summaryrefslogtreecommitdiffstats
path: root/develop/_attributes.html
blob: 64d9b251bcef4a2d5ce29885c65155ed485d4268 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta http-equiv="X-UA-Compatible" content="IE=9"/>
<meta name="generator" content="Doxygen 1.9.1"/>
<meta name="viewport" content="width=device-width, initial-scale=1"/>
<title>HDF5: $title</title>
<link href="tabs.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="jquery.js"></script>
<script type="text/javascript" src="dynsections.js"></script>
<link href="navtree.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="resize.js"></script>
<script type="text/javascript" src="navtreedata.js"></script>
<script type="text/javascript" src="navtree.js"></script>
<link href="search/search.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="search/searchdata.js"></script>
<script type="text/javascript" src="search/search.js"></script>
<script type="text/javascript">
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
  $(document).ready(function() { init_search(); });
/* @license-end */
</script>
<link href="doxygen.css" rel="stylesheet" type="text/css" />
<link href="hdf5doxy.css" rel="stylesheet" type="text/css">
<!-- <link href="hdf5doxy.css" rel="stylesheet" type="text/css"/>
 -->
<script type="text/javascript" src="hdf5_navtree_hacks.js"></script>
</head>
<body>
<div style="background:#FFDDDD;font-size:120%;text-align:center;margin:0;padding:5px">Please, help us to better serve our user community by answering the following short survey:  <a href="https://www.hdfgroup.org/website-survey/">https://www.hdfgroup.org/website-survey/</a></div>
<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
<div id="titlearea">
<table cellspacing="0" cellpadding="0">
 <tbody>
 <tr style="height: 56px;">
  <td id="projectlogo"><img alt="Logo" src="HDFG-logo.png"/></td>
  <td id="projectalign" style="padding-left: 0.5em;">
   <div id="projectname"><a href="https://www.hdfgroup.org">HDF5</a>
   &#160;<span id="projectnumber">1.15.0.0fa3029</span>
   </div>
   <div id="projectbrief">API Reference</div>
  </td>
   <td>        <div id="MSearchBox" class="MSearchBoxInactive">
        <span class="left">
          <img id="MSearchSelect" src="search/mag_sel.svg"
               onmouseover="return searchBox.OnSearchSelectShow()"
               onmouseout="return searchBox.OnSearchSelectHide()"
               alt=""/>
          <input type="text" id="MSearchField" value="Search" accesskey="S"
               onfocus="searchBox.OnSearchFieldFocus(true)" 
               onblur="searchBox.OnSearchFieldFocus(false)" 
               onkeyup="searchBox.OnSearchFieldChange(event)"/>
          </span><span class="right">
            <a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.svg" alt=""/></a>
          </span>
        </div>
</td>
 </tr>
 </tbody>
</table>
</div>
<!-- end header part -->
<!-- Generated by Doxygen 1.9.1 -->
<script type="text/javascript">
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
var searchBox = new SearchBox("searchBox", "search",false,'Search','.html');
/* @license-end */
</script>
</div><!-- top -->
<div id="side-nav" class="ui-resizable side-nav-resizable">
  <div id="nav-tree">
    <div id="nav-tree-contents">
      <div id="nav-sync" class="sync"></div>
    </div>
  </div>
  <div id="splitbar" style="-moz-user-select:none;" 
       class="ui-resizable-handle">
  </div>
</div>
<script type="text/javascript">
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
$(document).ready(function(){initNavTree('_attributes.html',''); initResizable(); });
