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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include <assert.h>
#include <stdlib.h>
#include <string.h>
#include "H5DSprivate.h"
#include "H5LTprivate.h"
#include "H5IMprivate.h"
#include "H5TBprivate.h"
/*-------------------------------------------------------------------------
* Function: H5DSset_scale
*
* Purpose: The dataset DSID is converted to a Dimension Scale dataset.
* Creates the CLASS attribute, set to the value "DIMENSION_SCALE"
* and an empty REFERENCE_LIST attribute.
* If DIMNAME is specified, then an attribute called NAME is created,
* with the value DIMNAME.
*
* Return: Success: SUCCEED, Failure: FAIL
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 04, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5DSset_scale(hid_t dsid,
const char *dimname)
{
int has_dimlist;
H5I_type_t it;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(dsid)) < 0)
return FAIL;
if (H5I_DATASET!=it)
return FAIL;
/*-------------------------------------------------------------------------
* check if the dataset is a dataset wich has references to dimension scales
*-------------------------------------------------------------------------
*/
/* try to find the attribute "DIMENSION_LIST" */
if ((has_dimlist = H5LT_find_attribute(dsid,DIMENSION_LIST)) < 0)
return FAIL;
if (has_dimlist == 1)
return FAIL;
/*-------------------------------------------------------------------------
* write the standard attributes for a Dimension Scale dataset
*-------------------------------------------------------------------------
*/
if (H5LT_set_attribute_string(dsid,"CLASS",DIMENSION_SCALE_CLASS) < 0)
return FAIL;
if (dimname!=NULL)
{
if (H5LT_set_attribute_string(dsid,"NAME",dimname) < 0)
return FAIL;
}
return SUCCEED;
}
/*-------------------------------------------------------------------------
* Function: H5DSattach_scale
*
* Purpose: Define Dimension Scale DSID to be associated with dimension IDX
* of Dataset DID. Entries are created in the DIMENSION_LIST and
* REFERENCE_LIST attributes.
*
* Return:
* Success: SUCCEED
* Failure: FAIL
*
* Fails if: Bad arguments
* If DSID is not a Dimension Scale
* If DID is a Dimension Scale (A Dimension Scale cannot have scales)
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: December 20, 2004
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5DSattach_scale(hid_t did,
hid_t dsid,
unsigned int idx)
{
int has_dimlist;
int has_reflist;
int is_ds;
hssize_t nelmts;
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
int rank; /* rank of dataset */
hsize_t *dims; /* dimension of the "REFERENCE_LIST" array */
ds_list_t dsl; /* attribute data in the DS pointing to the dataset */
ds_list_t *dsbuf; /* array of attribute data in the DS pointing to the dataset */
hobj_ref_t ref_to_ds; /* reference to the DS */
hobj_ref_t ref_j; /* iterator reference */
hvl_t *buf; /* VL buffer to store in the attribute */
hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */
H5O_info_t oi1, oi2;
H5I_type_t it1, it2;
int i, len;
int found_ds=0;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* the dataset cannot be a DS dataset */
if ((H5DSis_scale(did))==1)
return FAIL;
/* get info for the dataset in the parameter list */
if(H5Oget_info(did, &oi1) < 0)
return FAIL;
/* get info for the scale in the parameter list */
if(H5Oget_info(dsid, &oi2) < 0)
return FAIL;
/* same object, not valid */
if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr)
return FAIL;
/* get ID type */
if ((it1 = H5Iget_type(did)) < 0)
return FAIL;
if ((it2 = H5Iget_type(dsid)) < 0)
return FAIL;
if (H5I_DATASET!=it1 || H5I_DATASET!=it2)
return FAIL;
/* the DS dataset cannot have dimension scales */
if (H5LT_find_attribute(dsid,DIMENSION_LIST)==1)
return FAIL;
/* check if the dataset is a "reserved" dataset (image, table) */
if (H5DS_is_reserved(did)==1)
return FAIL;
/*-------------------------------------------------------------------------
* The dataset may or may not have the associated DS attribute
* First we try to open to see if it is already there; if not, it is created.
