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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* For details of the HDF libraries, see the HDF Documentation at:
* http://hdfgroup.org/HDF5/doc/
*
*/
#ifdef __cplusplus
extern "C" {
#endif /* __cplusplus */
/*
* This code is the C-interface called by Java programs to access the
* general library functions of the HDF5 library.
*
* Each routine wraps a single HDF entry point, generally with the
* analogous arguments and return codes.
*
* For details of the HDF libraries, see the HDF Documentation at:
* http://www.hdfgroup.org/HDF5/doc/
*
*/
#include <jni.h>
#include <stdlib.h>
#include "hdf5.h"
#include "h5jni.h"
#include "h5eImp.h"
extern JavaVM *jvm;
typedef struct _cb_wrapper {
jobject visit_callback;
jobject op_data;
} cb_wrapper;
#ifdef __cplusplus
#define CBENVPTR (cbenv)
#define CBENVPAR
#define JVMPTR (jvm)
#define JVMPAR
#define JVMPAR2
#else /* __cplusplus */
#define CBENVPTR (*cbenv)
#define CBENVPAR cbenv,
#define JVMPTR (*jvm)
#define JVMPAR jvm
#define JVMPAR2 jvm,
#endif /* __cplusplus */
/********************/
/* Local Prototypes */
/********************/
static herr_t H5E_walk_cb(int nindx, const H5E_error2_t *info, void *cb_data);
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eauto_is_v2
* Signature: (J)Z
*/
JNIEXPORT jboolean JNICALL
Java_hdf_hdf5lib_H5_H5Eauto_1is_1v2
(JNIEnv *env, jclass cls, jlong stk_id)
{
unsigned int is_stack = 0;
if (stk_id < 0) {
h5badArgument(env, "H5Eauto_is_v2: invalid argument");
} /* end if */
else if (H5Eauto_is_v2((hid_t)stk_id, &is_stack) < 0)
h5libraryError(env);
return (jboolean)is_stack;
} /* end Java_hdf_hdf5lib_H5_H5Eauto_1is_1v2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eregister_class
* Signature: (Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Eregister_1class
(JNIEnv *env, jclass cls, jstring cls_name, jstring lib_name, jstring version)
{
hid_t ret_val = -1;
const char* the_cls_name;
const char* the_lib_name;
const char* the_version;
PIN_JAVA_STRING_THREE(cls_name, the_cls_name, lib_name, the_lib_name, version, the_version);
if (the_cls_name != NULL && the_lib_name != NULL && the_version != NULL) {
ret_val = H5Eregister_class(the_cls_name, the_lib_name, the_version);
UNPIN_JAVA_STRING_THREE(cls_name, the_cls_name, lib_name, the_lib_name, version, the_version);
if (ret_val < 0)
h5libraryError(env);
}
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Eregister_1class */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eunregister_class
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eunregister_1class
(JNIEnv *env, jclass cls, jlong cls_id)
{
if (cls_id < 0) {
h5badArgument(env, "H5Eunregister_class: invalid argument");
} /* end if */
else if (H5Eunregister_class((hid_t)cls_id) < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Eunregister_1class */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eclose_msg
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eclose_1msg
(JNIEnv *env, jclass cls, jlong err_id)
{
if (err_id < 0) {
h5badArgument(env, "H5Eclose_msg: invalid argument");
} /* end if */
else if (H5Eclose_msg((hid_t)err_id) < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Eclose_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ecreate_msg
* Signature: (JILjava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Ecreate_1msg
(JNIEnv *env, jclass cls, jlong err_id, jint msg_type, jstring err_msg)
{
hid_t ret_val = -1;
