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|
!****h* ROBODoc/H5LIB
!
! NAME
! MODULE H5LIB
!
! PURPOSE
! This module provides fortran specific helper functions for the HDF library
!
! COPYRIGHT
! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
! Copyright by The HDF Group. *
! Copyright by the Board of Trustees of the University of Illinois. *
! All rights reserved. *
! *
! This file is part of HDF5. The full HDF5 copyright notice, including *
! terms governing use, modification, and redistribution, is contained in *
! the COPYING file, which can be found at the root of the source code *
! distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
! If you do not have access to either file, you may request a copy from *
! help@hdfgroup.org. *
! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
!
! NOTES
! _____ __ __ _____ ____ _____ _______ _ _ _______
! |_ _| \/ | __ \ / __ \| __ \__ __|/\ | \ | |__ __|
! **** | | | \ / | |__) | | | | |__) | | | / \ | \| | | | ****
! **** | | | |\/| | ___/| | | | _ / | | / /\ \ | . ` | | | ****
! **** _| |_| | | | | | |__| | | \ \ | |/ ____ \| |\ | | | ****
! |_____|_| |_|_| \____/|_| \_\ |_/_/ \_\_| \_| |_|
!
! If you add a new function you must add the function name to the
! Windows dll file 'hdf5_fortrandll.def.in' in the fortran/src directory.
! This is needed for Windows based operating systems.
!
!*****
#include <H5config_f.inc>
MODULE H5LIB
USE, INTRINSIC :: ISO_C_BINDING, ONLY : C_PTR, C_INTPTR_T
USE H5GLOBAL
IMPLICIT NONE
PRIVATE
!
! H5F flags declaration
!
INTEGER, PARAMETER :: H5F_FLAGS_LEN = 19
INTEGER, DIMENSION(1:H5F_FLAGS_LEN) :: H5F_flags
!
! H5generic flags declaration
!
INTEGER, PARAMETER :: H5generic_FLAGS_LEN = 9
INTEGER, DIMENSION(1:H5generic_FLAGS_LEN) :: H5generic_flags
INTEGER, PARAMETER :: H5generic_haddr_FLAGS_LEN = 1
INTEGER(HADDR_T), DIMENSION(1:H5generic_haddr_FLAGS_LEN) :: H5generic_haddr_flags
!
! H5G flags declaration
!
INTEGER, PARAMETER :: H5G_FLAGS_LEN = 12
INTEGER, DIMENSION(1:H5G_FLAGS_LEN) :: H5G_flags
!
! H5D flags declaration
!
INTEGER, PARAMETER :: H5D_FLAGS_LEN = 29
INTEGER, DIMENSION(1:H5D_FLAGS_LEN) :: H5D_flags
INTEGER, PARAMETER :: H5D_SIZE_FLAGS_LEN = 2
INTEGER(SIZE_T), DIMENSION(1:H5D_SIZE_FLAGS_LEN) :: H5D_size_flags
!
! H5E flags declaration
!
INTEGER, PARAMETER :: H5E_FLAGS_LEN = 4
INTEGER, DIMENSION(1:H5E_FLAGS_LEN) :: H5E_flags
INTEGER, PARAMETER :: H5E_HID_FLAGS_LEN = 1
INTEGER(HID_T), DIMENSION(1:H5E_HID_FLAGS_LEN) :: H5E_hid_flags
!
! H5FD flags declaration
!
INTEGER, PARAMETER :: H5FD_FLAGS_LEN = 11
INTEGER, DIMENSION(1:H5FD_FLAGS_LEN) :: H5FD_flags
!
! H5FD file drivers flags declaration
!
INTEGER, PARAMETER :: H5FD_HID_FLAGS_LEN = 7
INTEGER(HID_T), DIMENSION(1:H5FD_HID_FLAGS_LEN) :: H5FD_hid_flags
!
! H5I flags declaration
!
INTEGER, PARAMETER :: H5I_FLAGS_LEN = 17
INTEGER, DIMENSION(1:H5I_FLAGS_LEN) :: H5I_flags
!
! H5L flags declaration
!
INTEGER, PARAMETER :: H5L_FLAGS_LEN = 6
INTEGER, DIMENSION(1:H5L_FLAGS_LEN) :: H5L_flags
!
! H5O flags declaration
!
INTEGER, PARAMETER :: H5O_FLAGS_LEN = 33
INTEGER, DIMENSION(1:H5O_FLAGS_LEN) :: H5O_flags
!
! H5P flags declaration
!
INTEGER, PARAMETER :: H5P_FLAGS_LEN = 18
INTEGER(HID_T), DIMENSION(1:H5P_FLAGS_LEN) :: H5P_flags
!
! H5P integers flags declaration
!
INTEGER, PARAMETER :: H5P_FLAGS_INT_LEN = 2
INTEGER, DIMENSION(1:H5P_FLAGS_INT_LEN) :: H5P_flags_int
!
! H5R flags declaration
!
INTEGER, PARAMETER :: H5R_FLAGS_LEN = 2
INTEGER, DIMENSION(1:H5R_FLAGS_LEN) :: H5R_flags
!
! H5S flags declaration
!
INTEGER, PARAMETER :: H5S_FLAGS_LEN = 18
INTEGER, DIMENSION(1:H5S_FLAGS_LEN) :: H5S_flags
INTEGER, PARAMETER :: H5S_HSIZE_FLAGS_LEN = 1
INTEGER(HSIZE_T), DIMENSION(1:H5S_HSIZE_FLAGS_LEN) :: H5S_hsize_flags
INTEGER, PARAMETER :: H5S_HID_FLAGS_LEN = 1
INTEGER(HSIZE_T), DIMENSION(1:H5S_HID_FLAGS_LEN) :: H5S_hid_flags
!
! H5T flags declaration
!
INTEGER, PARAMETER :: H5T_FLAGS_LEN = 35
INTEGER, DIMENSION(1:H5T_FLAGS_LEN) :: H5T_flags
!
! H5VL flags declaration
!
INTEGER, PARAMETER :: H5VL_FLAGS_LEN = 67
INTEGER, DIMENSION(1:H5VL_FLAGS_LEN) :: H5VL_flags
!
