/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ #include #include #include "h5repack.h" #include "h5tools_utils.h" extern char *progname; /*------------------------------------------------------------------------- * Function: init_packobject * * Purpose: initialize a pack_info_t structure * * Return: void * *------------------------------------------------------------------------- */ void init_packobject(pack_info_t *obj) { int j, k; strcpy(obj->path,"\0"); for ( j=0; jfilter[j].filtn = -1; for ( k=0; kfilter[j].cd_values[k] = -1; } obj->chunk.rank = -1; obj->refobj_id = -1; obj->layout = H5D_LAYOUT_ERROR; obj->nfilters = 0; } /*------------------------------------------------------------------------- * Function: aux_tblinsert_filter * * Purpose: auxiliary function, inserts the filter in object OBJS[ I ] * * Return: void * *------------------------------------------------------------------------- */ static void aux_tblinsert_filter(pack_opttbl_t *table, unsigned int I, filter_info_t filt) { if (table->objs[ I ].nfiltersobjs[ I ].filter[ table->objs[ I ].nfilters++ ] = filt; } else { error_msg(progname, "cannot insert the filter in this object.\ Maximum capacity exceeded\n"); } } /*------------------------------------------------------------------------- * Function: aux_tblinsert_layout * * Purpose: auxiliary function, inserts the layout in object OBJS[ I ] * * Return: void * *------------------------------------------------------------------------- */ static void aux_tblinsert_layout(pack_opttbl_t *table, unsigned int I, pack_info_t *pack) { int k; table->objs[I].layout = pack->layout; if (H5D_CHUNKED==pack->layout) { /* -2 means the NONE option, remove chunking and set the layout to contiguous */ if (pack->chunk.rank==-2) { table->objs[I].layout = H5D_CONTIGUOUS; table->objs[I].chunk.rank = -2; } /* otherwise set the chunking type */ else { table->objs[I].chunk.rank = pack->chunk.rank; for (k = 0; k < pack->chunk.rank; k++) table->objs[I].chunk.chunk_lengths[k] = pack->chunk.chunk_lengths[k]; } } } /*------------------------------------------------------------------------- * Function: aux_inctable * * Purpose: auxiliary function, increases the size of the collection by N_OBJS * * Return: 0, ok, -1, fail * *------------------------------------------------------------------------- */ static int aux_inctable(pack_opttbl_t *table, int n_objs ) { unsigned int i; table->size += n_objs; table->objs = (pack_info_t*)realloc(table->objs, table->size * sizeof(pack_info_t)); if (table->objs==NULL) { error_msg(progname, "not enough memory for options table\n"); return -1; } for (i = table->nelems; i < table->size; i++) { init_packobject(&table->objs[i]); } return 0; } /*------------------------------------------------------------------------- * Function: options_table_init * * Purpose: init options table * * Return: 0, ok, -1, fail * *------------------------------------------------------------------------- */ int options_table_init( pack_opttbl_t **tbl ) { unsigned int i; pack_opttbl_t* table = (pack_opttbl_t*) malloc(sizeof(pack_opttbl_t)); if (table==NULL) { error_msg(progname, "not enough memory for options table\n"); return -1; } table->size = 30; table->nelems = 0; table->objs = (pack_info_t*) malloc(table->size * sizeof(pack_info_t)); if (table->objs==NULL) { error_msg(progname, "not enough memory for options table\n"); return -1; } for ( i=0; isize; i++) { init_packobject(&table->objs[i]); } *tbl = table; return 0; } /*------------------------------------------------------------------------- * Function: options_table_free * * Purpose: free table memory * * Return: 0 * *------------------------------------------------------------------------- */ int options_table_free( pack_opttbl_t *table ) { free(table->objs); free(table); return 0; } /*------------------------------------------------------------------------- * Function: options_add_layout * * Purpose: add a layout option to the option list * * Return: 0, ok, -1, fail * *------------------------------------------------------------------------- */ int options_add_layout( obj_list_t *obj_list, int n_objs, pack_info_t *pack, pack_opttbl_t *table ) { unsigned int i, I; int j, added=0, found=0; /* increase the size of the collection by N_OBJS if necessary */ if (table->nelems+n_objs >= table->size) { if (aux_inctable(table,n_objs)<0) return -1; } /* search if this object is already in the table; "path" is the key */ if (table->nelems>0) { /* go tru the supplied list of names */ for (j = 0; j < n_objs; j++) { /* linear table search */ for (i = 0; i < table->nelems; i++) { /*already on the table */ if (strcmp(obj_list[j].obj,table->objs[i].path)==0) { /* already chunk info inserted for this one; exit */ if (table->objs[i].chunk.rank>0) { error_msg(progname, "chunk information already inserted for <%s>\n",obj_list[j].obj); exit(1); } /* insert the layout info */ else { aux_tblinsert_layout(table,i,pack); found=1; break; } } /* if */ } /* i */ if (found==0) { /* keep the grow in a temp var */ I = table->nelems + added; added++; strcpy(table->objs[I].path,obj_list[j].obj); aux_tblinsert_layout(table,I,pack); } /* cases where we have an already inserted name but there is a new name also example: -f dset1:GZIP=1 -l dset1,dset2:CHUNK=20x20 dset1 is already inserted, but dset2 must also be */ else if (found==1 && strcmp(obj_list[j].obj,table->objs[i].path)!=0) { /* keep the grow in a temp var */ I = table->nelems + added; added++; strcpy(table->objs[I].path,obj_list[j].obj); aux_tblinsert_layout(table,I,pack); } } /* j */ } /* first time insertion */ else { /* go tru the supplied list of names */ for (j = 0; j < n_objs; j++) { I = table->nelems + added; added++; strcpy(table->objs[I].path,obj_list[j].obj); aux_tblinsert_layout(table,I,pack); } } table->nelems+= added; return 0; } /*------------------------------------------------------------------------- * Function: options_add_filter * * Purpose: add a compression -f option to the option list * * Return: 0, ok, -1, fail * *------------------------------------------------------------------------- */ int options_add_filter(obj_list_t *obj_list, int n_objs, filter_info_t filt, pack_opttbl_t *table ) { unsigned int i, I; int j, added=0, found=0; /* increase the size of the collection by N_OBJS if necessary */ if (table->nelems+n_objs >= table->size) { if (aux_inctable(table,n_objs)<0) return -1; } /* search if this object is already in the table; "path" is the key */ if (table->nelems>0) { /* go tru the supplied list of names */ for (j = 0; j < n_objs; j++) { /* linear table search */ for (i = 0; i < table->nelems; i++) { /*already on the table */ if (strcmp(obj_list[j].obj,table->objs[i].path)==0) { /* insert */ aux_tblinsert_filter(table,i,filt); found=1; break; } /* if */ } /* i */ if (found==0) { /* keep the grow in a temp var */ I = table->nelems + added; added++; strcpy(table->objs[I].path,obj_list[j].obj); aux_tblinsert_filter(table,I,filt); } /* cases where we have an already inserted name but there is a new name also example: -l dset1:CHUNK=20x20 -f dset1,dset2:GZIP=1 dset1 is already inserted, but dset2 must also be */ else if (found==1 && strcmp(obj_list[j].obj,table->objs[i].path)!=0) { /* keep the grow in a temp var */ I = table->nelems + added; added++; strcpy(table->objs[I].path,obj_list[j].obj); aux_tblinsert_filter(table,I,filt); } } /* j */ } /* first time insertion */ else { /* go tru the supplied list of names */ for (j = 0; j < n_objs; j++) { I = table->nelems + added; added++; strcpy(table->objs[I].path,obj_list[j].obj); aux_tblinsert_filter(table,I,filt); } } table->nelems+= added; return 0; } /*------------------------------------------------------------------------- * Function: options_get_object * * Purpose: get object from table; "path" is the key * * Return: pack_info_t* OBJECT or NULL if not found; PATH is the key * *------------------------------------------------------------------------- */ pack_info_t* options_get_object( const char *path, pack_opttbl_t *table ) { unsigned int i; for ( i = 0; i < table->nelems; i++) { /* found it */ if (strcmp(table->objs[i].path,path)==0) { return (&table->objs[i]); } } return NULL; }