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path: root/hl/src/H5TB.c
blob: da2f37289450b2aa1edd3cc6b476bf52b8c284be (plain)
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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group.                                               *
* Copyright by the Board of Trustees of the University of Illinois.         *
* All rights reserved.                                                      *
*                                                                           *
* This file is part of HDF5.  The full HDF5 copyright notice, including     *
* terms governing use, modification, and redistribution, is contained in    *
* the files COPYING and Copyright.html.  COPYING can be found at the root   *
* of the source code distribution tree; Copyright.html can be found at the  *
* root level of an installed copy of the electronic HDF5 document set and   *
* is linked from the top-level documents page.  It can also be found at     *
* http://hdfgroup.org/HDF5/doc/Copyright.html.  If you do not have          *
* access to either file, you may request a copy from help@hdfgroup.org.     *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

#include <stdlib.h>
#include <string.h>
#include "H5private.h"
#include "H5LTprivate.h"
#include "H5TBprivate.h"


/*-------------------------------------------------------------------------
*
* internal functions
*
*-------------------------------------------------------------------------
*/

static hbool_t H5TB_find_field(const char *field,
                           const char *field_list);

static herr_t H5TB_attach_attributes(const char *table_title,
                                     hid_t loc_id,
                                     const char *dset_name,
                                     hsize_t nfields,
                                     hid_t tid);

static hid_t H5TB_create_type(hid_t loc_id,
                              const char *dset_name,
                              size_t type_size,
                              const size_t *field_offset,
                              const size_t *field_sizes,
                              hid_t ftype_id);

/*-------------------------------------------------------------------------
*
* Create functions
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TBmake_table
*
* Purpose: Make a table
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*             Quincey Koziol
*
* Date: January 17, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBmake_table(const char *table_title,
                      hid_t loc_id,
                      const char *dset_name,
                      hsize_t nfields,
                      hsize_t nrecords,
                      size_t type_size,
                      const char *field_names[],
                      const size_t *field_offset,
                      const hid_t *field_types,
                      hsize_t chunk_size,
                      void *fill_data,
                      int compress,
                      const void *buf)
{
    hid_t   did = H5I_BADID;
    hid_t   sid = H5I_BADID;
    hid_t   mem_type_id = H5I_BADID;
    hid_t   plist_id = H5I_BADID;
    hid_t   attr_id = H5I_BADID;
    hsize_t dims[1];
    hsize_t dims_chunk[1];
    hsize_t maxdims[1] = {H5S_UNLIMITED};
    char    attr_name[255];
    char    *member_name = NULL;
    unsigned char *tmp_buf = NULL;
    hsize_t i;
    herr_t  ret_val = -1;

    dims[0]       = nrecords;
    dims_chunk[0] = chunk_size;

    /* create the memory data type. */
    if((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0)
        goto out;

    /* insert fields. */
    for(i = 0; i < nfields; i++)
        if(H5Tinsert(mem_type_id, field_names[i], field_offset[i], field_types[i] ) < 0)
            goto out;

    /* create a simple data space with unlimited size */
    if((sid = H5Screate_simple(1, dims, maxdims)) < 0)
        goto out;

    /* modify dataset creation properties, i.e. enable chunking  */
    if((plist_id = H5Pcreate(H5P_DATASET_CREATE)) < 0)
        goto out;
    if(H5Pset_chunk(plist_id, 1, dims_chunk) < 0)
        goto out;

    /* set the fill value using a struct as the data type. */
    if(fill_data)
        if(H5Pset_fill_value(plist_id, mem_type_id, fill_data) < 0)
            goto out;

    /*
    dataset creation property list is modified to use
    GZIP compression with the compression effort set to 6.
    */
    if(compress)
        if(H5Pset_deflate(plist_id, 6) < 0)
            goto out;

    /* create the dataset. */
    if((did = H5Dcreate2(loc_id, dset_name, mem_type_id, sid, H5P_DEFAULT, plist_id, H5P_DEFAULT)) < 0)
        goto out;

    /* only write if there is something to write */
    if(buf)
        if(H5Dwrite(did, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
            goto out;

    /* terminate access to the data space. */
    if(H5Sclose(sid) < 0)
        goto out;
    sid = H5I_BADID;

    /* end access to the dataset */
    if(H5Dclose(did) < 0)
        goto out;
    did = H5I_BADID;

    /* end access to the property list */
    if(H5Pclose(plist_id) < 0)
        goto out;
    plist_id = H5I_BADID;

    /*-------------------------------------------------------------------------
    * set the conforming table attributes
    *-------------------------------------------------------------------------
    */

    /* attach the CLASS attribute */
    if(H5LTset_attribute_string(loc_id, dset_name, "CLASS", TABLE_CLASS) < 0)
        goto out;

    /* attach the VERSION attribute */
    if(H5LTset_attribute_string(loc_id, dset_name, "VERSION", TABLE_VERSION) < 0)
        goto out;

    /* attach the TITLE attribute */
    if(H5LTset_attribute_string(loc_id, dset_name, "TITLE", table_title) < 0)
        goto out;

    /* attach the FIELD_ name attribute */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(mem_type_id, (unsigned)i)))
            goto out;

        HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_NAME", (int)i);

        /* attach the attribute */
        if(H5LTset_attribute_string(loc_id, dset_name, attr_name, member_name) < 0)
            goto out;

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /* attach the FIELD_ fill value attribute */
    if(fill_data) {
        tmp_buf = (unsigned char *)fill_data;

        /* open the dataset. */
        if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
            goto out;

        if((sid = H5Screate(H5S_SCALAR)) < 0)
            goto out;

        for(i = 0; i < nfields; i++) {
            HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i);

            if((attr_id = H5Acreate2(did, attr_name, field_types[i], sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
                goto out;

            if(H5Awrite(attr_id, field_types[i], tmp_buf + field_offset[i]) < 0)
                goto out;

            if(H5Aclose(attr_id) < 0)
                goto out;
            attr_id = H5I_BADID;
        } /* end for */

        /* terminate access to the data space. */
        if(H5Sclose(sid) < 0)
            goto out;
        sid = H5I_BADID;

        /* end access to the dataset */
        if(H5Dclose(did) < 0)
            goto out;
        did = H5I_BADID;
    } /* end if */

    /* release the datatype. */
    if(H5Tclose(mem_type_id) < 0)
        goto out;
    mem_type_id = H5I_BADID;

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(attr_id > 0)
        if(H5Aclose(attr_id) < 0)
            ret_val = -1;
    if(plist_id > 0)
        if(H5Pclose(plist_id) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBmake_table() */

/*-------------------------------------------------------------------------
*
* Write functions
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TBappend_records
*
* Purpose: Appends records to a table
*
* Return: Success: 0, Failure: -1
*
* Programmers:
*  Pedro Vicente, pvn@ncsa.uiuc.edu
*  Quincey Koziol
*
* Date: November 19, 2001
*
* Comments: Uses memory offsets
*
*-------------------------------------------------------------------------
*/
herr_t H5TBappend_records(hid_t loc_id,
                          const char *dset_name,
                          hsize_t nrecords,
                          size_t type_size,
                          const size_t *field_offset,
                          const size_t *field_sizes,
                          const void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hsize_t  nrecords_orig;
    hsize_t  nfields;
    herr_t   ret_val = -1;

    /* get the original number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords_orig) < 0)
        goto out;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatypes */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0)
        goto out;

    /* append the records */
    if((H5TB_common_append_records(did, mem_type_id, (size_t)nrecords, nrecords_orig, buf)) < 0)
        goto out;

    ret_val = 0;

out:
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBappend_records() */

/*-------------------------------------------------------------------------
* Function: H5TBwrite_records
*
* Purpose: Writes records
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
* Comments: Uses memory offsets
*
*-------------------------------------------------------------------------
*/
herr_t H5TBwrite_records(hid_t loc_id,
                         const char *dset_name,
                         hsize_t start,
                         hsize_t nrecords,
                         size_t type_size,
                         const size_t *field_offset,
                         const size_t *field_sizes,
                         const void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    hsize_t  dims[1];
    herr_t   ret_val = -1;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0)
        goto out;

    /* get the dataspace handle */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* get records */
    if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0)
        goto out;

    if(start + nrecords > dims[0])
        goto out;

    /* define a hyperslab in the dataset of the size of the records */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBwrite_records() */

/*-------------------------------------------------------------------------
* Function: H5TBwrite_fields_name
*
* Purpose: Writes fields
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 21, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBwrite_fields_name(hid_t loc_id,
                             const char *dset_name,
                             const char *field_names,
                             hsize_t start,
                             hsize_t nrecords,
                             size_t type_size,
                             const size_t *field_offset,
                             const size_t *field_sizes,
                             const void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    write_type_id = H5I_BADID;
    hid_t    member_type_id = H5I_BADID;
    hid_t    nmtype_id = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hid_t    file_space_id = H5I_BADID;
    hid_t    preserve_id = H5I_BADID;
    hssize_t nfields;
    hssize_t i, j;
    hsize_t  count[1];
    hsize_t  offset[1];
    char     *member_name = NULL;
    size_t   size_native;
    herr_t   ret_val = -1;

    /* create xfer properties to preserve initialized data */
    if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
        goto out;
    if(H5Pset_preserve(preserve_id, 1) < 0)
        goto out;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    /* get the number of fields */
    if((nfields = H5Tget_nmembers(tid)) < 0)
        goto out;