! H5Z flags declaration
!
INTEGER, PARAMETER :: H5Z_FLAGS_LEN = 20
INTEGER, DIMENSION(1:H5Z_FLAGS_LEN) :: H5Z_flags
!
! H5 Library flags declaration
!
INTEGER, PARAMETER :: H5LIB_FLAGS_LEN = 2
INTEGER, DIMENSION(1:H5LIB_FLAGS_LEN) :: H5LIB_flags
PUBLIC :: h5open_f, h5close_f, h5get_libversion_f, h5dont_atexit_f, h5kind_to_type, h5offsetof, h5gmtime
PUBLIC :: h5garbage_collect_f, h5check_version_f
CONTAINS
!****s* H5LIB/h5open_f
!
! NAME
! h5open_f
!
! PURPOSE
! Initializes HDF5 Fortran interface.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! August 12, 1999
!
! HISTORY
! Explicit Fortran interfaces were added for
! called C functions (it is needed for Windows
! port). February 28, 2001
!
! Removed call to h5open_c since this may cause a problem for an
! application that uses HDF5 library outside HDF5 Fortran APIs.
! October 13, 2011
! Fortran90 Interface:
SUBROUTINE h5open_f(error)
USE H5F, ONLY : h5fget_obj_count_f, H5OPEN_NUM_OBJ
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
INTEGER(SIZE_T) :: H5OPEN_NUM_OBJ_LOC = 0
!*****
INTERFACE
INTEGER FUNCTION h5init_types_c(p_types, f_types, i_types) &
BIND(C,NAME='h5init_types_c')
IMPORT :: HID_T
IMPORT :: PREDEF_TYPES_LEN, FLOATING_TYPES_LEN, INTEGER_TYPES_LEN
IMPLICIT NONE
INTEGER(HID_T), DIMENSION(1:PREDEF_TYPES_LEN) :: p_types
INTEGER(HID_T), DIMENSION(1:FLOATING_TYPES_LEN) :: f_types
INTEGER(HID_T), DIMENSION(1:INTEGER_TYPES_LEN) :: i_types
END FUNCTION h5init_types_c
INTEGER FUNCTION h5init_flags_c(i_H5D_flags, &
i_H5D_size_flags,&
i_H5E_flags, &
i_H5E_hid_flags, &
i_H5F_flags, &
i_H5FD_flags, &
i_H5FD_hid_flags, &
i_H5G_flags, &
i_H5I_flags, &
i_H5L_flags, &
i_H5O_flags, &
i_H5P_flags, &
i_H5P_flags_int, &
i_H5R_flags, &
i_H5S_flags, &
i_H5S_hid_flags, &
i_H5S_hsize_flags, &
i_H5T_flags, &
i_H5VL_flags, &
i_H5Z_flags, &
i_H5generic_flags, &
i_H5generic_haddr_flags) &
BIND(C,NAME='h5init_flags_c')
IMPORT :: HID_T, SIZE_T, HSIZE_T, HADDR_T
IMPORT :: H5D_FLAGS_LEN, H5D_SIZE_FLAGS_LEN, &
H5E_FLAGS_LEN, H5E_HID_FLAGS_LEN, &
H5F_FLAGS_LEN, H5G_FLAGS_LEN, H5FD_FLAGS_LEN, &
H5FD_HID_FLAGS_LEN, H5I_FLAGS_LEN, H5L_FLAGS_LEN, &
H5O_FLAGS_LEN, H5P_FLAGS_LEN, H5P_FLAGS_INT_LEN, &
H5R_FLAGS_LEN, H5S_FLAGS_LEN, H5S_HID_FLAGS_LEN, H5S_HSIZE_FLAGS_LEN, &
H5T_FLAGS_LEN, H5VL_FLAGS_LEN, H5Z_FLAGS_LEN, H5generic_FLAGS_LEN, H5generic_haddr_FLAGS_LEN
IMPLICIT NONE
INTEGER , DIMENSION(1:H5D_FLAGS_LEN) :: i_H5D_flags
INTEGER(SIZE_T) , DIMENSION(1:H5D_SIZE_FLAGS_LEN) :: i_H5D_size_flags
INTEGER , DIMENSION(1:H5E_FLAGS_LEN) :: i_H5E_flags
INTEGER(HID_T) , DIMENSION(1:H5E_HID_FLAGS_LEN) :: i_H5E_hid_flags
INTEGER , DIMENSION(1:H5F_FLAGS_LEN) :: i_H5F_flags
INTEGER , DIMENSION(1:H5G_FLAGS_LEN) :: i_H5G_flags
INTEGER , DIMENSION(1:H5FD_FLAGS_LEN) :: i_H5FD_flags
INTEGER(HID_T) , DIMENSION(1:H5FD_HID_FLAGS_LEN) :: i_H5FD_hid_flags
INTEGER , DIMENSION(1:H5I_FLAGS_LEN) :: i_H5I_flags
INTEGER , DIMENSION(1:H5L_FLAGS_LEN) :: i_H5L_flags
INTEGER , DIMENSION(1:H5O_FLAGS_LEN) :: i_H5O_flags
INTEGER(HID_T) , DIMENSION(1:H5P_FLAGS_LEN) :: i_H5P_flags
INTEGER , DIMENSION(1:H5P_FLAGS_INT_LEN) :: i_H5P_flags_int
INTEGER , DIMENSION(1:H5R_FLAGS_LEN) :: i_H5R_flags
INTEGER , DIMENSION(1:H5S_FLAGS_LEN) :: i_H5S_flags
INTEGER(HID_T) , DIMENSION(1:H5S_HID_FLAGS_LEN) :: i_H5S_hid_flags
INTEGER(HSIZE_T), DIMENSION(1:H5S_HSIZE_FLAGS_LEN) :: i_H5S_hsize_flags
INTEGER , DIMENSION(1:H5T_FLAGS_LEN) :: i_H5T_flags
INTEGER , DIMENSION(1:H5VL_FLAGS_LEN) :: i_H5VL_flags
INTEGER , DIMENSION(1:H5Z_FLAGS_LEN) :: i_H5Z_flags
