/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include #include #include #include "H5private.h" #include "h5tools_utils.h" #include "h5repack.h" extern char *progname; /*------------------------------------------------------------------------- * Function: check_objects * * Purpose: locate all HDF5 objects in the file and compare with user * supplied list * * Return: 0, ok, -1 no * * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu * * Date: September, 23, 2003 * *------------------------------------------------------------------------- */ int check_objects(const char* fname, pack_opt_t *options) { hid_t fid; int i; trav_table_t *travt=NULL; /*------------------------------------------------------------------------- * open the file *------------------------------------------------------------------------- */ if ((fid=h5tools_fopen(fname, NULL, NULL, 0))<0){ printf("<%s>: %s\n", fname, H5FOPENERROR ); return -1; } /*------------------------------------------------------------------------- * get the list of objects in the file *------------------------------------------------------------------------- */ /* init table */ trav_table_init(&travt); /* get the list of objects in the file */ if (h5trav_gettable(fid,travt)<0) goto out; /*------------------------------------------------------------------------- * compare with user supplied list *------------------------------------------------------------------------- */ if (options->verbose) { printf("Opening file <%s>. Searching for objects to modify...\n",fname); } for ( i = 0; i < options->op_tbl->nelems; i++) { char* name=options->op_tbl->objs[i].path; if (options->verbose) printf(" <%s>",name); /* the input object names are present in the file and are valid */ if (h5trav_getindext(name,travt)<0) { error_msg(progname, "%s Could not find <%s> in file <%s>. Exiting...\n", (options->verbose?"\n":""),name,fname); goto out; } if (options->verbose) printf("...Found\n"); /* check for extra filter conditions */ switch (options->op_tbl->objs[i].filter->filtn) { /* chunk size must be smaller than pixels per block */ case H5Z_FILTER_SZIP: { int j; int csize=1; int ppb=options->op_tbl->objs[i].filter->cd_values[0]; hsize_t dims[H5S_MAX_RANK]; int rank; hid_t did; hid_t sid; if (options->op_tbl->objs[i].chunk.rank>0) { rank=options->op_tbl->objs[i].chunk.rank; for (j=0; jop_tbl->objs[i].chunk.chunk_lengths[j]; } else { if ((did=H5Dopen(fid,travt->objs[i].name))<0) goto out; if ((sid=H5Dget_space(did))<0) goto out; if ( (rank=H5Sget_simple_extent_ndims(sid))<0) goto out; HDmemset(dims, 0, sizeof dims); if ( H5Sget_simple_extent_dims(sid,dims,NULL)<0) goto out; for (j=0; j\n"); goto out; } } break; } } /* i */ /*------------------------------------------------------------------------- * close *------------------------------------------------------------------------- */ H5Fclose(fid); trav_table_free(travt); return 0; out: H5Fclose(fid); trav_table_free(travt); return -1; } /*------------------------------------------------------------------------- * Function: print_objlist * * Purpose: print list of objects in file * * Return: void * * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu * * Date: October 23, 2003 * *------------------------------------------------------------------------- */ void print_objlist(const char *filename, int nobjects, trav_info_t *info ) { int i; printf("File <%s>: # of entries = %d\n", filename, nobjects ); for ( i = 0; i < nobjects; i++) { switch ( info[i].type ) { case H5G_GROUP: printf(" %-10s %s\n", "group", info[i].name ); break; case H5G_DATASET: printf(" %-10s %s\n", "dataset", info[i].name ); break; case H5G_TYPE: printf(" %-10s %s\n", "datatype", info[i].name ); break; case H5G_LINK: printf(" %-10s %s\n", "link", info[i].name ); break; case H5G_UDLINK: printf(" %-10s %s\n", "User defined link", info[i].name ); break; default: printf(" %-10s %s\n", "User defined object", info[i].name ); break; } } }