    /* create a write id */
    if((write_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0)
        goto out;

    j = 0;

    /* iterate though the members */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)i)))
            goto out;

        if(H5TB_find_field(member_name, field_names)) {
            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid, (unsigned)i)) < 0)
                goto out;

            /* convert to native type */
            if((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0)
                goto out;

            if(0 == (size_native = H5Tget_size(nmtype_id)))
                goto out;

            /* adjust, if necessary */
            if(field_sizes[j] != size_native)
                if(H5Tset_size(nmtype_id, field_sizes[j]) < 0)
                    goto out;

            /* the field in the file is found by its name */
            if(field_offset) {
                if(H5Tinsert(write_type_id, member_name, field_offset[j], nmtype_id) < 0)
                    goto out;
            } /* end if */
            /* only one field */
            else {
                if(H5Tinsert(write_type_id, member_name, (size_t)0, nmtype_id) < 0)
                    goto out;
            } /* end else */

            j++;

            /* close */
            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;
            if(H5Tclose(nmtype_id) < 0)
                goto out;
            nmtype_id = H5I_BADID;
        } /* end if */

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /* get the dataspace handle */
    if((file_space_id = H5Dget_space(did)) < 0)
        goto out;
    if((m_sid = H5Screate_simple(1, &nrecords, NULL)) < 0)
        goto out;

    /* define a hyperslab in the dataset */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(file_space_id, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* write */
    if(H5Dwrite(did, write_type_id, m_sid, file_space_id, preserve_id, buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(preserve_id > 0)
        if(H5Pclose(preserve_id) < 0)
            ret_val = -1;
    if(write_type_id > 0)
        if(H5Tclose(write_type_id) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(file_space_id > 0)
        if(H5Sclose(file_space_id) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBwrite_fields_name() */

/*-------------------------------------------------------------------------
* Function: H5TBwrite_fields_index
*
* Purpose: Writes fields
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 21, 2001
*
* Comments: Uses memory offsets
*
*-------------------------------------------------------------------------
*/
herr_t H5TBwrite_fields_index(hid_t loc_id,
                              const char *dset_name,
                              hsize_t nfields,
                              const int *field_index,
                              hsize_t start,
                              hsize_t nrecords,
                              size_t type_size,
                              const size_t *field_offset,
                              const size_t *field_sizes,
                              const void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    write_type_id = H5I_BADID;
    hid_t    member_type_id = H5I_BADID;
    hid_t    nmtype_id = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hid_t    file_space_id = H5I_BADID;
    hid_t    preserve_id = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  i;
    size_t   size_native;
    char    *member_name = NULL;
    herr_t   ret_val = -1;

    /* create xfer properties to preserve initialized data */
    if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
        goto out;
    if(H5Pset_preserve(preserve_id, 1) < 0)
        goto out;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    /* create a write id */
    if((write_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0)
        goto out;

    /* iterate tru the members */
    for(i = 0; i < nfields; i++) {
        unsigned  j;

        /* Range check value */
        if(field_index[i] < 0)
            goto out;

        j = (unsigned)field_index[i];

        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid, j)))
            goto out;

        /* get the member type */
        if((member_type_id = H5Tget_member_type(tid, j)) < 0)
            goto out;

        /* convert to native type */
        if((nmtype_id = H5Tget_native_type(member_type_id,H5T_DIR_DEFAULT)) < 0)
            goto out;

        if(0 == (size_native = H5Tget_size(nmtype_id)))
            goto out;

        if(field_sizes[i] != size_native)
            if(H5Tset_size(nmtype_id, field_sizes[i]) < 0)
                goto out;

        /* the field in the file is found by its name */
        if(field_offset) {
            if(H5Tinsert(write_type_id, member_name, field_offset[i], nmtype_id) < 0)
                goto out;
        } /* end if */
        /* only one field */
        else {
            if(H5Tinsert(write_type_id, member_name, (size_t)0, nmtype_id) < 0)
                goto out;
        } /* end else */

        /* close */
        if(H5Tclose(member_type_id) < 0)
            goto out;
        member_type_id = H5I_BADID;
        if(H5Tclose(nmtype_id) < 0)
            goto out;
        nmtype_id = H5I_BADID;

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /* get the dataspace handles */
    if((file_space_id = H5Dget_space(did)) < 0)
        goto out;
    if((m_sid = H5Screate_simple(1, &nrecords, NULL)) < 0)
        goto out;

    /* define a hyperslab in the dataset */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(file_space_id, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* write */
    if(H5Dwrite(did, write_type_id, m_sid, file_space_id, preserve_id, buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(preserve_id > 0)
        if(H5Pclose(preserve_id) < 0)
            ret_val = -1;
    if(write_type_id > 0)
        if(H5Tclose(write_type_id) < 0)
            ret_val = -1;
    if(member_type_id > 0)
        if(H5Tclose(member_type_id) < 0)
            ret_val = -1;
    if(nmtype_id > 0)
        if(H5Tclose(nmtype_id) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(file_space_id > 0)
        if(H5Sclose(file_space_id) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBwrite_fields_index() */


/*-------------------------------------------------------------------------
*
* Read functions
*
*-------------------------------------------------------------------------
*/


/*-------------------------------------------------------------------------
* Function: H5TBread_table
*
* Purpose: Reads a table
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 20, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBread_table(hid_t loc_id,
                      const char *dset_name,
                      size_t type_size,
                      const size_t *field_offset,
                      const size_t *field_sizes,
                      void *dst_buf)
{
    hid_t    did = H5I_BADID;
    hid_t    ftype_id = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hsize_t  dims[1];
    herr_t   ret_val = -1;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the dataspace handle */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* get dimensions */
    if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0)
        goto out;

    /* get the datatypes */
    if((ftype_id = H5Dget_type (did)) < 0)
        goto out;

    if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, ftype_id)) < 0)
        goto out;

    /* read */
    if(H5Dread(did, mem_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, dst_buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(ftype_id > 0)
        if(H5Tclose(ftype_id) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBread_table() */

/*-------------------------------------------------------------------------
* Function: H5TBread_records
*
* Purpose: Reads records
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBread_records(hid_t loc_id,
                        const char *dset_name,
                        hsize_t start,
                        hsize_t nrecords,
                        size_t type_size,
                        const size_t *field_offset,
                        const size_t *field_sizes,
                        void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    ftype_id = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hsize_t  nrecords_orig;
    hsize_t  nfields;
    herr_t   ret_val = -1;

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords_orig) < 0)
        goto out;

    /* open the dataset */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatypes */
    if((ftype_id = H5Dget_type(did)) < 0)
        goto out;

    if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, ftype_id)) < 0)
        goto out;

    /* read the records */
    if((H5TB_common_read_records(did, mem_type_id, start, (size_t)nrecords, nrecords_orig, buf)) < 0)
        goto out;

    ret_val = 0;

out:
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(ftype_id > 0)
        if(H5Tclose(ftype_id) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBread_records() */

/*-------------------------------------------------------------------------
* Function: H5TBread_fields_name
*
* Purpose: Reads fields
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBread_fields_name(hid_t loc_id,
                            const char *dset_name,
                            const char *field_names,
                            hsize_t start,
                            hsize_t nrecords,
                            size_t type_size,
                            const size_t *field_offset,
                            const size_t *field_sizes,
                            void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    ftype_id = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hid_t    mtype_id = H5I_BADID;
    hid_t    nmtype_id = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hssize_t nfields;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    size_t   size_native;
    char    *member_name = NULL;
    hssize_t i, j;
    herr_t   ret_val = -1;

    /* open the dataset */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((ftype_id = H5Dget_type(did)) < 0)
        goto out;

    /* get the number of fields */
    if((nfields = H5Tget_nmembers(ftype_id)) < 0)
        goto out;

    /* create a memory read id */
    if((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0)
        goto out;

    /* iterate tru the members */
    for(i = 0, j = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(ftype_id, (unsigned)i)))
            goto out;

        if(H5TB_find_field(member_name, field_names)) {
            /* get the member type */
            if((mtype_id = H5Tget_member_type(ftype_id, (unsigned)i)) < 0)
                goto out;

            /* convert to native type */
            if((nmtype_id = H5Tget_native_type(mtype_id, H5T_DIR_DEFAULT)) < 0)
                goto out;

            if(0 == (size_native = H5Tget_size(nmtype_id)))
                goto out;

            if(field_sizes[j] != size_native)
                if(H5Tset_size(nmtype_id, field_sizes[j]) < 0)
                    goto out;

            /* the field in the file is found by its name */
            if(field_offset) {
                if(H5Tinsert(mem_type_id, member_name, field_offset[j], nmtype_id) < 0)
                    goto out;
            } /* end if */
            else {
                if(H5Tinsert(mem_type_id, member_name, (size_t)0, nmtype_id) < 0)
                    goto out;
            } /* end else */

            /* close */
            if(H5Tclose(mtype_id) < 0)
                goto out;
            mtype_id = H5I_BADID;
            if(H5Tclose(nmtype_id) < 0)
                goto out;
            nmtype_id = H5I_BADID;
            j++;
        } /* end if */

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /* get the dataspace handle */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* define a hyperslab in the dataset */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    /* read */
    if(H5Dread(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(mtype_id > 0)
        if(H5Tclose(mtype_id) < 0)
            ret_val = -1;
    if(nmtype_id > 0)
        if(H5Tclose(nmtype_id) < 0)
            ret_val = -1;
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(ftype_id > 0)
        if(H5Tclose(ftype_id) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBread_fields_name() */

