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|
!****h* ROBODoc/H5LIB
!
! NAME
! MODULE H5LIB
!
! PURPOSE
! This module provides fortran specific helper functions for the HDF library
!
! COPYRIGHT
! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
! Copyright by The HDF Group. *
! Copyright by the Board of Trustees of the University of Illinois. *
! All rights reserved. *
! *
! This file is part of HDF5. The full HDF5 copyright notice, including *
! terms governing use, modification, and redistribution, is contained in *
! the files COPYING and Copyright.html. COPYING can be found at the root *
! of the source code distribution tree; Copyright.html can be found at the *
! root level of an installed copy of the electronic HDF5 document set and *
! is linked from the top-level documents page. It can also be found at *
! http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
! access to either file, you may request a copy from help@hdfgroup.org. *
! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
!
! NOTES
! _____ __ __ _____ ____ _____ _______ _ _ _______
! |_ _| \/ | __ \ / __ \| __ \__ __|/\ | \ | |__ __|
! **** | | | \ / | |__) | | | | |__) | | | / \ | \| | | | ****
! **** | | | |\/| | ___/| | | | _ / | | / /\ \ | . ` | | | ****
! **** _| |_| | | | | | |__| | | \ \ | |/ ____ \| |\ | | | ****
! |_____|_| |_|_| \____/|_| \_\ |_/_/ \_\_| \_| |_|
!
! If you add a new function you must add the function name to the
! Windows dll file 'hdf5_fortrandll.def.in' in the fortran/src directory.
! This is needed for Windows based operating systems.
!
!*****
#include <H5config_f.inc>
MODULE H5LIB
USE, INTRINSIC :: ISO_C_BINDING, ONLY : c_ptr, C_INTPTR_T
USE H5GLOBAL
IMPLICIT NONE
CONTAINS
!****s* H5LIB/h5open_f
!
! NAME
! h5open_f
!
! PURPOSE
! Initializes HDF5 Fortran interface.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! August 12, 1999
!
! HISTORY
! Explicit Fortran interfaces were added for
! called C functions (it is needed for Windows
! port). February 28, 2001
!
! Removed call to h5open_c since this may cause a problem for an
! application that uses HDF5 library outside HDF5 Fortran APIs.
! October 13, 2011
! Fortran90 Interface:
SUBROUTINE h5open_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTEGER :: error_1, error_2, error_3
INTERFACE
INTEGER FUNCTION h5init_types_c(p_types, f_types, i_types) &
BIND(C,NAME='h5init_types_c')
IMPORT :: HID_T
IMPORT :: PREDEF_TYPES_LEN, FLOATING_TYPES_LEN, INTEGER_TYPES_LEN
IMPLICIT NONE
INTEGER(HID_T), DIMENSION(PREDEF_TYPES_LEN) :: p_types
INTEGER(HID_T), DIMENSION(FLOATING_TYPES_LEN) :: f_types
INTEGER(HID_T), DIMENSION(INTEGER_TYPES_LEN) :: i_types
