/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include #include #include "h5tools_utils.h" #include "h5repack.h" /* module-scoped variables */ const char *progname = "h5repack"; int d_status = EXIT_SUCCESS; static void usage(void); /*------------------------------------------------------------------------- * Function: main * * Purpose: h5repack main program * * Return: 1, error, 0, no error * * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu * * Date: May 9, 2003 * * Comments: * * Modifications: July 2004 * Introduced the extra EC or NN option for SZIP * *------------------------------------------------------------------------- */ int main(int argc, char **argv) { char *infile = NULL; char *outfile = NULL; pack_opt_t options; /*the global options */ int i, ret; /* initialize options */ h5repack_init (&options,0); for ( i = 1; i < argc; i++) { if (strcmp(argv[i], "-h") == 0) { usage(); exit(0); } if (strcmp(argv[i], "-i") == 0) { infile = argv[++i]; } else if (strcmp(argv[i], "-o") == 0) { outfile = argv[++i]; } else if (strcmp(argv[i], "-v") == 0) { options.verbose = 1; } else if (strcmp(argv[i], "-f") == 0) { /* add the -f filter option */ if (h5repack_addfilter(argv[i+1],&options)<0) { error_msg(progname, "in parsing filter\n"); exit(1); } /* jump to next */ ++i; } else if (strcmp(argv[i], "-l") == 0) { /* parse the -l layout option */ if (h5repack_addlayout(argv[i+1],&options)<0) { error_msg(progname, "in parsing layout\n"); exit(1); } /* jump to next */ ++i; } else if (strcmp(argv[i], "-m") == 0) { options.threshold = parse_number(argv[i+1]); if ((int)options.threshold==-1) { error_msg(progname, "invalid treshold size <%s>\n",argv[i+1]); exit(1); } ++i; } else if (strcmp(argv[i], "-e") == 0) { read_info(argv[++i],&options); } else if (argv[i][0] == '-') { error_msg(progname, " - is not a valid argument\n"); usage(); exit(1); } } if (infile == NULL || outfile == NULL) { error_msg(progname, "file names missing\n"); usage(); exit(1); } /* pack it */ ret=h5repack(infile,outfile,&options,argc,argv); /* free tables */ h5repack_end(&options); if (ret==-1) return 1; else return 0; } /*------------------------------------------------------------------------- * Function: usage * * Purpose: print usage * * Return: void * *------------------------------------------------------------------------- */ static void usage(void) { printf("h5repack -i input -o output [-h] [-v] [-f 'filter'] [-l 'layout'][-m number][-e file] \n"); printf("\n"); printf("-i input Input HDF5 File\n"); printf("-o output Output HDF5 File\n"); printf("[-h] Print usage message\n"); printf("[-v] Verbose mode. Print more output (list of objects,\n"); printf(" filters, warnings)\n"); printf("[-f 'filter'] Filter type: 'filter' is a string with the format\n"); printf("\n"); printf(" : = \n"); printf("\n"); printf(" is a comma separated list of object names\n"); printf(" meaning apply compression only to those objects.\n"); printf(" if no object names are specified, the filter is applied to all objects\n"); printf(" can be:\n"); printf(" GZIP, to apply the HDF5 GZIP filter (GZIP compression)\n"); printf(" SZIP, to apply the HDF5 SZIP filter (SZIP compression)\n"); printf(" SHUF, to apply the HDF5 shuffle filter\n"); printf(" FLET, to apply the HDF5 checksum filter\n"); printf(" NBIT, to apply the HDF5 NBIT filter (NBIT compression)\n"); printf(" SOFF, to apply the HDF5 Scale/Offset filter\n"); printf(" NONE, to remove the filter\n"); printf(" is optional compression info\n"); printf(" SHUF (no parameter)\n"); printf(" FLET (no parameter)\n"); printf(" NBIT (no parameter)\n"); printf(" GZIP= from 1-9\n"); printf(" SZIP=\n"); printf(" (pixels per block is a even number in 2-32 and coding method\n"); printf(" is 'EC' or 'NN')\n"); printf(" SOFF=\n"); printf(" (scale_factor is an integer and scale_type is either 'IN'\n"); printf(" for integer type, or 'DS', for floating point type\n"); printf(" using the D-scaling method)\n"); printf("[-l 'layout'] Layout type. 'layout' is a string with the format\n"); printf("\n"); printf(" : \n"); printf("\n"); printf(" is a comma separated list of object names,\n"); printf(" meaning that layout information is supplied for those objects.\n"); printf(" if no object names are specified, the layout is applied to all objects\n"); printf(" can be:\n"); printf(" CHUNK, to apply chunking layout\n"); printf(" COMPA, to apply compact layout\n"); printf(" CONTI, to apply continuous layout\n"); printf(" is present for the chunk case only\n"); printf(" it is the chunk size of each dimension:\n"); printf(" \n"); printf("\n"); printf("-e file File with the -f and -l options (only filter and layout flags)\n"); printf("-m size Do not apply the filter to objects which size in bytes\n"); printf(" is smaller than number. If no size is specified a minimum of\n"); printf(" 1024 bytes is assumed.\n"); printf("\n"); printf("Examples of use:\n"); printf("\n"); printf("1) h5repack -i file1 -o file2 -f GZIP=1 -v\n"); printf("\n"); printf(" Applies GZIP compression to all objects in file1 and saves the output in file2\n"); printf("\n"); printf("2) h5repack -i file1 -o file2 -f dset1:SZIP=8,NN -v\n"); printf("\n"); printf(" Applies SZIP compression only to object 'dset1'\n"); printf("\n"); printf("3) h5repack -i file1 -o file2 -l dset1,dset2:CHUNK=20x10 -v\n"); printf("\n"); printf(" Applies chunked layout to objects 'dset1' and 'dset2'\n"); printf("\n"); }