/*-------------------------------------------------------------------------
* Function: H5TBread_fields_index
*
* Purpose: Reads fields
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBread_fields_index(hid_t loc_id,
                             const char *dset_name,
                             hsize_t nfields,
                             const int *field_index,
                             hsize_t start,
                             hsize_t nrecords,
                             size_t type_size,
                             const size_t *field_offset,
                             const size_t *field_sizes,
                             void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    read_type_id = H5I_BADID;
    hid_t    member_type_id = H5I_BADID;
    hid_t    nmtype_id = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    hsize_t  i;
    size_t   size_native;
    char    *member_name = NULL;
    herr_t   ret_val = -1;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    /* create a read id */
    if((read_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0)
        goto out;

    /* iterate tru the members */
    for(i = 0; i < nfields; i++) {
        unsigned  j;

        /* Range check */
        if(field_index[i] < 0)
            goto out;

        j = (unsigned)field_index[i];

        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)j)))
            goto out;

        /* get the member type */
        if((member_type_id = H5Tget_member_type(tid, (unsigned)j)) < 0)
            goto out;

        /* convert to native type */
        if((nmtype_id = H5Tget_native_type(member_type_id, H5T_DIR_DEFAULT)) < 0)
            goto out;

        if(0 == (size_native = H5Tget_size(nmtype_id)))
            goto out;

        if(field_sizes[i] != size_native)
            if(H5Tset_size(nmtype_id, field_sizes[i]) < 0)
                goto out;

        /* the field in the file is found by its name */
        if(field_offset) {
            if(H5Tinsert(read_type_id, member_name, field_offset[i], nmtype_id) < 0)
                goto out;
        } /* end if */
        else {
            if(H5Tinsert(read_type_id, member_name, (size_t)0, nmtype_id) < 0)
                goto out;
        } /* end else */

        /* close the member type */
        if(H5Tclose(member_type_id) < 0)
            goto out;
        member_type_id = H5I_BADID;
        if(H5Tclose(nmtype_id) < 0)
            goto out;
        nmtype_id = H5I_BADID;

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /* get the dataspace handle */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* define a hyperslab in the dataset */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    /* read */
    if(H5Dread( did, read_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(read_type_id > 0)
        if(H5Tclose(read_type_id) < 0)
            ret_val = -1;
    if(member_type_id > 0)
        if(H5Tclose(member_type_id) < 0)
            ret_val = -1;
    if(nmtype_id > 0)
        if(H5Tclose(nmtype_id) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBread_fields_index() */


/*-------------------------------------------------------------------------
*
* Manipulation functions
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TBdelete_record
*
* Purpose: Delete records from middle of table ("pulling up" all the records after it)
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 26, 2001
*
*-------------------------------------------------------------------------
*/
herr_t H5TBdelete_record(hid_t loc_id,
                         const char *dset_name,
                         hsize_t start,
                         hsize_t nrecords)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hsize_t  nfields;
    hsize_t  ntotal_records;
    hsize_t  read_start;
    hsize_t  read_nrecords;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    hsize_t  dims[1];
    size_t   src_size;
    size_t  *src_offset = NULL;
    size_t  *src_sizes = NULL;
    unsigned char *tmp_buf = NULL;
    herr_t   ret_val = -1;

    /*-------------------------------------------------------------------------
    * first we get information about type size and offsets on disk
    *-------------------------------------------------------------------------
    */

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &ntotal_records) < 0)
        goto out;

    if(NULL == (src_offset = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
        goto out;
    if(NULL == (src_sizes = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
        goto out;

    /* get field info */
    if(H5TBget_field_info(loc_id, dset_name, NULL, src_sizes, src_offset, &src_size) < 0)
        goto out;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * read the records after the deleted one(s)
    *-------------------------------------------------------------------------
    */

    read_start = start + nrecords;
    read_nrecords = ntotal_records - read_start;

    if(read_nrecords) {
        if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)read_nrecords, src_size)))
            goto out;

        /* read the records after the deleted one(s) */
        if(H5TBread_records(loc_id, dset_name, read_start, read_nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0)
            goto out;

        /*-------------------------------------------------------------------------
        * write the records in another position
        *-------------------------------------------------------------------------
        */

        /* get the datatype */
        if((tid = H5Dget_type(did)) < 0)
            goto out;

        /* get the dataspace handle */
        if((sid = H5Dget_space(did)) < 0)
            goto out;

	/* create the memory data type. */
	if((mem_type_id = H5TB_create_type( loc_id, dset_name, src_size, src_offset, src_sizes, tid)) < 0)
	    goto out;

        /* define a hyperslab in the dataset of the size of the records */
        offset[0] = start;
        count[0]  = read_nrecords;
        if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
            goto out;

        /* create a memory dataspace handle */
        mem_size[0] = count[0];
        if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
            goto out;

        if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0)
            goto out;

        /* close */
        if(H5Sclose(m_sid) < 0)
            goto out;
        m_sid = H5I_BADID;
	if(H5Tclose(mem_type_id) < 0)
	    goto out;
        mem_type_id = H5I_BADID;
        if(H5Sclose(sid) < 0)
            goto out;
        sid = H5I_BADID;
        if(H5Tclose(tid) < 0)
            goto out;
        tid = H5I_BADID;
    } /* read_nrecords */

    /*-------------------------------------------------------------------------
    * change the dataset dimension
    *-------------------------------------------------------------------------
    */
    dims[0] = ntotal_records - nrecords;
    if(H5Dset_extent(did, dims) < 0)
        goto out;

    ret_val = 0;

out:
    if(tmp_buf)
        free(tmp_buf);
    if(src_offset)
        free(src_offset);
    if(src_sizes)
        free(src_sizes);
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBdelete_record() */

/*-------------------------------------------------------------------------
* Function: H5TBinsert_record
*
* Purpose: Inserts records into middle of table ("pushing down" all the records after it)
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 26, 2001
*
* Comments: Uses memory offsets
*
*-------------------------------------------------------------------------
*/
herr_t H5TBinsert_record(hid_t loc_id,
                         const char *dset_name,
                         hsize_t start,
                         hsize_t nrecords,
                         size_t type_size,
                         const size_t *field_offset,
                         const size_t *field_sizes,
                         void *buf)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    mem_type_id = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hsize_t  nfields;
    hsize_t  ntotal_records;
    hsize_t  read_nrecords;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  dims[1];
    hsize_t  mem_dims[1];
    unsigned char *tmp_buf = NULL;
    herr_t   ret_val = -1;

    /*-------------------------------------------------------------------------
    * read the records after the inserted one(s)
    *-------------------------------------------------------------------------
    */

    /* get the dimensions  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &ntotal_records) < 0)
        goto out;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    /* create the memory data type. */
    if((mem_type_id = H5TB_create_type(loc_id, dset_name, type_size, field_offset, field_sizes, tid)) < 0)
        goto out;

    read_nrecords = ntotal_records - start;
    if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t) read_nrecords, type_size)))
        goto out;

    /* read the records after the inserted one(s) */
    if(H5TBread_records(loc_id, dset_name, start, read_nrecords, type_size, field_offset, field_sizes, tmp_buf) < 0)
        goto out;

    /* extend the dataset */
    dims[0] = ntotal_records + nrecords;

    if(H5Dset_extent(did, dims) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * write the inserted records
    *-------------------------------------------------------------------------
    */

    /* create a simple memory data space */
    mem_dims[0] = nrecords;
    if((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0)
        goto out;

    /* get the file data space */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* define a hyperslab in the dataset to write the new data */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0)
        goto out;

    /* terminate access to the dataspace */
    if(H5Sclose(m_sid) < 0)
        goto out;
    m_sid = H5I_BADID;
    if(H5Sclose(sid) < 0)
        goto out;
    sid = H5I_BADID;

    /*-------------------------------------------------------------------------
    * write the "pushed down" records
    *-------------------------------------------------------------------------
    */

    /* create a simple memory data space */
    mem_dims[0] = read_nrecords;
    if((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0)
        goto out;

    /* get the file data space */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* define a hyperslab in the dataset to write the new data */
    offset[0] = start + nrecords;
    count[0]  = read_nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    if(H5Dwrite(did, mem_type_id, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(tmp_buf)
        HDfree(tmp_buf);
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(mem_type_id > 0)
        if(H5Tclose(mem_type_id) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBinsert_record() */

/*-------------------------------------------------------------------------
* Function: H5TBadd_records_from
*
* Purpose: Add records from first table to second table
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: December 5, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBadd_records_from(hid_t loc_id,
                            const char *dset_name1,
                            hsize_t start1,
                            hsize_t nrecords,
                            const char *dset_name2,
                            hsize_t start2)
{
    hid_t    did = H5I_BADID;
    hid_t    tid = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    hsize_t  nfields;
    hsize_t  ntotal_records;
    size_t   type_size1;
    size_t   src_size;
    size_t  *src_offset = NULL;
    size_t  *src_sizes = NULL;
    unsigned char *tmp_buf = NULL;
    herr_t   ret_val = -1;

    /*-------------------------------------------------------------------------
    * first we get information about type size and offsets on disk
    *-------------------------------------------------------------------------
    */

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name1, &nfields, &ntotal_records) < 0)
        goto out;

    if(NULL == (src_offset = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
        goto out;
    if(NULL == (src_sizes  = (size_t *)malloc((size_t)nfields * sizeof(size_t))))
        goto out;