END FUNCTION h5init_types_c
END INTERFACE
INTERFACE
INTEGER FUNCTION h5init_flags_c(i_H5D_flags, &
i_H5D_size_flags,&
i_H5E_flags, &
i_H5E_hid_flags, &
i_H5F_flags, &
i_H5FD_flags, &
i_H5FD_hid_flags, &
i_H5G_flags, &
i_H5I_flags, &
i_H5L_flags, &
i_H5O_flags, &
i_H5P_flags, &
i_H5P_flags_int, &
i_H5R_flags, &
i_H5S_flags, &
i_H5S_hsize_flags, &
i_H5T_flags, &
i_H5Z_flags, &
i_H5generic_flags, &
i_H5generic_haddr_flags) &
BIND(C,NAME='h5init_flags_c')
IMPORT :: HID_T, SIZE_T, HSIZE_T, HADDR_T
IMPORT :: H5D_FLAGS_LEN, H5D_SIZE_FLAGS_LEN, &
H5E_FLAGS_LEN, H5E_HID_FLAGS_LEN, &
H5F_FLAGS_LEN, H5G_FLAGS_LEN, H5FD_FLAGS_LEN, &
H5FD_HID_FLAGS_LEN, H5I_FLAGS_LEN, H5L_FLAGS_LEN, &
H5O_FLAGS_LEN, H5P_FLAGS_LEN, H5P_FLAGS_INT_LEN, &
H5R_FLAGS_LEN, H5S_FLAGS_LEN, H5S_HSIZE_FLAGS_LEN, &
H5T_FLAGS_LEN, H5Z_FLAGS_LEN, H5generic_FLAGS_LEN, H5generic_haddr_FLAGS_LEN
IMPLICIT NONE
INTEGER i_H5D_flags(H5D_FLAGS_LEN)
INTEGER(SIZE_T) i_H5D_size_flags(H5D_SIZE_FLAGS_LEN)
INTEGER i_H5E_flags(H5E_FLAGS_LEN)
INTEGER(HID_T) i_H5E_hid_flags(H5E_HID_FLAGS_LEN)
INTEGER i_H5F_flags(H5F_FLAGS_LEN)
INTEGER i_H5G_flags(H5G_FLAGS_LEN)
INTEGER i_H5FD_flags(H5FD_FLAGS_LEN)
INTEGER(HID_T) i_H5FD_hid_flags(H5FD_HID_FLAGS_LEN)
INTEGER i_H5I_flags(H5I_FLAGS_LEN)
INTEGER i_H5L_flags(H5L_FLAGS_LEN)
INTEGER i_H5O_flags(H5O_FLAGS_LEN)
INTEGER(HID_T) i_H5P_flags(H5P_FLAGS_LEN)
INTEGER i_H5P_flags_int(H5P_FLAGS_INT_LEN)
INTEGER i_H5R_flags(H5R_FLAGS_LEN)
INTEGER i_H5S_flags(H5S_FLAGS_LEN)
INTEGER(HSIZE_T) i_H5S_hsize_flags(H5S_HSIZE_FLAGS_LEN)
INTEGER i_H5T_flags(H5T_FLAGS_LEN)
INTEGER i_H5Z_flags(H5Z_FLAGS_LEN)
INTEGER i_H5generic_flags(H5generic_FLAGS_LEN)
INTEGER(HADDR_T) i_H5generic_haddr_flags(H5generic_haddr_FLAGS_LEN)
END FUNCTION h5init_flags_c
END INTERFACE
INTERFACE
INTEGER FUNCTION h5init1_flags_c( i_H5LIB_flags ) &
BIND(C,NAME='h5init1_flags_c')
IMPORT :: H5LIB_FLAGS_LEN
IMPLICIT NONE
INTEGER i_H5LIB_flags(H5LIB_FLAGS_LEN)
END FUNCTION h5init1_flags_c
END INTERFACE
error_1 = h5init_types_c(predef_types, floating_types, integer_types)
error_2 = h5init_flags_c(H5D_flags, &
H5D_size_flags, &
H5E_flags, &
H5E_hid_flags, &
H5F_flags, &
H5FD_flags, &
H5FD_hid_flags, &
H5G_flags, &
H5I_flags, &
H5L_flags, &
H5O_flags, &
H5P_flags, &
H5P_flags_int, &
H5R_flags, &
H5S_flags, &
H5S_hsize_flags, &
H5T_flags, &
H5Z_flags, &
H5generic_flags,&
H5generic_haddr_flags)
error_3 = h5init1_flags_c(H5LIB_flags )
error = error_1 + error_2 + error_3
END SUBROUTINE h5open_f
!****s* H5LIB/h5close_f
!
! NAME
! h5close_f
!
! PURPOSE
! Closes HDF5 Fortran interface.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! August 12, 1999
!
