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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*****************************************************************************
FILE
tvlstr.cpp - HDF5 C++ testing the Variable-Length String functionality
EXTERNAL ROUTINES/VARIABLES:
***************************************************************************/
#ifdef OLD_HEADER_FILENAME
#include <iostream.h>
#else
#include <iostream>
#endif
using std::cerr;
using std::endl;
#include <string>
#include "H5Cpp.h" // C++ API header file
using namespace H5;
#include "h5test.h"
#include "h5cpputil.h" // C++ utilility header file
// Data file used in most test functions
const H5std_string FILENAME("tvlstr.h5");
// 1-D dataset with fixed dimensions
const int SPACE1_RANK = 1;
const hsize_t SPACE1_DIM1 = 4;
/****************************************************************
**
** test_vlstr_alloc_custom(): Test VL datatype custom memory
** allocation routines. This routine just uses malloc to
** allocate the memory and increments the amount of memory
** allocated. It is passed into setVlenMemManager.
**
** Note: exact copy from the C version.
** (Not used now)
****************************************************************/
#if 0 // not used now
static void *test_vlstr_alloc_custom(size_t size, void *info)
{
void *ret_value=NULL; // Pointer to return
size_t *mem_used=(size_t *)info; // Get the pointer to the memory used
size_t extra; // Extra space needed
/*
* This weird contortion is required on the DEC Alpha to keep the
* alignment correct - QAK
*/
extra=MAX(sizeof(void *),sizeof(size_t));
if((ret_value=HDmalloc(extra+size))!=NULL) {
*(size_t *)ret_value=size;
*mem_used+=size;
} // end if
ret_value = ((unsigned char *)ret_value) + extra;
return(ret_value);
}
#endif
/****************************************************************
**
** test_vlstr_free_custom(): Test VL datatype custom memory
** allocation routines. This routine just uses free to
** release the memory and decrements the amount of memory
** allocated. It is passed into setVlenMemManager.
**
** Note: exact copy from the C version.
** (Not used now)
****************************************************************/
#if 0 // not used now
static void test_vlstr_free_custom(void *_mem, void *info)
{
unsigned char *mem;
size_t *mem_used=(size_t *)info; // Get the pointer to the memory used
size_t extra; // Extra space needed
/*
* This weird contortion is required on the DEC Alpha to keep the
* alignment correct - QAK
*/
extra=MAX(sizeof(void *),sizeof(size_t));
if(_mem!=NULL) {
mem=((unsigned char *)_mem)-extra;
*mem_used-=*(size_t *)mem;
HDfree(mem);
} // end if
}
#endif
/*-------------------------------------------------------------------------
* Function: test_vlstring_dataset
*
* Purpose: Test writing/reading VL strings on datasets.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
// String for testing datasets
// static char stastring_ds_write[1]={'A'};
// Info for a string dataset
const H5std_string DSET1_NAME("String_ds");
const H5std_string DSET1_DATA("String Dataset");
static void
test_vlstring_dataset()
{
char *dynstring_ds_write = NULL;
char *string_ds_check = NULL;
// Output message about test being performed
SUBTEST("VL String on Datasets");
try {
// Open the file
H5File file1(FILENAME, H5F_ACC_TRUNC);
// Create a datatype to refer to.
StrType vlst(0, H5T_VARIABLE);
// Open the root group.
Group root = file1.openGroup("/");
// Create dataspace for the dataset.
DataSpace ds_space(H5S_SCALAR);
// Create an dataset in the root group.
DataSet dset1 = root.createDataSet(DSET1_NAME, vlst, ds_space);
// Write data to the dataset.
dset1.write(DSET1_DATA, vlst);
// Read and verify the dataset string as a string of chars.
dset1.read(&string_ds_check, vlst);
if (HDstrcmp(string_ds_check, DSET1_DATA.c_str()) != 0)
TestErrPrintf("Line %d: Attribute data different: DSET1_DATA=%s,string_ds_check=%s\n", __LINE__,
DSET1_DATA.c_str(), string_ds_check);
HDfree(string_ds_check); // note: no need for std::string test
string_ds_check = NULL;
// Read and verify the dataset string as an std::string.