/* @license-end */
</script>
<div id="doc-content">
<!-- window showing the filter options -->
<div id="MSearchSelectWindow"
     onmouseover="return searchBox.OnSearchSelectShow()"
     onmouseout="return searchBox.OnSearchSelectHide()"
     onkeydown="return searchBox.OnSearchSelectKey(event)">
</div>

<!-- iframe showing the search results (closed by default) -->
<div id="MSearchResultsWindow">
<iframe src="javascript:void(0)" frameborder="0" 
        name="MSearchResults" id="MSearchResults">
</iframe>
</div>

<div class="PageDoc"><div class="contents">
<div class="textblock"><h1><a class="anchor" id="secAttributes"></a>
Attributes</h1>
<h2><a class="anchor" id="CB_LargeAttributes"></a>
Creating "Large" HDF5 Attributes</h2>
<dl class="section user"><dt>Problem</dt><dd>You would like to use HDF5 attributes the size of whose values exceeds a few dozen kilobytes</dd></dl>
<dl class="section user"><dt>Solution</dt><dd>A file format change in the HDF5 1.8.x family of library releases made it possible to have attributes larger than about 64 KiB. Ensure that the lower library version bound for new HDF5 item creation is at least 1.8.x, and create larger attributes as usual.<br  />
In the example below, we create an attribute whose value occupies 4 MiB.</dd></dl>
<dl class="section note"><dt>Note</dt><dd>This feature is only supported in HDF5 1.8.x+</dd></dl>
<div class="fragment"><div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;    {</div>
<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;        __label__ fail_attr, fail_aspace, fail_fapl, fail_file;</div>
<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;        <a class="code" href="_h5_ipublic_8h.html#a0045db7ff9c22ad35db6ae91662e1943">hid_t</a> fapl, file, aspace, attr;</div>
<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160; </div>
<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;        <span class="keywordflow">if</span> ((fapl = <a class="code" href="group___p_l_c_r.html#gaf1b11da01d4d45d788c45f8bc5f0cbfa">H5Pcreate</a>(<a class="code" href="_h5_ppublic_8h.html#a60ec2d4334addfc0eda89614598ee38e">H5P_FILE_ACCESS</a>)) &lt; 0) {</div>
<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;            ret_val = EXIT_FAILURE;</div>
<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;            <span class="keywordflow">goto</span> fail_fapl;</div>
<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;        }</div>
<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="preprocessor">#if H5_VERSION_GE(1, 10, 0)</span></div>
<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;        <span class="keywordflow">if</span> (<a class="code" href="group___f_a_p_l.html#gacbe1724e7f70cd17ed687417a1d2a910">H5Pset_libver_bounds</a>(fapl, <a class="code" href="_h5_fpublic_8h.html#a2d963b599894f684571fbd4d5e8a96a2a434ca8def77a117013577c8cec6af0d8">H5F_LIBVER_V18</a>, <a class="code" href="_h5_fpublic_8h.html#a47d050173da48a2b85c730446f0771c0">H5F_LIBVER_LATEST</a>) &lt; 0) {</div>
<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="preprocessor">#elif H5_VERSION_GE(1, 8, 0)</span></div>
<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;        <span class="keywordflow">if</span> (<a class="code" href="group___f_a_p_l.html#gacbe1724e7f70cd17ed687417a1d2a910">H5Pset_libver_bounds</a>(fapl, <a class="code" href="_h5_fpublic_8h.html#a47d050173da48a2b85c730446f0771c0">H5F_LIBVER_LATEST</a>, <a class="code" href="_h5_fpublic_8h.html#a47d050173da48a2b85c730446f0771c0">H5F_LIBVER_LATEST</a>) &lt; 0) {</div>
