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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* For details of the HDF libraries, see the HDF Documentation at:
* http://hdfgroup.org/HDF5/doc/
*
*/
#ifdef __cplusplus
extern "C" {
#endif /* __cplusplus */
/*
* This code is the C-interface called by Java programs to access the
* general library functions of the HDF5 library.
*
* Each routine wraps a single HDF entry point, generally with the
* analogous arguments and return codes.
*
* For details of the HDF libraries, see the HDF Documentation at:
* http://www.hdfgroup.org/HDF5/doc/
*
*/
#include <jni.h>
#include <stdlib.h>
#include "hdf5.h"
#include "h5jni.h"
#include "h5eImp.h"
/*
* Pointer to the JNI's Virtual Machine; used for callback functions.
*/
extern JavaVM *jvm;
typedef struct _cb_wrapper {
jobject visit_callback;
jobject op_data;
} cb_wrapper;
/********************/
/* Local Prototypes */
/********************/
static herr_t H5E_walk_cb(int nindx, const H5E_error2_t *info, void *cb_data);
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eauto_is_v2
* Signature: (J)Z
*/
JNIEXPORT jboolean JNICALL
Java_hdf_hdf5lib_H5_H5Eauto_1is_1v2
(JNIEnv *env, jclass clss, jlong stk_id)
{
unsigned int is_stack = 0;
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eauto_is_v2: invalid stack ID");
if (H5Eauto_is_v2((hid_t)stk_id, &is_stack) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return (jboolean)is_stack;
} /* end Java_hdf_hdf5lib_H5_H5Eauto_1is_1v2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eregister_class
* Signature: (Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Eregister_1class
(JNIEnv *env, jclass clss, jstring cls_name, jstring lib_name, jstring version)
{
const char* the_cls_name = NULL;
const char* the_lib_name = NULL;
const char* the_version = NULL;
hid_t ret_val = H5I_INVALID_HID;
UNUSED(clss);
if (NULL == cls_name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Eregister_class: class name is NULL");
if (NULL == lib_name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Eregister_class: lib name is NULL");
if (NULL == version)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Eregister_class: version string is NULL");
PIN_JAVA_STRING(ENVONLY, cls_name, the_cls_name, NULL, "H5Eregister_class: class name not pinned");
PIN_JAVA_STRING(ENVONLY, lib_name, the_lib_name, NULL, "H5Eregister_class: lib name not pinned");
PIN_JAVA_STRING(ENVONLY, version, the_version, NULL, "H5Eregister_class: version string not pinned");
if ((ret_val = H5Eregister_class(the_cls_name, the_lib_name, the_version)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (the_version)
UNPIN_JAVA_STRING(ENVONLY, version, the_version);
if (the_lib_name)
UNPIN_JAVA_STRING(ENVONLY, lib_name, the_lib_name);
if (the_cls_name)
UNPIN_JAVA_STRING(ENVONLY, cls_name, the_cls_name);
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Eregister_1class */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eunregister_class
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eunregister_1class
(JNIEnv *env, jclass clss, jlong cls_id)
{
UNUSED(clss);
if (cls_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eunregister_class: invalid error class ID");
if (H5Eunregister_class((hid_t)cls_id) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Eunregister_1class */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eclose_msg
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eclose_1msg
(JNIEnv *env, jclass clss, jlong err_id)
{
UNUSED(clss);
if (err_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eclose_msg: invalid error message ID");
if (H5Eclose_msg((hid_t)err_id) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Eclose_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ecreate_msg
* Signature: (JILjava/lang/String;)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Ecreate_1msg
(JNIEnv *env, jclass clss, jlong err_id, jint msg_type, jstring err_msg)
{
H5E_type_t error_msg_type = (H5E_type_t)msg_type;
const char *the_err_msg = NULL;
hid_t ret_val = H5I_INVALID_HID;
UNUSED(clss);
if (err_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Ecreate_msg: invalid error class ID");
if (NULL == err_msg)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ecreate_msg: error message string is NULL");
PIN_JAVA_STRING(ENVONLY, err_msg, the_err_msg, NULL, "H5Ecreate_msg: error message string not pinned");
if ((ret_val = H5Ecreate_msg((hid_t)err_id, error_msg_type, the_err_msg)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (the_err_msg)
UNPIN_JAVA_STRING(ENVONLY, err_msg, the_err_msg);
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Ecreate_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ecreate_stack
* Signature: ()J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Ecreate_1stack
(JNIEnv *env, jclass clss)
{
hid_t ret_val = H5I_INVALID_HID;
UNUSED(clss);
if ((ret_val = H5Ecreate_stack()) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Ecreate_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_current_stack
* Signature: ()J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1current_1stack
(JNIEnv *env, jclass clss)
{
hid_t ret_val = H5I_INVALID_HID;
UNUSED(clss);
