1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
|
#!/bin/sh
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including
# terms governing use, modification, and redistribution, is contained in
# the files COPYING and Copyright.html. COPYING can be found at the root
# of the source code distribution tree; Copyright.html can be found at the
# root level of an installed copy of the electronic HDF5 document set and
# is linked from the top-level documents page. It can also be found at
# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
# access to either file, you may request a copy from help@hdfgroup.org.
#
# Build HDF5 library by doing configure, make, and tests.
# Usage: See USAGE()
# Programmer: Albert Cheng
# Creation date: Jul 9, 2003
# Some handy definitions
USAGE()
{
cat <<EOF
Buildhdf5 builds the HDF5 library by running configure, make and make check.
It skips the configure part if one has been done already. In effect, one
can continue from a previous build.
Command Syntax
==============
buildhdf5 [-config] [-szlib] [-help] [-n] [-srcdir dir] [-fortran] [-cxx] [-pp] config-arguments ...
-config: run configure only. [default to do build too]
-szlib: configure in the szlib option
-help: show this help page
-n: no execution, just show commands
-srcdir: use dir as the source directory
[Note: this is different from --srcdir
which will be passed to configure]
-fortran: add --enable-fortran
-cxx: add --enable-cxx
-pp: add --enable-parallel
all other arguments are passed to configure
Configure in place or by srcdir
===============================
By default, the command looks for the configure command in
'.' and then '../hdf5'. When it finds it, it uses it to do
the configure part. In effect, if ./configure is found, it
does the build in place. If it finds ../hdf5/configure, it
does the --srcdir (that is separated source) build. Therefore,
if you have the following structure setup, you can run multiple
hosts building simultantously using a common source code.
hdf5_v1.7/hdf5 # holds the source
.../sunbox # for SunOS
.../linux # for Linux
.../linuxpp # for Linux parallel
EOF
}
TIMESTAMP()
{
echo "=====" "`date`" "====="
}
QUIT()
{
# print the closing time
TIMESTAMP
}
# Do one step bracketed with time stamps
# The '< /dev/null' is needed to prevent some applications like MPI
# jobs blocked for reading when they read stdin unnecessary.
STEP()
{
banner="$1"
command="$2"
resultfile="$3"
echo "$banner"
(TIMESTAMP; nerror=0 ;
echo "eval $command"
eval $command || nerror=1 ;
TIMESTAMP; exit $nerror) < /dev/null >> "$resultfile" 2>&1
if [ $? -ne 0 ]; then
echo "error in '$banner'. buildhdf5 aborted."
exit 1
fi
}
# Try locate the SZLIB.
# This is a hack because there is no consistent szlib pathname.
LOCATE_SZLIB()
{
# Try to guess what domain I am in.
if [ -d /usr/hdf/bin ]; then
# I am in an THG host.
mydomain=thg
elif [ -d /afs/ncsa/projects/hdf/packages ]; then
# I am in an NCSA host that has AFS.
mydomain=ncsa
else
mydomain=unknown
fi
case $mydomain in
thg)
# THG hosts
OS=`uname -s`
echo OS=$OS
case "$OS" in
Linux)
case `uname -m` in
i686) # 32 bits
szlibpaths="/home/packages/szip/static/encoder/Linux2.6-gcc"
;;
x86_64) # 64 bits
szlibpaths="/home/packages/szip/static/encoder/Linux2.6-x86_64-gcc"
;;
*)
# Don't know. Give a shot at standard places.
szlibpaths="/usr/hdf /usr/local"
;;
esac
;;
SunOS)
szlibpaths="/home/packages/szip/static/encoder/SunOS-5.10"
;;
FreeBSD)
case `uname -m` in
i386) # 32 bits
szlibpaths="/home/packages/szip/static/encoder/FreeBSD"
;;
amd64) # 64 bits
szlibpaths="/home/packages/szip/static/encoder/FreeBSD-64"
;;
*)
# Don't know. Give a shot at standard places.
szlibpaths="/usr/hdf /usr/local"
;;
esac
;;
*)
