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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include <string>
#include "H5Include.h"
#include "H5RefCounter.h"
#include "H5Exception.h"
#include "H5IdComponent.h"
#include "H5PropList.h"
#include "H5Object.h"
#include "H5FaccProp.h"
#include "H5FcreatProp.h"
#include "H5DxferProp.h"
#include "H5DcreatProp.h"
#include "H5CommonFG.h"
#include "H5Group.h"
#include "H5AbstractDs.h"
#include "H5DataSpace.h"
#include "H5DataSet.h"
#include "H5File.h"
#include "H5Alltypes.h"
// There are a few comments that are common to most of the functions
// defined in this file so they are listed here.
// - getLocId is called by all functions, that call a C API, to get
// the location id, which can be either a file id or a group id.
// This function is pure virtual and it's up to H5File and Group
// to call the right getId() - although, as the structure of the
// library at this time, getId() is basically the IdComponent::getId()
// - when a failure returned by the C API, the functions will call
// throwException, which is a pure virtual function and is implemented
// by H5File to throw a FileIException and by Group to throw a
// GroupIException.
// December 2000
#ifndef H5_NO_NAMESPACE
namespace H5 {
#endif
// Creates a new group at this location which can be a file or another group.
Group CommonFG::createGroup( const string& name, size_t size_hint ) const
{
return( createGroup( name.c_str(), size_hint ));
}
Group CommonFG::createGroup( const char* name, size_t size_hint ) const
{
// Call C routine H5Gcreate to create the named group, giving the
// location id which can be a file id or a group id
hid_t group_id = H5Gcreate( getLocId(), name, size_hint );
// If the creation of the group failed, throw an exception
if( group_id <= 0 )
{
throwException("createGroup", "H5Gcreate failed");
}
// No failure, create and return the Group object
Group group( group_id );
return( group );
}
// Opens an existing group in a location which can be a file or another group
Group CommonFG::openGroup( const string& name ) const
{
return( openGroup( name.c_str() ));
}
Group CommonFG::openGroup( const char* name ) const
{
// Call C routine H5Gopen to open the named group, giving the
// location id which can be a file id or a group id
hid_t group_id = H5Gopen( getLocId(), name );
// If the opening of the group failed, throw an exception
if( group_id <= 0 )
{
throwException("openGroup", "H5Gopen failed");
}
// No failure, create and return the Group object
Group group( group_id );
return( group );
}
// Creates a new dataset at this location.
DataSet CommonFG::createDataSet( const string& name, const DataType& data_type, const DataSpace& data_space, const DSetCreatPropList& create_plist ) const
{
return( createDataSet( name.c_str(), data_type, data_space, create_plist ));
}
DataSet CommonFG::createDataSet( const char* name, const DataType& data_type, const DataSpace& data_space, const DSetCreatPropList& create_plist ) const
{
// Obtain identifiers for C API
hid_t type_id = data_type.getId();
hid_t space_id = data_space.getId();
hid_t create_plist_id = create_plist.getId();
// Call C routine H5Dcreate to create the named dataset
hid_t dataset_id = H5Dcreate( getLocId(), name, type_id, space_id, create_plist_id );
// If the creation of the dataset failed, throw an exception
if( dataset_id <= 0 )
{
throwException("createDataSet", "H5Dcreate failed");
}
// No failure, create and return the DataSet object
DataSet dataset( dataset_id );
return( dataset );
}
// Opens an existing dataset at this location.
DataSet CommonFG::openDataSet( const string& name ) const
{
return( openDataSet( name.c_str() ));
}
DataSet CommonFG::openDataSet( const char* name ) const
{
// Call C function H5Dopen to open the specified dataset, giving
// the location id and the dataset's name
hid_t dataset_id = H5Dopen( getLocId(), name );
// If the dataset's opening failed, throw an exception
if( dataset_id <= 0 )
{
throwException("openDataSet", "H5Dopen failed");
}
// No failure, create and return the DataSet object
DataSet dataset( dataset_id );
return( dataset );
}
// Creates a link of the specified type from new_name to current_name;
// both names are interpreted relative to the specified location id
void CommonFG::link( H5G_link_t link_type, const string& curr_name, const string& new_name ) const
{
link( link_type, curr_name.c_str(), new_name.c_str() );
}
void CommonFG::link( H5G_link_t link_type, const char* curr_name, const char* new_name ) const
{
herr_t ret_value = H5Glink( getLocId(), link_type, curr_name, new_name );
if( ret_value < 0 )
{
throwException("link", "H5Glink failed");
}
}
// Removes the specified name at this location.
void CommonFG::unlink( const string& name ) const
{
unlink( name.c_str() );
}
void CommonFG::unlink( const char* name ) const
{
herr_t ret_value = H5Gunlink( getLocId(), name );
if( ret_value < 0 )
{
throwException("unlink", "H5Gunlink failed");
}
}
// Renames an object at this location.
void CommonFG::move( const string& src, const string& dst ) const
{
move( src.c_str(), dst.c_str() );
}
void CommonFG::move( const char* src, const char* dst ) const
{
herr_t ret_value = H5Gmove( getLocId(), src, dst );
if( ret_value < 0 )
{
throwException("move", "H5Gmove failed");
}
}
// Returns information about an object
void CommonFG::getObjinfo( const string& name, hbool_t follow_link, H5G_stat_t& statbuf ) const
{
getObjinfo( name.c_str(), follow_link, statbuf );
}
void CommonFG::getObjinfo( const char* name, hbool_t follow_link, H5G_stat_t& statbuf ) const
{
herr_t ret_value = H5Gget_objinfo( getLocId(), name, follow_link, &statbuf );
if( ret_value < 0 )
{
throwException("getObjinfo", "H5Gget_objinfo failed");
}
}
// Returns the name of the object that the symbolic link points to.