INTEGER , DIMENSION(1:H5generic_FLAGS_LEN) :: i_H5generic_flags
INTEGER(HADDR_T), DIMENSION(1:H5generic_haddr_FLAGS_LEN) :: i_H5generic_haddr_flags
END FUNCTION h5init_flags_c
INTEGER FUNCTION h5init1_flags_c( i_H5LIB_flags ) &
BIND(C,NAME='h5init1_flags_c')
IMPORT :: H5LIB_FLAGS_LEN
IMPLICIT NONE
INTEGER, DIMENSION(1:H5LIB_FLAGS_LEN) :: i_H5LIB_flags
END FUNCTION h5init1_flags_c
END INTERFACE
error = h5init_types_c(predef_types, floating_types, integer_types)
H5T_NATIVE_INTEGER_KIND(1:5) = predef_types(1:5)
H5T_NATIVE_INTEGER = predef_types(6)
H5T_NATIVE_REAL = predef_types(7)
H5T_NATIVE_DOUBLE = predef_types(8)
H5T_NATIVE_CHARACTER = predef_types(9)
H5T_STD_REF_OBJ = predef_types(10)
H5T_STD_REF_DSETREG = predef_types(11)
H5T_NATIVE_REAL_C_FLOAT = predef_types(12)
H5T_NATIVE_REAL_C_DOUBLE = predef_types(13)
H5T_NATIVE_REAL_C_LONG_DOUBLE = predef_types(14)
H5T_NATIVE_B8 = predef_types(15)
H5T_NATIVE_B16 = predef_types(16)
H5T_NATIVE_B32 = predef_types(17)
H5T_NATIVE_B64 = predef_types(18)
H5T_NATIVE_FLOAT_128 = predef_types(19)
H5T_IEEE_F32BE = floating_types(1)
H5T_IEEE_F32LE = floating_types(2)
H5T_IEEE_F64BE = floating_types(3)
H5T_IEEE_F64LE = floating_types(4)
H5T_STD_I8BE = integer_types(1)
H5T_STD_I8LE = integer_types(2)
H5T_STD_I16BE = integer_types(3)
H5T_STD_I16LE = integer_types(4)
H5T_STD_I32BE = integer_types(5)
H5T_STD_I32LE = integer_types(6)
H5T_STD_I64BE = integer_types(7)
H5T_STD_I64LE = integer_types(8)
H5T_STD_U8BE = integer_types(9)
H5T_STD_U8LE = integer_types(10)
H5T_STD_U16BE = integer_types(11)
H5T_STD_U16LE = integer_types(12)
H5T_STD_U32BE = integer_types(13)
H5T_STD_U32LE = integer_types(14)
H5T_STD_U64BE = integer_types(15)
H5T_STD_U64LE = integer_types(16)
H5T_STRING = integer_types(17)
H5T_STD_B8BE = integer_types(18)
H5T_STD_B8LE = integer_types(19)
H5T_STD_B16BE = integer_types(20)
H5T_STD_B16LE = integer_types(21)
H5T_STD_B32BE = integer_types(22)
H5T_STD_B32LE = integer_types(23)
H5T_STD_B64BE = integer_types(24)
H5T_STD_B64LE = integer_types(25)
H5T_FORTRAN_S1 = integer_types(26)
H5T_C_S1 = integer_types(27)
error = error + h5init_flags_c(H5D_flags, &
H5D_size_flags, &
H5E_flags, &
H5E_hid_flags, &
H5F_flags, &
H5FD_flags, &
H5FD_hid_flags, &
H5G_flags, &
H5I_flags, &
H5L_flags, &
H5O_flags, &
H5P_flags, &
H5P_flags_int, &
H5R_flags, &
H5S_flags, &
H5S_hid_flags, &
H5S_hsize_flags, &
H5T_flags, &
H5VL_flags, &
H5Z_flags, &
H5generic_flags,&
H5generic_haddr_flags)
!
! H5F flags
!
H5F_ACC_RDWR_F = H5F_flags(1)
H5F_ACC_RDONLY_F = H5F_flags(2)
H5F_ACC_TRUNC_F = H5F_flags(3)
H5F_ACC_EXCL_F = H5F_flags(4)
H5F_ACC_DEBUG_F = H5F_flags(5)
H5F_SCOPE_LOCAL_F = H5F_flags(6)
H5F_SCOPE_GLOBAL_F = H5F_flags(7)
H5F_CLOSE_DEFAULT_F = H5F_flags(8)
H5F_CLOSE_WEAK_F = H5F_flags(9)
H5F_CLOSE_SEMI_F = H5F_flags(10)
H5F_CLOSE_STRONG_F = H5F_flags(11)
H5F_OBJ_FILE_F = H5F_flags(12)
H5F_OBJ_DATASET_F = H5F_flags(13)
H5F_OBJ_GROUP_F = H5F_flags(14)
H5F_OBJ_DATATYPE_F = H5F_flags(15)
H5F_OBJ_ALL_F = H5F_flags(16)
H5F_LIBVER_EARLIEST_F = H5F_flags(17)
H5F_LIBVER_LATEST_F = H5F_flags(18)
H5F_UNLIMITED_F = H5F_flags(19)
!
! H5generic flags
!
H5_INDEX_UNKNOWN_F = H5generic_flags(1)
H5_INDEX_NAME_F = H5generic_flags(2)
H5_INDEX_CRT_ORDER_F = H5generic_flags(3)
H5_INDEX_N_F = H5generic_flags(4)
H5_ITER_UNKNOWN_F = H5generic_flags(5)
H5_ITER_INC_F = H5generic_flags(6)
H5_ITER_DEC_F = H5generic_flags(7)
H5_ITER_NATIVE_F = H5generic_flags(8)
H5_ITER_N_F = H5generic_flags(9)
HADDR_UNDEF_F = H5generic_haddr_flags(1)
!
! H5G flags
!