<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="preprocessor">#else</span></div>
<div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;<span class="preprocessor">#error Only HDF5 1.8.x and later supported.</span></div>
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;<span class="preprocessor">#endif</span></div>
<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;            ret_val = EXIT_FAILURE;</div>
<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;            <span class="keywordflow">goto</span> fail_file;</div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;        }</div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;        <span class="keywordflow">if</span> ((file = <a class="code" href="group___h5_f.html#gae64b51ee9ac0781bc4ccc599d98387f4">H5Fcreate</a>(<span class="stringliteral">&quot;large_attribute.h5&quot;</span>, <a class="code" href="_h5_fpublic_8h.html#a5a2d6726f9ad8d2bca8df2b817e5ad6a">H5F_ACC_TRUNC</a>, <a class="code" href="_h5_ppublic_8h.html#afa85e97bfbf9bf1c58e39263846c568f">H5P_DEFAULT</a>, fapl)) &lt; 0) {</div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;            ret_val = EXIT_FAILURE;</div>
<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;            <span class="keywordflow">goto</span> fail_file;</div>
<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;        }</div>
<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160; </div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;        <span class="keywordflow">if</span> ((aspace = <a class="code" href="group___h5_s.html#ga8e35eea5738b4805856eac7d595254ae">H5Screate_simple</a>(1, (<a class="code" href="_h5public_8h.html#a7f81cce70fb546af88da24d9285d3c1c">hsize_t</a>[]){1024 * 1024}, NULL)) &lt; 0) {</div>
<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;            ret_val = EXIT_FAILURE;</div>
<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;            <span class="keywordflow">goto</span> fail_aspace;</div>
<div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;        }</div>
<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;        <span class="keywordflow">if</span> ((attr = <a class="code" href="group___h5_a.html#ga4a76e4e5ab6eb0fd2aa7990d38d55f24">H5Acreate</a>(file, <span class="stringliteral">&quot;4MiB&quot;</span>, <a class="code" href="group___p_d_t_i_e_e_e.html#ga994ce9ffdd2c77a9352b102a883503ea">H5T_IEEE_F32LE</a>, aspace, <a class="code" href="_h5_ppublic_8h.html#afa85e97bfbf9bf1c58e39263846c568f">H5P_DEFAULT</a>, <a class="code" href="_h5_ppublic_8h.html#afa85e97bfbf9bf1c58e39263846c568f">H5P_DEFAULT</a>)) &lt; 0) {</div>
<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;            ret_val = EXIT_FAILURE;</div>
<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;            <span class="keywordflow">goto</span> fail_attr;</div>
<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;        }</div>
<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160; </div>
<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;        <a class="code" href="group___h5_a.html#gaef4394b661e2c930879e9868e122bdda">H5Aclose</a>(attr);</div>
<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;fail_attr:</div>
<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;        <a class="code" href="group___h5_s.html#ga2b53128a39c8f104c1c9c2a91590fcc1">H5Sclose</a>(aspace);</div>
<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;fail_aspace:</div>
<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;        <a class="code" href="group___h5_f.html#gac55cd91d80822e4f8c2a7f04ea71b124">H5Fclose</a>(file);</div>
