1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* The example below illustrates the use of the new API with a file that was
* written using the old-style reference API, showing how one can take
* advantage of the automatic type conversion from old reference type to new
* reference type.
*/
#include <stdlib.h>
#include "hdf5.h"
#include <assert.h>
#define H5FILE_NAME "refer_deprec.h5"
#define NDIMS 1 /* Number of dimensions */
#define BUF_SIZE 4 /* Size of example buffer */
#define NREFS 1 /* Number of references */
int
main(void)
{
hid_t file1, dset1, space1;
hsize_t dset1_dims[NDIMS] = {BUF_SIZE};
int dset_buf[BUF_SIZE];
hid_t dset2, space2;
hsize_t dset2_dims[NDIMS] = {NREFS};
hobj_ref_t ref_buf[NREFS] = {0};
H5R_ref_t new_ref_buf[NREFS] = {0};
H5O_type_t obj_type;
int i;
for (i = 0; i < BUF_SIZE; i++)
dset_buf[i] = i;
/* Create file with one dataset and close it */
file1 = H5Fcreate(H5FILE_NAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
space1 = H5Screate_simple(NDIMS, dset1_dims, NULL);
dset1 = H5Dcreate2(file1, "dataset1", H5T_NATIVE_INT, space1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
H5Dwrite(dset1, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset_buf);
H5Dclose(dset1);
H5Sclose(space1);
/**
* Create reference to dataset1 with deprecated API
* (reminder: there is no destroy call for those references)
*/
H5Rcreate(&ref_buf[0], file1, "dataset1", H5R_OBJECT, H5I_INVALID_HID);
/* Store reference in separate dataset using deprecated reference type */
space2 = H5Screate_simple(NDIMS, dset2_dims, NULL);
dset2 = H5Dcreate2(file1, "references", H5T_STD_REF_OBJ, space2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
H5Dwrite(dset2, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_buf);
H5Dclose(dset2);
H5Sclose(space2);
H5Fclose(file1);
/* Read reference from file using new reference type */
file1 = H5Fopen(H5FILE_NAME, H5F_ACC_RDONLY, H5P_DEFAULT);
dset2 = H5Dopen2(file1, "references", H5P_DEFAULT);
H5Dread(dset2, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, new_ref_buf);
H5Dclose(dset2);
/* Access reference and read dataset data through new API */
assert(H5Rget_type((const H5R_ref_t *)&new_ref_buf[0]) == H5R_OBJECT2);
H5Rget_obj_type3((const H5R_ref_t *)&new_ref_buf[0], H5P_DEFAULT, &obj_type);
assert(obj_type == H5O_TYPE_DATASET);
dset1 = H5Ropen_object((const H5R_ref_t *)&new_ref_buf[0], H5P_DEFAULT, H5P_DEFAULT);
H5Dread(dset1, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dset_buf);
H5Dclose(dset1);
H5Rdestroy(&new_ref_buf[0]);
for (i = 0; i < BUF_SIZE; i++)
assert(dset_buf[i] == i);
return 0;
}
|