const char *the_err_msg;
H5E_type_t error_msg_type = (H5E_type_t)msg_type;
if (err_id < 0) {
h5badArgument(env, "H5Ecreate_msg: invalid argument");
} /* end if */
else {
PIN_JAVA_STRING(err_msg, the_err_msg);
if (the_err_msg != NULL) {
ret_val = H5Ecreate_msg((hid_t)err_id, error_msg_type, the_err_msg);
UNPIN_JAVA_STRING(err_msg, the_err_msg);
if (ret_val < 0)
h5libraryError(env);
}
} /* end else */
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Ecreate_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ecreate_stack
* Signature: ()J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Ecreate_1stack
(JNIEnv *env, jclass cls)
{
hid_t ret_val = -1;
ret_val = H5Ecreate_stack();
if (ret_val < 0)
h5libraryError(env);
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Ecreate_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_current_stack
* Signature: ()J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1current_1stack
(JNIEnv *env, jclass cls)
{
hid_t ret_val = -1;
ret_val = H5Eget_current_stack();
if (ret_val < 0)
h5libraryError(env);
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1current_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eclose_stack
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eclose_1stack
(JNIEnv *env, jclass cls, jlong stk_id)
{
if (stk_id < 0) {
h5badArgument(env, "H5Eclose_stack: invalid argument");
} /* end if */
else if (H5Eclose_stack((hid_t)stk_id) < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Eclose_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eprint2
* Signature: (JLjava/lang/Object;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eprint2
(JNIEnv *env, jclass cls, jlong stk_id, jobject stream_obj)
{
herr_t ret_val = -1;
if (stk_id < 0) {
h5badArgument(env, "H5Eprint2: invalid argument");
} /* end if */
else {
if(!stream_obj)
ret_val = H5Eprint2((hid_t)stk_id, stdout);
else
ret_val = H5Eprint2((hid_t)stk_id, (FILE*)stream_obj);
if (ret_val < 0)
h5libraryError(env);
} /* end else */
} /* end Java_hdf_hdf5lib_H5_H5Eprint2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_class_name
* Signature: (J)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1class_1name
(JNIEnv *env, jclass cls, jlong cls_id)
{
char *namePtr;
jstring str = NULL;
ssize_t buf_size;
if (cls_id < 0) {
h5badArgument(env, "H5Eget_class_name: invalid argument");
} /* end if */
else {
/* get the length of the name */
buf_size = H5Eget_class_name((hid_t)cls_id, NULL, 0);
if (buf_size < 0) {
h5badArgument( env, "H5Eget_class_name: buf_size < 0");
} /* end if */
else if (buf_size == 0) {
h5badArgument( env, "H5Eget_class_name: No class name");
} /* end else if */
else {
buf_size++; /* add extra space for the null terminator */
namePtr = (char*)HDmalloc(sizeof(char) * (size_t)buf_size);
if (namePtr == NULL) {
h5outOfMemory( env, "H5Eget_class_name: malloc failed");
} /* end if */
else {
buf_size = H5Eget_class_name((hid_t)cls_id, (char *)namePtr, (size_t)buf_size);
if (buf_size < 0) {
HDfree(namePtr);
h5libraryError(env);
} /* end if */
else {
str = ENVPTR->NewStringUTF(ENVPAR namePtr);
HDfree(namePtr);
} /* end else */
} /* end else */
} /* end else */
} /* end else */
return str;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1class_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eset_current_stack
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eset_1current_1stack
(JNIEnv *env, jclass cls, jlong stk_id)
{
if (stk_id < 0) {
