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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* For details of the HDF libraries, see the HDF Documentation at:
* http://hdfdfgroup.org/HDF5/doc/
*
*/
#ifdef __cplusplus
extern "C" {
#endif /* __cplusplus */
#include "hdf5.h"
#include "h5util.h"
#include <jni.h>
#include <stdlib.h>
#include <string.h>
#include "h5aImp.h"
extern JavaVM *jvm;
extern jobject visit_callback;
#ifdef __cplusplus
#define CBENVPTR (cbenv)
#define CBENVPAR
#define JVMPTR (jvm)
#define JVMPAR
#define JVMPAR2
#else
#define CBENVPTR (*cbenv)
#define CBENVPAR cbenv,
#define JVMPTR (*jvm)
#define JVMPAR jvm
#define JVMPAR2 jvm,
#endif
/********************/
/* Local Prototypes */
/********************/
static herr_t H5A_iterate_cb(hid_t g_id, const char *name, const H5A_info_t *info, void *op_data);
/*
* Class: hdf_hdf5lib_H5
* Method: H5Acreate
* Signature: (JLjava/lang/String;JJJ)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Acreate(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong type_id,
jlong space_id, jlong create_plist)
{
hid_t attr_id = -1;
const char *aName;
PIN_JAVA_STRING(name, aName, -1);
attr_id = H5Acreate2((hid_t)loc_id, aName, (hid_t)type_id, (hid_t)space_id, (hid_t)create_plist, (hid_t)H5P_DEFAULT);
UNPIN_JAVA_STRING(name, aName);
if (attr_id < 0)
h5libraryError(env);
return (jlong)attr_id;
} /* end Java_hdf_hdf5lib_H5__1H5Acreate */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aopen_name
* Signature: (JLjava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring name)
{
hid_t attr_id = -1;
const char *aName;
PIN_JAVA_STRING(name, aName, -1);
attr_id = H5Aopen_name((hid_t)loc_id, aName);
UNPIN_JAVA_STRING(name,aName);
if (attr_id < 0)
h5libraryError(env);
return (jlong)attr_id;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aopen_idx
* Signature: (JI)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen_1idx(JNIEnv *env, jclass clss, jlong loc_id, jint idx)
{
hid_t attr_id = H5Aopen_idx((hid_t)loc_id, (unsigned int) idx);
if (attr_id < 0)
h5libraryError(env);
return (jlong)attr_id;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Awrite
* Signature: (JJ[B)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Awrite(JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jbyteArray buf)
{
herr_t status = -1;
jbyte *byteP;
jboolean isCopy;
if (buf == NULL) {
h5nullArgument( env,"H5Awrite: buf is NULL");
} /* end if */
else {
byteP = ENVPTR->GetByteArrayElements(ENVPAR buf, &isCopy);
if (byteP == NULL) {
h5JNIFatalError(env,"H5Awrite: buf is not pinned");
} /* end if */
else {
status = H5Awrite((hid_t)attr_id, (hid_t)mem_type_id, byteP);
/* free the buffer without copying back */
ENVPTR->ReleaseByteArrayElements(ENVPAR buf, byteP, JNI_ABORT);
if (status < 0)
h5libraryError(env);
}
} /* end else */
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Awrite */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aread
* Signature: (JJ[B)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Aread(JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jbyteArray buf)
{
herr_t status = -1;
jbyte *byteP;
jboolean isCopy;
if (buf == NULL) {
h5nullArgument( env,"H5Aread: buf is NULL");
} /* end if */
else {
byteP = ENVPTR->GetByteArrayElements(ENVPAR buf, &isCopy);
if (byteP == NULL) {
h5JNIFatalError( env,"H5Aread: buf is not pinned");
} /* end if */
else {
status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, byteP);
if (status < 0) {
ENVPTR->ReleaseByteArrayElements(ENVPAR buf, byteP, JNI_ABORT);
h5libraryError(env);
} /* end if */
else {
ENVPTR->ReleaseByteArrayElements(ENVPAR buf, byteP, 0);
} /* end else */
} /* end else */
} /* end else */
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Aread */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_space
* Signature: (J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aget_1space(JNIEnv *env, jclass clss, jlong attr_id)
{
hid_t retVal = -1;
retVal = H5Aget_space((hid_t)attr_id);
if (retVal < 0)
h5libraryError(env);
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aget_1space */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_type
* Signature: (J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aget_1type(JNIEnv *env, jclass clss, jlong attr_id)
{
hid_t retVal = -1;