H5G_UNKNOWN_F = H5G_flags(1)
H5G_GROUP_F = H5G_flags(2)
H5G_DATASET_F = H5G_flags(3)
H5G_TYPE_F = H5G_flags(4)
H5G_SAME_LOC_F = H5G_flags(5)
H5G_LINK_ERROR_F = H5G_flags(6)
H5G_LINK_HARD_F = H5G_flags(7)
H5G_LINK_SOFT_F = H5G_flags(8)
H5G_STORAGE_TYPE_UNKNOWN_F = H5G_flags(9)
H5G_STORAGE_TYPE_SYMBOL_TABLE_F = H5G_flags(10)
H5G_STORAGE_TYPE_COMPACT_F = H5G_flags(11)
H5G_STORAGE_TYPE_DENSE_F = H5G_flags(12)
!
! H5D flags
!
H5D_COMPACT_F = H5D_flags(1)
H5D_CONTIGUOUS_F = H5D_flags(2)
H5D_CHUNKED_F = H5D_flags(3)
H5D_ALLOC_TIME_ERROR_F = H5D_flags(4)
H5D_ALLOC_TIME_DEFAULT_F = H5D_flags(5)
H5D_ALLOC_TIME_EARLY_F = H5D_flags(6)
H5D_ALLOC_TIME_LATE_F = H5D_flags(7)
H5D_ALLOC_TIME_INCR_F = H5D_flags(8)
H5D_SPACE_STS_ERROR_F = H5D_flags(9)
H5D_SPACE_STS_NOT_ALLOCATED_F = H5D_flags(10)
H5D_SPACE_STS_PART_ALLOCATED_F = H5D_flags(11)
H5D_SPACE_STS_ALLOCATED_F = H5D_flags(12)
H5D_FILL_TIME_ERROR_F = H5D_flags(13)
H5D_FILL_TIME_ALLOC_F = H5D_flags(14)
H5D_FILL_TIME_NEVER_F = H5D_flags(15)
H5D_FILL_VALUE_ERROR_F = H5D_flags(16)
H5D_FILL_VALUE_UNDEFINED_F = H5D_flags(17)
H5D_FILL_VALUE_DEFAULT_F = H5D_flags(18)
H5D_FILL_VALUE_USER_DEFINED_F = H5D_flags(19)
H5D_CHUNK_CACHE_W0_DFLT_F = H5D_flags(20)
H5D_MPIO_NO_COLLECTIVE_F = H5D_flags(21)
H5D_MPIO_CHUNK_INDEPENDENT_F = H5D_flags(22)
H5D_MPIO_CHUNK_COLLECTIVE_F = H5D_flags(23)
H5D_MPIO_CHUNK_MIXED_F = H5D_flags(24)
H5D_MPIO_CONTIG_COLLECTIVE_F = H5D_flags(25)
H5D_VDS_ERROR_F = H5D_flags(26)
H5D_VDS_FIRST_MISSING_F = H5D_flags(27)
H5D_VDS_LAST_AVAILABLE_F = H5D_flags(28)
H5D_VIRTUAL_F = H5D_flags(29)
H5D_CHUNK_CACHE_NSLOTS_DFLT_F = H5D_size_flags(1)
H5D_CHUNK_CACHE_NBYTES_DFLT_F = H5D_size_flags(2)
!
! H5E flags
!
H5E_DEFAULT_F = H5E_hid_flags(1)
H5E_MAJOR_F = H5E_flags(1)
H5E_MINOR_F = H5E_flags(2)
H5E_WALK_UPWARD_F = H5E_flags(3)
H5E_WALK_DOWNWARD_F = H5E_flags(4)
!
! H5FD flags
!
H5FD_MPIO_INDEPENDENT_F = H5FD_flags(1)
H5FD_MPIO_COLLECTIVE_F = H5FD_flags(2)
H5FD_MEM_NOLIST_F = H5FD_flags(3)
H5FD_MEM_DEFAULT_F = H5FD_flags(4)
H5FD_MEM_SUPER_F = H5FD_flags(5)
H5FD_MEM_BTREE_F = H5FD_flags(6)
H5FD_MEM_DRAW_F = H5FD_flags(7)
H5FD_MEM_GHEAP_F = H5FD_flags(8)
H5FD_MEM_LHEAP_F = H5FD_flags(9)
H5FD_MEM_OHDR_F = H5FD_flags(10)
H5FD_MEM_NTYPES_F = H5FD_flags(11)
!
! H5FD file driver flags
!
H5FD_CORE_F = H5FD_hid_flags(1)
H5FD_FAMILY_F = H5FD_hid_flags(2)
H5FD_LOG_F = H5FD_hid_flags(3)
H5FD_MPIO_F = H5FD_hid_flags(4)
H5FD_MULTI_F = H5FD_hid_flags(5)
H5FD_SEC2_F = H5FD_hid_flags(6)
H5FD_STDIO_F = H5FD_hid_flags(7)
!
! H5I flags declaration
!
H5I_FILE_F = H5I_flags(1)
H5I_GROUP_F = H5I_flags(2)
H5I_DATATYPE_F = H5I_flags(3)
H5I_DATASPACE_F = H5I_flags(4)
H5I_DATASET_F = H5I_flags(5)
H5I_ATTR_F = H5I_flags(6)
H5I_BADID_F = H5I_flags(7)
H5I_UNINIT_F = H5I_flags(8)
H5I_VFL_F = H5I_flags(9)
H5I_VOL_F = H5I_flags(10)
H5I_GENPROP_CLS_F = H5I_flags(11)
H5I_GENPROP_LST_F = H5I_flags(12)
H5I_ERROR_CLASS_F = H5I_flags(13)
H5I_ERROR_MSG_F = H5I_flags(14)
H5I_ERROR_STACK_F = H5I_flags(15)
H5I_NTYPES_F = H5I_flags(16)
H5I_INVALID_HID_F = H5I_flags(17)
!
! H5L flags
!
H5L_TYPE_ERROR_F = H5L_flags(1)
H5L_TYPE_HARD_F = H5L_flags(2)
H5L_TYPE_SOFT_F = H5L_flags(3)
H5L_TYPE_EXTERNAL_F = H5L_flags(4)
H5L_SAME_LOC_F = H5L_flags(5)
H5L_LINK_CLASS_T_VERS_F = H5L_flags(6)
!