h5badArgument(env, "H5Eset_current_stack: invalid argument");
} /* end if */
else if (H5Eset_current_stack((hid_t)stk_id) < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Eset_1current_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Epop
* Signature: (JJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Epop
(JNIEnv *env, jclass cls, jlong stk_id, jlong count)
{
if (stk_id < 0) {
h5badArgument(env, "H5Epop: invalid argument");
} /* end if */
else if (H5Epop((hid_t)stk_id, (size_t)count) < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Epop */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Epush2
* Signature: (JLjava/lang/String;Ljava/lang/String;IJJJLjava/lang/String;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Epush2
(JNIEnv *env, jclass cls, jlong stk_id, jstring filename, jstring funcname,
jint linenumber, jlong class_id, jlong major_id, jlong minor_id, jstring err_desc)
{
herr_t ret_val = -1;
const char* fName;
const char* fncName;
const char* errMsg;
if (stk_id < 0) {
h5badArgument(env, "H5Epush: invalid argument");
} /* end if */
else if (class_id < 0) {
h5badArgument(env, "H5Epush: invalid class_id argument");
} /* end else if */
else if (major_id < 0) {
h5badArgument(env, "H5Epush: invalid major_id argument");
} /* end else if */
else if (minor_id < 0) {
h5badArgument(env, "H5Epush: invalid minor_id argument");
} /* end else if */
else {
PIN_JAVA_STRING_THREE(filename, fName, funcname, fncName, err_desc, errMsg);
if (fName != NULL && fncName != NULL && errMsg != NULL) {
ret_val = H5Epush2((hid_t)stk_id, fName, fncName, (unsigned)linenumber, (hid_t)class_id,
(hid_t)major_id, (hid_t)minor_id, errMsg);
UNPIN_JAVA_STRING_THREE(filename, fName, funcname, fncName, err_desc, errMsg);
if (ret_val < 0)
h5libraryError(env);
}
} /* end else */
} /* end Java_hdf_hdf5lib_H5_H5Epush2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eclear2
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eclear2
(JNIEnv *env, jclass cls, jlong stk_id)
{
if (stk_id < 0) {
h5badArgument(env, "H5Eclear2: invalid argument");
} /* end if */
else if (H5Eclear2((hid_t)stk_id) < 0)
h5libraryError(env);
} /* end Java_hdf_hdf5lib_H5_H5Eclear2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_msg
* Signature: (J[I)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1msg
(JNIEnv *env, jclass cls, jlong msg_id, jintArray error_msg_type_list)
{
char *namePtr;
jstring str = NULL;
jboolean isCopy;
ssize_t buf_size;
jint *theArray;
H5E_type_t error_msg_type;
if (msg_id < 0) {
h5badArgument(env, "H5Eget_msg: invalid argument");
} /* end if */
else if (error_msg_type_list == NULL) {
h5nullArgument(env, "H5Eget_msg: error_msg_type_list is NULL");
} /* end if */
else {
/* get the length of the name */
buf_size = H5Eget_msg((hid_t)msg_id, NULL, NULL, 0);
if ((buf_size < 0) || (buf_size == 0)) {
h5JNIFatalError(env, "H5Eget_msg: Invalid message");
} /* end if */
else {
buf_size++; /* add extra space for the null terminator */
namePtr = (char*)HDmalloc(sizeof(char) * (size_t)buf_size);
if (namePtr == NULL) {
h5outOfMemory(env, "H5Eget_msg: malloc failed");
} /* end if */
else {
theArray = (jint*)ENVPTR->GetIntArrayElements(ENVPAR error_msg_type_list, &isCopy);
if (theArray == NULL) {
HDfree(namePtr);
h5JNIFatalError(env, "H5Eget_msg: error_msg_type_list not pinned");
} /* end if */
else {
buf_size = H5Eget_msg((hid_t)msg_id, &error_msg_type, (char *)namePtr, (size_t)buf_size);