! HISTORY
! Explicit Fortran interfaces were added for
! called C functions (it is needed for Windows
! port). February 28, 2001
!
! Removed call to h5close_c since this may cause a problem for an
! application that uses HDF5 library outside HDF5 Fortran APIs.
! October 13, 2011
! Fortran90 Interface:
SUBROUTINE h5close_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTEGER :: error_1
INTERFACE
INTEGER FUNCTION h5close_types_c(p_types, P_TYPES_LEN, &
f_types, F_TYPES_LEN, &
i_types, I_TYPES_LEN ) &
BIND(C,NAME='h5close_types_c')
IMPORT :: HID_T
INTEGER P_TYPES_LEN
INTEGER F_TYPES_LEN
INTEGER I_TYPES_LEN
INTEGER(HID_T), DIMENSION(P_TYPES_LEN) :: p_types
INTEGER(HID_T), DIMENSION(F_TYPES_LEN) :: f_types
INTEGER(HID_T), DIMENSION(I_TYPES_LEN) :: i_types
END FUNCTION h5close_types_c
END INTERFACE
error_1 = h5close_types_c(predef_types, PREDEF_TYPES_LEN, &
floating_types, FLOATING_TYPES_LEN, &
integer_types, INTEGER_TYPES_LEN )
error = error_1
END SUBROUTINE h5close_f
!****s* H5LIB/h5get_libversion_f
!
! NAME
! h5get_libversion_f
!
! PURPOSE
! Returns the HDF5 LIbrary release number
!
! Outputs:
! majnum - major version of the library
! minum - minor version of the library
! relnum - release version of the library
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5get_libversion_f(majnum, minnum, relnum, error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: majnum, minnum, relnum, error
!*****
INTERFACE
INTEGER FUNCTION h5get_libversion_c(majnum, minnum, relnum) &
BIND(C,NAME='h5get_libversion_c')
IMPLICIT NONE
INTEGER, INTENT(OUT) :: majnum, minnum, relnum
END FUNCTION h5get_libversion_c
END INTERFACE
error = h5get_libversion_c(majnum, minnum, relnum)
END SUBROUTINE h5get_libversion_f
!****s* H5LIB/h5check_version_f
!
! NAME
! h5check_version_f
!
! PURPOSE
! Verifies that library versions are consistent.
!
! Inputs:
! majnum - major version of the library
! minum - minor version of the library
! relnum - release version of the library
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5check_version_f(majnum, minnum, relnum, error)
IMPLICIT NONE
INTEGER, INTENT(IN) :: majnum, minnum, relnum
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5check_version_c(majnum, minnum, relnum) &
BIND(C,NAME='h5check_version_c')
IMPLICIT NONE
INTEGER, INTENT(IN) :: majnum, minnum, relnum
END FUNCTION h5check_version_c
END INTERFACE
error = h5check_version_c(majnum, minnum, relnum)
END SUBROUTINE h5check_version_f
!****s* H5LIB/h5garbage_collect_f
!
! NAME
! h5garbage_collect_f
!
! PURPOSE
! Garbage collects on all free-lists of all types.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5garbage_collect_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5garbage_collect_c() &
BIND(C,NAME='h5garbage_collect_c')
END FUNCTION h5garbage_collect_c
END INTERFACE
error = h5garbage_collect_c()
END SUBROUTINE h5garbage_collect_f
!****s* H5LIB/h5dont_atexit_f
!
! NAME
! h5dont_atexit_f
!
! PURPOSE
! Instructs library not to install atexit cleanup routine.
!
! Outputs:
! error - Returns 0 if successful and -1 if fails
!
! AUTHOR
! Elena Pourmal
! September 24, 2002
!
! Fortran90 Interface:
SUBROUTINE h5dont_atexit_f(error)
IMPLICIT NONE
INTEGER, INTENT(OUT) :: error
!*****
INTERFACE
INTEGER FUNCTION h5dont_atexit_c() &
BIND(C,NAME='h5dont_atexit_c')
END FUNCTION h5dont_atexit_c
END INTERFACE
error = h5dont_atexit_c()
END SUBROUTINE h5dont_atexit_f
!****f* H5LIB/h5kind_to_type
!
