/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * Programmer: Robb Matzke * Thursday, July 23, 1998 * * Purpose: Support functions for the various tools. */ #ifndef H5TOOLS_H__ #define H5TOOLS_H__ #include "hdf5.h" #include "h5tools_error.h" #define ESCAPE_HTML 1 #define OPT(X,S) ((X) ? (X) : (S)) #define OPTIONAL_LINE_BREAK "\001" /* Special strings embedded in the output */ #define START_OF_DATA 0x0001 #define END_OF_DATA 0x0002 /* format for hsize_t */ #define HSIZE_T_FORMAT "%" H5_PRINTF_LL_WIDTH "u" #define H5TOOLS_DUMP_MAX_RANK H5S_MAX_RANK /* Stream macros */ #define FLUSHSTREAM(S) if(S != NULL) HDfflush(S) #define PRINTSTREAM(S, F, ...) if(S != NULL) HDfprintf(S, F, __VA_ARGS__) #define PRINTVALSTREAM(S, V) if(S != NULL) HDfprintf(S, V) #define PUTSTREAM(X,S) if(S != NULL) HDfputs(X, S); /* * Strings for output - these were duplicated from the h5dump.h * file in order to support region reference data display */ #define ATTRIBUTE "ATTRIBUTE" #define BLOCK "BLOCK" #define SUPER_BLOCK "SUPER_BLOCK" #define COMPRESSION "COMPRESSION" #define CONCATENATOR "//" #define COMPLEX "COMPLEX" #define COUNT "COUNT" #define CSET "CSET" #define CTYPE "CTYPE" #define DATA "DATA" #define DATASPACE "DATASPACE" #define EXTERNAL "EXTERNAL" #define FILENO "FILENO" #define HARDLINK "HARDLINK" #define NLINK "NLINK" #define OBJID "OBJECTID" #define OBJNO "OBJNO" #define S_SCALAR "SCALAR" #define S_SIMPLE "SIMPLE" #define S_NULL "NULL" #define SOFTLINK "SOFTLINK" #define EXTLINK "EXTERNAL_LINK" #define UDLINK "USERDEFINED_LINK" #define START "START" #define STRIDE "STRIDE" #define STRSIZE "STRSIZE" #define STRPAD "STRPAD" #define SUBSET "SUBSET" #define FILTERS "FILTERS" #define DEFLATE "COMPRESSION DEFLATE" #define DEFLATE_LEVEL "LEVEL" #define SHUFFLE "PREPROCESSING SHUFFLE" #define FLETCHER32 "CHECKSUM FLETCHER32" #define SZIP "COMPRESSION SZIP" #define NBIT "COMPRESSION NBIT" #define SCALEOFFSET "COMPRESSION SCALEOFFSET" #define SCALEOFFSET_MINBIT "MIN BITS" #define STORAGE_LAYOUT "STORAGE_LAYOUT" #define CONTIGUOUS "CONTIGUOUS" #define COMPACT "COMPACT" #define CHUNKED "CHUNKED" #define EXTERNAL_FILE "EXTERNAL_FILE" #define FILLVALUE "FILLVALUE" #define FILE_CONTENTS "FILE_CONTENTS" #define PACKED_BITS "PACKED_BITS" #define PACKED_OFFSET "OFFSET" #define PACKED_LENGTH "LENGTH" #define VDS_VIRTUAL "VIRTUAL" #define VDS_MAPPING "MAPPING" #define VDS_SOURCE "SOURCE" #define VDS_REG_HYPERSLAB "SELECTION REGULAR_HYPERSLAB" #define VDS_IRR_HYPERSLAB "SELECTION IRREGULAR_HYPERSLAB" #define VDS_POINT "POINT" #define VDS_SRC_FILE "FILE" #define VDS_SRC_DATASET "DATASET" #define VDS_NONE "SELECTION NONE" #define VDS_ALL "SELECTION ALL" #define BEGIN "{" #define END "}" /* * dump structure for output - this was duplicated from the h5dump.h * file in order to support region reference data display */ typedef struct h5tools_dump_header_t { const char *name; const char *filebegin; const char *fileend; const char *bootblockbegin; const char *bootblockend; const char *groupbegin; const char *groupend; const char *datasetbegin; const char *datasetend; const char *attributebegin; const char *attributeend; const char *datatypebegin; const char *datatypeend; const char *dataspacebegin; const char *dataspaceend; const char *databegin; const char *dataend; const char *softlinkbegin; const char *softlinkend; const char *extlinkbegin; const char *extlinkend; const char *udlinkbegin; const char *udlinkend; const char *subsettingbegin; const char *subsettingend; const char *startbegin; const char *startend; const char *stridebegin; const char *strideend; const char *countbegin; const char *countend; const char *blockbegin; const char *blockend; const char *fileblockbegin; const char *fileblockend; const char *bootblockblockbegin; const char *bootblockblockend; const char *groupblockbegin; const char *groupblockend; const char *datasetblockbegin; const char *datasetblockend; const char *attributeblockbegin; const char *attributeblockend; const char *datatypeblockbegin; const char *datatypeblockend; const char *dataspaceblockbegin; const char *dataspaceblockend; const char *datablockbegin; const char *datablockend; const char *softlinkblockbegin; const