if (buf_size < 0) {
HDfree(namePtr);
ENVPTR->ReleaseIntArrayElements(ENVPAR error_msg_type_list, theArray, JNI_ABORT);
h5libraryError(env);
} /* end if */
else {
theArray[0] = error_msg_type;
ENVPTR->ReleaseIntArrayElements(ENVPAR error_msg_type_list, theArray, 0);
str = ENVPTR->NewStringUTF(ENVPAR namePtr);
HDfree(namePtr);
} /* end else */
} /* end else */
} /* end else */
} /* end else */
} /* end else */
return str;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_num
* Signature: (J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1num
(JNIEnv *env, jclass cls, jlong stk_id)
{
ssize_t ret_val = -1;
if (stk_id < 0) {
h5badArgument(env, "H5Eget_num: invalid argument");
} /* end if */
else {
ret_val = H5Eget_num((hid_t)stk_id);
if (ret_val < 0)
h5libraryError(env);
} /* end else */
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1num */
static herr_t
H5E_walk_cb
(int nindx, const H5E_error2_t *info, void *cb_data)
{
JNIEnv *cbenv;
jint status = -1;
jclass cls;
jmethodID mid;
jstring str1, str2, str3;
jmethodID constructor;
jvalue args[7];
jobject cb_info_t = NULL;
cb_wrapper *wrapper = (cb_wrapper *)cb_data;
void *op_data = (void *)wrapper->op_data;
jobject visit_callback = wrapper->visit_callback;
if(JVMPTR->AttachCurrentThread(JVMPAR2 (void**)&cbenv, NULL) == 0) {
cls = CBENVPTR->GetObjectClass(CBENVPAR visit_callback);
if (cls != 0) {
mid = CBENVPTR->GetMethodID(CBENVPAR cls, "callback", "(ILhdf/hdf5lib/structs/H5E_error2_t;Lhdf/hdf5lib/callbacks/H5E_walk_t;)I");
if (mid != 0) {
args[0].j = info->cls_id;
args[1].j = info->maj_num;
args[2].j = info->min_num;
args[3].i = (jint)info->line;
str1 = CBENVPTR->NewStringUTF(CBENVPAR info->func_name);
args[4].l = str1;
str2 = CBENVPTR->NewStringUTF(CBENVPAR info->file_name);
args[5].l = str2;
str3 = CBENVPTR->NewStringUTF(CBENVPAR info->desc);
args[6].l = str3;
// get a reference to your class if you don't have it already
cls = CBENVPTR->FindClass(CBENVPAR "hdf/hdf5lib/structs/H5E_error2_t");
if (cls != 0) {
// get a reference to the constructor; the name is <init>
constructor = CBENVPTR->GetMethodID(CBENVPAR cls, "<init>", "(JJJILjava/lang/String;Ljava/lang/String;Ljava/lang/String;)V");
if (constructor != 0) {
cb_info_t = CBENVPTR->NewObjectA(CBENVPAR cls, constructor, args);
if (cb_info_t == NULL) {
printf("FATAL ERROR: hdf/hdf5lib/structs/H5E_error2_t: Creation failed\n");
}
else {
status = CBENVPTR->CallIntMethod(CBENVPAR visit_callback, mid, nindx, cb_info_t, op_data);
}
} /* end if (constructor != 0) */
} /* end if(cls != 0) */
} /* end if (mid != 0) */
} /* end if (cls != 0) */
} /* end if */
JVMPTR->DetachCurrentThread(JVMPAR);
return (herr_t)status;
} /* end H5E_walk_cb */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ewalk2
* Signature: (JJLjava/lang/Object;Ljava/lang/Object;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ewalk2
(JNIEnv *env, jclass cls, jlong stk_id, jlong direction, jobject callback_op, jobject op_data)
{
cb_wrapper wrapper = {callback_op, op_data};
ENVPTR->GetJavaVM(ENVPAR &jvm);
if ((op_data == NULL) || (callback_op == NULL)) {
h5nullArgument(env, "H5Ewalk2: op_data or callback_op is NULL");
} /* end if */
else if (H5Ewalk2(stk_id, (H5E_direction_t)direction, (H5E_walk2_t)H5E_walk_cb, (void*)&wrapper) < 0)
h5libraryError(env);
} /* end iJava_hdf_hdf5lib_H5_H5Ewalk2f */
#ifdef __cplusplus
} /* end extern "C" */
#endif /* __cplusplus */
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