* If it exists, the array of references is extended to hold the reference
* to the new DS
*-------------------------------------------------------------------------
*/
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank=H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* scalar rank */
if (rank==0)
rank=1;
/* close dataset space */
if (H5Sclose(sid) < 0)
return FAIL;
/* parameter range checking */
if (idx>(unsigned)rank-1)
return FAIL;
/*-------------------------------------------------------------------------
* two references are created: one to the DS, saved in "DIMENSION_LIST"
* and one to the dataset, saved in "REFERENCE_LIST"
*-------------------------------------------------------------------------
*/
/* create a reference for the >>DS<< dataset */
if (H5Rcreate(&ref_to_ds,dsid,".",H5R_OBJECT,-1) < 0)
return FAIL;
/* create a reference for the >>data<< dataset */
if (H5Rcreate(&dsl.ref,did,".",H5R_OBJECT,-1) < 0)
return FAIL;
/* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */
if ((has_dimlist = H5LT_find_attribute(did,DIMENSION_LIST)) < 0)
return FAIL;
/*-------------------------------------------------------------------------
* it does not exist. we create the attribute and its reference data
*-------------------------------------------------------------------------
*/
if (has_dimlist == 0)
{
/* create one entry array */
dims = (hsize_t*) malloc (1 * sizeof (hsize_t));
if(dims == NULL)
return FAIL;
dims[0] = rank;
/* space for the attribute */
if((sid = H5Screate_simple(1, dims, NULL)) < 0)
return FAIL;
/* create the type for the attribute "DIMENSION_LIST" */
if((tid = H5Tvlen_create(H5T_STD_REF_OBJ)) < 0)
goto out;
/* create the attribute */
if((aid = H5Acreate2(did, DIMENSION_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto out;
/* allocate and initialize the VL */
buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
if(buf == NULL)
goto out;
for(i = 0; i < rank; i++) {
buf[i].len = 0;
buf[i].p = NULL;
}
/* store the REF information in the index of the dataset that has the DS */
buf[idx].len = 1;
buf[idx].p = malloc( 1 * sizeof(hobj_ref_t));
((hobj_ref_t *)buf[idx].p)[0] = ref_to_ds;
/* write the attribute with the reference */
if (H5Awrite(aid,tid,buf) < 0)
goto out;
/* close */
if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (dims)
free(dims);
if (buf)
free(buf);
}
/*-------------------------------------------------------------------------
* the attribute already exists, open it, extend the buffer,
* and insert the new reference
*-------------------------------------------------------------------------
*/
else if ( has_dimlist == 1 )
{
if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if((sid = H5Aget_space(aid)) < 0)
goto out;
/* allocate and initialize the VL */
buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
if(buf == NULL)
goto out;
/* read */
if(H5Aread(aid, tid, buf) < 0)
goto out;
/* check to avoid inserting duplicates. it is not FAIL, just do nothing */
/* iterate all the REFs in this dimension IDX */
for (i=0; i<(int)buf[idx].len; i++)
{
/* get the reference */
ref_j = ((hobj_ref_t *)buf[idx].p)[i];
/* get the scale id for this REF */
if ((dsid_j = H5Rdereference(did,H5R_OBJECT,&ref_j)) < 0)
goto out;
/* get info for DS in the parameter list */
if(H5Oget_info(dsid, &oi1) < 0)
goto out;
/* get info for this DS */
if(H5Oget_info(dsid_j, &oi2) < 0)
goto out;
/* same object, so this DS scale is already in this DIM IDX */
if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr)
found_ds = 1;
/* close the dereferenced dataset */
if (H5Dclose(dsid_j) < 0)
goto out;
}
if (found_ds==0)
{
/* we are adding one more DS to this dimension */
if ( buf[idx].len > 0 )
{
buf[idx].len++;
len = buf[idx].len;
buf[idx].p = realloc( buf[idx].p, len * sizeof(hobj_ref_t));
((hobj_ref_t *)buf[idx].p)[ len-1 ] = ref_to_ds;
}
else
{
/* store the REF information in the index of the dataset that has the DS */
buf[idx].len = 1;
buf[idx].p = malloc( 1 * sizeof(hobj_ref_t));
((hobj_ref_t *)buf[idx].p)[0] = ref_to_ds;
}
}
/* write the attribute with the new references */
if (H5Awrite(aid,tid,buf) < 0)
goto out;
/* close */
if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free(buf);
} /* has_dimlist */
/*-------------------------------------------------------------------------
* save DS info on the >>DS<< dataset
*-------------------------------------------------------------------------
*/
/* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */
if ((has_reflist = H5LT_find_attribute(dsid,REFERENCE_LIST)) < 0)
goto out;
/*-------------------------------------------------------------------------
* it does not exist. we create the attribute and its reference data
*-------------------------------------------------------------------------
*/
if (has_reflist == 0)
{
/* create one entry array */
dims = (hsize_t*) malloc (1 * sizeof (hsize_t));
if (dims == NULL)
goto out;
dims[0] = 1;
/* space for the attribute */
if ((sid = H5Screate_simple(1,dims,NULL)) < 0)
goto out;
/* create the compound datatype for the attribute "REFERENCE_LIST" */
if((tid = H5Tcreate(H5T_COMPOUND, sizeof(ds_list_t))) < 0)
goto out;
/* insert reference field */
if(H5Tinsert(tid, "dataset", HOFFSET(ds_list_t,ref), H5T_STD_REF_OBJ) < 0)
goto out;
/* insert dimension idx of the dataset field */
if(H5Tinsert(tid, "dimension", HOFFSET(ds_list_t, dim_idx), H5T_NATIVE_INT) < 0)
goto out;
/* create the attribute */