! H5O flags
!
H5O_COPY_SHALLOW_HIERARCHY_F = h5o_flags(1)
H5O_COPY_EXPAND_SOFT_LINK_F = h5o_flags(2)
H5O_COPY_EXPAND_EXT_LINK_F = h5o_flags(3)
H5O_COPY_EXPAND_REFERENCE_F = h5o_flags(4)
H5O_COPY_WITHOUT_ATTR_FLAG_F = h5o_flags(5)
H5O_COPY_PRESERVE_NULL_FLAG_F = h5o_flags(6)
H5O_COPY_ALL_F = h5o_flags(7)
H5O_SHMESG_NONE_FLAG_F = h5o_flags(8)
H5O_SHMESG_SDSPACE_FLAG_F = h5o_flags(9)
H5O_SHMESG_DTYPE_FLAG_F = h5o_flags(10)
H5O_SHMESG_FILL_FLAG_F = h5o_flags(11)
H5O_SHMESG_PLINE_FLAG_F = h5o_flags(12)
H5O_SHMESG_ATTR_FLAG_F = h5o_flags(13)
H5O_SHMESG_ALL_FLAG_F = h5o_flags(14)
H5O_HDR_CHUNK0_SIZE_F = h5o_flags(15)
H5O_HDR_ATTR_CRT_ORDER_TRACK_F = h5o_flags(16)
H5O_HDR_ATTR_CRT_ORDER_INDEX_F = h5o_flags(17)
H5O_HDR_ATTR_STORE_PHASE_CHA_F = h5o_flags(18)
H5O_HDR_STORE_TIMES_F = h5o_flags(19)
H5O_HDR_ALL_FLAGS_F = h5o_flags(20)
H5O_SHMESG_MAX_NINDEXES_F = h5o_flags(21)
H5O_SHMESG_MAX_LIST_SIZE_F = h5o_flags(22)
H5O_TYPE_UNKNOWN_F = h5o_flags(23)
H5O_TYPE_GROUP_F = h5o_flags(24)
H5O_TYPE_DATASET_F = h5o_flags(25)
H5O_TYPE_NAMED_DATATYPE_F = h5o_flags(26)
H5O_TYPE_NTYPES_F = h5o_flags(27)
H5O_INFO_ALL_F = h5o_flags(28)
H5O_INFO_BASIC_F = h5o_flags(29)
H5O_INFO_TIME_F = h5o_flags(30)
H5O_INFO_NUM_ATTRS_F = h5o_flags(31)
H5O_INFO_HDR_F = h5o_flags(32)
H5O_INFO_META_SIZE_F = h5o_flags(33)
!
! H5P flags
!
H5P_FILE_CREATE_F = H5P_flags(1)
H5P_FILE_ACCESS_F = H5P_flags(2)
H5P_DATASET_CREATE_F = H5P_flags(3)
H5P_DATASET_XFER_F = H5P_flags(4)
H5P_FILE_MOUNT_F = H5P_flags(5)
H5P_DEFAULT_F = H5P_flags(6)
H5P_ROOT_F = H5P_flags(7)
H5P_OBJECT_CREATE_F = H5P_flags(8)
H5P_DATASET_ACCESS_F = H5P_flags(9)
H5P_GROUP_CREATE_F = H5P_flags(10)
H5P_GROUP_ACCESS_F = H5P_flags(11)
H5P_DATATYPE_CREATE_F = H5P_flags(12)
H5P_DATATYPE_ACCESS_F = H5P_flags(13)
H5P_STRING_CREATE_F = H5P_flags(14)
H5P_ATTRIBUTE_CREATE_F = H5P_flags(15)
H5P_OBJECT_COPY_F = H5P_flags(16)
H5P_LINK_CREATE_F = H5P_flags(17)
H5P_LINK_ACCESS_F = H5P_flags(18)
!
! H5P integers flags
!
H5P_CRT_ORDER_INDEXED_F = H5P_flags_int(1)
H5P_CRT_ORDER_TRACKED_F = H5P_flags_int(2)
!
! H5R flags
!
H5R_OBJECT_F = H5R_flags(1)
H5R_DATASET_REGION_F = H5R_flags(2)
!
! H5S flags
!
H5S_ALL_F = H5S_hid_flags(1)
H5S_UNLIMITED_F = H5S_hsize_flags(1)
H5S_SCALAR_F = H5S_flags(1)
H5S_SIMPLE_F = H5S_flags(2)
H5S_NULL_F = H5S_flags(3)
H5S_SELECT_SET_F = H5S_flags(4)
H5S_SELECT_OR_F = H5S_flags(5)
H5S_SELECT_NOOP_F = H5S_flags(6)
H5S_SELECT_AND_F = H5S_flags(7)
H5S_SELECT_XOR_F = H5S_flags(8)
H5S_SELECT_NOTB_F = H5S_flags(9)
H5S_SELECT_NOTA_F = H5S_flags(10)
H5S_SELECT_APPEND_F = H5S_flags(11)
H5S_SELECT_PREPEND_F = H5S_flags(12)
H5S_SELECT_INVALID_F = H5S_flags(13)
H5S_SEL_ERROR_F = H5S_flags(14)
H5S_SEL_NONE_F = H5S_flags(15)
H5S_SEL_POINTS_F = H5S_flags(16)
H5S_SEL_HYPERSLABS_F = H5S_flags(17)
H5S_SEL_ALL_F = H5S_flags(18)
!
! H5T flags declaration
!