if ((ret_val = H5Eget_current_stack()) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1current_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eclose_stack
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eclose_1stack
(JNIEnv *env, jclass clss, jlong stk_id)
{
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eclose_stack: invalid error stack ID");
if (H5Eclose_stack((hid_t)stk_id) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Eclose_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eprint2
* Signature: (JLjava/lang/Object;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eprint2
(JNIEnv *env, jclass clss, jlong stk_id, jobject stream_obj)
{
herr_t ret_val = FAIL;
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eprint2: invalid error stack ID");
if (!stream_obj) {
if ((ret_val = H5Eprint2((hid_t)stk_id, stdout)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
}
else {
if ((ret_val = H5Eprint2((hid_t)stk_id, (FILE *)stream_obj)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
}
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Eprint2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_class_name
* Signature: (J)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1class_1name
(JNIEnv *env, jclass clss, jlong cls_id)
{
jstring str = NULL;
ssize_t buf_size;
char *namePtr = NULL;
UNUSED(clss);
if (cls_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eget_class_name: invalid error class ID");
/* Get the length of the name */
if ((buf_size = H5Eget_class_name((hid_t)cls_id, NULL, 0)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
if (!buf_size)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eget_class_name: no class name");
if (NULL == (namePtr = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
H5_JNI_FATAL_ERROR(ENVONLY, "H5Eget_class_name: malloc failed");
if ((H5Eget_class_name((hid_t)cls_id, (char *)namePtr, (size_t)buf_size + 1)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
namePtr[buf_size] = '\0';
if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, namePtr)))
CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
done:
if (namePtr)
HDfree(namePtr);
return str;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1class_1name */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eset_current_stack
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eset_1current_1stack
(JNIEnv *env, jclass clss, jlong stk_id)
{
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eset_current_stack: invalid error stack ID");
if (H5Eset_current_stack((hid_t)stk_id) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Eset_1current_1stack */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Epop
* Signature: (JJ)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Epop
(JNIEnv *env, jclass clss, jlong stk_id, jlong count)
{
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Epop: invalid error stack ID");
if (H5Epop((hid_t)stk_id, (size_t)count) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Epop */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Epush2
* Signature: (JLjava/lang/String;Ljava/lang/String;IJJJLjava/lang/String;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Epush2
(JNIEnv *env, jclass clss, jlong stk_id, jstring filename, jstring funcname,
jint linenumber, jlong class_id, jlong major_id, jlong minor_id, jstring err_desc)
{
const char *fName = NULL;
const char *fncName = NULL;
const char *errMsg = NULL;
herr_t ret_val = FAIL;
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Epush2: invalid error stack ID");
if (class_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Epush2: invalid error class ID");
if (major_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Epush2: invalid major error class ID");
if (minor_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Epush2: invalid minor error class ID");
if (NULL == filename)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Epush2: filename is NULL");
if (NULL == funcname)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Epush2: function name is NULL");
if (NULL == err_desc)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Epush2: error message is NULL");
PIN_JAVA_STRING(ENVONLY, filename, fName, NULL, "H5Epush2: filename not pinned");
PIN_JAVA_STRING(ENVONLY, funcname, fncName, NULL, "H5Epush2: function name not pinned");
PIN_JAVA_STRING(ENVONLY, err_desc, errMsg, NULL, "H5Epush2: error message not pinned");
if ((ret_val = H5Epush2((hid_t)stk_id, fName, fncName, (unsigned)linenumber, (hid_t)class_id,
(hid_t)major_id, (hid_t)minor_id, errMsg)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
if (errMsg)
UNPIN_JAVA_STRING(ENVONLY, err_desc, errMsg);
if (fncName)
UNPIN_JAVA_STRING(ENVONLY, funcname, fncName);
if (fName)
UNPIN_JAVA_STRING(ENVONLY, filename, fName);
} /* end Java_hdf_hdf5lib_H5_H5Epush2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eclear2
* Signature: (J)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Eclear2
(JNIEnv *env, jclass clss, jlong stk_id)
{
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eclear2: invalid error stack ID");
if (H5Eclear2((hid_t)stk_id) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end Java_hdf_hdf5lib_H5_H5Eclear2 */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_msg