if((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto out;
/* store the IDX information */
dsl.dim_idx = idx;
/* write the attribute with the reference */
if(H5Awrite(aid, tid, &dsl) < 0)
goto out;
/* close */
if(H5Sclose(sid) < 0)
goto out;
if(H5Tclose(tid) < 0)
goto out;
if(H5Aclose(aid) < 0)
goto out;
if(dims)
free(dims);
}
/*-------------------------------------------------------------------------
* the "REFERENCE_LIST" array already exists, open it and extend it
*-------------------------------------------------------------------------
*/
else if(has_reflist == 1)
{
if((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
/* get and save the old reference(s) */
if((sid = H5Aget_space(aid)) < 0)
goto out;
if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0)
goto out;
nelmts++;
dsbuf = malloc((size_t)nelmts * sizeof(ds_list_t));
if (dsbuf == NULL)
goto out;
if (H5Aread(aid,tid,dsbuf) < 0)
goto out;
/* close */
if (H5Sclose(sid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
/*-------------------------------------------------------------------------
* create a new attribute
*-------------------------------------------------------------------------
*/
/* the attribute must be deleted, in order to the new one can reflect the changes*/
if(H5Adelete(dsid, REFERENCE_LIST) < 0)
goto out;
/* store the IDX information (index of the dataset that has the DS) */
dsl.dim_idx = idx;
dsbuf[nelmts-1] = dsl;
/* create a new data space for the new references array */
dims = (hsize_t *)malloc((size_t)nelmts * sizeof(hsize_t));
if(dims == NULL)
goto out;
dims[0] = nelmts;
if((sid = H5Screate_simple(1, dims, NULL)) < 0)
goto out;
if(dims)
free(dims);
/* create the attribute again with the changes of space */
if((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto out;
/* write the attribute with the new references */
if(H5Awrite(aid, tid, dsbuf) < 0)
goto out;
/* close */
if(H5Sclose(sid) < 0)
goto out;
if(H5Tclose(tid) < 0)
goto out;
if(H5Aclose(aid) < 0)
goto out;
if (dsbuf)
free(dsbuf);
} /* has_reflist */
/*-------------------------------------------------------------------------
* write the standard attributes for a Dimension Scale dataset
*-------------------------------------------------------------------------
*/
if ((is_ds=H5DSis_scale(dsid)) < 0)
return FAIL;
if (is_ds == 0 )
{
if (H5LT_set_attribute_string(dsid,"CLASS",DIMENSION_SCALE_CLASS) < 0)
return FAIL;
}
return SUCCEED;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
} H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSdetach_scale
*
* Purpose: If possible, deletes association of Dimension Scale DSID with
* dimension IDX of Dataset DID. This deletes the entries in the
* DIMENSION_LIST and REFERENCE_LIST attributes.
*
* Return:
* Success: SUCCEED
* Failure: FAIL
*
* Fails if: Bad arguments
* The dataset DID or DSID do not exist.
* The DSID is not a Dimension Scale
* DSID is not attached to DID.
* Note that a scale may be associated with more than dimension of the same dataset.
* If so, the detach operation only deletes one of the associations, for DID.
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: December 20, 2004
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5DSdetach_scale(hid_t did,
hid_t dsid,
unsigned int idx)
{
int has_dimlist;
int has_reflist;
hssize_t nelmts;
hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */
hid_t did_i; /* dataset ID in REFERENCE_LIST */
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
int rank; /* rank of dataset */
ds_list_t *dsbuf = NULL; /* array of attribute data in the DS pointing to the dataset */
ds_list_t *dsbufn = NULL; /* array of attribute data in the DS pointing to the dataset */
hsize_t *dims = NULL; /* dimension of the "REFERENCE_LIST" array */
hobj_ref_t ref; /* reference to the DS */
hvl_t *buf = NULL; /* VL buffer to store in the attribute */
unsigned i, j, jj;
H5O_info_t oi1, oi2, oi3, oi4;
int found_dset = 0, found_ds = 0;
H5I_type_t it1, it2;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* the dataset cannot be a DS dataset */
if ((H5DSis_scale(did))==1)
return FAIL;
/* get info for the dataset in the parameter list */
if(H5Oget_info(did, &oi1) < 0)
return FAIL;
/* get info for the scale in the parameter list */
if(H5Oget_info(dsid, &oi2) < 0)
return FAIL;
/* same object, not valid */
if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr)
return FAIL;
/* get ID type */
if ((it1 = H5Iget_type(did)) < 0)
return FAIL;
if ((it2 = H5Iget_type(dsid)) < 0)
return FAIL;
if (H5I_DATASET!=it1 || H5I_DATASET!=it2)
return FAIL;
/*-------------------------------------------------------------------------
* Find "DIMENSION_LIST"
*-------------------------------------------------------------------------
*/
/* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */
if ((has_dimlist = H5LT_find_attribute(did,DIMENSION_LIST)) < 0)
return FAIL;
if (has_dimlist == 0)
return FAIL;
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank=H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* close dataset space */
if (H5Sclose(sid) < 0)
return FAIL;
/*-------------------------------------------------------------------------
* find "REFERENCE_LIST"
*-------------------------------------------------------------------------
*/
/* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */
if((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0)
return FAIL;
if(has_reflist == 0)
return FAIL;