H5std_string read_str;
dset1.read(read_str, vlst);
if (read_str != DSET1_DATA)
TestErrPrintf("Line %d: Attribute data different: DSET1_DATA=%s,read_str=%s\n", __LINE__,
DSET1_DATA.c_str(), read_str.c_str());
// Close the dataset.
dset1.close();
// Test scalar type dataset with 1 value.
dset1 = root.createDataSet("test_scalar_small", vlst, ds_space);
dynstring_ds_write = (char *)HDcalloc(2, sizeof(char));
HDmemset(dynstring_ds_write, 'A', 1);
// Write data to the dataset, then read it back.
dset1.write(&dynstring_ds_write, vlst);
dset1.read(&string_ds_check, vlst);
// Verify data read.
if (HDstrcmp(string_ds_check, dynstring_ds_write) != 0)
TestErrPrintf("VL string datasets don't match!, dynstring_ds_write=%s, string_ds_check=%s\n",
dynstring_ds_write, string_ds_check);
HDfree(string_ds_check);
string_ds_check = NULL;
dset1.close();
// Open dataset DSET1_NAME again.
dset1 = root.openDataSet(DSET1_NAME);
// Close dataset and file
dset1.close();
file1.close();
PASSED();
} // end try block
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vlstring_dataset()", __LINE__, __FILE__, E.getCDetailMsg());
}
if (dynstring_ds_write)
HDfree(dynstring_ds_write);
if (string_ds_check)
HDfree(string_ds_check);
} // test_vlstring_dataset()
/*-------------------------------------------------------------------------
* Function: test_vlstring_array_dataset
*
* Purpose: Test writing/reading VL string array to/from datasets.
*
* Return: None
*
* Programmer: Binh-Minh Ribler
* July, 2009
*
*-------------------------------------------------------------------------
*/
const H5std_string DSSTRARR_NAME("StringArray_dset");
static void
test_vlstring_array_dataset()
{
const char *string_ds_array[SPACE1_DIM1] = {"Line 1", "Line 2", "Line 3",
"Line 4"}; // Information to write
// Output message about test being performed
SUBTEST("VL String Array on Datasets");
H5File *file1 = NULL;
try {
// Create file.
file1 = new H5File(FILENAME, H5F_ACC_RDWR);
// Create dataspace for datasets.
hsize_t dims1[] = {SPACE1_DIM1};
DataSpace ds_space(SPACE1_RANK, dims1);
// Create a datatype to refer to.
StrType vlst(0, H5T_VARIABLE);
// Create and write a dataset.
DataSet dataset(file1->createDataSet(DSSTRARR_NAME, vlst, ds_space));
dataset.write(string_ds_array, vlst);
// Read and verify the dataset using strings of chars as buffer.
// Note: reading by array of H5std_string doesn't work yet.
char *string_ds_check[SPACE1_DIM1];
dataset.read(string_ds_check, vlst);
hsize_t ii;
for (ii = 0; ii < SPACE1_DIM1; ii++) {
if (HDstrcmp(string_ds_check[ii], string_ds_array[ii]) != 0)
TestErrPrintf("Line %d: Dataset data different: written=%s,read=%s\n", __LINE__,
string_ds_array[ii], string_ds_check[ii]);
HDfree(string_ds_check[ii]);
}
// Close objects that are no longer needed.
dataset.close();
ds_space.close();
//
// Test with scalar data space.
//
// Create H5S_SCALAR data space.
DataSpace scalar_space;
// Create and write another dataset.