retVal = H5Aget_type((hid_t)attr_id);
if (retVal < 0)
h5libraryError(env);
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aget_1type */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_name
* Signature: (J)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1name(JNIEnv *env, jclass clss, jlong attr_id)
{
char *aName;
jstring str = NULL;
ssize_t buf_size;
/* get the length of the name */
buf_size = H5Aget_name((hid_t)attr_id, NULL, 0);
if (buf_size <= 0) {
h5badArgument(env, "H5Aget_name: buf_size <= 0");
} /* end if */
else {
buf_size++; /* add extra space for the null terminator */
aName = (char*)HDmalloc(sizeof(char) * (size_t)buf_size);
if (aName == NULL) {
h5outOfMemory(env, "H5Aget_name: malloc failed");
} /* end if */
else {
buf_size = H5Aget_name((hid_t)attr_id, (size_t)buf_size, aName);
if (buf_size < 0) {
HDfree(aName);
h5libraryError(env);
} /* end if */
else {
/* save the string; */
str = ENVPTR->NewStringUTF(ENVPAR aName);
HDfree(aName);
} /* end else */
} /* end else */
} /* end else */
return str;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_num_attrs
* Signature: (J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1num_1attrs(JNIEnv *env, jclass clss, jlong loc_id)
{
int retVal = -1;
retVal = H5Aget_num_attrs((hid_t)loc_id);
if (retVal < 0)
h5libraryError(env);
return (jint)retVal;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1num_1attrs */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Adelete
* Signature: (JLjava/lang/String;)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Adelete(JNIEnv *env, jclass clss, jlong loc_id, jstring name)
{
herr_t status = -1;
const char *aName;
PIN_JAVA_STRING(name, aName, -1);
status = H5Adelete((hid_t)loc_id, aName);
UNPIN_JAVA_STRING(name, aName);
if (status < 0)
h5libraryError(env);
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Adelete */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aclose
* Signature: (J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5__1H5Aclose(JNIEnv *env, jclass clss, jlong attr_id)
{
herr_t retVal = -1;
if (attr_id > 0)
retVal = H5Aclose((hid_t)attr_id);
if (retVal < 0)
h5libraryError(env);
return (jint)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aclose */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Acreate2
* Signature: (JLjava/lang/String;JJJJ)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Acreate2(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jlong type_id,
jlong space_id, jlong create_plist, jlong access_plist)
{
hid_t status = -1;
const char *aName;
PIN_JAVA_STRING(name, aName, -1);
status = H5Acreate2((hid_t)loc_id, aName, (hid_t)type_id,
(hid_t)space_id, (hid_t)create_plist, (hid_t)access_plist );
UNPIN_JAVA_STRING(name, aName);
if (status < 0)
h5libraryError(env);
return (jlong)status;
} /* end Java_hdf_hdf5lib_H5__1H5Acreate2 */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Aopen
* Signature: (JLjava/lang/String;J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen(JNIEnv *env, jclass clss, jlong obj_id, jstring name, jlong access_plist)
{
hid_t retVal = -1;
const char *aName;
PIN_JAVA_STRING(name, aName, -1);
retVal = H5Aopen((hid_t)obj_id, aName, (hid_t)access_plist);
UNPIN_JAVA_STRING(name, aName);
if (retVal < 0)
h5libraryError(env);
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Aopen_by_idx
* Signature: (JLjava/lang/String;IIJJJ)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen_1by_1idx(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jint idx_type, jint order, jlong n, jlong aapl_id, jlong lapl_id)
{
hid_t retVal = -1;
const char *aName;
PIN_JAVA_STRING(name, aName, -1);
retVal = H5Aopen_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t)order, (hsize_t)n, (hid_t)aapl_id, (hid_t)lapl_id);
UNPIN_JAVA_STRING(name, aName);
if (retVal < 0)
h5libraryError(env);
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Acreate_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;JJJJJ)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Acreate_1by_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jstring attr_name, jlong type_id, jlong space_id, jlong acpl_id, jlong aapl_id, jlong lapl_id)
{
hid_t retVal = -1;
const char *aName;
const char *attrName;
PIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName, -1);