/*-------------------------------------------------------------------------
* open "DIMENSION_LIST", and delete the reference
*-------------------------------------------------------------------------
*/
if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0)
return FAIL;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if((sid = H5Aget_space(aid)) < 0)
goto out;
/* allocate and initialize the VL */
buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
if(buf == NULL)
goto out;
/* read */
if (H5Aread(aid,tid,buf) < 0)
goto out;
/* reset */
if ( buf[idx].len > 0 )
{
for (j=0; j<buf[idx].len; j++)
{
/* get the reference */
ref = ((hobj_ref_t *)buf[idx].p)[j];
/* get the DS id */
if ((dsid_j = H5Rdereference(did,H5R_OBJECT,&ref)) < 0)
goto out;
/* get info for DS in the parameter list */
if(H5Oget_info(dsid, &oi1) < 0)
goto out;
/* get info for this DS */
if(H5Oget_info(dsid_j, &oi2) < 0)
goto out;
/* same object, reset */
if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr) {
for(jj=j; jj<buf[idx].len-1; jj++)
((hobj_ref_t *)buf[idx].p)[jj] = ((hobj_ref_t *)buf[idx].p)[jj+1];
buf[idx].len--;
found_ds = 1;
/* close the dereferenced dataset and break */
if (H5Dclose(dsid_j) < 0)
goto out;
break;
}
/* close the dereferenced dataset */
if (H5Dclose(dsid_j) < 0)
goto out;
} /* j */
} /* if */
/* write the attribute */
if (H5Awrite(aid,tid,buf) < 0)
goto out;
/* close */
if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if(H5Aclose(aid) < 0)
goto out;
if(buf)
free(buf);
/* the scale must be present */
if(found_ds == 0)
goto out;
/*-------------------------------------------------------------------------
* the "REFERENCE_LIST" array exists, update
*-------------------------------------------------------------------------
*/
if((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
/* get and save the old reference(s) */
if((sid = H5Aget_space(aid)) < 0)
goto out;
if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0)
goto out;
dsbuf = malloc((size_t)nelmts * sizeof(ds_list_t));
if(dsbuf == NULL)
goto out;
if (H5Aread(aid,tid,dsbuf) < 0)
goto out;
for(i=0; i<nelmts; i++)
{
/* get the reference to the dataset */
ref = dsbuf[i].ref;
/* get the dataset id */
if ((did_i = H5Rdereference(did,H5R_OBJECT,&ref)) < 0)
goto out;
/* get info for dataset in the parameter list */
if(H5Oget_info(did, &oi3) < 0)
goto out;
/* get info for this dataset */
if(H5Oget_info(did_i, &oi4) < 0)
goto out;
/* same object, reset. we want to detach only for this DIM */
if(oi3.fileno == oi4.fileno && oi3.addr == oi4.addr && (int)idx == dsbuf[i].dim_idx) {
for(jj=i; jj<nelmts-1; jj++)
dsbuf[jj] = dsbuf[jj+1];
nelmts--;
found_dset=1;
/* close the dereferenced dataset and break */
if (H5Dclose(did_i) < 0)
goto out;
break;
} /* if */
/* close the dereferenced dataset */
if (H5Dclose(did_i) < 0)
goto out;
} /* i */
/* close space and attribute */
if (H5Sclose(sid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
/*-------------------------------------------------------------------------
* check if we found the pointed dataset
*-------------------------------------------------------------------------
*/
/* the pointed dataset must exist */
if (found_dset == 0)
goto out;
/*-------------------------------------------------------------------------
* create a new attribute
*-------------------------------------------------------------------------
*/
/* the attribute must be deleted, in order to the new one can reflect the changes*/
if(H5Adelete(dsid, REFERENCE_LIST) < 0)
goto out;
/* don't do anything for an empty array */
if(nelmts)
{
/* create a new data space for the new references array */
dims = (hsize_t*)malloc((size_t)nelmts * sizeof (hsize_t));
if(dims == NULL)
goto out;
dims[0] = nelmts;
dsbufn = malloc((size_t)nelmts * sizeof(ds_list_t));
if(dsbufn == NULL)
goto out;
/* store the new information */
for(i = 0; i < nelmts; i++)
dsbufn[i] = dsbuf[i];
if((sid = H5Screate_simple(1, dims, NULL)) < 0)
goto out;
/* create the attribute again with the changes of space */
if((aid = H5Acreate2(dsid, REFERENCE_LIST, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto out;
/* write the new attribute with the new references */
if(H5Awrite(aid, tid, dsbufn) < 0)
goto out;
/* close space and attribute */
if(H5Sclose(sid) < 0)
goto out;
if(H5Aclose(aid) < 0)
goto out;
} /* nelmts */
/* close type */
if (H5Tclose(tid) < 0)
goto out;
if (dsbuf) {
free(dsbuf);
dsbuf=NULL;
}
if (dsbufn) {
free(dsbufn);
dsbufn=NULL;
}
if (dims) {
free(dims);
dims=NULL;
}
return SUCCEED;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
if (dsbuf)
free(dsbuf);
if (dsbufn)
free(dsbufn);
if (dims)
free(dims);
} H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSis_attached
*
* Purpose: Report if dimension scale DSID is currently attached to
* dimension IDX of dataset DID by checking if DID has a pointer in the REFERENCE_LIST
* attribute and DSID (scale ) has a pointer in the DIMENSION_LIST attribute
*
* Return:
* 1: both the DS and the dataset pointers match
* 0: one of them or both do not match
* FAIL (-1): error
*
* Fails if: Bad arguments
* If DSID is not a Dimension Scale
* If DID is a Dimension Scale (A Dimension Scale cannot have scales)
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: February 18, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
htri_t H5DSis_attached(hid_t did,
hid_t dsid,
unsigned int idx)
{
int has_dimlist;
int has_reflist;