<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;fail_file:</div>
<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;        <a class="code" href="group___p_l_c_r.html#ga5dce61149211d3ef319452aa598887fb">H5Pclose</a>(fapl);</div>
<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;fail_fapl:;</div>
<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;    }</div>
<div class="ttc" id="a_h5_fpublic_8h_html_a2d963b599894f684571fbd4d5e8a96a2a434ca8def77a117013577c8cec6af0d8"><div class="ttname"><a href="_h5_fpublic_8h.html#a2d963b599894f684571fbd4d5e8a96a2a434ca8def77a117013577c8cec6af0d8">H5F_LIBVER_V18</a></div><div class="ttdeci">@ H5F_LIBVER_V18</div><div class="ttdef"><b>Definition:</b> H5Fpublic.h:187</div></div>
<div class="ttc" id="a_h5_fpublic_8h_html_a47d050173da48a2b85c730446f0771c0"><div class="ttname"><a href="_h5_fpublic_8h.html#a47d050173da48a2b85c730446f0771c0">H5F_LIBVER_LATEST</a></div><div class="ttdeci">#define H5F_LIBVER_LATEST</div><div class="ttdef"><b>Definition:</b> H5Fpublic.h:195</div></div>
<div class="ttc" id="a_h5_fpublic_8h_html_a5a2d6726f9ad8d2bca8df2b817e5ad6a"><div class="ttname"><a href="_h5_fpublic_8h.html#a5a2d6726f9ad8d2bca8df2b817e5ad6a">H5F_ACC_TRUNC</a></div><div class="ttdeci">#define H5F_ACC_TRUNC</div><div class="ttdef"><b>Definition:</b> H5Fpublic.h:50</div></div>
<div class="ttc" id="a_h5_ipublic_8h_html_a0045db7ff9c22ad35db6ae91662e1943"><div class="ttname"><a href="_h5_ipublic_8h.html#a0045db7ff9c22ad35db6ae91662e1943">hid_t</a></div><div class="ttdeci">int64_t hid_t</div><div class="ttdef"><b>Definition:</b> H5Ipublic.h:60</div></div>
<div class="ttc" id="a_h5_ppublic_8h_html_a60ec2d4334addfc0eda89614598ee38e"><div class="ttname"><a href="_h5_ppublic_8h.html#a60ec2d4334addfc0eda89614598ee38e">H5P_FILE_ACCESS</a></div><div class="ttdeci">#define H5P_FILE_ACCESS</div><div class="ttdef"><b>Definition:</b> H5Ppublic.h:52</div></div>
<div class="ttc" id="a_h5_ppublic_8h_html_afa85e97bfbf9bf1c58e39263846c568f"><div class="ttname"><a href="_h5_ppublic_8h.html#afa85e97bfbf9bf1c58e39263846c568f">H5P_DEFAULT</a></div><div class="ttdeci">#define H5P_DEFAULT</div><div class="ttdef"><b>Definition:</b> H5Ppublic.h:102</div></div>
<div class="ttc" id="a_h5public_8h_html_a7f81cce70fb546af88da24d9285d3c1c"><div class="ttname"><a href="_h5public_8h.html#a7f81cce70fb546af88da24d9285d3c1c">hsize_t</a></div><div class="ttdeci">uint64_t hsize_t</div><div class="ttdef"><b>Definition:</b> H5public.h:297</div></div>
<div class="ttc" id="agroup___f_a_p_l_html_gacbe1724e7f70cd17ed687417a1d2a910"><div class="ttname"><a href="group___f_a_p_l.html#gacbe1724e7f70cd17ed687417a1d2a910">H5Pset_libver_bounds</a></div><div class="ttdeci">herr_t H5Pset_libver_bounds(hid_t plist_id, H5F_libver_t low, H5F_libver_t high)</div><div class="ttdoc">Controls the range of library release versions used when creating objects in a file.</div></div>
<div class="ttc" id="agroup___h5_a_html_ga4a76e4e5ab6eb0fd2aa7990d38d55f24"><div class="ttname"><a href="group___h5_a.html#ga4a76e4e5ab6eb0fd2aa7990d38d55f24">H5Acreate</a></div><div class="ttdeci">#define H5Acreate</div><div class="ttdef"><b>Definition:</b> H5version.h:868</div></div>
<div class="ttc" id="agroup___h5_a_html_gaef4394b661e2c930879e9868e122bdda"><div class="ttname"><a href="group___h5_a.html#gaef4394b661e2c930879e9868e122bdda">H5Aclose</a></div><div class="ttdeci">herr_t H5Aclose(hid_t attr_id)</div><div class="ttdoc">Closes the specified attribute.</div></div>