H5T_NO_CLASS_F = H5T_flags(1)
H5T_INTEGER_F = H5T_flags(2)
H5T_FLOAT_F = H5T_flags(3)
H5T_TIME_F = H5T_flags(4)
H5T_STRING_F = H5T_flags(5)
H5T_BITFIELD_F = H5T_flags(6)
H5T_OPAQUE_F = H5T_flags(7)
H5T_COMPOUND_F = H5T_flags(8)
H5T_REFERENCE_F = H5T_flags(9)
H5T_ENUM_F = H5T_flags(10)
H5T_ORDER_LE_F = H5T_flags(11)
H5T_ORDER_BE_F = H5T_flags(12)
H5T_ORDER_MIXED_F = H5T_flags(13)
H5T_ORDER_VAX_F = H5T_flags(14)
H5T_ORDER_NONE_F = H5T_flags(15)
H5T_PAD_ZERO_F = H5T_flags(16)
H5T_PAD_ONE_F = H5T_flags(17)
H5T_PAD_BACKGROUND_F = H5T_flags(18)
H5T_PAD_ERROR_F = H5T_flags(19)
H5T_SGN_NONE_F = H5T_flags(20)
H5T_SGN_2_F = H5T_flags(21)
H5T_SGN_ERROR_F = H5T_flags(22)
H5T_NORM_IMPLIED_F = H5T_flags(23)
H5T_NORM_MSBSET_F = H5T_flags(24)
H5T_NORM_NONE_F = H5T_flags(25)
H5T_CSET_ASCII_F = H5T_flags(26)
H5T_CSET_UTF8_F = H5T_flags(27)
H5T_STR_NULLTERM_F = H5T_flags(28)
H5T_STR_NULLPAD_F = H5T_flags(29)
H5T_STR_SPACEPAD_F = H5T_flags(30)
H5T_STR_ERROR_F = H5T_flags(31)
H5T_VLEN_F = H5T_flags(32)
H5T_ARRAY_F = H5T_flags(33)
H5T_DIR_ASCEND_F = H5T_flags(34)
H5T_DIR_DESCEND_F = H5T_flags(35)
!
! H5VL flags declaration
!
H5VL_ATTR_GET_ACPL_F = H5VL_flags(1)
H5VL_ATTR_GET_INFO_F = H5VL_flags(2)
H5VL_ATTR_GET_NAME_F = H5VL_flags(3)
H5VL_ATTR_GET_SPACE_F = H5VL_flags(4)
H5VL_ATTR_GET_STORAGE_SIZE_F = H5VL_flags(5)
H5VL_ATTR_GET_TYPE_F = H5VL_flags(6)
H5VL_ATTR_DELETE_F = H5VL_flags(7)
H5VL_ATTR_EXISTS_F = H5VL_flags(8)
H5VL_ATTR_ITER_F = H5VL_flags(9)
H5VL_ATTR_RENAME_F = H5VL_flags(10)
H5VL_DATASET_GET_DAPL_F = H5VL_flags(11)
H5VL_DATASET_GET_DCPL_F = H5VL_flags(12)
H5VL_DATASET_GET_OFFSET_F = H5VL_flags(13)
H5VL_DATASET_GET_SPACE_F = H5VL_flags(14)
H5VL_DATASET_GET_SPACE_STATUS_F = H5VL_flags(15)
H5VL_DATASET_GET_STORAGE_SIZE_F = H5VL_flags(16)
H5VL_DATASET_GET_TYPE_F = H5VL_flags(17)
H5VL_DATASET_SET_EXTENT_F = H5VL_flags(18)
H5VL_DATASET_FLUSH_F = H5VL_flags(19)
H5VL_DATASET_REFRESH_F = H5VL_flags(20)
H5VL_DATATYPE_GET_BINARY_F = H5VL_flags(21)
H5VL_DATATYPE_GET_TCPL_F = H5VL_flags(22)
H5VL_DATATYPE_FLUSH_F = H5VL_flags(23)
H5VL_DATATYPE_REFRESH_F = H5VL_flags(24)
H5VL_FILE_GET_FAPL_F = H5VL_flags(25)
H5VL_FILE_GET_FCPL_F = H5VL_flags(26)
H5VL_FILE_GET_INTENT_F = H5VL_flags(27)
H5VL_FILE_GET_NAME_F = H5VL_flags(28)
H5VL_FILE_GET_OBJ_COUNT_F = H5VL_flags(29)
H5VL_FILE_GET_OBJ_IDS_F = H5VL_flags(30)
H5VL_FILE_FLUSH_F = H5VL_flags(31)
H5VL_FILE_REOPEN_F = H5VL_flags(32)
H5VL_FILE_MOUNT_F = H5VL_flags(33)
H5VL_FILE_UNMOUNT_F = H5VL_flags(34)
H5VL_FILE_IS_ACCESSIBLE_F = H5VL_flags(35)
H5VL_FILE_CACHE_VOL_CONN_F = H5VL_flags(36)
H5VL_GROUP_GET_GCPL_F = H5VL_flags(37)
H5VL_GROUP_GET_INFO_F = H5VL_flags(38)
H5VL_GROUP_FLUSH_F = H5VL_flags(39)
H5VL_GROUP_REFRESH_F = H5VL_flags(40)
H5VL_LINK_CREATE_HARD_F = H5VL_flags(41)
H5VL_LINK_CREATE_SOFT_F = H5VL_flags(42)
H5VL_LINK_CREATE_UD_F = H5VL_flags(43)
H5VL_LINK_GET_INFO_F = H5VL_flags(44)
H5VL_LINK_GET_NAME_F = H5VL_flags(45)
H5VL_LINK_GET_VAL_F = H5VL_flags(46)
H5VL_LINK_DELETE_F = H5VL_flags(47)
H5VL_LINK_EXISTS_F = H5VL_flags(48)
H5VL_LINK_ITER_F = H5VL_flags(49)
H5VL_REF_GET_NAME_F = H5VL_flags(50)
H5VL_REF_GET_REGION_F = H5VL_flags(51)
H5VL_REF_GET_TYPE_F = H5VL_flags(52)
H5VL_ID_GET_NAME_F = H5VL_flags(53)
H5VL_OBJECT_CHANGE_REF_COUNT_F = H5VL_flags(54)
H5VL_OBJECT_EXISTS_F = H5VL_flags(55)
H5VL_OBJECT_VISIT_F = H5VL_flags(56)
H5VL_REF_CREATE_F = H5VL_flags(57)
H5VL_OBJECT_FLUSH_F = H5VL_flags(58)
H5VL_OBJECT_REFRESH_F = H5VL_flags(59)
H5VL_REQUEST_WAITANY_F = H5VL_flags(60)
H5VL_REQUEST_WAITSOME_F = H5VL_flags(61)
H5VL_REQUEST_WAITALL_F = H5VL_flags(62)
H5VL_OBJECT_BY_SELF_F = H5VL_flags(63)
H5VL_OBJECT_BY_NAME_F = H5VL_flags(64)
H5VL_OBJECT_BY_IDX_F = H5VL_flags(65)
H5VL_OBJECT_BY_ADDR_F = H5VL_flags(66)
H5VL_OBJECT_BY_REF_F = H5VL_flags(67)
!