hssize_t nelmts;
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
int rank; /* rank of dataset */
ds_list_t *dsbuf; /* array of attribute data in the DS pointing to the dataset */
hobj_ref_t ref; /* reference to the DS */
hvl_t *buf; /* VL buffer to store in the attribute */
hid_t dsid_j; /* DS dataset ID in DIMENSION_LIST */
hid_t did_i; /* dataset ID in REFERENCE_LIST */
H5O_info_t oi1, oi2, oi3, oi4;
H5I_type_t it1, it2;
int i;
int found_dset=0, found_ds=0;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* the dataset cannot be a DS dataset */
if ((H5DSis_scale(did))==1)
return FAIL;
/* get info for the dataset in the parameter list */
if(H5Oget_info(did, &oi1) < 0)
return FAIL;
/* get info for the scale in the parameter list */
if(H5Oget_info(dsid, &oi2) < 0)
return FAIL;
/* same object, not valid */
if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr)
return FAIL;
/* get ID type */
if ((it1 = H5Iget_type(did)) < 0)
return FAIL;
if ((it2 = H5Iget_type(dsid)) < 0)
return FAIL;
if (H5I_DATASET!=it1 || H5I_DATASET!=it2)
return FAIL;
/*-------------------------------------------------------------------------
* get space
*-------------------------------------------------------------------------
*/
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank=H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* close dataset space */
if (H5Sclose(sid) < 0)
goto out;
/* parameter range checking */
if(idx > ((unsigned)rank - 1))
goto out;
/* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */
if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0)
return FAIL;
/*-------------------------------------------------------------------------
* open "DIMENSION_LIST"
*-------------------------------------------------------------------------
*/
if(has_dimlist == 1)
{
if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if((sid = H5Aget_space(aid)) < 0)
goto out;
/* allocate and initialize the VL */
buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
if(buf == NULL)
goto out;
/* read */
if (H5Aread(aid,tid,buf) < 0)
goto out;
/* iterate all the REFs in this dimension IDX */
for (i=0; i<(int)buf[idx].len; i++)
{
/* get the reference */
ref = ((hobj_ref_t *)buf[idx].p)[i];
/* get the scale id for this REF */
if ((dsid_j = H5Rdereference(did,H5R_OBJECT,&ref)) < 0)
goto out;
/* get info for DS in the parameter list */
if(H5Oget_info(dsid, &oi1) < 0)
goto out;
/* get info for this DS */
if(H5Oget_info(dsid_j, &oi2) < 0)
goto out;
/* same object */
if(oi1.fileno == oi2.fileno && oi1.addr == oi2.addr)
found_ds = 1;
/* close the dereferenced dataset */
if (H5Dclose(dsid_j) < 0)
goto out;
}
/* close */
if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free(buf);
} /* has_dimlist */
/*-------------------------------------------------------------------------
* info on the >>DS<< dataset
*-------------------------------------------------------------------------
*/
/* try to find the attribute "REFERENCE_LIST" on the >>DS<< dataset */
if((has_reflist = H5LT_find_attribute(dsid, REFERENCE_LIST)) < 0)
goto out;
/*-------------------------------------------------------------------------
* open "REFERENCE_LIST"
*-------------------------------------------------------------------------
*/
if(has_reflist == 1)
{
if((aid = H5Aopen(dsid, REFERENCE_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
/* get and save the old reference(s) */
if((sid = H5Aget_space(aid)) < 0)
goto out;
if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0)
goto out;
dsbuf = malloc((size_t)nelmts * sizeof(ds_list_t));
if (dsbuf == NULL)
goto out;
if (H5Aread(aid,tid,dsbuf) < 0)
goto out;
/*-------------------------------------------------------------------------
* iterate
*-------------------------------------------------------------------------
*/
for(i=0; i<nelmts; i++)
{
/* get the reference */
ref = dsbuf[i].ref;
/* the reference was not deleted */
if (ref)
{
/* get the dataset id */
if ((did_i = H5Rdereference(did,H5R_OBJECT,&ref)) < 0)
goto out;
/* get info for dataset in the parameter list */
if(H5Oget_info(did, &oi3) < 0)
goto out;
/* get info for this dataset */
if(H5Oget_info(did_i, &oi4) < 0)
goto out;
/* same object */
if(oi3.fileno == oi4.fileno && oi3.addr == oi4.addr && (int)idx==dsbuf[i].dim_idx)
found_dset=1;
/* close the dereferenced dataset */
if (H5Dclose(did_i) < 0)
goto out;
} /* if */
} /* i */
/* close */
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (dsbuf)
free(dsbuf);
} /* has_reflist */
if (found_ds && found_dset)
return 1;
else
return 0;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
} H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSiterate_scales
*
* Purpose: H5DSiterate_scales iterates over the scales attached to dimension DIM
* of dataset DID. For each scale in the list, the visitor_data and some
* additional information, specified below, are passed to the visitor function.
* The iteration begins with the IDX object in the group and the next element
* to be processed by the operator is returned in IDX. If IDX is NULL, then the
* iterator starts at zero.
*
* Parameters:
*
* hid_t DID; IN: the dataset
* unsigned int dim; IN: the dimension of the dataset
* int *idx; IN/OUT: input the index to start iterating, output the
* next index to visit. If NULL, start at the first position.
* H5DS_iterate_t visitor; IN: the visitor function
* void *visitor_data; IN: arbitrary data to pass to the visitor function.