DataSet dataset2(file1->createDataSet("Dataset2", vlst, scalar_space));
char * wdata2 = (char *)HDcalloc(65534, sizeof(char));
HDmemset(wdata2, 'A', 65533);
dataset2.write(&wdata2, vlst);
char *rdata2;
dataset2.read(&rdata2, vlst);
if (HDstrcmp(wdata2, rdata2) != 0)
TestErrPrintf("Line %d: Dataset data different: written=%s,read=%s\n", __LINE__, wdata2, rdata2);
// Release resources from second dataset operation.
scalar_space.close();
dataset2.close();
HDfree(wdata2);
HDfree(rdata2);
// Close objects and file.
dataset2.close();
vlst.close();
file1->close();
PASSED();
} // end try
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vlstring_array_dataset()", __LINE__, __FILE__, E.getCDetailMsg());
}
if (file1)
delete file1;
} // end test_vlstring_array_dataset()
/*-------------------------------------------------------------------------
* Function: test_vlstrings_special
*
* Purpose: Test VL string code for special string cases, nil and
* zero-sized.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
static void
test_vlstrings_special()
{
const char *wdata[SPACE1_DIM1] = {"one", "two", "", "four"};
const char *wdata2[SPACE1_DIM1] = {NULL, NULL, NULL, NULL};
char * rdata[SPACE1_DIM1]; // Information read in
// Output message about test being performed.
SUBTEST("Special VL Strings");
try {
// Create file.
H5File file1(FILENAME, H5F_ACC_TRUNC);
// Create dataspace for datasets.
hsize_t dims1[] = {SPACE1_DIM1};
DataSpace sid1(SPACE1_RANK, dims1);
// Create a datatype to refer to.
StrType vlst(0, H5T_VARIABLE);
// Create a dataset.
DataSet dataset(file1.createDataSet("Dataset3", vlst, sid1));
// Read from the dataset before writing data.
dataset.read(rdata, vlst);
// Check data read in.
hsize_t ii; // counting variable
for (ii = 0; ii < SPACE1_DIM1; ii++)
if (rdata[ii] != NULL)
TestErrPrintf("VL doesn't match!, rdata[%d]=%p\n", (int)ii, rdata[ii]);
// Write dataset to disk, then read it back.
dataset.write(wdata, vlst);
dataset.read(rdata, vlst);
// Compare data read in.
for (ii = 0; ii < SPACE1_DIM1; ii++) {
size_t wlen = HDstrlen(wdata[ii]);
size_t rlen = HDstrlen(rdata[ii]);
if (wlen != rlen) {
TestErrPrintf("VL data lengths don't match!, strlen(wdata[%d])=%u, strlen(rdata[%d])=%u\n",
(int)ii, (unsigned)wlen, (int)ii, (unsigned)rlen);
continue;
} // end if
if (HDstrcmp(wdata[ii], rdata[ii]) != 0) {
TestErrPrintf("VL data values don't match!, wdata[%d]=%s, rdata[%d]=%s\n", (int)ii, wdata[ii],
(int)ii, rdata[ii]);
continue;
} // end if
} // end for
// Reclaim the read VL data.
DataSet::vlenReclaim((void *)rdata, vlst, sid1);
// Close Dataset.
dataset.close();
/*
* Create another dataset to test nil strings.
*/
// Create the property list and set the fill value for the second
// dataset.
DSetCreatPropList dcpl;
char * fill = NULL; // Fill value
dcpl.setFillValue(vlst, &fill);
dataset = file1.createDataSet("Dataset4", vlst, sid1, dcpl);
// Close dataset creation property list.
dcpl.close();
// Read from dataset before writing data.
dataset.read(rdata, vlst);
// Check data read in.
for (ii = 0; ii < SPACE1_DIM1; ii++)
if (rdata[ii] != NULL)
TestErrPrintf("VL doesn't match!, rdata[%d]=%p\n", (int)ii, rdata[ii]);
// Try to write nil strings to disk.
dataset.write(wdata2, vlst);
// Read nil strings back from disk.
dataset.read(rdata, vlst);
// Check data read in.
for (ii = 0; ii < SPACE1_DIM1; ii++)
if (rdata[ii] != NULL)
TestErrPrintf("VL doesn't match!, rdata[%d]=%p\n", (int)ii, rdata[ii]);
// Close objects and file.
dataset.close();
vlst.close();
sid1.close();
file1.close();
PASSED();
} // end try
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vlstrings_special()", __LINE__, __FILE__, E.getCDetailMsg());
}
} // test_vlstrings_special
/*-------------------------------------------------------------------------
* Function: test_vlstring_type
*
* Purpose: Test if VL string is treated as string.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
const H5std_string VLSTR_TYPE("vl_string_type");
static void
test_vlstring_type()
{
// Output message about test being performed.
