1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#ifdef OLD_HEADER_FILENAME
#include <iostream.h>
#else
#include <iostream>
#endif
#include <string>
#include "H5Include.h"
#include "H5Exception.h"
#include "H5Library.h"
#include "H5IdComponent.h"
#include "H5DataSpace.h"
#include "H5private.h" // for HDmemset
#ifndef H5_NO_NAMESPACE
namespace H5 {
#endif
//--------------------------------------------------------------------------
// Function: IdComponent overloaded constructor
///\brief Creates an IdComponent object using the id of an existing object.
///\param h5_id - IN: Id of an existing object
///\exception H5::DataTypeIException
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
IdComponent::IdComponent(const hid_t h5_id) {}
//--------------------------------------------------------------------------
// Function: IdComponent copy constructor
///\brief Copy constructor: makes a copy of the original IdComponent object.
///\param original - IN: IdComponent instance to copy
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
IdComponent::IdComponent( const IdComponent& original ) {}
//--------------------------------------------------------------------------
// Function: IdComponent::incRefCount
///\brief Increment reference counter for a given id.
// Programmer Binh-Minh Ribler - May 2005
//--------------------------------------------------------------------------
void IdComponent::incRefCount(const hid_t obj_id) const
{
if (p_valid_id(obj_id))
if (H5Iinc_ref(obj_id) < 0)
throw IdComponentException(inMemFunc("incRefCount"), "incrementing object ref count failed");
}
//--------------------------------------------------------------------------
// Function: IdComponent::incRefCount
///\brief Increment reference counter for the id of this object.
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
void IdComponent::incRefCount() const
{
incRefCount(getId());
}
//--------------------------------------------------------------------------
// Function: IdComponent::decRefCount
///\brief Decrement reference counter for a given id.
// Programmer Binh-Minh Ribler - May 2005
// Modification:
// Added the check for ref counter to give a little more info
// on why H5Idec_ref fails in some cases - BMR 5/19/2005
//--------------------------------------------------------------------------
void IdComponent::decRefCount(const hid_t obj_id) const
{
if (p_valid_id(obj_id))
if (H5Idec_ref(obj_id) < 0)
if (H5Iget_ref(obj_id) <= 0)
throw IdComponentException(inMemFunc("decRefCount"),
"object ref count is 0 or negative");
else
throw IdComponentException(inMemFunc("decRefCount"),
"decrementing object ref count failed");
}
//--------------------------------------------------------------------------
// Function: IdComponent::decRefCount
///\brief Decrement reference counter for the id of this object.
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
void IdComponent::decRefCount() const
{
decRefCount(getId());
}
//--------------------------------------------------------------------------
// Function: IdComponent::getCounter
///\brief Returns the reference counter for a given id.
///\return Reference count
// Programmer Binh-Minh Ribler - May 2005
//--------------------------------------------------------------------------
int IdComponent::getCounter(const hid_t obj_id) const
{
int counter = 0;
if (p_valid_id(obj_id))
{
counter = H5Iget_ref(obj_id);
if (counter < 0)
throw IdComponentException(inMemFunc("incRefCount"), "getting object ref count failed - negative");
}
return (counter);
}
//--------------------------------------------------------------------------
// Function: IdComponent::getCounter
///\brief Returns the reference counter for the id of this object.
///\return Reference count
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
int IdComponent::getCounter() const
{
return (getCounter(getId()));
}
//--------------------------------------------------------------------------
// Function: getHDFObjType (static)
///\brief Given an id, returns the type of the object.
///\return a valid HDF object type, which may be one of the following:
/// \li \c H5I_FILE
/// \li \c H5I_GROUP
/// \li \c H5I_DATATYPE
/// \li \c H5I_DATASPACE
/// \li \c H5I_DATASET
/// \li \c H5I_ATTR
/// \li or \c H5I_BADID, if no valid type can be determined or the
/// input object id is invalid.
// Programmer Binh-Minh Ribler - Jul, 2005
//--------------------------------------------------------------------------
H5I_type_t IdComponent::getHDFObjType(const hid_t obj_id)
{
if (obj_id == 0)
return H5I_BADID; // invalid
H5I_type_t id_type = H5Iget_type(obj_id);
if (id_type <= H5I_BADID || id_type >= H5I_NTYPES)
return H5I_BADID; // invalid
else
return id_type; // valid type
}
//--------------------------------------------------------------------------
// Function: getHDFObjType
///\brief Returns the type of the object. It is an overloaded function
/// of the above function.
///\return a valid HDF object type, which may be one of the following:
/// \li \c H5I_FILE
/// \li \c H5I_GROUP
/// \li \c H5I_DATATYPE
/// \li \c H5I_DATASPACE
/// \li \c H5I_DATASET
/// \li \c H5I_ATTR
/// \li or \c H5I_BADID, if no valid type can be determined or the
/// input object id is invalid.
// Programmer Binh-Minh Ribler - Mar, 2014
//--------------------------------------------------------------------------
H5I_type_t IdComponent::getHDFObjType() const
{
return(getHDFObjType(getId()));
}
//--------------------------------------------------------------------------
// Function: IdComponent::operator=
///\brief Assignment operator.
///\param rhs - IN: Reference to the existing object
///\return Reference to IdComponent instance
///\exception H5::IdComponentException when attempt to close the HDF5
/// object fails
// Description
// First, close the current valid id of this object. Then
// copy the id from rhs to this object, and increment the
// reference counter of the id to indicate that another object
// is referencing that id.