* Signature: (J[I)Ljava/lang/String;
*/
JNIEXPORT jstring JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1msg
(JNIEnv *env, jclass clss, jlong msg_id, jintArray error_msg_type_list)
{
H5E_type_t error_msg_type;
jstring str = NULL;
ssize_t buf_size;
jint *theArray = NULL;
char *namePtr = NULL;
UNUSED(clss);
if (msg_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eget_msg: invalid error message ID");
if (NULL == error_msg_type_list)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Eget_msg: error_msg_type_list is NULL");
/* Get the length of the name */
if ((buf_size = H5Eget_msg((hid_t)msg_id, NULL, NULL, 0)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
if (!buf_size)
H5_JNI_FATAL_ERROR(ENVONLY, "H5Eget_msg: invalid message");
if (NULL == (namePtr = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
H5_JNI_FATAL_ERROR(ENVONLY, "H5Eget_msg: malloc failed");
PIN_INT_ARRAY(ENVONLY, error_msg_type_list, theArray, NULL, "H5Eget_msg: error_msg_type_list not pinned");
if ((H5Eget_msg((hid_t)msg_id, &error_msg_type, (char *)namePtr, (size_t)buf_size + 1)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
namePtr[buf_size] = '\0';
theArray[0] = error_msg_type;
if (NULL == (str = ENVPTR->NewStringUTF(ENVONLY, namePtr)))
CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
done:
if (theArray)
UNPIN_INT_ARRAY(ENVONLY, error_msg_type_list, theArray, 0);
if (namePtr)
HDfree(namePtr);
return str;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1msg */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Eget_num
* Signature: (J)J
*/
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5_H5Eget_1num
(JNIEnv *env, jclass clss, jlong stk_id)
{
ssize_t ret_val = -1;
UNUSED(clss);
if (stk_id < 0)
H5_BAD_ARGUMENT_ERROR(ENVONLY, "H5Eget_num: invalid error stack ID");
if ((ret_val = H5Eget_num((hid_t)stk_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return (jlong)ret_val;
} /* end Java_hdf_hdf5lib_H5_H5Eget_1num */
static herr_t
H5E_walk_cb
(int nindx, const H5E_error2_t *info, void *cb_data)
{
cb_wrapper *wrapper = (cb_wrapper *)cb_data;
jmethodID constructor;
jmethodID mid;
jobject visit_callback = wrapper->visit_callback;
jstring str1, str2, str3;
jobject cb_info_t = NULL;
jvalue args[7];
JNIEnv *cbenv = NULL;
jclass cls;
void *op_data = (void *)wrapper->op_data;
jint status = FAIL;
if (JVMPTR->AttachCurrentThread(JVMPAR, (void **)&cbenv, NULL) < 0) {
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_TRUE);
H5_JNI_FATAL_ERROR(CBENVONLY, "H5E_walk_cb: failed to attach current thread to JVM");
}
if (NULL == (cls = CBENVPTR->GetObjectClass(CBENVONLY, visit_callback)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
if (NULL == (mid = CBENVPTR->GetMethodID(CBENVONLY, cls, "callback", "(ILhdf/hdf5lib/structs/H5E_error2_t;Lhdf/hdf5lib/callbacks/H5E_walk_t;)I")))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
args[0].j = info->cls_id;
args[1].j = info->maj_num;
args[2].j = info->min_num;
args[3].i = (jint)info->line;
if (NULL == (str1 = CBENVPTR->NewStringUTF(CBENVONLY, info->func_name)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
args[4].l = str1;
if (NULL == (str2 = CBENVPTR->NewStringUTF(CBENVONLY, info->file_name)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
args[5].l = str2;
if (NULL == (str3 = CBENVPTR->NewStringUTF(CBENVONLY, info->desc)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
args[6].l = str3;
/* Get a reference to your class if you don't have it already */
if (NULL == (cls = CBENVPTR->FindClass(CBENVONLY, "hdf/hdf5lib/structs/H5E_error2_t")))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
/* get a reference to the constructor; the name is <init> */
if (NULL == (constructor = CBENVPTR->GetMethodID(CBENVONLY, cls, "<init>", "(JJJILjava/lang/String;Ljava/lang/String;Ljava/lang/String;)V")))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
if (NULL == (cb_info_t = CBENVPTR->NewObjectA(CBENVONLY, cls, constructor, args)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
status = CBENVPTR->CallIntMethod(CBENVONLY, visit_callback, mid, nindx, cb_info_t, op_data);
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
done:
if (CBENVONLY)
JVMPTR->DetachCurrentThread(JVMPAR);
return (herr_t)status;
} /* end H5E_walk_cb */
/*
* Class: hdf_hdf5lib_H5
* Method: H5Ewalk2
* Signature: (JJLjava/lang/Object;Ljava/lang/Object;)V
*/
JNIEXPORT void JNICALL
Java_hdf_hdf5lib_H5_H5Ewalk2
(JNIEnv *env, jclass clss, jlong stk_id, jlong direction, jobject callback_op, jobject op_data)
{
cb_wrapper wrapper = { callback_op, op_data };
UNUSED(clss);
ENVPTR->GetJavaVM(ENVONLY, &jvm);
CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
if (NULL == op_data)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ewalk2: op_data is NULL");
if (NULL == callback_op)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ewalk2: callback_op is NULL");
if (H5Ewalk2(stk_id, (H5E_direction_t)direction, (H5E_walk2_t)H5E_walk_cb, (void *)&wrapper) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
return;
} /* end iJava_hdf_hdf5lib_H5_H5Ewalk2f */
#ifdef __cplusplus
} /* end extern "C" */
#endif /* __cplusplus */
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