SUBTEST("VL String Type");
H5File *file1 = NULL;
try {
// Open file.
file1 = new H5File(FILENAME, H5F_ACC_RDWR);
// Create a datatype to refer to.
StrType vlst(PredType::C_S1);
// Change padding and verify it.
vlst.setStrpad(H5T_STR_NULLPAD);
H5T_str_t pad = vlst.getStrpad();
verify_val(pad, H5T_STR_NULLPAD, "StrType::getStrpad", __LINE__, __FILE__);
// Convert to variable-length string.
vlst.setSize(H5T_VARIABLE);
// Check if datatype is VL string.
H5T_class_t type_class = vlst.getClass();
verify_val(type_class, H5T_STRING, "DataType::getClass", __LINE__, __FILE__);
bool is_variable_str = vlst.isVariableStr();
verify_val(is_variable_str, true, "DataType::isVariableStr", __LINE__, __FILE__);
// Check default character set and padding.
H5T_cset_t cset = vlst.getCset();
verify_val(cset, H5T_CSET_ASCII, "StrType::getCset", __LINE__, __FILE__);
pad = vlst.getStrpad();
verify_val(pad, H5T_STR_NULLPAD, "StrType::getStrpad", __LINE__, __FILE__);
// Commit variable-length string datatype to storage.
vlst.commit(*file1, VLSTR_TYPE);
// Close datatype.
vlst.close();
// Try opening datatype again.
vlst = file1->openStrType(VLSTR_TYPE); // deprecated
// Close again and reopen with constructor.
vlst.close();
StrType vlst1(*file1, VLSTR_TYPE);
// Close datatype and file.
vlst1.close();
file1->close();
delete file1;
// Open file.
file1 = new H5File(FILENAME, H5F_ACC_RDWR);
{ // deprecated
// Open the variable-length string datatype just created.
vlst = file1->openStrType(VLSTR_TYPE);
// Verify character set and padding.
cset = vlst.getCset();
verify_val(cset, H5T_CSET_ASCII, "StrType::getCset", __LINE__, __FILE__);
pad = vlst.getStrpad();
verify_val(pad, H5T_STR_NULLPAD, "StrType::getStrpad", __LINE__, __FILE__);
// Close type to test new function.
vlst.close();
} // deprecated
// Open the variable-length string datatype just created.
StrType vlst2(*file1, VLSTR_TYPE);
// Verify character set and padding.
cset = vlst2.getCset();
verify_val(cset, H5T_CSET_ASCII, "StrType::getCset", __LINE__, __FILE__);
pad = vlst2.getStrpad();
verify_val(pad, H5T_STR_NULLPAD, "StrType::getStrpad", __LINE__, __FILE__);
// Close datatype and file.
vlst2.close();
file1->close();
PASSED();
} // end try block
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vlstring_type()", __LINE__, __FILE__, E.getCDetailMsg());
}
if (file1)
delete file1;
} // end test_vlstring_type()
/*-------------------------------------------------------------------------
* Function: test_compact_vlstring
*
* Purpose: Test storing VL strings in compact datasets.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
static void
test_compact_vlstring()
{
// Output message about test being performed
SUBTEST("VL Strings on Compact Dataset");
try {
// Create file
H5File file1(FILENAME, H5F_ACC_TRUNC);
// Create dataspace for datasets
hsize_t dims1[] = {SPACE1_DIM1};
DataSpace sid1(SPACE1_RANK, dims1);
// Create a datatype to refer to
StrType vlst(0, H5T_VARIABLE);
// Create dataset create property list and set layout
DSetCreatPropList plist;
plist.setLayout(H5D_COMPACT);
// Create a dataset
DataSet dataset(file1.createDataSet("Dataset5", vlst, sid1, plist));
// Write dataset to disk
const char *wdata[SPACE1_DIM1] = {"one", "two", "three", "four"};
dataset.write(wdata, vlst);
// Read dataset from disk
char *rdata[SPACE1_DIM1]; // Information read in
dataset.read(rdata, vlst);
// Compare data read in
hsize_t i;
for (i = 0; i < SPACE1_DIM1; i++) {
if (HDstrlen(wdata[i]) != strlen(rdata[i])) {
TestErrPrintf("VL data length don't match!, strlen(wdata[%d])=%d, strlen(rdata[%d])=%d\n",