    /* get field info */
    if(H5TBget_field_info(loc_id, dset_name1, NULL, src_sizes, src_offset, &src_size) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * Get information about the first table and read it
    *-------------------------------------------------------------------------
    */

    /* open the 1st dataset. */
    if((did = H5Dopen2(loc_id, dset_name1, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    /* get the dataspace handle */
    if((sid = H5Dget_space(did)) < 0)
        goto out;

    /* get the size of the datatype */
    if(0 == (type_size1 = H5Tget_size(tid)))
        goto out;

    if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size1)))
        goto out;

    /* define a hyperslab in the dataset of the size of the records */
    offset[0] = start1;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    if(H5Dread(did, tid, m_sid, sid, H5P_DEFAULT, tmp_buf) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * add to the second table
    *-------------------------------------------------------------------------
    */
    if(H5TBinsert_record(loc_id, dset_name2, start2, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(tmp_buf)
        free(tmp_buf);
    if(src_offset)
        free(src_offset);
    if(src_sizes)
        free(src_sizes);
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBadd_records_from() */

/*-------------------------------------------------------------------------
* Function: H5TBcombine_tables
*
* Purpose: Combine records from two tables into a third
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: December 10, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBcombine_tables(hid_t loc_id1,
                          const char *dset_name1,
                          hid_t loc_id2,
                          const char *dset_name2,
                          const char *dset_name3)
{
    /* identifiers for the 1st dataset. */
    hid_t    did_1 = H5I_BADID;
    hid_t    tid_1 = H5I_BADID;
    hid_t    sid_1 = H5I_BADID;
    hid_t    pid_1 = H5I_BADID;
    /* identifiers for the 2nd dataset. */
    hid_t    did_2 = H5I_BADID;
    hid_t    tid_2 = H5I_BADID;
    hid_t    sid_2 = H5I_BADID;
    hid_t    pid_2 = H5I_BADID;
    /* identifiers for the 3rd dataset. */
    hid_t    did_3 = H5I_BADID;
    hid_t    tid_3 = H5I_BADID;
    hid_t    sid_3 = H5I_BADID;
    hid_t    pid_3 = H5I_BADID;
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hid_t    member_type_id = H5I_BADID;
    hid_t    attr_id = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    hsize_t  nfields;
    hsize_t  nrecords;
    hsize_t  dims[1];
    hsize_t  maxdims[1] = {H5S_UNLIMITED};
    hsize_t  i;
    size_t   type_size;
    size_t   member_offset;
    size_t   src_size;
    size_t  *src_offset = NULL;
    size_t  *src_sizes = NULL;
    char     attr_name[255];
    unsigned char *tmp_buf = NULL;
    unsigned char *tmp_fill_buf = NULL;
    htri_t   has_fill;
    herr_t   ret_val = -1;

    /*-------------------------------------------------------------------------
    * first we get information about type size and offsets on disk
    *-------------------------------------------------------------------------
    */

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id1, dset_name1, &nfields, &nrecords) < 0)
        goto out;

    if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
        goto out;
    if(NULL == (src_sizes  = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
        goto out;

    /* get field info */
    if(H5TBget_field_info(loc_id1, dset_name1, NULL, src_sizes, src_offset, &src_size) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * get information about the first table
    *-------------------------------------------------------------------------
    */

    /* open the 1st dataset. */
    if((did_1 = H5Dopen2(loc_id1, dset_name1, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid_1 = H5Dget_type(did_1)) < 0)
        goto out;

    /* get the dataspace handle */
    if((sid_1 = H5Dget_space(did_1)) < 0)
        goto out;

    /* get creation properties list */
    if((pid_1 = H5Dget_create_plist(did_1)) < 0)
        goto out;

    /* get the dimensions  */
    if(H5TBget_table_info(loc_id1, dset_name1, &nfields, &nrecords) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * make the merged table with no data originally
    *-------------------------------------------------------------------------
    */

    /* clone the property list */
    if((pid_3 = H5Pcopy(pid_1)) < 0)
        goto out;

    /* clone the type id */
    if((tid_3 = H5Tcopy(tid_1)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * here we do not clone the file space from the 1st dataset, because we want to create
    * an empty table. Instead we create a new dataspace with zero records and expandable.
    *-------------------------------------------------------------------------
    */
    dims[0] = 0;

    /* create a simple data space with unlimited size */
    if((sid_3 = H5Screate_simple(1, dims, maxdims)) < 0)
        goto out;

    /* create the dataset */
    if((did_3 = H5Dcreate2(loc_id1, dset_name3, tid_3, sid_3, H5P_DEFAULT, pid_3, H5P_DEFAULT)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * attach the conforming table attributes
    *-------------------------------------------------------------------------
    */
    if(H5TB_attach_attributes("Merge table", loc_id1, dset_name3, nfields, tid_3) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * get attributes
    *-------------------------------------------------------------------------
    */
    if(0 == (type_size = H5Tget_size(tid_3)))
        goto out;

    /* alloc fill value attribute buffer */
    if(NULL == (tmp_fill_buf = (unsigned char *)HDmalloc(type_size)))
        goto out;

    /* get the fill value attributes */
    if((has_fill = H5TBAget_fill(loc_id1, dset_name1, did_1, tmp_fill_buf)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * attach the fill attributes from previous table
    *-------------------------------------------------------------------------
    */
    if(has_fill) {
        if((sid = H5Screate(H5S_SCALAR)) < 0)
            goto out;

        for(i = 0; i < nfields; i++) {
            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0)
                goto out;

            /* get the member offset */
            member_offset = H5Tget_member_offset(tid_3, (unsigned)i);

            HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i);

            if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
                goto out;

            if(H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0)
                goto out;

            if(H5Aclose(attr_id) < 0)
                goto out;
            attr_id = H5I_BADID;

            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;
        } /* end for */

        /* close data space. */
        if(H5Sclose(sid) < 0)
            goto out;
        sid = H5I_BADID;
    } /* end if */

    /*-------------------------------------------------------------------------
    * read data from 1st table
    *-------------------------------------------------------------------------
    */
    if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size)))
        goto out;

    /* define a hyperslab in the dataset of the size of the records */
    offset[0] = 0;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid_1, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    if(H5Dread(did_1, tid_1, m_sid, sid_1, H5P_DEFAULT, tmp_buf) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * save data from 1st table into new table
    *-------------------------------------------------------------------------
    */

    /* append the records to the new table */
    if(H5TBappend_records(loc_id1, dset_name3, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * release temporary resources
    *-------------------------------------------------------------------------
    */
    if(H5Sclose(m_sid) < 0)
        goto out;
    m_sid = H5I_BADID;
    free(tmp_buf);
    tmp_buf = NULL;

    /*-------------------------------------------------------------------------
    * get information about the 2nd table
    *-------------------------------------------------------------------------
    */

    /* open the dataset. */
    if((did_2 = H5Dopen2(loc_id2, dset_name2, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid_2 = H5Dget_type(did_2)) < 0)
        goto out;

    /* get the dataspace handle */
    if((sid_2 = H5Dget_space(did_2)) < 0)
        goto out;

    /* get the property list handle */
    if((pid_2 = H5Dget_create_plist(did_2)) < 0)
        goto out;

    /* get the dimensions  */
    if(H5TBget_table_info(loc_id2, dset_name2, &nfields, &nrecords) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * read data from 2nd table
    *-------------------------------------------------------------------------
    */

    if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, type_size)))
        goto out;

    /* define a hyperslab in the dataset of the size of the records */
    offset[0] = 0;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid_2, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    if(H5Dread(did_2, tid_2, m_sid, sid_2, H5P_DEFAULT, tmp_buf) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * save data from 2nd table into new table
    *-------------------------------------------------------------------------
    */

    /* append the records to the new table */
    if(H5TBappend_records(loc_id1, dset_name3, nrecords, src_size, src_offset, src_sizes, tmp_buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(tmp_buf)
        free(tmp_buf);
    if(tmp_fill_buf)
        free(tmp_fill_buf);
    if(src_offset)
        free(src_offset);
    if(src_sizes)
        free(src_sizes);
    if(member_type_id > 0)
        if(H5Tclose(member_type_id) < 0)
            ret_val = -1;
    if(attr_id > 0)
        if(H5Aclose(attr_id) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid_1 > 0)
        if(H5Sclose(sid_1) < 0)
            ret_val = -1;
    if(tid_1 > 0)
        if(H5Tclose(tid_1) < 0)
            ret_val = -1;
    if(pid_1 > 0)
        if(H5Pclose(pid_1) < 0)
            ret_val = -1;
    if(did_1 > 0)
        if(H5Dclose(did_1) < 0)
            ret_val = -1;
    if(sid_2 > 0)
        if(H5Sclose(sid_2) < 0)
            ret_val = -1;
    if(tid_2 > 0)
        if(H5Tclose(tid_2) < 0)
            ret_val = -1;
    if(pid_2 > 0)
        if(H5Pclose(pid_2) < 0)
            ret_val = -1;
    if(did_2 > 0)
        if(H5Dclose(did_2) < 0)
            ret_val = -1;
    if(sid_3 > 0)
        if(H5Sclose(sid_3) < 0)
            ret_val = -1;
    if(tid_3 > 0)
        if(H5Tclose(tid_3) < 0)
            ret_val = -1;
    if(pid_3 > 0)
        if(H5Pclose(pid_3) < 0)
            ret_val = -1;
    if(did_3 > 0)
        if(H5Dclose(did_3) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBcombine_tables() */