! H5Z flags
!
H5Z_FILTER_ERROR_F = H5Z_flags(1)
H5Z_FILTER_NONE_F = H5Z_flags(2)
H5Z_FILTER_DEFLATE_F = H5Z_flags(3)
H5Z_FILTER_SHUFFLE_F = H5Z_flags(4)
H5Z_FILTER_FLETCHER32_F = H5Z_flags(5)
H5Z_ERROR_EDC_F = H5Z_flags(6)
H5Z_DISABLE_EDC_F = H5Z_flags(7)
H5Z_ENABLE_EDC_F = H5Z_flags(8)
H5Z_NO_EDC_F = H5Z_flags(9)
H5Z_FILTER_SZIP_F = H5Z_flags(10)
H5Z_FLAG_OPTIONAL_F = H5Z_flags(11)
H5Z_FILTER_ENCODE_ENABLED_F = H5Z_flags(12)
H5Z_FILTER_DECODE_ENABLED_F = H5Z_flags(13)
H5Z_FILTER_ALL_F = H5Z_flags(14)
H5Z_FILTER_NBIT_F = H5Z_flags(15)
H5Z_FILTER_SCALEOFFSET_F = H5Z_flags(16)
H5Z_SO_FLOAT_DSCALE_F = H5Z_flags(17)
H5Z_SO_FLOAT_ESCALE_F = H5Z_flags(18)
H5Z_SO_INT_F = H5Z_flags(19)
H5Z_SO_INT_MINBITS_DEFAULT_F = H5Z_flags(20)
error = error + h5init1_flags_c(H5LIB_flags)
!
! H5 Library flags
!
H5_SZIP_EC_OM_F = H5LIB_flags(1)
H5_SZIP_NN_OM_F = H5LIB_flags(2)
CALL h5fget_obj_count_f(INT(H5F_OBJ_ALL_F,HID_T), H5F_OBJ_ALL_F, H5OPEN_NUM_OBJ_LOC, error)
H5OPEN_NUM_OBJ = H5OPEN_NUM_OBJ_LOC
END SUBROUTINE h5open_f
!****s* H5LIB/h5close_f
!
! NAME
! h5close_f
!
! PURPOSE
! Closes HDF5 Fortran interface.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! August 12, 1999
!
! HISTORY
! Explicit Fortran interfaces were added for
! called C functions (it is needed for Windows
! port). February 28, 2001
!
! Removed call to h5close_c since this may cause a problem for an
! application that uses HDF5 library outside HDF5 Fortran APIs.
! October 13, 2011
! Fortran90 Interface:
SUBROUTINE h5close_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5close_types_c(p_types, P_TYPES_LEN, &
f_types, F_TYPES_LEN, &
i_types, I_TYPES_LEN ) &
BIND(C,NAME='h5close_types_c')
IMPORT :: HID_T
INTEGER :: P_TYPES_LEN
INTEGER :: F_TYPES_LEN
INTEGER :: I_TYPES_LEN
INTEGER(HID_T), DIMENSION(1:P_TYPES_LEN) :: p_types
INTEGER(HID_T), DIMENSION(1:F_TYPES_LEN) :: f_types
INTEGER(HID_T), DIMENSION(1:I_TYPES_LEN) :: i_types
END FUNCTION h5close_types_c
END INTERFACE
error = h5close_types_c(predef_types, PREDEF_TYPES_LEN, &
floating_types, FLOATING_TYPES_LEN, &
integer_types, INTEGER_TYPES_LEN )
END SUBROUTINE h5close_f
!****s* H5LIB/h5get_libversion_f
!
! NAME
! h5get_libversion_f
!
! PURPOSE
! Returns the HDF5 LIbrary release number
!
! Outputs:
! majnum - major version of the library
! minum - minor version of the library
! relnum - release version of the library
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5get_libversion_f(majnum, minnum, relnum, error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: majnum, minnum, relnum, error
!*****
INTERFACE
INTEGER FUNCTION h5get_libversion_c(majnum, minnum, relnum) &
BIND(C,NAME='h5get_libversion_c')
IMPLICIT NONE
INTEGER, INTENT(OUT) :: majnum, minnum, relnum
END FUNCTION h5get_libversion_c
END INTERFACE
error = h5get_libversion_c(majnum, minnum, relnum)
END SUBROUTINE h5get_libversion_f
!****s* H5LIB/h5check_version_f
!
! NAME
! h5check_version_f
!
! PURPOSE
! Verifies that library versions are consistent.
!
! Inputs:
! majnum - major version of the library
! minum - minor version of the library
! relnum - release version of the library
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5check_version_f(majnum, minnum, relnum, error)
IMPLICIT NONE
INTEGER, INTENT(IN) :: majnum, minnum, relnum
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5check_version_c(majnum, minnum, relnum) &
BIND(C,NAME='h5check_version_c')
IMPLICIT NONE
INTEGER, INTENT(IN) :: majnum, minnum, relnum
END FUNCTION h5check_version_c
END INTERFACE
error = h5check_version_c(majnum, minnum, relnum)
END SUBROUTINE h5check_version_f
!****s* H5LIB/h5garbage_collect_f
!
! NAME
! h5garbage_collect_f
!
! PURPOSE
! Garbage collects on all free-lists of all types.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5garbage_collect_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5garbage_collect_c() &
BIND(C,NAME='h5garbage_collect_c')
END FUNCTION h5garbage_collect_c
END INTERFACE
error = h5garbage_collect_c()
END SUBROUTINE h5garbage_collect_f
!****s* H5LIB/h5dont_atexit_f
!