(int)i, (int)strlen(wdata[i]), (int)i, (int)strlen(rdata[i]));
continue;
} // end if
if (HDstrcmp(wdata[i], rdata[i]) != 0) {
TestErrPrintf("VL data values don't match!, wdata[%d]=%s, rdata[%d]=%s\n", (int)i, wdata[i],
(int)i, rdata[i]);
continue;
} // end if
} // end for
// Reclaim the read VL data
DataSet::vlenReclaim((void *)rdata, vlst, sid1);
// Close objects and file
dataset.close();
vlst.close();
sid1.close();
plist.close();
file1.close();
PASSED();
} // end try
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_compact_vlstrings()", __LINE__, __FILE__, E.getCDetailMsg());
}
} // test_compact_vlstrings
/*-------------------------------------------------------------------------
* Function: test_vlstring_attribute
*
* Purpose: Test writing/reading VL strings on attributes.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
// String for writing to attribute
static char *string_att_write = NULL;
// Info for a string attribute
const H5std_string ATTRSTR_NAME("String_attr");
const H5std_string ATTRSTR_DATA("String Attribute");
static void
test_vlstring_attribute()
{
// Output message about test being performed
SUBTEST("VL String on Attributes");
try {
// Open the file
H5File file1(FILENAME, H5F_ACC_RDWR);
// Create a datatype to refer to.
StrType vlst(0, H5T_VARIABLE);
// Open the root group.
Group root = file1.openGroup("/");
// Create dataspace for the attribute.
DataSpace att_space(H5S_SCALAR);
// Create an attribute for the root group.
Attribute gr_attr = root.createAttribute(ATTRSTR_NAME, vlst, att_space);
// Write data to the attribute.
gr_attr.write(vlst, ATTRSTR_DATA);
// Read and verify the attribute string as a string of chars.
char *string_att_check;
gr_attr.read(vlst, &string_att_check);
if (HDstrcmp(string_att_check, ATTRSTR_DATA.c_str()) != 0)
TestErrPrintf("Line %d: Attribute data different: ATTRSTR_DATA=%s,string_att_check=%s\n",
__LINE__, ATTRSTR_DATA.c_str(), string_att_check);
HDfree(string_att_check); // note: no need for std::string test
// Read and verify the attribute string as an std::string.
H5std_string read_str;
gr_attr.read(vlst, read_str);
if (read_str != ATTRSTR_DATA)
TestErrPrintf("Line %d: Attribute data different: ATTRSTR_DATA=%s,read_str=%s\n", __LINE__,
ATTRSTR_DATA.c_str(), read_str.c_str());
// Close group's attribute.
gr_attr.close();
// Test creating a "large" sized string attribute
gr_attr = root.createAttribute("test_scalar_large", vlst, att_space);
string_att_write = (char *)HDcalloc(8192, sizeof(char));
HDmemset(string_att_write, 'A', 8191);
// Write data to the attribute, then read it back.
gr_attr.write(vlst, &string_att_write);
gr_attr.read(vlst, &string_att_check);
// Verify data read.
if (HDstrcmp(string_att_check, string_att_write) != 0)
TestErrPrintf("VL string attributes don't match!, string_att_write=%s, string_att_check=%s\n",
string_att_write, string_att_check);
// Release resources.
HDfree(string_att_check);
HDfree(string_att_write);
gr_attr.close();
file1.close();
PASSED();
} // end try block
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vlstring_attribute()", __LINE__, __FILE__, E.getCDetailMsg());
}
} // test_vlstring_attribute()
#if 0
/*-------------------------------------------------------------------------
* Function: test_read_vl_string_attribute
*
* Purpose: Test reading VL strings from attributes.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
static void test_read_vl_string_attribute()
{
// Output message about test being performed
SUBTEST("reading VL String as attributes");
try {
// Open file
H5File file1(FILENAME, H5F_ACC_RDONLY);
// Create a datatype to refer to.