retVal = H5Acreate_by_name((hid_t)loc_id, aName, attrName, (hid_t)type_id,
(hid_t)space_id, (hid_t)acpl_id, (hid_t)aapl_id, (hid_t)lapl_id);
UNPIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName);
if (retVal < 0)
h5libraryError(env);
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Acreate_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aexists_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;J)Z
*/
JNIEXPORT jboolean JNICALL
Java_hdf_hdf5lib_H5_H5Aexists_1by_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jstring attr_name, jlong lapl_id)
{
htri_t retVal = -1;
const char *aName;
const char *attrName;
PIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName, JNI_FALSE);
retVal = H5Aexists_by_name((hid_t)loc_id, aName, attrName, (hid_t)lapl_id);
UNPIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName);
if (retVal < 0)
h5libraryError(env);
return (jboolean)retVal;
} /* end Java_hdf_hdf5lib_H5_H5Aexists_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Arename
* Signature: (JLjava/lang/String;Ljava/lang/String)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Arename(JNIEnv *env, jclass clss, jlong loc_id, jstring old_attr_name, jstring new_attr_name)
{
herr_t retVal = -1;
const char *oName;
const char *nName;
PIN_JAVA_STRING_TWO(old_attr_name, oName, new_attr_name, nName, -1);
retVal = H5Arename((hid_t)loc_id, oName, nName);
UNPIN_JAVA_STRING_TWO(old_attr_name, oName, new_attr_name, nName);
if (retVal < 0)
h5libraryError(env);
return (jint)retVal;
} /* end Java_hdf_hdf5lib_H5_H5Arename */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Arename_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;Ljava/lang/String;J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Arename_1by_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jstring old_attr_name, jstring new_attr_name, jlong lapl_id)
{
herr_t retVal = -1;
const char *aName;
const char *oName;
const char *nName;
PIN_JAVA_STRING_THREE(obj_name, aName, old_attr_name, oName, new_attr_name, nName, -1);
retVal = H5Arename_by_name((hid_t)loc_id, aName, oName, nName, (hid_t)lapl_id);
UNPIN_JAVA_STRING_THREE(obj_name, aName, old_attr_name, oName, new_attr_name, nName);
if (retVal < 0)
h5libraryError(env);
return (jint)retVal;
} /* end Java_hdf_hdf5lib_H5_H5Arename_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_name_by_idx
* Signature: (JLjava/lang/String;IIJJ)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1name_1by_1idx(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jint idx_type, jint order, jlong n, jlong lapl_id)
{
size_t buf_size;
char *aValue;
jlong status_size;
jstring str = NULL;
const char *aName;
PIN_JAVA_STRING(obj_name, aName, NULL);
/* get the length of the attribute name */
status_size = H5Aget_name_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t) order, (hsize_t) n, (char*)NULL, (size_t)0, (hid_t)lapl_id);
if(status_size < 0) {
UNPIN_JAVA_STRING(obj_name, aName);
h5libraryError(env);
} /* end if */
else {
buf_size = (size_t)status_size + 1;/* add extra space for the null terminator */
aValue = (char*)HDmalloc(sizeof(char) * buf_size);
if (aValue == NULL) {
UNPIN_JAVA_STRING(obj_name, aName);
h5outOfMemory(env, "H5Aget_name_by_idx: malloc failed ");
} /* end if */
else {
status_size = H5Aget_name_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t) order, (hsize_t) n, (char*)aValue, (size_t)buf_size, (hid_t)lapl_id);
UNPIN_JAVA_STRING(obj_name, aName);
if (status_size < 0) {
HDfree(aValue);
h5libraryError(env);
} /* end if */
else {
str = ENVPTR->NewStringUTF(ENVPAR aValue);
HDfree(aValue);
if (str == NULL) {
/* exception -- fatal JNI error */
h5JNIFatalError(env, "H5Aget_name_by_idx: return string not created");
} /* end if */
} /* end else */
} /* end else */
} /* end else */
return str;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1name_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_storage_size
* Signature: (J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1storage_1size(JNIEnv *env, jclass clss, jlong attr_id)
{
hsize_t retVal = (hsize_t)-1;
retVal = H5Aget_storage_size((hid_t)attr_id);
/* probably returns '0' if fails--don't do an exception */
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1storage_1size */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_info