! NAME
! h5kind_to_type
!
! PURPOSE
! Converts the KIND to the correct HDF type
!
! Inputs:
! kind - Fortran KIND parameter
! flag - Whether KIND is of type INTEGER or REAL:
! H5_INTEGER_KIND - integer
! H5_REAL_KIND - real
! Outputs:
! h5_type - Returns the type
!
! AUTHOR
! M. Scot Breitenfeld
! August 25, 2008
!
! Fortran90 Interface:
INTEGER(HID_T) FUNCTION h5kind_to_type(ikind, flag) RESULT(h5_type)
USE ISO_C_BINDING
IMPLICIT NONE
INTEGER, INTENT(IN) :: ikind
INTEGER, INTENT(IN) :: flag
INTEGER :: i
!*****
!#if H5_HAVE_Fortran_INTEGER_SIZEOF_16!=0
! ! (1) The array index assumes INTEGER*16 the last integer in the series, and
! ! (2) it should map to INTEGER*16 on most modern processors
! H5T_NATIVE_INTEGER_KIND(H5_FORTRAN_NUM_INTEGER_KINDS)=SELECTED_INT_KIND(36)
!#endif
h5_type = -1
IF(flag.EQ.H5_INTEGER_KIND)THEN
do_kind: DO i = 1, H5_FORTRAN_NUM_INTEGER_KINDS
IF(ikind.EQ.Fortran_INTEGER_AVAIL_KINDS(i))THEN
!PRINT*,ikind, Fortran_INTEGER_AVAIL_KINDS(i),H5T_NATIVE_INTEGER_KIND(i)
h5_type = H5T_NATIVE_INTEGER_KIND(i)
EXIT do_kind
ENDIF
END DO do_kind
ELSE IF(flag.EQ.H5_REAL_KIND)THEN
IF(ikind.EQ.KIND(1.0_C_FLOAT))THEN
h5_type = H5T_NATIVE_REAL_C_FLOAT
ELSE IF(ikind.EQ.KIND(1.0_C_DOUBLE))THEN
h5_type = H5T_NATIVE_REAL_C_DOUBLE
#if H5_FORTRAN_C_LONG_DOUBLE_IS_UNIQUE!=0
ELSE IF(ikind.EQ.KIND(1.0_C_LONG_DOUBLE))THEN
h5_type = H5T_NATIVE_REAL_C_LONG_DOUBLE
#endif
#if H5_PAC_FC_MAX_REAL_PRECISION > 28
#if H5_HAVE_FLOAT128 == 1
ELSE
h5_type = H5T_NATIVE_FLOAT_128
#endif
#endif
ENDIF
ENDIF
END FUNCTION h5kind_to_type
!****f* H5LIB_PROVISIONAL/h5offsetof
!
! NAME
! h5offsetof
!
! PURPOSE
! Computes the offset in memory
!
! Inputs:
! start - starting pointer address
! end - ending pointer address
!
! Outputs:
! offset - offset of a member within the derived type
!
! AUTHOR
! M. Scot Breitenfeld
! Augest 25, 2008
!
! ACKNOWLEDGEMENTS
! Joe Krahn
!
! Fortran2003 Interface:
FUNCTION h5offsetof(start,end) RESULT(offset)
IMPLICIT NONE
INTEGER(SIZE_T) :: offset
TYPE(C_PTR), VALUE, INTENT(IN) :: start, end
!*****
INTEGER(C_INTPTR_T) :: int_address_start, int_address_end
int_address_start = TRANSFER(start, int_address_start)
int_address_end = TRANSFER(end , int_address_end )
offset = int_address_end - int_address_start
END FUNCTION h5offsetof
END MODULE H5LIB
|