/*-------------------------------------------------------------------------
* Function: H5TBinsert_field
*
* Purpose: Inserts a field
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: January 30, 2002
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBinsert_field(hid_t loc_id,
                        const char *dset_name,
                        const char *field_name,
                        hid_t field_type,
                        hsize_t position,
                        const void *fill_data,
                        const void *buf)
{
    /* identifiers for the 1st, original dataset */
    hid_t    did_1 = H5I_BADID;
    hid_t    tid_1 = H5I_BADID;
    hid_t    sid_1 = H5I_BADID;
    hid_t    pid_1 = H5I_BADID;
    hid_t    msid_1 = H5I_BADID;
    /* identifiers for the 2nd, new dataset */
    hid_t    did_2 = H5I_BADID;
    hid_t    tid_2 = H5I_BADID;
    hid_t    sid_2 = H5I_BADID;
    hid_t    pid_2 = H5I_BADID;
    hid_t    msid_2 = H5I_BADID;
    /* identifiers for the 3rd, final dataset */
    hid_t    did_3 = H5I_BADID;
    hid_t    tid_3 = H5I_BADID;
    hid_t    sid_3 = H5I_BADID;
    hid_t    member_type_id = H5I_BADID;
    hid_t    write_type_id = H5I_BADID;
    hid_t    preserve_id = H5I_BADID;
    hid_t    attr_id = H5I_BADID;
    size_t   member_size;
    size_t   new_member_size = 0;
    size_t   total_size;
    size_t   curr_offset;
    hsize_t  nfields;
    hsize_t  nrecords;
    hsize_t  dims_chunk[1];
    hsize_t  dims[1];
    hsize_t  maxdims[1] = { H5S_UNLIMITED };
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    hsize_t  i;
    char     table_title[255];
    char     attr_name[255];
    char    *member_name = NULL;
    unsigned char *tmp_buf = NULL;
    unsigned char *tmp_fill_buf = NULL;
    hbool_t  inserted;
    herr_t   ret_val = -1;

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * get information about the old data type
     *-------------------------------------------------------------------------
     */

    /* open the dataset. */
    if((did_1 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get creation properties list */
    if((pid_1 = H5Dget_create_plist(did_1)) < 0)
        goto out;

    /* get the datatype */
    if((tid_1 = H5Dget_type(did_1)) < 0)
        goto out;

    /* get the size of the datatype */
    if(0 == (total_size = H5Tget_size(tid_1)))
        goto out;

    /* get the dataspace handle */
    if((sid_1 = H5Dget_space(did_1)) < 0)
        goto out;

    /* get dimension */
    if(H5Sget_simple_extent_dims(sid_1, dims, NULL) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * get attributes
     *-------------------------------------------------------------------------
     */

    /* get the table title */
    if((H5TBAget_title(did_1, table_title)) < 0)
        goto out;

    /* alloc fill value attribute buffer */
    if(NULL == (tmp_fill_buf = (unsigned char *)HDmalloc(total_size)))
        goto out;

    /* get the fill value attributes */
    if((H5TBAget_fill(loc_id, dset_name, did_1, tmp_fill_buf)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * create a new data type
     *-------------------------------------------------------------------------
     */

    /* get the new member size */
    if(0 == (member_size = H5Tget_size(field_type)))
        goto out;

    /* create the data type. */
    if((tid_2 = H5Tcreate(H5T_COMPOUND, (size_t)(total_size + member_size))) < 0)
        goto out;

    curr_offset = 0;
    inserted    = FALSE;

    /* insert the old fields, counting with the new one */
    for(i = 0; i < nfields + 1; i++) {
        hsize_t  idx;

        idx = i;
        if(inserted)
            idx = i - 1;

        if(i == position) {
            /* get the new member size */
            if(0 == (new_member_size = H5Tget_size(field_type)))
                goto out;

            /* insert the new field type */
            if(H5Tinsert(tid_2, field_name, curr_offset, field_type) < 0)
                goto out;

            curr_offset += new_member_size;

            inserted = TRUE;
        } /* end if */
        else {
            /* get the member name */
            if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)idx)))
                goto out;

            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid_1, (unsigned)idx)) < 0)
                goto out;

            /* get the member size */
            if(0 == (member_size = H5Tget_size(member_type_id)))
                goto out;

            /* insert it into the new type */
            if(H5Tinsert(tid_2, member_name, curr_offset, member_type_id) < 0)
                goto out;

            curr_offset += member_size;

            H5free_memory(member_name);
            member_name = NULL;

            /* close the member type */
            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;
        } /* end else */
    } /* end for */

    /*-------------------------------------------------------------------------
     * create a new temporary dataset
     *-------------------------------------------------------------------------
     */

    /* retrieve the size of chunk */
    if(H5Pget_chunk(pid_1, 1, dims_chunk) < 0)
        goto out;

    /* create a new simple data space with unlimited size, using the dimension */
    if((sid_2 = H5Screate_simple(1, dims, maxdims)) < 0)
        goto out;

    /* modify dataset creation properties, i.e. enable chunking  */
    if((pid_2 = H5Pcreate(H5P_DATASET_CREATE)) < 0)
        goto out;
    if(H5Pset_chunk(pid_2, 1, dims_chunk) < 0)
        goto out;

    /* create the dataset. */
    if((did_2 = H5Dcreate2(loc_id, "new", tid_2, sid_2, H5P_DEFAULT, pid_2, H5P_DEFAULT)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * read data from 1st table
     *-------------------------------------------------------------------------
     */

    if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, (size_t)total_size)))
        goto out;

    /* define a hyperslab in the dataset of the size of the records */
    offset[0] = 0;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid_1, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((msid_1 = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;

    if(H5Dread(did_1, tid_1, msid_1, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * save data from 1st table into new table, using the 1st type id
     *-------------------------------------------------------------------------
     */

    /* write */
    if(H5Dwrite(did_2, tid_1, msid_1, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * save the function supplied data of the new field
     *-------------------------------------------------------------------------
     */

    /* create a write id */
    if((write_type_id = H5Tcreate(H5T_COMPOUND, (size_t)new_member_size)) < 0)
        goto out;

    /* the field in the file is found by its name */
    if(H5Tinsert(write_type_id, field_name, (size_t)0, field_type) < 0)
        goto out;

    /* create xfer properties to preserve initialized data */
    if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
        goto out;
    if(H5Pset_preserve(preserve_id, 1) < 0)
        goto out;

    /* only write if there is something to write */
    if(buf) {
        /* create a memory dataspace handle */
        if((msid_2 = H5Screate_simple(1, mem_size, NULL)) < 0)
            goto out;

        /* write */
        if(H5Dwrite(did_2, write_type_id, msid_2, sid_2, preserve_id, buf) < 0)
            goto out;
    } /* end if */

    /*-------------------------------------------------------------------------
     * delete 1st table
     *-------------------------------------------------------------------------
     */
    if(H5Ldelete(loc_id, dset_name, H5P_DEFAULT) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * rename 2nd table
     *-------------------------------------------------------------------------
     */
    if(H5Lmove(loc_id, "new", H5L_SAME_LOC, dset_name, H5P_DEFAULT, H5P_DEFAULT) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * attach the conforming table attributes
     *-------------------------------------------------------------------------
     */

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0)
        goto out;

    /* open the dataset. */
    if((did_3 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid_3 = H5Dget_type(did_3)) < 0)
        goto out;

    /* set the attributes */
    if(H5TB_attach_attributes(table_title, loc_id, dset_name, (hsize_t)nfields, tid_3) < 0)
        goto out;

    /*-------------------------------------------------------------------------
     * attach the fill attributes from previous table
     *-------------------------------------------------------------------------
     */
    if((sid_3 = H5Screate(H5S_SCALAR)) < 0)
        goto out;

    for(i = 0; i < (nfields - 1); i++) {
        size_t   member_offset;

        /* get the member type */
        if((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0)
            goto out;

        /* get the member offset */
        member_offset = H5Tget_member_offset(tid_3, (unsigned)i);

        HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i);

        if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_3, H5P_DEFAULT, H5P_DEFAULT)) < 0)
            goto out;

        if(H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0)
            goto out;

        if(H5Aclose(attr_id) < 0)
            goto out;
        attr_id = H5I_BADID;

        /* close the member type */
        if(H5Tclose(member_type_id) < 0)
            goto out;
        member_type_id = H5I_BADID;
    } /* end for */

    /*-------------------------------------------------------------------------
     * attach the fill attribute from the new field, if present
     *-------------------------------------------------------------------------
     */
    if(fill_data) {
        HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)(nfields - 1));

        /* get the member type */
        if((member_type_id = H5Tget_member_type(tid_3, (unsigned)nfields - 1)) < 0)
            goto out;

        if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_3, H5P_DEFAULT, H5P_DEFAULT)) < 0)
            goto out;

        if(H5Awrite(attr_id, member_type_id, fill_data) < 0)
            goto out;

        if(H5Aclose(attr_id) < 0)
            goto out;
        attr_id = H5I_BADID;

        if(H5Tclose(member_type_id) < 0)
            goto out;
        member_type_id = H5I_BADID;
    } /* end fill_data */