*
* Iterate over all scales of DIM, calling an application callback
* with the item, key and any operator data.
*
* The operator callback receives a pointer to the item ,
* and the pointer to the operator data passed
* in to H5SL_iterate ('op_data'). The return values from an operator are:
* A. Zero causes the iterator to continue, returning zero when all
* nodes of that type have been processed.
* B. Positive causes the iterator to immediately return that positive
* value, indicating short-circuit success.
* C. Negative causes the iterator to immediately return that value,
* indicating failure.
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 31, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5DSiterate_scales(hid_t did,
unsigned int dim,
int *idx,
H5DS_iterate_t visitor,
void *visitor_data )
{
hid_t scale_id;
int rank;
hobj_ref_t ref; /* reference to the DS */
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
hvl_t *buf=NULL; /* VL buffer to store in the attribute */
H5I_type_t it; /* ID type */
herr_t ret_value=0;
int j_idx;
int nscales;
int has_dimlist;
int i;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(did)) < 0)
return FAIL;
if (H5I_DATASET!=it)
return FAIL;
/* get the number of scales assotiated with this DIM */
if ((nscales = H5DSget_num_scales(did,dim)) < 0)
return FAIL;
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank=H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* close dataset space */
if(H5Sclose(sid) < 0)
goto out;
/* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */
if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0)
return FAIL;
if(has_dimlist == 0)
return SUCCEED;
else if(has_dimlist == 1)
{
if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if((sid = H5Aget_space(aid)) < 0)
goto out;
/* allocate and initialize the VL */
buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
if(buf == NULL)
goto out;
/* read */
if(H5Aread(aid, tid, buf) < 0)
goto out;
if ( buf[dim].len > 0 )
{
if (idx!=NULL)
j_idx = *idx;
else
j_idx=0;
/* iterate */
for(i=j_idx; i<nscales; i++)
{
/* get the reference */
ref = ((hobj_ref_t *)buf[dim].p)[ i ];
/* disable error reporting, the ID might refer to a deleted dataset */
H5E_BEGIN_TRY {
/* get the DS id */
if ((scale_id = H5Rdereference(did,H5R_OBJECT,&ref)) < 0)
goto out;
} H5E_END_TRY;
if((ret_value=(visitor)(did,dim,scale_id,visitor_data))!=0)
{
/* set the return IDX OUT value at current scale index and break */
if (idx!=NULL)
{
*idx = i;
}
/* close the DS id */
if (H5Dclose(scale_id) < 0)
goto out;
break;
}
/* close the DS id */
if (H5Dclose(scale_id) < 0)
goto out;
} /* i */
} /* if */
/* close */
if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free(buf);
} /* if has_dimlist */
return ret_value;
out:
H5E_BEGIN_TRY {
if (buf)
{
H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf);
free(buf);
}
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
} H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSset_label
*
* Purpose: Set label for the dimension IDX of dataset DID to the value LABEL
*
* Return: Success: SUCCEED, Failure: FAIL
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 11, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) {
int has_labels;
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
int rank; /* rank of dataset */
hsize_t dims[1]; /* dimensions of dataset */
const char **buf = NULL; /* buffer to store in the attribute */
H5I_type_t it; /* ID type */
unsigned int i;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(did)) < 0)
return FAIL;
if (H5I_DATASET != it)
return FAIL;
/*-------------------------------------------------------------------------
* attribute "DIMENSION_LABELS"
*-------------------------------------------------------------------------
*/
/* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */
if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0)
return FAIL;
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank = H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* close dataset space */
if (H5Sclose(sid) < 0)
goto out;
/*-------------------------------------------------------------------------
* make the attribute and insert label
*-------------------------------------------------------------------------
*/
if (has_labels == 0) {
dims[0] = rank;
/* space for the attribute */
if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
goto out;
/* create the datatype */
if ((tid = H5Tcopy(H5T_C_S1)) < 0)
goto out;
if (H5Tset_size(tid, H5T_VARIABLE) < 0)
goto out;
/* create the attribute */
if ((aid = H5Acreate2(did, DIMENSION_LABELS, tid, sid,
H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto out;
/* allocate and initialize */
buf = (const char **) malloc((size_t) rank * sizeof(char *));
if (buf == NULL)
goto out;
for (i = 0; i < (unsigned int) rank; i++)
buf[i] = NULL;
/* store the label information in the required index */
buf[idx] = label;
/* write the attribute with the label */
if (H5Awrite(aid, tid, buf) < 0)
goto out;
/* close */
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free((void *) buf);
}
/*-------------------------------------------------------------------------
* just insert label
*-------------------------------------------------------------------------
*/
else {
if ((aid = H5Aopen(did, DIMENSION_LABELS, H5P_DEFAULT)) < 0)
goto out;
if ((tid = H5Aget_type(aid)) < 0)
goto out;
/* allocate and initialize */
buf = (const char **) malloc((size_t) rank * sizeof(char *));
if (buf == NULL)
goto out;
/* read */
if (H5Aread(aid, tid, (void *) buf) < 0)
goto out;
/* free the ptr that will be replaced by label */
if (buf[idx])
free(buf[idx]);
/* store the label information in the required index */
buf[idx] = label;
/* write the attribute with the new references */
if (H5Awrite(aid, tid, buf) < 0)
goto out;
/* label was brought in, so don't free */
buf[idx] = NULL;
/* free all the ptr's from the H5Aread() */
for (i = 0; i < (unsigned int) rank; i++) {
if (buf[i])
free(buf[i]);
}
/* close */
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free((void *) buf);
}
return SUCCEED;
/* error zone, gracefully close */
out:
if (buf) {
if (buf[idx]) /* check if we errored during H5Awrite */
buf[idx] = NULL; /* don't free label */
/* free all the ptr's from the H5Aread() */
for (i = 0; i < (unsigned int) rank; i++) {
if (buf[i])
free(buf[i]);
}
free(buf);
}
H5E_BEGIN_TRY
{
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
}H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSget_label
*
* Purpose: Read the label LABEL for dimension IDX of dataset DID
* Up to 'size' characters are stored in 'label' followed by a '\0' string
* terminator. If the label is longer than 'size'-1,
* the string terminator is stored in the last position of the buffer to
* properly terminate the string.