char *softlinkblockend; const char *extlinkblockbegin; const char *extlinkblockend; const char *udlinkblockbegin; const char *udlinkblockend; const char *strblockbegin; const char *strblockend; const char *enumblockbegin; const char *enumblockend; const char *structblockbegin; const char *structblockend; const char *vlenblockbegin; const char *vlenblockend; const char *subsettingblockbegin; const char *subsettingblockend; const char *startblockbegin; const char *startblockend; const char *strideblockbegin; const char *strideblockend; const char *countblockbegin; const char *countblockend; const char *blockblockbegin; const char *blockblockend; const char *dataspacedescriptionbegin; const char *dataspacedescriptionend; const char *dataspacedimbegin; const char *dataspacedimend; const char *virtualselectionbegin; const char *virtualselectionend; const char *virtualselectionblockbegin; const char *virtualselectionblockend; const char *virtualfilenamebegin; const char *virtualfilenameend; const char *virtualdatasetnamebegin; const char *virtualdatasetnameend; } h5tools_dump_header_t; /* Forward declaration (see declaration in h5tools_str.c) */ struct H5LD_memb_t; /* * Information about how to format output. */ typedef struct h5tool_format_t { /* * Fields associated with formatting numeric data. If a datatype matches * multiple formats based on its size, then the first applicable format * from this list is used. However, if `raw' is non-zero then dump all * data in hexadecimal format without translating from what appears on * disk. * * raw: If set then print all data as hexadecimal without * performing any conversion from disk. * * fmt_raw: The printf() format for each byte of raw data. The * default is `%02x'. * * fmt_int: The printf() format to use when rendering data which is * typed `int'. The default is `%d'. * * fmt_uint: The printf() format to use when rendering data which is * typed `unsigned'. The default is `%u'. * * fmt_schar: The printf() format to use when rendering data which is * typed `signed char'. The default is `%d'. This format is * used ony if the `ascii' field is zero. * * fmt_uchar: The printf() format to use when rendering data which is * typed `unsigned char'. The default is `%u'. This format * is used only if the `ascii' field is zero. * * fmt_short: The printf() format to use when rendering data which is * typed `short'. The default is `%d'. * * fmt_ushort: The printf() format to use when rendering data which is * typed `unsigned short'. The default is `%u'. * * fmt_long: The printf() format to use when rendering data which is * typed `long'. The default is `%ld'. * * fmt_ulong: The printf() format to use when rendering data which is * typed `unsigned long'. The default is `%lu'. * * fmt_llong: The printf() format to use when rendering data which is * typed `long long'. The default depends on what printf() * format is available to print this datatype. * * fmt_ullong: The printf() format to use when rendering data which is * typed `unsigned long long'. The default depends on what * printf() format is available to print this datatype. * * fmt_double: The printf() format to use when rendering data which is * typed `double'. The default is `%g'. * * fmt_float: The printf() format to use when rendering data which is * typed `float'. The default is `%g'. * * ascii: If set then print 1-byte integer values as an ASCII * character (no quotes). If the character is one of the * standard C escapes then print the escaped version. If * the character is unprintable then print a 3-digit octal * escape. If `ascii' is zero then then 1-byte integers are * printed as numeric values. The default is zero. * * str_locale: Determines how strings are printed. If zero then strings * are printed like in C except. If set to ESCAPE_HTML then * strings are printed using HTML encoding where each * character not in the class [a-zA-Z0-9] is substituted * with `%XX' where `X' is a hexadecimal digit. * * str_repeat: If set to non-zero then any character value repeated N * or more times is printed as 'C'*N * * Numeric data is also subject to the formats for individual elements. */ hbool_t raw; const char *fmt_raw; const char *fmt_int; const char *fmt_uint; const char *fmt_schar; const char *fmt_uchar; const char *fmt_short; const char *fmt_ushort; const char *fmt_long; const char *fmt_ulong; const char *fmt_llong; const char *fmt_ullong; const char *fmt_double; const char *fmt_float; int ascii; int str_locale; int str_repeat; /* * Fields associated with compound array members. * * pre: A string to print at the beginning of each array. The * default value is the left square bracket `['. * * sep: A string to print between array values. The default * value is a ",\001" ("\001" indicates an optional line * break). * * suf: A string to print at the end of each array. The default * value is a right square bracket `]'. * * linebreaks: a boolean value to determine if we want to break the line * after each row of an array. */ const char *arr_pre; const char *arr_sep; const char *arr_suf; int arr_linebreak; /* * Fields associated with compound data types. * * name: How the name of the struct member is printed in the * values. By default the name is not printed, but a * reasonable setting might be "%s=" which prints the name * followed by an equal sign and then the value. * * sep: A string that separates one member from another. The * default is ", \001" (the \001 indicates an optional * line break to allow structs to span multiple lines of * output). * * pre: A string to print at the beginning of a compound type. * The default is a left curly brace. * * suf: A string to print at the end of each compound type. The * default is right curly brace. * * end: a string to print after we reach the last element of * each compound type. prints out before the suf. * * listv: h5watch: vector containing info about the list of compound fields to be printed. */ const char *cmpd_name; const char *cmpd_sep; const char *cmpd_pre; const char *cmpd_suf; const char *cmpd_end; const struct H5LD_memb_t **cmpd_listv; /* * Fields associated with vlen data types. * * sep: A string that separates one member from another. The * default is ", \001" (the \001 indicates an optional * line break to allow structs to span multiple lines of * output). * * pre: A string to print at the beginning of a vlen type. * The default is a left parentheses. * * suf: A string to print at the end of each vlen type. The * default is a right parentheses. * * end: a string to print after we reach the last element of * each compound type. prints out before the suf. */ const char *vlen_sep; const char *vlen_pre; const char *vlen_suf; const char *vlen_end; /* * Fields associated with the individual elements. * * fmt: A printf(3c) format to use to print the value string * after it has been rendered. The default is "%s". * * suf1: This string is appended to elements which are followed by * another element whether the following element is on the * same line or the next line. The default is a comma. * * suf2: This string is appended (after `suf1') to elements which * are followed on the same line by another element. The * default is a single space. */ const char *elmt_fmt; const char *elmt_suf1; const char *elmt_suf2; /* * Fields associated with the index values printed at the left edge of * each line of output. * * n_fmt: Each index value is printed according to this printf(3c) * format string which should include a format for a long * integer. The default is "%lu". * * sep: Each integer in the index list will be separated from the * others by this string, which defaults to a comma. * * fmt: After the index values are formated individually and * separated from one another by some string, the entire * resulting string will be formated according to this * printf(3c) format which should include a format for a * character string. The default is "%s". */ const char *idx_n_fmt; /*index number format */ const char *idx_sep; /*separator between numbers */ const char *idx_fmt; /*entire index format */ /* * Fields associated with entire lines. * * ncols: Number of columns per line defaults to 80. * * per_line: If this field has a positive value then every Nth element * will be printed at the beginning of a line. * * pre: Each line of output contains an optional prefix area * before the data. This area can contain the index