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(tmp_buf)
        HDfree(tmp_buf);
    if(tmp_fill_buf)
        HDfree(tmp_fill_buf);
    if(preserve_id > 0)
        if(H5Pclose(preserve_id) < 0)
            ret_val = -1;
    if(msid_1 > 0)
        if(H5Sclose(msid_1) < 0)
            ret_val = -1;
    if(tid_1 > 0)
        if(H5Tclose(tid_1) < 0)
            ret_val = -1;
    if(pid_1 > 0)
        if(H5Pclose(pid_1) < 0)
            ret_val = -1;
    if(sid_1 > 0)
        if(H5Sclose(sid_1) < 0)
            ret_val = -1;
    if(did_1 > 0)
        if(H5Dclose(did_1) < 0)
            ret_val = -1;
    if(msid_2 > 0)
        if(H5Sclose(msid_2) < 0)
            ret_val = -1;
    if(sid_2 > 0)
        if(H5Sclose(sid_2) < 0)
            ret_val = -1;
    if(tid_2 > 0)
        if(H5Tclose(tid_2) < 0)
            ret_val = -1;
    if(pid_2 > 0)
        if(H5Pclose(pid_2) < 0)
            ret_val = -1;
    if(did_2 > 0)
        if(H5Dclose(did_2) < 0)
            ret_val = -1;
    if(sid_3 > 0)
        if(H5Sclose(sid_3) < 0)
            ret_val = -1;
    if(tid_3 > 0)
        if(H5Tclose(tid_3) < 0)
            ret_val = -1;
    if(did_3 > 0)
        if(H5Dclose(did_3) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBinsert_field() */

/*-------------------------------------------------------------------------
* Function: H5TBdelete_field
*
* Purpose: Deletes a field
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: January 30, 2002
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBdelete_field(hid_t loc_id,
                        const char *dset_name,
                        const char *field_name)
{
    /* identifiers for the 1st original dataset */
    hid_t    did_1 = H5I_BADID;
    hid_t    tid_1 = H5I_BADID;
    hid_t    sid_1 = H5I_BADID;
    hid_t    pid_1 = H5I_BADID;
    /* identifiers for the 2nd new dataset */
    hid_t    did_2 = H5I_BADID;
    hid_t    tid_2 = H5I_BADID;
    hid_t    sid_2 = H5I_BADID;
    hid_t    pid_2 = H5I_BADID;
    /* identifiers for the 3rd final dataset */
    hid_t    did_3 = H5I_BADID;
    hid_t    tid_3 = H5I_BADID;
    hid_t    member_type_id = H5I_BADID;
    hid_t    preserve_id = H5I_BADID;
    hid_t    read_type_id = H5I_BADID;
    hid_t    write_type_id = H5I_BADID;
    hid_t    attr_id = H5I_BADID;
    size_t   member_size;
    size_t   type_size1;
    size_t   type_size2;
    size_t   curr_offset;
    size_t   delete_member_size = 0;
    size_t   member_offset;
    hsize_t  nfields;
    hsize_t  nrecords;
    hsize_t  dims_chunk[1];
    hsize_t  dims[1];
    hsize_t  maxdims[1] = { H5S_UNLIMITED };
    hsize_t  i;
    char     attr_name[255];
    char     table_title[255];
    char    *member_name = NULL;
    unsigned char *tmp_buf = NULL;
    unsigned char *tmp_fill_buf = NULL;
    htri_t   has_fill = FALSE;
    herr_t   ret_val = -1;

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * get information about the old data type
    *-------------------------------------------------------------------------
    */

    /* open the dataset. */
    if((did_1 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get creation properties list */
    if((pid_1 = H5Dget_create_plist(did_1)) < 0)
        goto out;

    /* get the datatype */
    if((tid_1 = H5Dget_type(did_1)) < 0)
        goto out;

    /* get the size of the datatype */
    if(0 == (type_size1 = H5Tget_size(tid_1)))
        goto out;

    /* get the dataspace handle */
    if((sid_1 = H5Dget_space(did_1)) < 0)
        goto out;

    /* get dimension */
    if(H5Sget_simple_extent_dims(sid_1, dims, NULL) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * create a new data type; first we find the size of the datatype to delete
    *-------------------------------------------------------------------------
    */

    /* check out the field */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i)))
            goto out;

        /* we want to find the field to delete */
        if(H5TB_find_field(member_name, field_name)) {
            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0)
                goto out;

            /* get the member size */
            if(0 == (delete_member_size = H5Tget_size(member_type_id)))
                goto out;

            /* close the member type */
            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;

            H5free_memory(member_name);
            member_name = NULL;

            break;
        } /* end if */

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /* no field to delete was found */
    if(delete_member_size == 0)
        goto out;

    /*-------------------------------------------------------------------------
    * create a new data type; we now insert all the fields into the new type
    *-------------------------------------------------------------------------
    */

    type_size2 = type_size1 - delete_member_size;

    /* create the data type. */
    if((tid_2 = H5Tcreate (H5T_COMPOUND, type_size2)) < 0)
        goto out;

    curr_offset = 0;

    /* alloc fill value attribute buffer */
    if(NULL == (tmp_fill_buf = (unsigned char *)HDmalloc((size_t)type_size2)))
        goto out;

    /*-------------------------------------------------------------------------
    * get attributes from previous table in the process
    *-------------------------------------------------------------------------
    */

    /* get the table title */
    if((H5TBAget_title(did_1, table_title)) < 0)
        goto out;

    /* insert the old fields except the one to delete */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i)))
            goto out;

        /* we want to skip the field to delete */
        if(!H5TB_find_field(member_name, field_name)) {
            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0)
                goto out;

            /* get the member size */
            if(0 == (member_size = H5Tget_size(member_type_id)))
                goto out;

            /* insert it into the new type */
            if(H5Tinsert(tid_2, member_name, curr_offset, member_type_id) < 0)
                goto out;

            /*-------------------------------------------------------------------------
            * get the fill value information
            *-------------------------------------------------------------------------
            */

            HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i);

            /* check if we have the _FILL attribute */
            if((has_fill = H5LT_find_attribute(did_1, attr_name)) < 0)
                goto out;

            /* get it */
            if(has_fill)
                if(H5LT_get_attribute_disk(did_1, attr_name, tmp_fill_buf + curr_offset) < 0)
                    goto out;

            curr_offset += member_size;

            /* close the member type */
            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;
        } /* end if */

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /*-------------------------------------------------------------------------
    * create a new temporary dataset
    *-------------------------------------------------------------------------
    */

    /* retrieve the size of chunk */
    if(H5Pget_chunk(pid_1, 1, dims_chunk) < 0)
        goto out;

    /* create a new simple data space with unlimited size, using the dimension */
    if((sid_2 = H5Screate_simple(1, dims, maxdims)) < 0)
        goto out;

    /* modify dataset creation properties, i.e. enable chunking  */
    pid_2 = H5Pcreate(H5P_DATASET_CREATE);
    if(H5Pset_chunk(pid_2, 1, dims_chunk) < 0)
        goto out;

    /* create the dataset. */
    if((did_2 = H5Dcreate2(loc_id, "new", tid_2, sid_2, H5P_DEFAULT, pid_2, H5P_DEFAULT)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * we have to read field by field of the old dataset and save it into the new one
    *-------------------------------------------------------------------------
    */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid_1, (unsigned)i)))
            goto out;

        /* skip the field to delete */
        if(!H5TB_find_field(member_name, field_name) > 0) {
            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid_1, (unsigned)i)) < 0)
                goto out;

            /* get the member size */
            if(0 == (member_size = H5Tget_size(member_type_id)))
                goto out;

            /* create a read id */
            if((read_type_id = H5Tcreate(H5T_COMPOUND, member_size)) < 0)
                goto out;

            /* insert it into the new type */
            if(H5Tinsert(read_type_id, member_name, (size_t)0, member_type_id) < 0)
                goto out;

            if(NULL == (tmp_buf = (unsigned char *)HDcalloc((size_t)nrecords, member_size)))
                goto out;

            /* read */
            if(H5Dread(did_1, read_type_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, tmp_buf) < 0)
                goto out;

            /* create a write id */
            if((write_type_id = H5Tcreate(H5T_COMPOUND, member_size)) < 0)
                goto out;

            /* the field in the file is found by its name */
            if(H5Tinsert(write_type_id, member_name, (size_t)0, member_type_id) < 0)
                goto out;

            /* create xfer properties to preserve initialized data */
            if((preserve_id = H5Pcreate(H5P_DATASET_XFER)) < 0)
                goto out;
            if(H5Pset_preserve(preserve_id, 1) < 0)
                goto out;

            /* write */
            if(H5Dwrite(did_2, write_type_id, H5S_ALL, H5S_ALL, preserve_id, tmp_buf) < 0)
                goto out;

            /* end access to the property list */
            if(H5Pclose(preserve_id) < 0)
                goto out;
            preserve_id = H5I_BADID;

            /* close the member type */
            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;

            /* close the read type */
            if(H5Tclose(read_type_id) < 0)
                goto out;
            read_type_id = H5I_BADID;

            /* close the write type */
            if(H5Tclose(write_type_id) < 0)
                goto out;
            write_type_id = H5I_BADID;

            HDfree(tmp_buf);
            tmp_buf = NULL;
        } /* end if */

        /* release resources. */
        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    /*-------------------------------------------------------------------------
    * delete 1st table
    *-------------------------------------------------------------------------
    */
    if(H5Ldelete(loc_id, dset_name, H5P_DEFAULT) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * rename 2nd table
    *-------------------------------------------------------------------------
    */
    if(H5Lmove(loc_id, "new", H5L_SAME_LOC, dset_name, H5P_DEFAULT, H5P_DEFAULT) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * attach the conforming table attributes
    *-------------------------------------------------------------------------
    */