StrType vlst(0, H5T_VARIABLE);
// Open the root group and its attribute named ATTRSTR_NAME.
Group root = file1.openGroup("/");
Attribute att = root.openAttribute(ATTRSTR_NAME);
// Test reading "normal" sized string attribute
char *string_att_check;
att.read(vlst, &string_att_check);
if(HDstrcmp(string_att_check,ATTRSTR_DATA.c_str())!=0)
TestErrPrintf("VL string attributes don't match!, string_att=%s, string_att_check=%s\n",ATTRSTR_DATA.c_str(),string_att_check);
HDfree(string_att_check);
att.close();
// Test reading "large" sized string attribute
att = root.openAttribute("test_scalar_large");
att.read(vlst, &string_att_check);
if(HDstrcmp(string_att_check,string_att_write)!=0)
TestErrPrintf("VL string attributes don't match!, string_att_write=%s, string_att_check=%s\n",string_att_write,string_att_check);
HDfree(string_att_check);
HDfree(string_att_write); // Free string allocated in test_write_vl_string_attribute
// Close objects and file.
att.close();
vlst.close();
root.close();
file1.close();
PASSED();
} // end try
// Catch all exceptions.
catch (Exception& E)
{
issue_fail_msg("test_read_vl_string_attribute()", __LINE__, __FILE__, E.getCDetailMsg());
}
} // test_read_vl_string_attribute
#endif // 2013: need to verify before adding to test
/*-------------------------------------------------------------------------
* Function: test_vlstring_array_attribute
*
* Purpose: Test writing/reading VL string array to/from attributes.
*
* Return: None
*
* Programmer: Binh-Minh Ribler
* July, 2009
*
*-------------------------------------------------------------------------
*/
const H5std_string ATTRSTRARR_NAME("StringArray_attr");
static void
test_vlstring_array_attribute()
{
const char *string_att_array[SPACE1_DIM1] = {"Line 1", "Line 2", "Line 3",
"Line 4"}; // Information to write
// Output message about test being performed
SUBTEST("VL String Array on Attributes");
try {
// Open the file
H5File file1(FILENAME, H5F_ACC_RDWR);
// Create a datatype to refer to.
StrType vlst(0, H5T_VARIABLE);
// Open the root group.
Group root = file1.openGroup("/");
// Create dataspace for datasets.
hsize_t dims1[] = {SPACE1_DIM1};
DataSpace att_space(SPACE1_RANK, dims1);
// Create an attribute for the root group.
Attribute gr_attr = root.createAttribute(ATTRSTRARR_NAME, vlst, att_space);
// Write data to the attribute.
gr_attr.write(vlst, string_att_array);
// Read and verify the attribute string as a string of chars.
// Note: reading by array of H5std_string doesn't work yet.
char *string_att_check[SPACE1_DIM1];
gr_attr.read(vlst, &string_att_check);
hsize_t ii;
for (ii = 0; ii < SPACE1_DIM1; ii++) {
if (HDstrcmp(string_att_check[ii], string_att_array[ii]) != 0)
TestErrPrintf("Line %d: Attribute data different: written=%s,read=%s\n", __LINE__,
string_att_check[ii], string_att_check[ii]);
HDfree(string_att_check[ii]); // note: no need for std::string test
}
// Close group's attribute.