! NAME
! h5dont_atexit_f
!
! PURPOSE
! Instructs library not to install atexit cleanup routine.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5dont_atexit_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5dont_atexit_c() &
BIND(C,NAME='h5dont_atexit_c')
END FUNCTION h5dont_atexit_c
END INTERFACE
error = h5dont_atexit_c()
END SUBROUTINE h5dont_atexit_f
!****f* H5LIB/h5kind_to_type
!
! NAME
! h5kind_to_type
!
! PURPOSE
! Converts the KIND to the correct HDF type
!
! Inputs:
! kind - Fortran KIND parameter
! flag - Whether KIND is of type INTEGER or REAL:
! H5_INTEGER_KIND - integer
! H5_REAL_KIND - real
! Outputs:
! h5_type - Returns the type
!
! AUTHOR
! M. Scot Breitenfeld
! August 25, 2008
!
! Fortran90 Interface:
INTEGER(HID_T) FUNCTION h5kind_to_type(ikind, flag) RESULT(h5_type)
USE ISO_C_BINDING
IMPLICIT NONE
INTEGER, INTENT(IN) :: ikind
INTEGER, INTENT(IN) :: flag
INTEGER :: i
!*****
!#if H5_HAVE_Fortran_INTEGER_SIZEOF_16!=0
! ! (1) The array index assumes INTEGER*16 the last integer in the series, and
! ! (2) it should map to INTEGER*16 on most modern processors
! H5T_NATIVE_INTEGER_KIND(H5_FORTRAN_NUM_INTEGER_KINDS)=SELECTED_INT_KIND(36)
!#endif
h5_type = -1
IF(flag.EQ.H5_INTEGER_KIND)THEN
do_kind: DO i = 1, H5_FORTRAN_NUM_INTEGER_KINDS
IF(ikind.EQ.Fortran_INTEGER_AVAIL_KINDS(i))THEN
h5_type = H5T_NATIVE_INTEGER_KIND(i)
EXIT do_kind
ENDIF
END DO do_kind
ELSE IF(flag.EQ.H5_REAL_KIND)THEN
IF(ikind.EQ.KIND(1.0_C_FLOAT))THEN
h5_type = H5T_NATIVE_REAL_C_FLOAT
ELSE IF(ikind.EQ.KIND(1.0_C_DOUBLE))THEN
h5_type = H5T_NATIVE_REAL_C_DOUBLE
#if H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE!=0
ELSE IF(ikind.EQ.KIND(1.0_C_LONG_DOUBLE))THEN
h5_type = H5T_NATIVE_REAL_C_LONG_DOUBLE
#endif
#if H5_PAC_FC_MAX_REAL_PRECISION > 28
#if H5_HAVE_FLOAT128 == 1
ELSE
h5_type = H5T_NATIVE_FLOAT_128
#endif
#endif
ENDIF
ENDIF
END FUNCTION h5kind_to_type
!****f* H5LIB_PROVISIONAL/h5offsetof
!
! NAME
! h5offsetof
!
! PURPOSE
! Computes the offset in memory
!
! Inputs:
! start - starting pointer address
! end - ending pointer address
!
! Outputs:
! offset - offset of a member within the derived type
!
! AUTHOR
! M. Scot Breitenfeld
! Augest 25, 2008
!
! ACKNOWLEDGEMENTS
! Joe Krahn
!
! Fortran2003 Interface:
FUNCTION h5offsetof(start,end) RESULT(offset)
IMPLICIT NONE
INTEGER(SIZE_T) :: offset
TYPE(C_PTR), VALUE, INTENT(IN) :: start, end
!*****
INTEGER(C_INTPTR_T) :: int_address_start, int_address_end
int_address_start = TRANSFER(start, int_address_start)
int_address_end = TRANSFER(end , int_address_end )
offset = int_address_end - int_address_start
END FUNCTION h5offsetof
!****f* H5LIB_PROVISIONAL/h5gmtime
!
! NAME
! h5gmtime
!
! PURPOSE
! Convert time_t structure (C) to Fortran DATE AND TIME storage format.
!
! Inputs:
! stdtime_t - Object of type time_t that contains a time value
!
! Outputs:
! datetime - A date/time array using Fortran conventions:
! datetime(1) = year
! datetime(2) = month
! datetime(3) = day
! datetime(4) = 0 ! time is expressed as UTC (or GMT timezone) */
! datetime(5) = hour
! datetime(6) = minute
! datetime(7) = second
! datetime(8) = millisecond -- not available, assigned - HUGE(0)
!
! AUTHOR
! M. Scot Breitenfeld
! January, 2019
!
! Fortran Interface:
FUNCTION h5gmtime(stdtime_t)
IMPLICIT NONE
INTEGER(KIND=TIME_T), INTENT(IN) :: stdtime_t
INTEGER, DIMENSION(1:8) :: h5gmtime
!*****
TYPE(C_PTR) :: cptr
INTEGER(C_INT), DIMENSION(:), POINTER :: c_time
INTERFACE
FUNCTION gmtime(stdtime_t) BIND(C, NAME='gmtime')
IMPORT :: TIME_T, C_PTR
IMPLICIT NONE
INTEGER(KIND=TIME_T) :: stdtime_t
TYPE(C_PTR) :: gmtime
END FUNCTION gmtime
END INTERFACE
cptr = gmtime(stdtime_t)
CALL C_F_POINTER(cptr, c_time, [9])
h5gmtime(1) = INT(c_time(6)+1900) ! year starts at 1900
h5gmtime(2) = INT(c_time(5)+1) ! month starts at 0 in C
h5gmtime(3) = INT(c_time(4)) ! day
h5gmtime(4) = 0 ! time is expressed as UTC (or GMT timezone)
h5gmtime(5) = INT(c_time(3)) ! hour
h5gmtime(6) = INT(c_time(2)) ! minute
h5gmtime(7) = INT(c_time(1)) ! second
h5gmtime(8) = -32767 ! millisecond is not available, assign it -HUGE(0)
END FUNCTION h5gmtime
END MODULE H5LIB
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