*
* Return: 0 if no label found, size of label if found, Failure: FAIL
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 11, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) {
int has_labels;
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
int rank; /* rank of dataset */
char **buf = NULL; /* buffer to store in the attribute */
H5I_type_t it; /* ID type */
size_t nbytes;
size_t copy_len;
int i;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(did)) < 0)
return FAIL;
if (H5I_DATASET != it)
return FAIL;
/*-------------------------------------------------------------------------
* attribute "DIMENSION_LABELS"
*-------------------------------------------------------------------------
*/
/* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */
if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0)
return FAIL;
/* return 0 and NULL for label if no label found */
if (has_labels == 0) {
if (label)
/* label = NULL;
*/
label[0] = 0;
return 0;
}
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank = H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* close dataset space */
if (H5Sclose(sid) < 0)
goto out;
/*-------------------------------------------------------------------------
* open the attribute and read label
*-------------------------------------------------------------------------
*/
assert (has_labels == 1);
if ((aid = H5Aopen(did, DIMENSION_LABELS, H5P_DEFAULT)) < 0)
goto out;
if ((tid = H5Aget_type(aid)) < 0)
goto out;
/* allocate and initialize */
buf = (char **) malloc((size_t) rank * sizeof(char *));
if (buf == NULL)
goto out;
/* read */
if (H5Aread(aid, tid, buf) < 0)
goto out;
/* get the real string length */
nbytes = strlen(buf[idx]);
/* compute the string length which will fit into the user's buffer */
copy_len = MIN(size-1, nbytes);
/* copy all/some of the name */
if (label) {
memcpy(label, buf[idx], copy_len);
/* terminate the string */
label[copy_len] = '\0';
}
/* free all the ptr's from the H5Aread() */
for (i = 0; i < (unsigned int) rank; i++) {
if (buf[i])
free(buf[i]);
}
/* close */
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free(buf);
return (ssize_t) nbytes;
/* error zone, gracefully close */
out:
if (buf) {
/* free all the ptr's from the H5Aread() */
for (i = 0; i < (unsigned int) rank; i++) {
if (buf[i])
free(buf[i]);
}
free(buf);
}
H5E_BEGIN_TRY
{
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
}H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSget_scale_name
*
* Purpose: Read the name of dataset scale DID into buffer NAME
* Up to 'size' characters are stored in 'name' followed by a '\0' string
* terminator. If the name is longer than 'size'-1,
* the string terminator is stored in the last position of the buffer to
* properly terminate the string.
*
* Return: size of name if found, zero if not found, Failure: FAIL
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 04, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
ssize_t H5DSget_scale_name(hid_t did,
char *name,
size_t size)
{
hid_t aid; /* attribute ID */
hid_t tid = -1; /* attribute type ID */
hid_t sid; /* space ID */
H5I_type_t it; /* ID type */
size_t nbytes;
size_t copy_len;
int has_name;
char *buf=NULL;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(did)) < 0)
return FAIL;
if (H5I_DATASET!=it)
return FAIL;
if ((H5DSis_scale(did))<=0)
return FAIL;
/*-------------------------------------------------------------------------
* check if the DS has a name
*-------------------------------------------------------------------------
*/
/* try to find the attribute "NAME" on the >>DS<< dataset */
if((has_name = H5LT_find_attribute(did, "NAME")) < 0)
return FAIL;
if(has_name == 0)
return 0;
/*-------------------------------------------------------------------------
* open the attribute
*-------------------------------------------------------------------------
*/
if((aid = H5Aopen(did, "NAME", H5P_DEFAULT)) < 0)
return FAIL;
/* get space */
if((sid = H5Aget_space(aid)) < 0)
goto out;
/* get type */
if((tid = H5Aget_type(aid)) < 0)
goto out;
/* get the size */
if((nbytes = H5Tget_size(tid)) == 0)
goto out;
/* allocate a temporary buffer */
buf = (char*)malloc(nbytes * sizeof(char));
if (buf == NULL)
goto out;
/* read */
if (H5Aread(aid,tid,buf) < 0)
goto out;
/* compute the string length which will fit into the user's buffer */
copy_len = MIN(size-1, nbytes);
/* copy all/some of the name */
if (name) {
memcpy(name, buf, copy_len);
/* terminate the string */
name[copy_len]='\0';
}
/* close */
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (buf)
{
free(buf);
buf=NULL;
}
return (ssize_t) nbytes;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Aclose(aid);
H5Tclose(tid);
H5Sclose(sid);