* Signature: (J)Lhdf/hdf5lib/structs/H5A_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1info(JNIEnv *env, jclass clss, jlong attr_id)
{
herr_t status = -1;
H5A_info_t ainfo;
jvalue args[4];
jobject ret_obj = NULL;
status = H5Aget_info((hid_t)attr_id, &ainfo);
if (status < 0) {
h5libraryError(env);
} /* end if */
else {
args[0].z = ainfo.corder_valid;
args[1].j = ainfo.corder;
args[2].i = ainfo.cset;
args[3].j = (jlong)ainfo.data_size;
CALL_CONSTRUCTOR("hdf/hdf5lib/structs/H5A_info_t", "(ZJIJ)V", args);
} /* end else */
return ret_obj;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1info */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_info_by_idx
* Signature: (JLjava/lang/String;IIJJ)Lhdf/hdf5lib/structs/H5A_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1info_1by_1idx(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jint idx_type, jint order, jlong n, jlong lapl_id)
{
herr_t status;
H5A_info_t ainfo;
jvalue args[4];
jobject ret_obj = NULL;
const char *aName;
PIN_JAVA_STRING(obj_name, aName, NULL);
status = H5Aget_info_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type,
(H5_iter_order_t)order, (hsize_t)n, &ainfo, (hid_t)lapl_id);
UNPIN_JAVA_STRING(obj_name, aName);
if (status < 0) {
h5libraryError(env);
} /* end if */
else {
args[0].z = ainfo.corder_valid;
args[1].j = ainfo.corder;
args[2].i = ainfo.cset;
args[3].j = (jlong)ainfo.data_size;
CALL_CONSTRUCTOR("hdf/hdf5lib/structs/H5A_info_t", "(ZJIJ)V", args);
} /* end else */
return ret_obj;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1info_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_info_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;J)Lhdf/hdf5lib/structs/H5A_info_t;
*/
JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Aget_1info_1by_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jstring attr_name, jlong lapl_id)
{
const char *aName;
const char *attrName;
herr_t status;
H5A_info_t ainfo;
jvalue args[4];
jobject ret_obj = NULL;
PIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName, NULL);
status = H5Aget_info_by_name((hid_t)loc_id, aName, attrName, &ainfo, (hid_t)lapl_id);
UNPIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName);
if (status < 0) {
h5libraryError(env);
} /* end if */
else {
args[0].z = ainfo.corder_valid;
args[1].j = ainfo.corder;
args[2].i = ainfo.cset;
args[3].j = (jlong)ainfo.data_size;
CALL_CONSTRUCTOR("hdf/hdf5lib/structs/H5A_info_t", "(ZJIJ)V", args);
} /* end else */
return ret_obj;
} /* end Java_hdf_hdf5lib_H5_H5Aget_1info_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Adelete_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Adelete_1by_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jstring attr_name, jlong lapl_id)
{
herr_t retVal = -1;
const char *aName;
const char *attrName;
PIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName, -1);
retVal = H5Adelete_by_name((hid_t)loc_id, aName, attrName, (hid_t)lapl_id);
UNPIN_JAVA_STRING_TWO(obj_name, aName, attr_name, attrName);
if (retVal < 0)
h5libraryError(env);
return (jint)retVal;
} /* end Java_hdf_hdf5lib_H5_H5Adelete_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aexists
* Signature: (JLjava/lang/String;)Z
*/
JNIEXPORT jboolean JNICALL
Java_hdf_hdf5lib_H5_H5Aexists(JNIEnv *env, jclass clss, jlong obj_id, jstring attr_name)
{
htri_t bval = JNI_FALSE;
const char *aName;
PIN_JAVA_STRING(attr_name, aName, JNI_FALSE);
bval = H5Aexists((hid_t)obj_id, aName);
UNPIN_JAVA_STRING(attr_name, aName);
if (bval > 0)
bval = JNI_TRUE;
else if (bval < 0)
h5libraryError(env);
return (jboolean)bval;
} /* end Java_hdf_hdf5lib_H5_H5Aexists */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Adelete_by_idx
* Signature: (JLjava/lang/String;IIJJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Adelete_1by_1idx(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jint idx_type, jint order, jlong n, jlong lapl_id)
{
herr_t status = -1;
const char *aName;
PIN_JAVA_STRING0(obj_name, aName);
status = H5Adelete_by_idx((hid_t)loc_id, aName, (H5_index_t)idx_type, (H5_iter_order_t)order, (hsize_t)n, (hid_t)lapl_id);
UNPIN_JAVA_STRING(obj_name, aName);
if (status < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Adelete_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
* Method: _H5Aopen_by_name
