1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include "hdf5.h"
#include "hdf5_hl.h"
#include <stdlib.h>
/*-------------------------------------------------------------------------
* Table API example
*
* H5TBwrite_fields_index
*
*-------------------------------------------------------------------------
*/
#define NFIELDS (hsize_t)5
#define NRECORDS (hsize_t)8
#define NRECORDS_ADD (hsize_t)3
#define TABLE_NAME "table"
int
main(void)
{
typedef struct Particle {
char name[16];
int lati;
int longi;
float pressure;
double temperature;
} Particle;
/* Define a subset of Particle, with latitude and longitude fields */
typedef struct Position {
int lati;
int longi;
} Position;
/* Calculate the type_size and the offsets of our struct members */
Particle dst_buf[NRECORDS];
size_t dst_size = sizeof(Particle);
size_t dst_offset[NFIELDS] = {HOFFSET(Particle, name), HOFFSET(Particle, lati), HOFFSET(Particle, longi),
HOFFSET(Particle, pressure), HOFFSET(Particle, temperature)};
size_t dst_sizes[NFIELDS] = {sizeof(dst_buf[0].name), sizeof(dst_buf[0].lati), sizeof(dst_buf[0].longi),
sizeof(dst_buf[0].pressure), sizeof(dst_buf[0].temperature)};
size_t field_offset_pos[2] = {HOFFSET(Position, lati), HOFFSET(Position, longi)};
/* Initially no data */
Particle *p_data = NULL;
/* Define field information */
const char *field_names[NFIELDS] = {"Name", "Latitude", "Longitude", "Pressure", "Temperature"};
hid_t field_type[NFIELDS];
hid_t string_type;
hid_t file_id;
hsize_t chunk_size = 10;
Particle fill_data[1] = {{"no data", -1, -1, -99.0F, -99.0}}; /* Fill value particle */
int compress = 0;
hsize_t nfields;
hsize_t start; /* Record to start reading/writing */
hsize_t nrecords; /* Number of records to read/write */
int i;
/* Define new values for the field "Pressure" */
float pressure_in[NRECORDS_ADD] = {0.0F, 1.0F, 2.0F};
int field_index_pre[1] = {3};
int field_index_pos[2] = {1, 2};
/* Define new values for the fields "Latitude,Longitude" */
Position position_in[NRECORDS_ADD] = {{0, 0}, {10, 10}, {20, 20}};
size_t field_sizes_pos[2] = {sizeof(position_in[0].longi), sizeof(position_in[0].lati)};
size_t field_sizes_pre[1] = {sizeof(float)};
/* Initialize the field field_type */
string_type = H5Tcopy(H5T_C_S1);
H5Tset_size(string_type, 16);
field_type[0] = string_type;
field_type[1] = H5T_NATIVE_INT;
field_type[2] = H5T_NATIVE_INT;
field_type[3] = H5T_NATIVE_FLOAT;
field_type[4] = H5T_NATIVE_DOUBLE;
/* Create a new file using default properties. */
file_id = H5Fcreate("ex_table_05.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
/* Make the table */
H5TBmake_table("Table Title", file_id, TABLE_NAME, NFIELDS, NRECORDS, dst_size, field_names, dst_offset,
field_type, chunk_size, fill_data, compress, p_data);
/* Write the pressure field starting at record 2 */
nfields = 1;
start = 2;
nrecords = NRECORDS_ADD;
H5TBwrite_fields_index(file_id, TABLE_NAME, nfields, field_index_pre, start, nrecords, sizeof(float), 0,
field_sizes_pre, pressure_in);
/* Write the new longitude and latitude information starting at record 2 */
nfields = 2;
start = 2;
nrecords = NRECORDS_ADD;
H5TBwrite_fields_index(file_id, TABLE_NAME, nfields, field_index_pos, start, nrecords, sizeof(Position),
field_offset_pos, field_sizes_pos, position_in);
/* read the table */
H5TBread_table(file_id, TABLE_NAME, dst_size, dst_offset, dst_sizes, dst_buf);
/* print it by rows */
for (i = 0; i < NRECORDS; i++) {
printf("%-5s %-5d %-5d %-5f %-5f", dst_buf[i].name, dst_buf[i].lati, dst_buf[i].longi,
dst_buf[i].pressure, dst_buf[i].temperature);
printf("\n");
}
/* close type */
H5Tclose(string_type);
/* close the file */
H5Fclose(file_id);
return 0;
}
|