for the * first datum (represented by `%s') as well as other * constant text. The default value is `%s'. * * 1st: This is the format to print at the beginning of the first * line of output. The default value is the current value of * `pre' described above. * * cont: This is the format to print at the beginning of each line * which was continued because the line was split onto * multiple lines. This often happens with compound * data which is longer than one line of output. The default * value is the current value of the `pre' field * described above. * * suf: This character string will be appended to each line of * output. It should not contain line feeds. The default * is the empty string. * * sep: A character string to be printed after every line feed * defaulting to the empty string. It should end with a * line feed. * * multi_new: Indicates the algorithm to use when data elements tend to * occupy more than one line of output. The possible values * are (zero is the default): * * 0: No consideration. Each new element is printed * beginning where the previous element ended. * * 1: Print the current element beginning where the * previous element left off. But if that would result * in the element occupying more than one line and it * would only occupy one line if it started at the * beginning of a line, then it is printed at the * beginning of the next line. * * multi_new: If an element is continued onto additional lines then * should the following element begin on the next line? The * default is to start the next element on the same line * unless it wouldn't fit. * * indentlevel: a string that shows how far to indent if extra spacing * is needed. dumper uses it. */ unsigned line_ncols; /*columns of output */ size_t line_per_line; /*max elements per line */ const char *line_pre; /*prefix at front of each line */ const char *line_1st; /*alternate pre. on first line */ const char *line_cont; /*alternate pre. on continuation*/ const char *line_suf; /*string to append to each line */ const char *line_sep; /*separates lines */ int line_multi_new; /*split multi-line outputs? */ const char *line_indent; /*for extra identation if we need it*/ /*used to skip the first set of checks for line length*/ int skip_first; /*flag used to hide or show the file number for obj refs*/ int obj_hidefileno; /*string used to format the output for the obje refs*/ const char *obj_format; /*flag used to hide or show the file number for dataset regions*/ int dset_hidefileno; /*string used to format the output for the dataset regions*/ const char *dset_format; const char *dset_blockformat_pre; const char *dset_ptformat_pre; const char *dset_ptformat; /*print array indices in output matrix */ int pindex; /*escape non printable characters */ int do_escape; } h5tool_format_t; typedef struct h5tools_context_t { size_t cur_column; /*current column for output */ size_t cur_elmt; /*current element/output line */ int need_prefix; /*is line prefix needed? */ unsigned ndims; /*dimensionality */ hsize_t p_min_idx[H5S_MAX_RANK]; /*min selected index */ hsize_t p_max_idx[H5S_MAX_RANK]; /*max selected index */ int prev_multiline; /*was prev datum multiline? */ size_t prev_prefix_len; /*length of previous prefix */ int continuation; /*continuation of previous data?*/ hsize_t size_last_dim; /*the size of the last dimension, *needed so we can break after each *row */ int indent_level; /*the number of times we need some *extra indentation */ int default_indent_level; /*this is used when the indent level gets changed */ hsize_t acc[H5S_MAX_RANK]; /* accumulator position */ hsize_t pos[H5S_MAX_RANK]; /* matrix position */ hsize_t sm_pos; /* current stripmine element position */ struct H5LD_memb_t **cmpd_listv; /* h5watch: vector containing info about the list of compound fields to be printed */ } h5tools_context_t; typedef struct subset_d { hsize_t *data; unsigned int len; } subset_d; /* a structure to hold the subsetting particulars for a dataset */ struct subset_t { subset_d start; subset_d stride; subset_d count; subset_d block; }; /* The following include, h5tools_str.h, must be after the * above stucts are defined. There is a dependency in the following * include