* Signature: (JLjava/lang/String;Ljava/lang/String;JJ)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen_1by_1name(JNIEnv *env, jclass clss, jlong loc_id, jstring obj_name, jstring attr_name, jlong aapl_id, jlong lapl_id)
{
hid_t status = -1;
const char *aName;
const char *oName;
PIN_JAVA_STRING_TWO(obj_name, oName, attr_name, aName, -1);
status = H5Aopen_by_name((hid_t)loc_id, oName, aName, (hid_t)aapl_id, (hid_t)lapl_id);
UNPIN_JAVA_STRING_TWO(obj_name, oName, attr_name, aName);
if (status < 0)
h5libraryError(env);
return (jlong)status;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen_1by_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aget_create_plist
* Signature: (J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aget_1create_1plist(JNIEnv *env, jclass clss, jlong attr_id)
{
hid_t retVal = -1;
retVal = H5Aget_create_plist((hid_t)attr_id);
if (retVal < 0)
h5libraryError(env);
return (jlong)retVal;
} /* end Java_hdf_hdf5lib_H5__1H5Aget_1create_1plist */
static herr_t
H5A_iterate_cb(hid_t g_id, const char *name, const H5A_info_t *info, void *op_data) {
JNIEnv *cbenv;
jint status = -1;
jclass cls;
jmethodID mid;
jstring str;
jmethodID constructor;
jvalue args[4];
jobject cb_info_t = NULL;
if(JVMPTR->AttachCurrentThread(JVMPAR2 (void**)&cbenv, NULL) == 0) {
cls = CBENVPTR->GetObjectClass(CBENVPAR visit_callback);
if (cls != 0) {
mid = CBENVPTR->GetMethodID(CBENVPAR cls, "callback", "(JLjava/lang/String;Lhdf/hdf5lib/structs/H5A_info_t;Lhdf/hdf5lib/callbacks/H5A_iterate_t;)I");
if (mid != 0) {
str = CBENVPTR->NewStringUTF(CBENVPAR name);
args[0].z = info->corder_valid;
args[1].j = info->corder;
args[2].i = info->cset;
args[3].j = (jlong)info->data_size;
/* get a reference to your class if you don't have it already */
cls = CBENVPTR->FindClass(CBENVPAR "hdf/hdf5lib/structs/H5A_info_t");
if (cls != 0) {
/* get a reference to the constructor; the name is <init> */
constructor = CBENVPTR->GetMethodID(CBENVPAR cls, "<init>", "(ZJIJ)V");
if (constructor != 0) {
cb_info_t = CBENVPTR->NewObjectA(CBENVPAR cls, constructor, args);
status = CBENVPTR->CallIntMethod(CBENVPAR visit_callback, mid, g_id, str, cb_info_t, op_data);
} /* end if (constructor != 0) */
} /* end if (cls != 0) */
} /* end if (mid != 0) */
} /* end if (cls != 0) */
} /* end if */
JVMPTR->DetachCurrentThread(JVMPAR);
return (herr_t)status;
} /* end H5A_iterate_cb */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aiterate
* Signature: (JIIJLjava/lang/Object;Ljava/lang/Object;)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Aiterate(JNIEnv *env, jclass clss, jlong grp_id, jint idx_type, jint order,
jlong idx, jobject callback_op, jobject op_data)
{
hsize_t start_idx = (hsize_t)idx;
herr_t status = -1;
ENVPTR->GetJavaVM(ENVPAR &jvm);
visit_callback = callback_op;
if ((op_data == NULL) || (callback_op == NULL)) {
h5nullArgument(env, "H5Literate_by_name: op_data or callback_op is NULL");
} /* end if */
else {
status = H5Aiterate2((hid_t)grp_id, (H5_index_t)idx_type, (H5_iter_order_t)order, (hsize_t*)&start_idx, (H5A_operator2_t)H5A_iterate_cb, (void*)op_data);
if (status < 0)
h5libraryError(env);
} /* end else */
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Aiterate */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Aiterate_by_name
* Signature: (JLjava/lang/String;IIJLjava/lang/Object;Ljava/lang/Object;J)I
*/
JNIEXPORT jint JNICALL
Java_hdf_hdf5lib_H5_H5Aiterate_1by_1name(JNIEnv *env, jclass clss, jlong grp_id, jstring name, jint idx_type, jint order,
jlong idx, jobject callback_op, jobject op_data, jlong access_id)
{
const char *lName;
hsize_t start_idx = (hsize_t)idx;
herr_t status = -1;
ENVPTR->GetJavaVM(ENVPAR &jvm);
visit_callback = callback_op;
if ((op_data == NULL) || (callback_op == NULL)) {
h5nullArgument(env, "H5Literate_by_name: op_data or callback_op is NULL");
} /* end if */
else {
PIN_JAVA_STRING(name, lName, -1);
status = H5Aiterate_by_name((hid_t)grp_id, lName, (H5_index_t)idx_type, (H5_iter_order_t)order, (hsize_t*)&start_idx, (H5A_operator2_t)H5A_iterate_cb, (void*)op_data, (hid_t)access_id);
UNPIN_JAVA_STRING(name, lName);
if (status < 0)
h5libraryError(env);
} /* end else */
return (jint)status;
} /* end Java_hdf_hdf5lib_H5_H5Aiterate_1by_1name */
#ifdef __cplusplus
} /* end extern "C" */
#endif /* __cplusplus */
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