<div class="ttc" id="agroup___h5_f_html_gac55cd91d80822e4f8c2a7f04ea71b124"><div class="ttname"><a href="group___h5_f.html#gac55cd91d80822e4f8c2a7f04ea71b124">H5Fclose</a></div><div class="ttdeci">herr_t H5Fclose(hid_t file_id)</div><div class="ttdoc">Terminates access to an HDF5 file.</div></div>
<div class="ttc" id="agroup___h5_f_html_gae64b51ee9ac0781bc4ccc599d98387f4"><div class="ttname"><a href="group___h5_f.html#gae64b51ee9ac0781bc4ccc599d98387f4">H5Fcreate</a></div><div class="ttdeci">hid_t H5Fcreate(const char *filename, unsigned flags, hid_t fcpl_id, hid_t fapl_id)</div><div class="ttdoc">Creates an HDF5 file.</div></div>
<div class="ttc" id="agroup___h5_s_html_ga2b53128a39c8f104c1c9c2a91590fcc1"><div class="ttname"><a href="group___h5_s.html#ga2b53128a39c8f104c1c9c2a91590fcc1">H5Sclose</a></div><div class="ttdeci">herr_t H5Sclose(hid_t space_id)</div><div class="ttdoc">Releases and terminates access to a dataspace.</div></div>
<div class="ttc" id="agroup___h5_s_html_ga8e35eea5738b4805856eac7d595254ae"><div class="ttname"><a href="group___h5_s.html#ga8e35eea5738b4805856eac7d595254ae">H5Screate_simple</a></div><div class="ttdeci">hid_t H5Screate_simple(int rank, const hsize_t dims[], const hsize_t maxdims[])</div><div class="ttdoc">Creates a new simple dataspace and opens it for access.</div></div>
<div class="ttc" id="agroup___p_d_t_i_e_e_e_html_ga994ce9ffdd2c77a9352b102a883503ea"><div class="ttname"><a href="group___p_d_t_i_e_e_e.html#ga994ce9ffdd2c77a9352b102a883503ea">H5T_IEEE_F32LE</a></div><div class="ttdeci">#define H5T_IEEE_F32LE</div><div class="ttdef"><b>Definition:</b> H5Tpublic.h:261</div></div>
<div class="ttc" id="agroup___p_l_c_r_html_ga5dce61149211d3ef319452aa598887fb"><div class="ttname"><a href="group___p_l_c_r.html#ga5dce61149211d3ef319452aa598887fb">H5Pclose</a></div><div class="ttdeci">herr_t H5Pclose(hid_t plist_id)</div><div class="ttdoc">Terminates access to a property list.</div></div>
<div class="ttc" id="agroup___p_l_c_r_html_gaf1b11da01d4d45d788c45f8bc5f0cbfa"><div class="ttname"><a href="group___p_l_c_r.html#gaf1b11da01d4d45d788c45f8bc5f0cbfa">H5Pcreate</a></div><div class="ttdeci">hid_t H5Pcreate(hid_t cls_id)</div><div class="ttdoc">Creates a new property list as an instance of a property list class.</div></div>
</div><!-- fragment --> <dl class="section user"><dt>Discussion</dt><dd>Large attributes are supported only in HDF5 versions 1.8.x and higher. This has implications for the accessibility of your HDF5 files and is your call.<br  />
Since there are no size limitations for large attributes, it might seem tempting to mistake them for dataset stand-ins. This is not the case, for at least two reasons:<ol type="1">
<li>Attributes decorate HDF5 objects, have their own local namespace, and can't be link targets.</li>
<li>Attribute I/O treats the attribute value as atomic, i.e., there is no support for partial I/O. A large attribute will always be read or written in its entirety.</li>
</ol>
</dd></dl>
<dl class="section user"><dt>See Also</dt><dd>See <a class="el" href="_accessibility.html#CB_MaintainCompat">Maintaining Compatibility with other HDF5 Library Versions</a> for HDF5 compatibility implications. </dd></dl>
</div></div><!-- contents -->
</div><!-- PageDoc -->
</div><!-- doc-content -->
<!-- start footer part -->
<div id="nav-path" class="navpath"><!-- id is needed for treeview function! -->
  <ul>
    <li class="footer">Generated by
    <a href="http://www.doxygen.org/index.html">
    <img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.9.1 </li>
  </ul>
</div>
</body>
</html>