string CommonFG::getLinkval( const string& name, size_t size ) const
{
return( getLinkval( name.c_str(), size ));
}
string CommonFG::getLinkval( const char* name, size_t size ) const
{
char* value_C = new char[size+1]; // temporary C-string for C API
herr_t ret_value = H5Gget_linkval( getLocId(), name, size, value_C );
if( ret_value < 0 )
{
throwException("getLinkval", "H5Gget_linkval failed");
}
string value = string( value_C );
delete value_C;
return( value );
}
// Sets the comment for an object specified by its name
void CommonFG::setComment( const string& name, const string& comment ) const
{
setComment( name.c_str(), comment.c_str() );
}
void CommonFG::setComment( const char* name, const char* comment ) const
{
herr_t ret_value = H5Gset_comment( getLocId(), name, comment );
if( ret_value < 0 )
{
throwException("setComment", "H5Gset_comment failed");
}
}
// Retrieves comment for specified object
string CommonFG::getComment( const string& name, size_t bufsize ) const
{
return( getComment( name.c_str(), bufsize ));
}
string CommonFG::getComment( const char* name, size_t bufsize ) const
{
// temporary C-string for the object's comment
char* comment_C = new char[bufsize+1];
herr_t ret_value = H5Gget_comment( getLocId(), name, bufsize, comment_C );
// if H5Gget_comment returns SUCCEED, return the string comment
if( ret_value < 0 )
{
throwException("getComment", "H5Gget_comment failed");
}
string comment = string( comment_C );
delete comment_C;
return( comment );
}
// Mounts the file 'child' onto this group
void CommonFG::mount( const string& name, H5File& child, PropList& plist ) const
{
mount( name.c_str(), child, plist );
}
void CommonFG::mount( const char* name, H5File& child, PropList& plist ) const
{
// Obtain identifiers for C API
hid_t plist_id = plist.getId();
hid_t child_id = child.getId();
// Call C routine H5Fmount to do the mouting
herr_t ret_value = H5Fmount( getLocId(), name, child_id, plist_id );
// Raise exception if H5Fmount returns negative value
if( ret_value < 0 )
{
throwException("mount", "H5Fmount failed");
}
}
// Unmounts the file named 'name' from this parent group
void CommonFG::unmount( const string& name ) const
{
unmount( name.c_str() );
}
void CommonFG::unmount( const char* name ) const
{
// Call C routine H5Fmount to do the mouting
herr_t ret_value = H5Funmount( getLocId(), name );
// Raise exception if H5Funmount returns negative value
if( ret_value < 0 )
{
throwException("unmount", "H5Funmount failed");
}
}
// This private member function calls the C API H5Topen to open the
// named datatype and returns the datatype's identifier. The function
// is used by the functions openXxxType's below for opening the sub-types
hid_t CommonFG::p_openDataType( const char* name ) const
{
// Call C function H5Topen to open the named datatype in this group,
// giving either the file or group id
hid_t datatype_id = H5Topen( getLocId(), name );
// If the datatype's opening failed, throw an exception
if( datatype_id <= 0 )
{
throwException("openDataType", "H5Topen failed");
}
// No failure, return the datatype id
return( datatype_id );
}
//
// The following member functions use the private function
// p_openDataType to open a named datatype in this location
//
// Opens the named generic datatype in this group.
DataType CommonFG::openDataType( const string& name ) const
{
return( openDataType( name.c_str()) );
}
DataType CommonFG::openDataType( const char* name ) const
{
DataType data_type( p_openDataType( name ));
return( data_type );
}
// Opens the named enumeration datatype in this group.
EnumType CommonFG::openEnumType( const string& name ) const
{
return( openEnumType( name.c_str()) );
}
EnumType CommonFG::openEnumType( const char* name ) const
{
EnumType enum_type( p_openDataType( name ));
return( enum_type );
}
// Opens the named compound datatype in this group.
CompType CommonFG::openCompType( const string& name ) const
{
return( openCompType( name.c_str()) );
}
CompType CommonFG::openCompType( const char* name ) const
{
CompType comp_type( p_openDataType( name ));
return( comp_type );
}
// Opens the named integer datatype in this group.
IntType CommonFG::openIntType( const string& name ) const
{
return( openIntType( name.c_str()) );
}
IntType CommonFG::openIntType( const char* name ) const
{
IntType int_type( p_openDataType( name ));
return( int_type );
}
// Opens the named floating-point datatype in this group.
FloatType CommonFG::openFloatType( const string& name ) const
{
return( openFloatType( name.c_str()) );
}
FloatType CommonFG::openFloatType( const char* name ) const
{
FloatType float_type( p_openDataType( name ));
return( float_type );
}
// Opens the named string datatype of this group
StrType CommonFG::openStrType( const string& name ) const
{
return( openStrType( name.c_str()) );
}
StrType CommonFG::openStrType( const char* name ) const
{
StrType str_type( p_openDataType( name ));
return( str_type );
}
// Iterates a user's function over the entries of a group.
int CommonFG::iterateElems( const string& name, int *idx, H5G_iterate_t op , void* op_data )
{
return( iterateElems( name.c_str(), idx, op, op_data ));
}
int CommonFG::iterateElems( const char* name, int *idx, H5G_iterate_t op , void* op_data )
{
int ret_value = H5Giterate( getLocId(), name, idx, op, op_data );
if( ret_value < 0 )
{
throwException("iterateElems", "H5Giterate failed");
}
return( ret_value );
}
CommonFG::CommonFG()
{ // do nothing
}
CommonFG::~CommonFG()
{ // do nothing
}
#ifndef H5_NO_NAMESPACE
}
#endif
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