// Modification
// 2010/5/9 - BMR
// Removed close() and incRefCount() because setId/p_setId takes
// care of close() and setId takes care incRefCount().
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
IdComponent& IdComponent::operator=( const IdComponent& rhs )
{
if (this != &rhs)
{
// handling references to this id
try {
setId(rhs.getId());
// Note: a = b, so there are two objects with the same hdf5 id
// that's why incRefCount is needed, and it is called by setId
}
catch (Exception close_error) {
throw FileIException(inMemFunc("operator="), close_error.getDetailMsg());
}
}
return *this;
}
//--------------------------------------------------------------------------
// Function: IdComponent::setId
///\brief Sets the identifier of this object to a new value.
///
///\exception H5::IdComponentException when the attempt to close the HDF5
/// object fails
// Description:
// p_setId ensures that the current valid id of this object is
// properly closed before resetting the object's id to the new id.
// Programmer Binh-Minh Ribler - 2000
// Modification
// 2008/7/23 - BMR
// Changed all subclasses' setId to p_setId and put back setId
// here. p_setId is used in the library where the id provided
// by a C API passed on to user's application in the form of a
// C++ API object, which will be destroyed properly, and so
// p_setId does not call incRefCount. On the other hand, the
// public version setId is used by other applications, in which
// the id passed to setId already has a reference count, so setId
// must call incRefCount.
//--------------------------------------------------------------------------
void IdComponent::setId(const hid_t new_id)
{
// set to new_id
p_setId(new_id);
// increment the reference counter of the new id
incRefCount();
}
//--------------------------------------------------------------------------
// Function: IdComponent destructor
///\brief Noop destructor.
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
IdComponent::~IdComponent() {}
//
// Implementation of protected functions for HDF5 Reference Interface
// and miscelaneous helpers.
//
#ifndef DOXYGEN_SHOULD_SKIP_THIS
//--------------------------------------------------------------------------
// Function: IdComponent::inMemFunc
///\brief Makes and returns string "<class-name>::<func_name>"
///\param func_name - Name of the function where failure occurs
// Description
/// Concatenates the class name of this object with the
/// passed-in function name to create a string that indicates
/// where the failure occurs. The class-name is provided by
/// fromClass(). This string will be used by a base class when
/// an exception is thrown.
// Programmer Binh-Minh Ribler - Aug 6, 2005
//--------------------------------------------------------------------------
H5std_string IdComponent::inMemFunc(const char* func_name) const
{
#ifdef H5_VMS
H5std_string full_name = fromClass();
full_name.append("::");
full_name.append(func_name);
#else
H5std_string full_name = func_name;
full_name.insert(0, "::");
full_name.insert(0, fromClass());
#endif /*H5_VMS*/
return (full_name);
}
//--------------------------------------------------------------------------
// Function: IdComponent default constructor - private
///\brief Default constructor.
// Programmer Binh-Minh Ribler - 2000
//--------------------------------------------------------------------------
IdComponent::IdComponent() {}
//--------------------------------------------------------------------------
// Function: IdComponent::p_get_file_name (protected)
// Purpose: Gets the name of the file, in which this object belongs.
// Exception: H5::IdComponentException
// Description:
// This function is protected so that the user applications can
// only have access to its code via allowable classes, namely,
// Attribute and H5Location subclasses.
// Programmer Binh-Minh Ribler - Jul, 2004
//--------------------------------------------------------------------------
H5std_string IdComponent::p_get_file_name() const
{
hid_t temp_id = getId();
// Preliminary call to H5Fget_name to get the length of the file name
ssize_t name_size = H5Fget_name(temp_id, NULL, 0);
// If H5Aget_name returns a negative value, raise an exception,
if( name_size < 0 )
{
throw IdComponentException("", "H5Fget_name failed");
}
// Call H5Fget_name again to get the actual file name
char* name_C = new char[name_size+1]; // temporary C-string for C API
HDmemset(name_C, 0, name_size+1); // clear buffer
name_size = H5Fget_name(temp_id, name_C, name_size+1);
// Check for failure again
if( name_size < 0 )
{
throw IdComponentException("", "H5Fget_name failed");
}
// Convert the C file name and return
H5std_string file_name(name_C);
delete []name_C;
return(file_name);
}
//
// Local functions used in this class
//
//--------------------------------------------------------------------------
// Function: p_valid_id
// Purpose: Verifies that the given id is a valid id so it can be passed
// into an H5I C function.
// Return true if id is valid, false, otherwise
// Programmer Binh-Minh Ribler - May, 2005
//--------------------------------------------------------------------------
bool IdComponent::p_valid_id(const hid_t obj_id)
{
if (obj_id == 0)
return false;
H5I_type_t id_type = H5Iget_type(obj_id);
if (id_type <= H5I_BADID || id_type >= H5I_NTYPES)
return false;
else
return true;
}
// Notes about IdComponent::id
// May 2008 - BMR
// Class hierarchy is revised to address bugzilla 1068...
// ...member IdComponent::id is moved into subclasses, and
// IdComponent::getId now becomes pure virtual function.
// (reasons: 1. encountered problems when adding H5Location;
// 2. Scott Meyers, item 33)
#endif // DOXYGEN_SHOULD_SKIP_THIS
#ifndef H5_NO_NAMESPACE
}
#endif
|