} H5E_END_TRY;
if (buf)
free(buf);
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSis_scale
*
* Purpose: check if the dataset DID is a dimension scale
*
* Return: 1, is, 0, not, FAIL, error
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 04, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
htri_t H5DSis_scale(hid_t did)
{
hid_t tid = -1; /* attribute type ID */
hid_t aid; /* attribute ID */
herr_t has_class; /* has the "CLASS" attribute */
htri_t is_ds; /* boolean return value */
H5I_type_t it; /* ID type */
char buf[20];
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(did)) < 0)
return FAIL;
if(H5I_DATASET != it)
return FAIL;
/* try to find the attribute "CLASS" on the dataset */
if((has_class = H5LT_find_attribute(did, "CLASS")) < 0)
return FAIL;
if(has_class == 0)
is_ds = 0;
else
{
if((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if(H5Aread(aid, tid, buf) < 0)
goto out;
if(strcmp(buf, DIMENSION_SCALE_CLASS)==0)
is_ds = 1;
else
is_ds = 0;
if(H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
}
return is_ds;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Aclose(aid);
H5Tclose(tid);
} H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DSget_num_scales
*
* Purpose: get the number of scales linked to the IDX dimension of dataset DID
*
* Return:
* Success: number of scales
* Failure: FAIL
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: January 13, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int H5DSget_num_scales(hid_t did,
unsigned int idx)
{
int has_dimlist;
hid_t sid; /* space ID */
hid_t tid = -1; /* attribute type ID */
hid_t aid = -1; /* attribute ID */
int rank; /* rank of dataset */
hvl_t *buf; /* VL buffer to store in the attribute */
H5I_type_t it; /* ID type */
int nscales;
/*-------------------------------------------------------------------------
* parameter checking
*-------------------------------------------------------------------------
*/
/* get ID type */
if ((it = H5Iget_type(did)) < 0)
return FAIL;
if (H5I_DATASET!=it)
return FAIL;
/*-------------------------------------------------------------------------
* the attribute "DIMENSION_LIST" on the >>data<< dataset must exist
*-------------------------------------------------------------------------
*/
/* get dataset space */
if ((sid = H5Dget_space(did)) < 0)
return FAIL;
/* get rank */
if ((rank=H5Sget_simple_extent_ndims(sid)) < 0)
goto out;
/* close dataset space */
if (H5Sclose(sid) < 0)
goto out;
/* dimemsion index IDX range checking */
if (idx>=(unsigned int )rank)
return FAIL;
/* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */
if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0)
return FAIL;
/* it does not exist */
if(has_dimlist == 0)
return 0;
/*-------------------------------------------------------------------------
* the attribute exists, open it
*-------------------------------------------------------------------------
*/
else
{
if((aid = H5Aopen(did, DIMENSION_LIST, H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if((sid = H5Aget_space(aid)) < 0)
goto out;
/* allocate and initialize the VL */
buf = (hvl_t*)malloc((size_t)rank * sizeof(hvl_t));
if(buf == NULL)
goto out;
/* read */
if(H5Aread(aid, tid, buf) < 0)
goto out;
nscales=(int)buf[idx].len;
/* close */
if (H5Dvlen_reclaim(tid,sid,H5P_DEFAULT,buf) < 0)
goto out;
if (H5Sclose(sid) < 0)
goto out;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
if (buf)
free(buf);
} /* has_dimlist */
return nscales;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Aclose(aid);
H5Tclose(tid);
} H5E_END_TRY;
return FAIL;
}
/*-------------------------------------------------------------------------
* Function: H5DS_is_reserved
*
* Purpose: Verify that a dataset's CLASS is either an image, palette or table
*
* Return: true, false, fail
*
* Programmer: pvn@ncsa.uiuc.edu
*
* Date: March 19, 2005
*
* Comments:
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t H5DS_is_reserved(hid_t did)
{
int has_class;
hid_t tid = -1;
hid_t aid = -1;
char buf[40];
herr_t ret;
/* try to find the attribute "CLASS" on the dataset */
if((has_class = H5LT_find_attribute(did, "CLASS")) < 0)
return -1;
if(has_class == 0)
return 0;
assert(has_class == 1);
if((aid = H5Aopen(did, "CLASS", H5P_DEFAULT)) < 0)
goto out;
if((tid = H5Aget_type(aid)) < 0)
goto out;
if(H5Aread(aid, tid, buf) < 0)
goto out;
if(strcmp(buf, IMAGE_CLASS) == 0 ||
strcmp(buf, PALETTE_CLASS) == 0 ||
strcmp(buf, TABLE_CLASS) == 0 )
ret = 1;
else
ret = 0;
if (H5Tclose(tid) < 0)
goto out;
if (H5Aclose(aid) < 0)
goto out;
return ret;
/* error zone, gracefully close */
out:
H5E_BEGIN_TRY {
H5Tclose(tid);
H5Aclose(aid);
} H5E_END_TRY;
return FAIL;
}
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