# Don't know. Give a shot at standard places.
szlibpaths="/usr/hdf /usr/local"
;;
esac
;; # end of case thg
ncsa)
# ncsa hosts
OS=`uname -s`
echo OS=$OS
case "$OS" in
HP-UX)
szlibpaths="/afs/ncsa/projects/hdf/packages/szip_new/HPUX-11.00"
;;
Linux)
case `uname -m` in
i686)
szlibpaths="/afs/ncsa/projects/hdf/packages/szip_new/Linux2.4"
;;
*)
# Don't know. Give a shot at standard places.
szlibpaths="/usr/ncsa /usr/sdt"
;;
esac
;;
SunOS)
szlibpaths="/afs/ncsa/projects/hdf/packages/szip_new/SunOS_5.8"
;;
*)
# Don't know. Give a shot at standard places.
szlibpaths="/usr/ncsa /usr/sdt"
;;
esac
;; # end of case ncsa
unknown)
# Unknow domain. Give a shot at the some standard places.
szlibpaths="/usr/local"
;;
esac # end of case $mydomain
echo szlibpaths=$szlibpaths
for x in $szlibpaths dummy; do
if [ $x != dummy -a -f $x/include/szlib.h -a -f $x/lib/libsz.a ]; then
WITH_SZLIB="--with-szlib=$x"
break
fi
done
echo WITH_SZLIB="$WITH_SZLIB"
}
# Configure. Default to do --srcdir.
CONFIG()
{
CMD="$SRCDIR/configure $*"
echo $CMD
if [ "$NOEXEC" != 'noexec' ]; then
$CMD
else
true # set exit code as 0
fi
}
# Main body
TIMESTAMP
trap QUIT 0
#
# setup
#
MAKE=${MAKE:-'gmake'}
export MAKE
CONFIG_CMD="CONFIG"
CONFIG_OP= # configure options
CONFIG_ONLY=no # default is configure and build
NOEXEC= # default to execute commands
SRCDIRLIST=". ../hdf5" # places to look for configure
nerror=0
# parse some options
while [ $# -gt 0 ]; do
case "$1" in
-config)
# do configure only
CONFIG_ONLY=yes
;;
-szlib)
LOCATE_SZLIB
CONFIG_OP="$CONFIG_OP $WITH_SZLIB"
;;
-help)
USAGE
exit 0
;;
-n)
NOEXEC='noexec'
;;
-srcdir)
shift
SRCDIRLIST="$1"
;;
-cxx)
CONFIG_OP="$CONFIG_OP --enable-cxx"
;;
-fortran)
CONFIG_OP="$CONFIG_OP --enable-fortran"
;;
-pp)
CONFIG_OP="$CONFIG_OP --enable-parallel"
;;
*) # pass it as a configure option
CONFIG_OP="$CONFIG_OP $1"
;;
esac
shift
done
# Figure out if srcdir is wished.
# Make sure we are at the library root level
# by checking couple typical files. Not bullet-proof.
for SRCDIR in $SRCDIRLIST dummy; do
if [ x-$SRCDIR = x-dummy ]; then
break
fi
if [ -d $SRCDIR/src -a -d $SRCDIR/config -a -f $SRCDIR/configure ]
then
break
fi
done
if [ x-$SRCDIR = x-dummy ]; then
echo "Could not find the source dir or configure script. Abort."
exit 1
fi
# Configure
# no configure if already done.
if [ ! -f config.status ]; then
STEP "Configure HDF5..." "$CONFIG_CMD $CONFIG_OP" "#config"
else
STEP "Configure Skipped" "echo Configure Skipped" "#config"
fi
if [ x-$CONFIG_ONLY = x-yes ]; then
exit 0
fi
# Compile
STEP "Make HDF5..." "$MAKE" "#make"
# Serial tests
STEP "Testing HDF5 serial parts..." "$MAKE check-s" "#test-s"
# Parallel tests
STEP "Testing HDF5 parallel parts..." "$MAKE check-p" "#test-p"
# all done
echo "No Errors encountered"
|
