testfile}" -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" -D "TEST_OUTPUT=${testfile}-v.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_FILTER:STRING=${nottestfilter}" -D "TEST_REFERENCE=${testfilter}" -P "${HDF5_RESOURCES_DIR}/grepTest.cmake" ) IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT_ALL-${testname} PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") SET (last_test "H5REPACK_VERIFY_LAYOUT_ALL-${testname}") ENDIF (${resultcode} STREQUAL "0") ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER) ENDIF (${testtype} STREQUAL "SKIP") ENDMACRO (ADD_H5_VERIFY_TEST) ############################################################################## ############################################################################## ### T H E T E S T S ### ############################################################################## ############################################################################## # Remove any output file left over from previous test run ADD_TEST ( NAME H5REPACK-clearall-objects COMMAND ${CMAKE_COMMAND} -E remove h5repack_attr.h5.out h5repack_attr.h5.out.err h5repack_deflate.h5.out h5repack_deflate.h5.out.err h5repack_early.h5.out h5repack_early.h5.out.err h5repack_ext.h5.out h5repack_ext.h5.out.err h5repack_fill.h5.out h5repack_fill.h5.out.err h5repack_filters.h5.out h5repack_filters.h5.out.err h5repack_fletcher.h5.out h5repack_fletcher.h5.out.err h5repack_hlink.h5.out h5repack_hlink.h5.out.err h5repack_layout.h5.out h5repack_layout.h5.out.err h5repack_layout.h5-v.out h5repack_layout.h5-v.out.err h5repack_layouto.h5.out h5repack_layouto.h5.out.err h5repack_layout2.h5-v.out h5repack_layout2.h5-v.out.err h5repack_named_dtypes.h5.out h5repack_named_dtypes.h5.out.err h5repack_nbit.h5.out h5repack_nbit.h5.out.err h5repack_objs.h5.out h5repack_objs.h5.out.err h5repack_refs.h5.out h5repack_refs.h5.out.err h5repack_shuffle.h5.out h5repack_shuffle.h5.out.err h5repack_soffset.h5.out h5repack_soffset.h5.out.err h5repack_szip.h5.out h5repack_szip.h5.out.err h5repack_attr_out.h5 h5repack_deflate_out.h5 h5repack_early_out.h5 h5repack_ext_out.h5 h5repack_fill_out.h5 h5repack_filters_out.h5 h5repack_fletcher_out.h5 h5repack_hlink_out.h5 h5repack_layout_out.h5 h5repack_layouto_out.h5 h5repack_layout2_out.h5 h5repack_named_dtypes_out.h5 h5repack_nbit_out.h5 h5repack_objs_out.h5 h5repack_refs_out.h5 h5repack_shuffle_out.h5 h5repack_soffset_out.h5 h5repack_szip_out.h5 h5repack_ub.h5 h5repack_ub_out.h5 h5repack_attr_refs_out.h5 ) IF (NOT "${last_test}" STREQUAL "") SET_TESTS_PROPERTIES (H5REPACK-clearall-objects PROPERTIES DEPENDS ${last_test}) ENDIF (NOT "${last_test}" STREQUAL "") SET (last_test "H5REPACK-clearall-objects") # -------------------------------------------------------------------- # test file names # -------------------------------------------------------------------- SET (INFO_FILE testfiles/h5repack.info) SET (FILE0 h5repack_fill.h5) SET (FILE1 h5repack_objs.h5) SET (FILE2 h5repack_attr.h5) SET (FILE3 h5repack_hlink.h5) SET (FILE4 h5repack_layout.h5) SET (FILE5 h5repack_early.h5) SET (FILE7 h5repack_szip.h5) SET (FILE8 h5repack_deflate.h5) SET (FILE9 h5repack_shuffle.h5) SET (FILE10 h5repack_fletcher.h5) SET (FILE11 h5repack_filters.h5) SET (FILE12 h5repack_nbit.h5) SET (FILE13 h5repack_soffset.h5) SET (FILE14 h5repack_layouto.h5 ) # A file with an older version of the layout message (copy of test/tlayouto.h5) SET (FILE15 h5repack_named_dtypes.h5) SET (FILE16 tfamily%05d.h5) # located in common testfiles folder SET (FILE18 h5repack_layout2.h5) SET (FILE_REF h5repack_refs.h5) SET (FILE_ATTR_REF h5repack_attr_refs.h5) # # The tests # We use the files generated by h5repacktst # Each run generates ".out.h5" and the tool h5diff is used to # compare the input and output files # # the tests are the same as the program h5repacktst, but run from the CLI # # See which filters are usable (and skip tests for filters we # don't have). Do this by searching H5pubconf.h to see which # filters are defined. # detect whether the encoder is present. SET (USE_FILTER_SZIP_ENCODER "no") IF (HDF5_ENABLE_SZIP_ENCODING) SET (USE_FILTER_SZIP_ENCODER ${testh5repack_detect_szip}) ENDIF (HDF5_ENABLE_SZIP_ENCODING) IF (H5_HAVE_FILTER_DEFLATE) SET (USE_FILTER_DEFLATE "true") ENDIF (H5_HAVE_FILTER_DEFLATE) IF (H5_HAVE_FILTER_SZIP) SET (USE_FILTER_SZIP "true") ENDIF (H5_HAVE_FILTER_SZIP) IF (H5_HAVE_FILTER_SHUFFLE) SET (USE_FILTER_SHUFFLE "true") ENDIF (H5_HAVE_FILTER_SHUFFLE) IF (H5_HAVE_FILTER_FLETCHER32) SET (USE_FILTER_FLETCHER32 "true") ENDIF (H5_HAVE_FILTER_FLETCHER32) IF (H5_HAVE_FILTER_NBIT) SET (USE_FILTER_NBIT "true") ENDIF (H5_HAVE_FILTER_NBIT) IF (H5_HAVE_FILTER_SCALEOFFSET) SET (USE_FILTER_SCALEOFFSET "true") ENDIF (H5_HAVE_FILTER_SCALEOFFSET) # copy files (these files have no filters) ADD_H5_TEST (fill "TEST" ${FILE0}) ADD_H5_TEST (objs "TEST" ${FILE1}) ADD_H5_TEST (attr "TEST" ${FILE2}) ADD_H5_TEST (hlink "TEST" ${FILE3}) ADD_H5_TEST (layout "TEST" ${FILE4}) ADD_H5_TEST (early "TEST" ${FILE5}) # use $FILE4 to write some filters (this file has no filters) # gzip with individual object SET (arg ${FILE4} -f dset1:GZIP=1 -l dset1:CHUNK=20x10) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (gzip_individual ${TESTTYPE} ${arg}) # gzip for all SET (arg ${FILE4} -f GZIP=1) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (gzip_all ${TESTTYPE} ${arg}) # szip with individual object SET (arg ${FILE4} -f dset2:SZIP=8,EC -l dset2:CHUNK=20x10) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) ADD_H5_TEST (szip_individual ${TESTTYPE} ${arg}) # szip for all SET (arg ${FILE4} -f SZIP=8,NN) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) ADD_H5_TEST (szip_all ${TESTTYPE} ${arg}) # shuffle with individual object SET (arg ${FILE4} -f dset2:SHUF -l dset2:CHUNK=20x10) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SHUFFLE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SHUFFLE) ADD_H5_TEST (shuffle_individual ${TESTTYPE} ${arg}) # shuffle for all SET (arg ${FILE4} -f SHUF) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SHUFFLE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SHUFFLE) ADD_H5_TEST (shuffle_all ${TESTTYPE} ${arg}) # fletcher32 with individual object SET (arg ${FILE4} -f dset2:FLET -l dset2:CHUNK=20x10) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_FLETCHER32) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_FLETCHER32) ADD_H5_TEST (fletcher_individual ${TESTTYPE} ${arg}) # fletcher32 for all SET (arg ${FILE4} -f FLET) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_FLETCHER32) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_FLETCHER32) ADD_H5_TEST (fletcher_all ${TESTTYPE} ${arg}) # all filters SET (arg ${FILE4} -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE) ADD_H5_TEST (all_filters ${TESTTYPE} ${arg}) # verbose gzip with individual object SET (arg ${FILE11} -v -f /dset_deflate:GZIP=9) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_CMP_TEST (gzip_verbose_filters "O?...ing file[^\n]+\n" ${TESTTYPE} 0 ${arg}) ########################################################### # the following tests assume the input files have filters ########################################################### # szip copy SET (arg ${FILE7}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) ADD_H5_TEST (szip_copy ${TESTTYPE} ${arg}) # szip remove SET (arg ${FILE7} --filter=dset_szip:NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP) ADD_H5_TEST (szip_remove ${TESTTYPE} ${arg}) # deflate copy SET (arg ${FILE8}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (deflate_copy ${TESTTYPE} ${arg}) # deflate remove SET (arg ${FILE8} -f dset_deflate:NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (deflate_remove ${TESTTYPE} ${arg}) # shuffle copy SET (arg ${FILE9}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SHUFFLE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SHUFFLE) ADD_H5_TEST (shuffle_copy ${TESTTYPE} ${arg}) # shuffle remove SET (arg ${FILE9} -f dset_shuffle:NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SHUFFLE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SHUFFLE) ADD_H5_TEST (shuffle_remove ${TESTTYPE} ${arg}) # fletcher32 copy SET (arg ${FILE10}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_FLETCHER32) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_FLETCHER32) ADD_H5_TEST (fletcher_copy ${TESTTYPE} ${arg}) # fletcher32 remove SET (arg ${FILE10} -f dset_fletcher32:NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_FLETCHER32) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_FLETCHER32) ADD_H5_TEST (fletcher_remove ${TESTTYPE} ${arg}) # nbit copy SET (arg ${FILE12}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_NBIT) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_NBIT) ADD_H5_TEST (nbit_copy ${TESTTYPE} ${arg}) # nbit remove SET (arg ${FILE12} -f dset_nbit:NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_NBIT) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_NBIT) ADD_H5_TEST (nbit_remove ${TESTTYPE} ${arg}) # nbit add SET (arg ${FILE12} -f dset_int31:NBIT) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_NBIT) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_NBIT) ADD_H5_TEST (nbit_add ${TESTTYPE} ${arg}) # scaleoffset copy SET (arg ${FILE13}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SCALEOFFSET) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SCALEOFFSET) ADD_H5_TEST (scale_copy ${TESTTYPE} ${arg}) # scaleoffset add SET (arg ${FILE13} -f dset_none:SOFF=31,IN) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SCALEOFFSET) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SCALEOFFSET) ADD_H5_TEST (scale_add ${TESTTYPE} ${arg}) # scaleoffset remove SET (arg ${FILE13} -f dset_scaleoffset:NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SCALEOFFSET) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SCALEOFFSET) ADD_H5_TEST (scale_remove ${TESTTYPE} ${arg}) # remove all filters SET (arg ${FILE11} -f NONE) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_NBIT OR NOT USE_FILTER_SCALEOFFSET) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_NBIT OR NOT USE_FILTER_SCALEOFFSET) ADD_H5_TEST (remove_all ${TESTTYPE} ${arg}) #filter conversions SET (arg ${FILE8} -f dset_deflate:SZIP=8,NN) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE) ADD_H5_TEST (deflate_convert ${TESTTYPE} ${arg}) SET (arg ${FILE7} -f dset_szip:GZIP=1) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_DEFLATE) ADD_H5_TEST (szip_convert ${TESTTYPE} ${arg}) #limit SET (arg ${FILE4} -f GZIP=1 -m 1024) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (deflate_limit ${TESTTYPE} ${arg}) #file SET (arg ${FILE4} -e ${INFO_FILE}) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (deflate_file ${TESTTYPE} ${arg}) ######################################################### # layout options (these files have no filters) ######################################################### ADD_H5_TEST (dset2_chunk_20x10 "TEST" ${FILE4} --layout=dset2:CHUNK=20x10) ADD_H5_VERIFY_TEST (dset2_chunk_20x10 "TEST" 0 ${FILE4} dset2 CHUNKED) ADD_H5_TEST (chunk_20x10 "TEST" ${FILE4} -l CHUNK=20x10) ADD_H5_VERIFY_TEST (chunk_20x10 "TEST" 1 ${FILE4} null CHUNKED) ADD_H5_TEST (dset2_conti "TEST" ${FILE4} -l dset2:CONTI) ADD_H5_VERIFY_TEST (dset2_conti "TEST" 0 ${FILE4} dset2 CONTIGUOUS) ADD_H5_TEST (conti "TEST" ${FILE4} -l CONTI) ADD_H5_VERIFY_TEST (conti "TEST" 1 ${FILE4} null CONTIGUOUS) ADD_H5_TEST (dset2_compa "TEST" ${FILE4} -l dset2:COMPA) ADD_H5_VERIFY_TEST (dset2_compa "TEST" 0 ${FILE4} dset2 COMPACT) ADD_H5_TEST (compa "TEST" ${FILE4} -l COMPA) ADD_H5_VERIFY_TEST (compa "TEST" 1 ${FILE4} null COMPACT) ################################################################ # layout conversions (file has no filters) ############################################################### ADD_H5_TEST (dset_compa_conti "TEST" ${FILE4} -l dset_compact:CONTI) ADD_H5_VERIFY_TEST (dset_compa_conti "TEST" 0 ${FILE4} dset_compact CONTIGUOUS) ADD_H5_TEST (dset_compa_chunk "TEST" ${FILE4} -l dset_compact:CHUNK=2x5) ADD_H5_VERIFY_TEST (dset_compa_chunk "TEST" 0 ${FILE4} dset_compact CHUNKED) ADD_H5_TEST (dset_compa_compa "TEST" ${FILE4} -l dset_compact:COMPA) ADD_H5_VERIFY_TEST (dset_compa_compa "TEST" 0 ${FILE4} dset_compact COMPACT) ADD_H5_TEST (dset_conti_compa "TEST" ${FILE4} -l dset_contiguous:COMPA) ADD_H5_VERIFY_TEST (dset_conti_compa "TEST" 0 ${FILE4} dset_contiguous COMPACT) ADD_H5_TEST (dset_conti_chunk "TEST" ${FILE4} -l dset_contiguous:CHUNK=3x6) ADD_H5_VERIFY_TEST (dset_conti_chunk "TEST" 0 ${FILE4} dset_contiguous CHUNKED) ADD_H5_TEST (dset_conti_conti "TEST" ${FILE4} -l dset_contiguous:CONTI) ADD_H5_VERIFY_TEST (dset_conti_conti "TEST" 0 ${FILE4} dset_contiguous CONTIGUOUS) ADD_H5_TEST (chunk_compa "TEST" ${FILE4} -l dset_chunk:COMPA) ADD_H5_VERIFY_TEST (chunk_compa "TEST" 0 ${FILE4} dset_chunk COMPACT) ADD_H5_TEST (chunk_conti "TEST" ${FILE4} -l dset_chunk:CONTI) ADD_H5_VERIFY_TEST (chunk_conti "TEST" 0 ${FILE4} dset_chunk CONTIGUOUS) ADD_H5_TEST (chunk_18x13 "TEST" ${FILE4} -l dset_chunk:CHUNK=18x13) ADD_H5_VERIFY_TEST (chunk_18x13 "TEST" 0 ${FILE4} dset_chunk CHUNKED) # test convert small size dataset ( < 1k) to compact layout without -m ADD_H5_TEST (contig_small_compa "TEST" ${FILE18} -l contig_small:COMPA) ADD_H5_VERIFY_TEST (contig_small_compa "TEST" 0 ${FILE18} contig_small COMPACT) ADD_H5_TEST (contig_small_fixed_compa "TEST" ${FILE18} -l chunked_small_fixed:COMPA) ADD_H5_VERIFY_TEST (contig_small_fixed_compa "TEST" 0 ${FILE18} chunked_small_fixed COMPACT) # Native option # Do not use FILE1, as the named dtype will be converted to native, and h5diff will # report a difference. ADD_H5_TEST (native_fill "TEST" ${FILE0} -n) ADD_H5_TEST (native_attr "TEST" ${FILE2} -n) # latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters) SET (arg ${FILE4} --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype]) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (layout_long_switches ${TESTTYPE} ${arg}) ADD_H5_VERIFY_TEST (layout_long_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED) # latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters) SET (arg ${FILE4} -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) ADD_H5_TEST (layout_short_switches ${TESTTYPE} ${arg}) ADD_H5_VERIFY_TEST (layout_short_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED) # several global filters SET (arg ${FILE4} --filter GZIP=1 --filter SHUF) SET (TESTTYPE "TEST") IF (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SHUFFLE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SHUFFLE) ADD_H5_TEST (global_filters ${TESTTYPE} ${arg}) # syntax of -i infile -o outfile # latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters) SET (arg ${FILE4} -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]) SET (TESTTYPE "LEGACY") IF (NOT USE_FILTER_DEFLATE) SET (TESTTYPE "SKIP") ENDIF (NOT USE_FILTER_DEFLATE) #ADD_H5_TEST (old_style_layout_short_switches ${TESTTYPE} ${arg}) # add a userblock to file SET (arg ${FILE1} -u ${PROJECT_BINARY_DIR}/testfiles/ublock.bin -b 2048) ADD_H5_TEST (add_userblock "TEST" ${arg}) # add alignment SET (arg ${FILE1} -t 1 -a 1) ADD_H5_TEST (add_alignment "TEST" ${arg}) # Check repacking file with old version of layout message (should get upgraded # to new version and be readable, etc.) ADD_H5_TEST (upgrade_layout "TEST" ${FILE14}) # test for datum size > H5TOOLS_MALLOCSIZE ADD_H5_TEST (gt_mallocsize "TEST" ${FILE1} -f GZIP=1) # Check repacking file with committed datatypes in odd configurations ADD_H5_TEST (committed_dt "TEST" ${FILE15}) # tests family driver (file is located in common testfiles folder, uses TOOLTEST1 #ADD_H5_TEST ( family "FAMILY" ${FILE16}) # test various references (bug 1814 and 1726) ADD_H5_TEST (bug1814 "TEST" ${FILE_REF}) # test attribute with various references (bug 1797) # the references in attribute of compund or vlen datatype # TODO: include this test when code portion is completed. ADD_H5_TEST (bug1797 "SKIP" ${FILE_ATTR_REF}) ENDIF (BUILD_TESTING) ############################################################################## ############################################################################## ### I N S T A L L A T I O N ### ############################################################################## ############################################################################## #----------------------------------------------------------------------------- # Rules for Installation of tools using make Install target #----------------------------------------------------------------------------- INSTALL ( TARGETS h5repack RUNTIME DESTINATION ${HDF5_INSTALL_BIN_DIR}/tools COMPONENT toolsapplications )