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0)
        goto out;

    /* open the dataset. */
    if((did_3 = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid_3 = H5Dget_type(did_3)) < 0)
        goto out;

    /* set the attributes */
    if(H5TB_attach_attributes(table_title, loc_id, dset_name, nfields, tid_3) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * attach the fill attributes from previous table
    *-------------------------------------------------------------------------
    */
    if(has_fill) {
        if((sid_1 = H5Screate(H5S_SCALAR)) < 0)
            goto out;

        for(i = 0; i < nfields; i++) {
            /* get the member type */
            if((member_type_id = H5Tget_member_type(tid_3, (unsigned)i)) < 0)
                goto out;

            /* get the member offset */
            member_offset = H5Tget_member_offset(tid_3, (unsigned)i);

            HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i);

            if((attr_id = H5Acreate2(did_3, attr_name, member_type_id, sid_1, H5P_DEFAULT, H5P_DEFAULT)) < 0)
                goto out;

            if(H5Awrite(attr_id, member_type_id, tmp_fill_buf + member_offset) < 0)
                goto out;

            if(H5Aclose(attr_id) < 0)
                goto out;
            attr_id = H5I_BADID;

            /* close the member type */
            if(H5Tclose(member_type_id) < 0)
                goto out;
            member_type_id = H5I_BADID;
        } /* end for */

        /* close data space. */
        if(H5Sclose(sid_1) < 0)
            goto out;
        sid_1 = H5I_BADID;
    } /* end if */

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);
    if(tmp_fill_buf)
        HDfree(tmp_fill_buf);
    if(tmp_buf)
        HDfree(tmp_buf);
    if(attr_id > 0)
        if(H5Aclose(attr_id) < 0)
            ret_val = -1;
    if(preserve_id > 0)
        if(H5Pclose(preserve_id) < 0)
            ret_val = -1;
    if(member_type_id > 0)
        if(H5Tclose(member_type_id) < 0)
            ret_val = -1;
    if(read_type_id > 0)
        if(H5Tclose(read_type_id) < 0)
            ret_val = -1;
    if(write_type_id > 0)
        if(H5Tclose(write_type_id) < 0)
            ret_val = -1;
    if(tid_1 > 0)
        if(H5Tclose(tid_1) < 0)
            ret_val = -1;
    if(pid_1 > 0)
        if(H5Pclose(pid_1) < 0)
            ret_val = -1;
    if(sid_1 > 0)
        if(H5Sclose(sid_1) < 0)
            ret_val = -1;
    if(did_1 > 0)
        if(H5Dclose(did_1) < 0)
            ret_val = -1;
    if(sid_2 > 0)
        if(H5Sclose(sid_2) < 0)
            ret_val = -1;
    if(tid_2 > 0)
        if(H5Tclose(tid_2) < 0)
            ret_val = -1;
    if(pid_2 > 0)
        if(H5Pclose(pid_2) < 0)
            ret_val = -1;
    if(did_2 > 0)
        if(H5Dclose(did_2) < 0)
            ret_val = -1;
    if(tid_3 > 0)
        if(H5Tclose(tid_3) < 0)
            ret_val = -1;
    if(did_3 > 0)
        if(H5Dclose(did_3) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBdelete_field() */

/*-------------------------------------------------------------------------
*
* Table attribute functions
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TBAget_title
*
* Purpose: Read the table title
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: January 30, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBAget_title(hid_t loc_id,
                      char *table_title)
{
    /* Get the TITLE attribute */
    if(H5LT_get_attribute_disk(loc_id, "TITLE", table_title) < 0)
        return -1;

    return 0;
}

/*-------------------------------------------------------------------------
* Function: H5TBAget_fill
*
* Purpose: Read the table attribute fill values
*
* Return: Success: TRUE/FALSE, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: January 30, 2002
*
* Comments:
*
*-------------------------------------------------------------------------
*/
htri_t H5TBAget_fill(hid_t loc_id,
                     const char *dset_name,
                     hid_t dset_id,
                     unsigned char *dst_buf)
{
    hsize_t  nfields;
    hsize_t  nrecords;
    hsize_t  i;
    size_t  *src_offset = NULL;
    char     attr_name[255];
    htri_t   has_fill = FALSE;
    htri_t   ret_val = -1;

    /* get the number of records and fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, &nrecords) < 0)
        goto out;

    if(NULL == (src_offset = (size_t *)HDmalloc((size_t)nfields * sizeof(size_t))))
        goto out;

    /* get field info */
    if(H5TBget_field_info(loc_id, dset_name, NULL, NULL, src_offset, NULL) < 0)
        goto out;

    for(i = 0; i < nfields; i++) {
        HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_FILL", (int)i);

        /* check if we have the _FILL attribute */
        if((has_fill = H5LT_find_attribute(dset_id, attr_name)) < 0)
            goto out;

        /* get it */
        if(has_fill)
            if(H5LT_get_attribute_disk(dset_id, attr_name, dst_buf + src_offset[i]) < 0)
                goto out;
    } /* end for */

    ret_val = has_fill;

out:
    if(src_offset)
        HDfree(src_offset);
    
    return ret_val;
} /* end H5TBAget_fill() */


/*-------------------------------------------------------------------------
*
* Inquiry functions
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TBget_table_info
*
* Purpose: Gets the number of records and fields of a table
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBget_table_info(hid_t loc_id,
                           const char *dset_name,
                           hsize_t *nfields,
                           hsize_t *nrecords)
{
    hid_t      tid = H5I_BADID;
    hid_t      sid = H5I_BADID;
    hid_t      did = H5I_BADID;
    hsize_t    dims[1];
    int        num_members;
    herr_t     ret_val = -1;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    /* get the number of members */
    if((num_members = H5Tget_nmembers(tid)) < 0)
        goto out;

    /*-------------------------------------------------------------------------
    * get number of nfields
    *-------------------------------------------------------------------------
    */
    if(nfields)
        *nfields = (hsize_t)num_members;

    /*-------------------------------------------------------------------------
    * get number of records
    *-------------------------------------------------------------------------
    */
    if(nrecords) {
        /* get the dataspace handle */
        if((sid = H5Dget_space(did)) < 0)
            goto out;

        /* get dimension */
        if(H5Sget_simple_extent_dims(sid, dims, NULL) < 0)
            goto out;

        /* terminate access to the dataspace */
        if(H5Sclose(sid) < 0)
            goto out;
        sid = H5I_BADID;

        *nrecords = dims[0];
    } /* end if */

    ret_val = 0;

out:
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBget_table_info() */

/*-------------------------------------------------------------------------
* Function: H5TBget_field_info
*
* Purpose: Get information about fields
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
herr_t H5TBget_field_info(hid_t loc_id,
                          const char *dset_name,
                          char *field_names[],
                          size_t *field_sizes,
                          size_t *field_offsets,
                          size_t *type_size)
{
    hid_t       did = H5I_BADID;    /* dataset ID */
    hid_t       tid = H5I_BADID;    /* file type ID */
    hid_t       n_tid = H5I_BADID;  /* native type ID */
    hid_t       m_tid = H5I_BADID;  /* member type ID */
    hid_t       nm_tid = H5I_BADID; /* native member ID */
    hssize_t    nfields;
    hssize_t    i;
    herr_t      ret_val = -1;

    /* open the dataset. */
    if((did = H5Dopen2(loc_id, dset_name, H5P_DEFAULT)) < 0)
        goto out;

    /* get the datatype */
    if((tid = H5Dget_type(did)) < 0)
        goto out;

    if((n_tid = H5Tget_native_type(tid, H5T_DIR_DEFAULT)) < 0)
        goto out;

    /* get the type size */
    if(type_size)
        if(0 == (*type_size = H5Tget_size(n_tid)))
            goto out;

    /* get the number of members */
    if((nfields = H5Tget_nmembers(tid)) < 0)
        goto out;

    /* iterate tru the members */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(field_names) {
            char   *member_name;

            if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)i)))
                goto out;
            strcpy(field_names[i], member_name);
            H5free_memory(member_name);
        } /* end if */

        /* get the member type */
        if((m_tid = H5Tget_member_type(tid, (unsigned)i)) < 0)
            goto out;
        if((nm_tid = H5Tget_native_type(m_tid, H5T_DIR_DEFAULT)) < 0)
            goto out;

        /* get the member size */
        if(field_sizes)
            if(0 == (field_sizes[i] = H5Tget_size(nm_tid)))
                goto out;

        /* get the member offset */
        if(field_offsets)
            field_offsets[i] = H5Tget_member_offset(n_tid, (unsigned) i);

        /* close the member types */
        if(H5Tclose(m_tid) < 0)
            goto out;
        m_tid = H5I_BADID;
        if(H5Tclose(nm_tid) < 0)
            goto out;
        nm_tid = H5I_BADID;
    } /* end for */

    ret_val = 0;

out:
    if(tid > 0)
        if(H5Tclose(tid) < 0)
            ret_val = -1;
    if(n_tid > 0)
        if(H5Tclose(n_tid) < 0)
            ret_val = -1;
    if(m_tid > 0)
        if(H5Tclose(m_tid) < 0)
            ret_val = -1;
    if(nm_tid > 0)
        if(H5Tclose(nm_tid) < 0)
            ret_val = -1;
    if(did > 0)
        if(H5Dclose(did) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TBget_field_info() */

