/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the COPYING file, which can be found at the root of the source code * * distribution tree, or in https://www.hdfgroup.org/licenses. * * If you do not have access to either file, you may request a copy from * * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* For generating files for verifying h5repack with external storage. . . * * Each case file should follow the format of: * + h5repack_.h5 * + h5repack__ex.h5 * + h5repack__ex-.dat * ...where NAME idenfities the type, and N is a positive decimal number; * multiple external files (*.dat) are allowed per file, but they must * follow the pattern and be in contiguous numerical sequence starting at 0. * * Each file typename must be added to the listing for * `VERIFY_EXTERNAL_CONSOLIDATION` in h5repack.sh * * There is no restriction on the name, number, or structure of datasets and * groups in HDF5 file. * * The included datatypes should be more than adequate to verify the correctness * of the behavior -- if one type can be consolidated from external storage, * then they all can. */ #include "hdf5.h" #include "H5private.h" #define MAX_NAME_SIZE 256 #define FILE_INT32LE_1 "h5repack_int32le_1d" #define FILE_INT32LE_2 "h5repack_int32le_2d" #define FILE_INT32LE_3 "h5repack_int32le_3d" #define FILE_UINT8BE "h5repack_uint8be" #define FILE_F32LE "h5repack_f32le" #define H5REPACKGENTEST_OOPS \ { \ ret_value = -1; \ goto done; \ } #define H5REPACKGENTEST_COMMON_CLEANUP(dcpl, file, space) \ { \ if ((dcpl) != H5P_DEFAULT && (dcpl) != H5I_INVALID_HID) { \ (void)H5Pclose((dcpl)); \ } \ if ((file) != H5I_INVALID_HID) { \ (void)H5Fclose((file)); \ } \ if ((space) != H5I_INVALID_HID) { \ (void)H5Sclose((space)); \ } \ } struct external_def { hsize_t type_size; unsigned n_elts_per_file; unsigned n_elts_total; }; /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Helper function to create and write a dataset to file. * Returns 0 on success, -1 on failure. */ static int make_dataset(hid_t file_id, const char *dset_name, hid_t mem_type_id, hid_t space_id, hid_t dcpl_id, void *wdata) { hid_t dset_id = H5I_INVALID_HID; int ret_value = 0; dset_id = H5Dcreate2(file_id, dset_name, mem_type_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT); if (dset_id == H5I_INVALID_HID) H5REPACKGENTEST_OOPS; if (H5Dwrite(dset_id, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata) < 0) H5REPACKGENTEST_OOPS; done: if (dset_id != H5I_INVALID_HID) (void)H5Dclose(dset_id); return ret_value; } /* end make_dataset() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Helper function to populate the DCPL external storage list. * Creates external files for the DCPL, with each file name following the * convention "_ex-.dat". Will append `n_external_files` to * the filename list, with each file having space for `n_elts` items of the * type (of size `elt_size`). The numeric inputs are not sanity-checked. * Returns 0 on success, -1 on failure. */ static int set_dcpl_external_list(hid_t dcpl, const char *filename, unsigned n_elts_per_file, unsigned n_elts_total, hsize_t elt_size) { char name[MAX_NAME_SIZE]; unsigned n_external_files = 0; unsigned i = 0; if (NULL == filename || '\0' == *filename) return -1; n_external_files = n_elts_total / n_elts_per_file; if (n_elts_total != (n_external_files * n_elts_per_file)) return -1; for (i = 0; i < n_external_files; i++) { if (HDsnprintf(name, MAX_NAME_SIZE, "%s_ex-%u.dat", filename, i) >= MAX_NAME_SIZE) return -1; if (H5Pset_external(dcpl, name, 0, n_elts_per_file * elt_size) < 0) return -1; } return 0; } /* end set_dcpl_external_list() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Generalized utility function to write a file with the specified data and * dataset configuration. If `ext` is provided, will attempt to use external * storage. * Returns 0 on success, -1 on failure. */ static int make_file(const char *basename, struct external_def *ext, hid_t type_id, hsize_t rank, hsize_t *dims, void *wdata) { char filename[MAX_NAME_SIZE]; hid_t file_id = H5I_INVALID_HID; hid_t dcpl_id = H5P_DEFAULT; hid_t space_id = H5I_INVALID_HID; int ret_value = 0; if (HDsnprintf(filename, MAX_NAME_SIZE, "%s%s.h5", basename, (NULL != ext) ? "_ex" : "") >= MAX_NAME_SIZE) H5REPACKGENTEST_OOPS; if (NULL != ext) { dcpl_id = H5Pcreate(H5P_DATASET_CREATE); if (dcpl_id == H5I_INVALID_HID) H5REPACKGENTEST_OOPS; if (set_dcpl_external_list(dcpl_id, basename, ext->n_elts_per_file, ext->n_elts_total, ext->type_size) < 0) H5REPACKGENTEST_OOPS; } space_id = H5Screate_simple((int)rank, dims, NULL); if (space_id == H5I_INVALID_HID) H5REPACKGENTEST_OOPS; file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); if (file_id == H5I_INVALID_HID) H5REPACKGENTEST_OOPS; if (make_dataset(file_id, "dset", type_id, space_id, dcpl_id, wdata) < 0) H5REPACKGENTEST_OOPS; done: H5REPACKGENTEST_COMMON_CLEANUP(dcpl_id, file_id, space_id); return ret_value; } /* end make_file() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Returns 0 on success, -1 on failure. */ static int generate_int32le_1d(hbool_t external) { int32_t wdata[12]; hsize_t dims[] = {12}; struct external_def *def_ptr = NULL; struct external_def def = {(hsize_t)sizeof(int32_t), 6, 12}; int32_t n = 0; int ret_value = 0; /* Generate values */ for (n = 0; n < 12; n++) { wdata[n] = n - 6; } def_ptr = (TRUE == external) ? (&def) : NULL; if (make_file(FILE_INT32LE_1, def_ptr, H5T_STD_I32LE, 1, dims, wdata) < 0) ret_value = -1; return ret_value; } /* end generate_int32le_1d() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Returns 0 on success, -1 on failure. */ static int generate_int32le_2d(hbool_t external) { int32_t wdata[64]; hsize_t dims[] = {8, 8}; struct external_def *def_ptr = NULL; struct external_def def = {(hsize_t)sizeof(int32_t), 64, 64}; int32_t n = 0; int ret_value = 0; /* Generate values */ for (n = 0; n < 64; n++) { wdata[n] = n - 32; } def_ptr = (TRUE == external) ? (&def) : NULL; if (make_file(FILE_INT32LE_2, def_ptr, H5T_STD_I32LE, 2, dims, wdata) < 0) ret_value = -1; return ret_value; } /* end generate_int32le_2d() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Returns 0 on success, -1 on failure. */ static int generate_int32le_3d(hbool_t external) { hsize_t dims[] = {8, 8, 8}; int32_t wdata[512]; /* 8^3, from dims */ struct external_def *def_ptr = NULL; struct external_def def = {(hsize_t)sizeof(int32_t), 512, 512}; int32_t n = 0; int i = 0; int j = 0; int k = 0; int ret_value = 0; /* generate values, alternating positive and negative */ for (i = 0, n = 0; (hsize_t)i < dims[0]; i++) { for (j = 0; (hsize_t)j < dims[1]; j++) { for (k = 0; (hsize_t)k < dims[2]; k++, n++) { wdata[n] = (k + j * 512 + i * 4096) * ((n & 1) ? (-1) : (1)); } } } def_ptr = (TRUE == external) ? (&def) : NULL; if (make_file(FILE_INT32LE_3, def_ptr, H5T_STD_I32LE, 3, dims, wdata) < 0) ret_value = -1; return ret_value; } /* end generate_int32le_3d() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Returns 0 on success, -1 on failure. */ static int generate_uint8be(hbool_t external) { hsize_t dims[] = {4, 8, 8}; uint8_t wdata[256]; /* 4*8*8, from dims */ struct external_def *def_ptr = NULL; struct external_def def = {(hsize_t)sizeof(uint8_t), 64, 256}; uint8_t n = 0; int i = 0; int j = 0; int k = 0; int ret_value = 0; /* Generate values, ping-pong from ends of range */ for (i = 0, n = 0; (hsize_t)i < dims[0]; i++) { for (j = 0; (hsize_t)j < dims[1]; j++) { for (k = 0; (hsize_t)k < dims[2]; k++, n++) { wdata[n] = (uint8_t)((n & 1) ? -n : n); } } } def_ptr = (TRUE == external) ? (&def) : NULL; if (make_file(FILE_UINT8BE, def_ptr, H5T_STD_U8BE, 3, dims, wdata) < 0) ret_value = -1; return ret_value; } /* end generate_uint8be() */ /* - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - * Returns 0 on success, -1 on failure. */ static int generate_f32le(hbool_t external) { hsize_t dims[] = {12, 6}; float wdata[72]; /* 12*6, from dims */ struct external_def *def_ptr = NULL; struct external_def def = {(hsize_t)sizeof(float), 72, 72}; float n = 0; int i = 0; int j = 0; int k = 0; int ret_value = 0; /* Generate values */ for (i = 0, k = 0, n = 0; (hsize_t)i < dims[0]; i++) { for (j = 0; (hsize_t)j < dims[1]; j++, k++, n++) { wdata[k] = n * 801.1F * ((k % 5 == 1) ? (-1) : (1)); } } def_ptr = (TRUE == external) ? (&def) : NULL; if (make_file(FILE_F32LE, def_ptr, H5T_IEEE_F32LE, 2, dims, wdata) < 0) ret_value = -1; return ret_value; } /* end generate_f32le() */ /* ---------------------------------------------------------------------------- * Create files. * Return 0 on success, nonzero on failure. */ int main(void) { int i = 0; for (i = 0; i < 2; i++) { hbool_t external = (i & 1) ? TRUE : FALSE; if (generate_int32le_1d(external) < 0) printf("A generate_int32le_1d failed!\n"); if (generate_int32le_2d(external) < 0) printf("A generate_int32le_2d failed!\n"); if (generate_int32le_3d(external) < 0) printf("A generate_int32le_3d failed!\n"); if (generate_uint8be(external) < 0) printf("A generate_uint8be failed!\n"); if (generate_f32le(external) < 0) printf("A generate_f32le failed!\n"); } /* end for external data storage or not */ return EXIT_SUCCESS; } /* end main() */