that hasn't been identified yet. */ #include "h5tools_str.h" H5TOOLS_DLLVAR h5tool_format_t h5tools_dataformat; H5TOOLS_DLLVAR const h5tools_dump_header_t h5tools_standardformat; H5TOOLS_DLLVAR const h5tools_dump_header_t* h5tools_dump_header_format; #ifdef __cplusplus extern "C" { #endif H5TOOLS_DLLVAR int packed_bits_num; /* number of packed bits to display */ H5TOOLS_DLLVAR int packed_data_offset; /* offset of packed bits to display */ H5TOOLS_DLLVAR int packed_data_length; /* lengtht of packed bits to display */ H5TOOLS_DLLVAR unsigned long long packed_data_mask; /* mask in which packed bits to display */ H5TOOLS_DLLVAR FILE *rawattrstream; /* output stream for raw attribute data */ H5TOOLS_DLLVAR FILE *rawdatastream; /* output stream for raw data */ H5TOOLS_DLLVAR FILE *rawinstream; /* input stream for raw input */ H5TOOLS_DLLVAR FILE *rawoutstream; /* output stream for raw output */ H5TOOLS_DLLVAR FILE *rawerrorstream; /* output stream for raw error */ H5TOOLS_DLLVAR int bin_output; /* binary output */ H5TOOLS_DLLVAR int bin_form; /* binary form */ H5TOOLS_DLLVAR int region_output; /* region output */ H5TOOLS_DLLVAR int oid_output; /* oid output */ H5TOOLS_DLLVAR int data_output; /* data output */ H5TOOLS_DLLVAR int attr_data_output; /* attribute data output */ /* Strings for output */ #define H5_TOOLS_GROUP "GROUP" #define H5_TOOLS_DATASET "DATASET" #define H5_TOOLS_DATATYPE "DATATYPE" /* Definitions of useful routines */ H5TOOLS_DLL void h5tools_init(void); H5TOOLS_DLL void h5tools_close(void); H5TOOLS_DLL int h5tools_set_data_output_file(const char *fname, int is_bin); H5TOOLS_DLL int h5tools_set_attr_output_file(const char *fname, int is_bin); H5TOOLS_DLL int h5tools_set_input_file(const char *fname, int is_bin); H5TOOLS_DLL int h5tools_set_output_file(const char *fname, int is_bin); H5TOOLS_DLL int h5tools_set_error_file(const char *fname, int is_bin); H5TOOLS_DLL hid_t h5tools_fopen(const char *fname, unsigned flags, hid_t fapl, const char *driver, char *drivername, size_t drivername_len); H5TOOLS_DLL hid_t h5tools_get_native_type(hid_t type); H5TOOLS_DLL hid_t h5tools_get_little_endian_type(hid_t type); H5TOOLS_DLL hid_t h5tools_get_big_endian_type(hid_t type); H5TOOLS_DLL htri_t h5tools_detect_vlen(hid_t tid); H5TOOLS_DLL htri_t h5tools_detect_vlen_str(hid_t tid); H5TOOLS_DLL hbool_t h5tools_is_obj_same(hid_t loc_id1, const char *name1, hid_t loc_id2, const char *name2); H5TOOLS_DLL void init_acc_pos(h5tools_context_t *ctx, hsize_t *dims); H5TOOLS_DLL hbool_t h5tools_is_zero(const void *_mem, size_t size); H5TOOLS_DLL int h5tools_canreadf(const char* name, hid_t dcpl_id); H5TOOLS_DLL int h5tools_can_encode(H5Z_filter_t filtn); H5TOOLS_DLL void h5tools_simple_prefix(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hsize_t elmtno, int secnum); H5TOOLS_DLL void h5tools_region_simple_prefix(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, hsize_t elmtno, hsize_t *ptdata, int secnum); H5TOOLS_DLL int render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t nelmts); H5TOOLS_DLL int render_bin_output_region_data_blocks(hid_t region_id, FILE *stream, hid_t container, int ndims, hid_t type_id, hssize_t nblocks, hsize_t *ptdata); H5TOOLS_DLL hbool_t render_bin_output_region_blocks(hid_t region_space, hid_t region_id, FILE *stream, hid_t container); H5TOOLS_DLL int render_bin_output_region_data_points(hid_t region_space, hid_t region_id, FILE* stream, hid_t container, int ndims, hid_t type_id, hssize_t npoints); H5TOOLS_DLL hbool_t render_bin_output_region_points(hid_t region_space, hid_t region_id, FILE *stream, hid_t container); H5TOOLS_DLL hbool_t h5tools_render_element(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx, h5tools_str_t *buffer, hsize_t *curr_pos, size_t ncols, hsize_t local_elmt_counter, hsize_t elmt_counter); H5TOOLS_DLL hbool_t h5tools_render_region_element(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx/*in,out*/, h5tools_str_t *buffer/*string into which to render */, hsize_t *curr_pos/*total data element position*/, size_t ncols, hsize_t *ptdata, hsize_t local_elmt_counter/*element counter*/, hsize_t elmt_counter); #ifdef __cplusplus } #endif #endif /* H5TOOLS_H__ */