/*-------------------------------------------------------------------------
*
* internal functions
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TB_find_field
*
* Purpose: Find a string field
*
* Return: Success: TRUE/FALSE, Failure: N/A
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: November 19, 2001
*
*-------------------------------------------------------------------------
*/
static
hbool_t H5TB_find_field(const char *field, const char *field_list)
{
    const char *start = field_list;
    const char *end;

    while((end = HDstrstr(start, ",")) != 0) {
        ptrdiff_t count = end - start;

        if(HDstrncmp(start, field, (size_t)count) == 0 && (size_t)count == HDstrlen(field))
            return TRUE;
        start = end + 1;
    } /* end while */

    if(HDstrcmp(start, field) == 0)
        return TRUE;

    return FALSE;
} /* end H5TB_find_field() */

/*-------------------------------------------------------------------------
* Function: H5TB_attach_attributes
*
* Purpose: Private function that creates the conforming table attributes;
*          Used by H5TBcombine_tables; not used by H5TBmake_table, which does not read
*          the fill value attributes from an existing table
*
* Return: Success: 0, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: December 6, 2001
*
* Comments:
*
*-------------------------------------------------------------------------
*/
static
herr_t H5TB_attach_attributes(const char *table_title,
                              hid_t loc_id,
                              const char *dset_name,
                              hsize_t nfields,
                              hid_t tid)
{
    char     attr_name[255];
    char    *member_name = NULL;
    hsize_t  i;
    herr_t   ret_val = -1;

    /* attach the CLASS attribute */
    if(H5LTset_attribute_string(loc_id, dset_name, "CLASS", TABLE_CLASS) < 0)
        goto out;

    /* attach the VERSION attribute */
    if(H5LTset_attribute_string(loc_id, dset_name, "VERSION", TABLE_VERSION) < 0)
        goto out;

    /* attach the TITLE attribute */
    if(H5LTset_attribute_string(loc_id, dset_name, "TITLE", table_title) < 0)
        goto out;

    /* attach the FIELD_ name attribute */
    for(i = 0; i < nfields; i++) {
        /* get the member name */
        if(NULL == (member_name = H5Tget_member_name(tid, (unsigned)i)))
            goto out;

        HDsnprintf(attr_name, sizeof(attr_name), "FIELD_%d_NAME", (int)i);

        /* attach the attribute */
        if(H5LTset_attribute_string(loc_id, dset_name, attr_name, member_name) < 0)
            goto out;

        H5free_memory(member_name);
        member_name = NULL;
    } /* end for */

    ret_val = 0;

out:
    if(member_name)
        H5free_memory(member_name);

    return ret_val;
} /* end H5TB_attach_attributes() */

/*-------------------------------------------------------------------------
* Function: H5TB_create_type
*
* Purpose: Private function that creates a memory type ID
*
* Return: Success: the memory type ID, Failure: -1
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
*
* Date: March 31, 2004
*
* Comments:
*
*-------------------------------------------------------------------------
*/
static
hid_t H5TB_create_type(hid_t loc_id,
                       const char *dset_name,
                       size_t type_size,
                       const size_t *field_offset,
                       const size_t *field_sizes,
                       hid_t ftype_id)
{
    hid_t    mem_type_id = H5I_BADID;
    hid_t    mtype_id = H5I_BADID;
    hid_t    nmtype_id = H5I_BADID;
    size_t   size_native;
    hsize_t  nfields = 0;
    char   **fnames = NULL;
    unsigned i;
    herr_t   ret_val = -1;

    /* get the number of fields  */
    if(H5TBget_table_info(loc_id, dset_name, &nfields, NULL) < 0)
        goto out;

    if(NULL == (fnames = (char**)HDcalloc(sizeof(char*), (size_t)nfields)))
        goto out;

    for(i = 0; i < nfields; i++)
        if(NULL == (fnames[i] = (char*)HDmalloc(HLTB_MAX_FIELD_LEN)))
            goto out;

    /* get field info */
    if(H5TBget_field_info(loc_id, dset_name, fnames, NULL, NULL, NULL) < 0)
        goto out;

    /* create the memory data type */
    if ((mem_type_id = H5Tcreate(H5T_COMPOUND, type_size)) < 0)
        goto out;

    /* get each field ID and adjust its size, if necessary */
    for(i = 0; i < nfields; i++) {
        if((mtype_id = H5Tget_member_type(ftype_id, i)) < 0)
            goto out;
        if((nmtype_id = H5Tget_native_type(mtype_id, H5T_DIR_DEFAULT)) < 0)
            goto out;
        if(0 == (size_native = H5Tget_size(nmtype_id)))
            goto out;
        if(field_sizes[i] != size_native)
            if(H5Tset_size(nmtype_id, field_sizes[i]) < 0)
                goto out;
        if(H5Tinsert(mem_type_id, fnames[i], field_offset[i], nmtype_id) < 0)
            goto out;
        if(H5Tclose(mtype_id) < 0)
            goto out;
        mtype_id = H5I_BADID;
        if(H5Tclose(nmtype_id) < 0)
            goto out;
        nmtype_id = H5I_BADID;
    } /* end for */

    ret_val = mem_type_id;

out:
    if(fnames) {
        for(i = 0; i < nfields; i++)
            if(fnames[i])
                HDfree(fnames[i]);
        HDfree(fnames);
    } /* end if */
    if(mtype_id > 0)
        if(H5Tclose(mtype_id) < 0)
            ret_val = -1;
    if(nmtype_id > 0)
        if(H5Tclose(nmtype_id) < 0)
            ret_val = -1;
    if(ret_val < 0 && mem_type_id > 0)
        H5Tclose(mem_type_id);

    return ret_val;
} /* end H5TB_create_type() */

/*-------------------------------------------------------------------------
*
* Functions shared between H5TB and H5PT
*
*-------------------------------------------------------------------------
*/

/*-------------------------------------------------------------------------
* Function: H5TB_common_append_records
*
* Purpose: Common code for reading records shared between H5PT and H5TB
*
* Return: Success: 0, Failure: -1
*
* Programmer: Nat Furrer, nfurrer@ncsa.uiuc.edu
*             James Laird, jlaird@ncsa.uiuc.edu
*
* Date: March 8, 2004
*
* Comments: Called by H5TBappend_records and H5PTappend_records
*
*-------------------------------------------------------------------------
*/
herr_t H5TB_common_append_records(hid_t dataset_id,
                                  hid_t mem_type_id,
                                  size_t nrecords,
                                  hsize_t orig_table_size,
                                  const void *buf)
{
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  dims[1];
    hsize_t  mem_dims[1];
    herr_t   ret_val = -1;

    /* extend the dataset */
    dims[0] = nrecords + orig_table_size;
    if(H5Dset_extent(dataset_id, dims) < 0)
        goto out;

    /* create a simple memory data space */
    mem_dims[0] = nrecords;
    if((m_sid = H5Screate_simple(1, mem_dims, NULL)) < 0)
        goto out;

    /* get a copy of the new file data space for writing */
    if((sid = H5Dget_space(dataset_id)) < 0)
        goto out;

    /* define a hyperslab in the dataset */
    offset[0] = orig_table_size;
    count[0] = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* write the records */
    if(H5Dwrite(dataset_id, mem_type_id, m_sid, sid, H5P_DEFAULT, buf) < 0)
        goto out;

    ret_val = 0;

out:
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TB_common_append_records() */

/*-------------------------------------------------------------------------
* Function: H5TB_common_read_records
*
* Purpose: Common code for reading records shared between H5PT and H5TB
*
* Return: Success: 0, Failure: -1
*
* Programmer: Nat Furrer, nfurrer@ncsa.uiuc.edu
*             James Laird, jlaird@ncsa.uiuc.edu
*
* Date: March 8, 2004
*
* Comments: Called by H5TBread_records and H5PTread_records
*
*-------------------------------------------------------------------------
*/
herr_t H5TB_common_read_records(hid_t dataset_id,
                                hid_t mem_type_id,
                                hsize_t start,
                                size_t nrecords,
                                hsize_t table_size,
                                void *buf)
{
    hid_t    sid = H5I_BADID;
    hid_t    m_sid = H5I_BADID;
    hsize_t  count[1];
    hsize_t  offset[1];
    hsize_t  mem_size[1];
    herr_t   ret_val = -1;

    /* make sure the read request is in bounds */
    if(start + nrecords > table_size)
        goto out;

    /* get the dataspace handle */
    if((sid = H5Dget_space(dataset_id)) < 0)
        goto out;

    /* define a hyperslab in the dataset of the size of the records */
    offset[0] = start;
    count[0]  = nrecords;
    if(H5Sselect_hyperslab(sid, H5S_SELECT_SET, offset, NULL, count, NULL) < 0)
        goto out;

    /* create a memory dataspace handle */
    mem_size[0] = count[0];
    if((m_sid = H5Screate_simple(1, mem_size, NULL)) < 0)
        goto out;
    if((H5Dread(dataset_id, mem_type_id, m_sid, sid, H5P_DEFAULT, buf)) < 0)
        goto out;

    ret_val = 0;

out:
    if(m_sid > 0)
        if(H5Sclose(m_sid) < 0)
            ret_val = -1;
    if(sid > 0)
        if(H5Sclose(sid) < 0)
            ret_val = -1;

    return ret_val;
} /* end H5TB_common_read_records() */