gr_attr.close();
file1.close();
PASSED();
} // end try block
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vlstring_array_attribute()", __LINE__, __FILE__, E.getCDetailMsg());
}
} // test_vlstring_array_attribute()
/* Helper routine for test_vl_rewrite() */
static void
write_scalar_dset(H5File &file, DataType &type, DataSpace &space, char *name, char *data)
{
DataSet dset;
try {
dset = file.createDataSet(name, type, space);
dset.write(&data, type, space, space);
dset.close();
} // end try
catch (FileIException &ferr) {
throw;
}
catch (DataSetIException &derr) {
throw;
}
}
/* Helper routine for test_vl_rewrite() */
static void
read_scalar_dset(H5File &file, DataType &type, DataSpace &space, char *name, char *data)
{
char * data_read;
DataSet dset;
try {
dset = file.openDataSet(name);
dset.read(&data_read, type, space, space);
dset.close();
if (HDstrcmp(data, data_read))
TestErrPrintf("Expected %s for dataset %s but read %s\n", data, name, data_read);
HDfree(data_read);
} // end try
catch (FileIException &ferr) {
throw;
}
catch (DataSetIException &derr) {
throw;
}
}
/*-------------------------------------------------------------------------
* Function: test_vl_rewrite
*
* Purpose: Test I/O on VL strings when many objects in the file
* have been linked/unlinked.
*
* Return: None
*
* Programmer: Binh-Minh Ribler (use C version)
* January, 2007
*
*-------------------------------------------------------------------------
*/
const H5std_string FILENAME2("tvlstr2.h5");
const int REWRITE_NDATASETS = 32;
static void
test_vl_rewrite()
{
// Output message about test being performed
SUBTEST("I/O on VL strings with link/unlink");
try {
// Create the files.
H5File file1(FILENAME, H5F_ACC_TRUNC);
H5File file2(FILENAME2, H5F_ACC_TRUNC);
// Create the VL string datatype.
StrType type(0, H5T_VARIABLE);
// Create dataspace for the attribute.
DataSpace space(H5S_SCALAR);
// Create in file 1.
int i;
char name[256]; // Buffer for names & data
for (i = 0; i < REWRITE_NDATASETS; i++) {
sprintf(name, "/set_%d", i);
write_scalar_dset(file1, type, space, name, name);
}
// Effectively copy data from file 1 to 2.
for (i = 0; i < REWRITE_NDATASETS; i++) {
sprintf(name, "/set_%d", i);
read_scalar_dset(file1, type, space, name, name);
write_scalar_dset(file2, type, space, name, name);
}
// Read back from file 2.
for (i = 0; i < REWRITE_NDATASETS; i++) {
sprintf(name, "/set_%d", i);
read_scalar_dset(file2, type, space, name, name);
}
// Remove from file 2.
for (i = 0; i < REWRITE_NDATASETS; i++) {
sprintf(name, "/set_%d", i);
file2.unlink(name);
}
// Effectively copy from file 1 to file 2.
for (i = 0; i < REWRITE_NDATASETS; i++) {
sprintf(name, "/set_%d", i);
read_scalar_dset(file1, type, space, name, name);
write_scalar_dset(file2, type, space, name, name);
}
// Close objects and file.
type.close();
space.close();
file1.close();
file2.close();
PASSED();
} // end try
// Catch all exceptions.
catch (Exception &E) {
issue_fail_msg("test_vl_rewrite()", __LINE__, __FILE__, E.getCDetailMsg());
}
} // end test_vl_rewrite()
/*-------------------------------------------------------------------------
* Function: test_vlstrings
*
* Purpose: VL string testing main routine.
*
* Return: None
*
* Programmer: Binh-Minh Ribler
* January, 2007
*
*-------------------------------------------------------------------------
*/
extern "C" void
test_vlstrings()
{
// Output message about test being performed
MESSAGE(5, ("Testing Variable-Length Strings"));
// These tests use the same file
// Test basic VL string datatype
test_vlstring_dataset();
test_vlstrings_special();
test_vlstring_type();
test_compact_vlstring();
// Test using VL strings in attributes
test_vlstring_attribute();
// Test using VL string array in attributes and datasets
test_vlstring_array_attribute();
test_vlstring_array_dataset();
// Test writing VL datasets in files with lots of unlinking
test_vl_rewrite();
} // test_vlstrings()
/*-------------------------------------------------------------------------
* Function: cleanup_vlstrings
*
* Purpose: Cleanup temporary test files
*
* Return: none
*
* Programmer: Quincey Koziol
* September 10, 1999
*
*-------------------------------------------------------------------------
*/
extern "C" void
cleanup_vlstrings()
{
HDremove(FILENAME.c_str());
HDremove(FILENAME2.c_str());
}
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