1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
|
/*
* This file is part of the Pablo Performance Analysis Environment
*
* (R)
* The Pablo Performance Analysis Environment software is NOT in
* the public domain. However, it is freely available without fee for
* education, research, and non-profit purposes. By obtaining copies
* of this and other files that comprise the Pablo Performance Analysis
* Environment, you, the Licensee, agree to abide by the following
* conditions and understandings with respect to the copyrighted software:
*
* 1. The software is copyrighted in the name of the Board of Trustees
* of the University of Illinois (UI), and ownership of the software
* remains with the UI.
*
* 2. Permission to use, copy, and modify this software and its documentation
* for education, research, and non-profit purposes is hereby granted
* to Licensee, provided that the copyright notice, the original author's
* names and unit identification, and this permission notice appear on
* all such copies, and that no charge be made for such copies. Any
* entity desiring permission to incorporate this software into commercial
* products should contact:
*
* Professor Daniel A. Reed reed@cs.uiuc.edu
* University of Illinois
* Department of Computer Science
* 2413 Digital Computer Laboratory
* 1304 West Springfield Avenue
* Urbana, Illinois 61801
* USA
*
* 3. Licensee may not use the name, logo, or any other symbol of the UI
* nor the names of any of its employees nor any adaptation thereof in
* advertizing or publicity pertaining to the software without specific
* prior written approval of the UI.
*
* 4. THE UI MAKES NO REPRESENTATIONS ABOUT THE SUITABILITY OF THE
* SOFTWARE FOR ANY PURPOSE. IT IS PROVIDED "AS IS" WITHOUT EXPRESS
* OR IMPLIED WARRANTY.
*
* 5. The UI shall not be liable for any damages suffered by Licensee from
* the use of this software.
*
* 6. The software was developed under agreements between the UI and the
* Federal Government which entitle the Government to certain rights.
*
**************************************************************************
*
* Developed by: The Pablo Research Group
* University of Illinois at Urbana-Champaign
* Department of Computer Science
* 1304 W. Springfield Avenue
* Urbana, IL 61801
*
* http://www-pablo.cs.uiuc.edu
*
* Send comments to: pablo-feedback@guitar.cs.uiuc.edu
*
* Copyright (c) 1991-1996
* The University of Illinois Board of Trustees.
* All Rights Reserved.
*
* PABLO is a registered trademark of
* The Board of Trustees of the University of Illinois
* registered in the U.S. Patent and Trademark Office.
*
* Author: Ruth A. Aydt (aydt@cs.uiuc.edu)
* Author: Tara M. Madhyastha (tara@cs.uiuc.edu)
*
* Project Manager and Principal Investigator:
* Daniel A. Reed (reed@cs.uiuc.edu)
*
* Funded in part by National Science Foundation grants NSF CCR87-06653
* and NSF CDA87-22836 (Tapestry), DARPA contracts DABT63-91-K-0004,
* DABT63-93-C-0040, DABT63-94-C-0049 (SIO), and F30602-96-C-0161, NASA
* contracts NAG-1-613 (ICLASS), USRA 5555-22, and NGT-51023, and a
* collaborative research agreement with the Intel Supercomputer
* Systems Division
*/
/*
* HDFIOTrace.h: This header file can be included in c source files to
* automatically redefine the I/O function calls to the
* tracing versions when "IOTRACE" is defined.
*
* It also contains function declarations for the I/O trace
* routines called from user code and constant values that may
* be needed by the user.
*
*/
#ifndef HDFIOTrace_h
#define HDFIOTrace_h
/************************************************************************/
/* These defines and the external variable OUTPUT_SWITCH are used in */
/* for HDF and MPI-IO tracing to govern the type of output produced. */
/************************************************************************/
extern int OUTPUT_SWITCH; /* default is SDDF records */
#if defined(__STDC__) || defined(__cplusplus)
#define PROTO(x) x
#else
#define PROTO(x) ()
#endif
#ifdef __cplusplus
extern "C" {
#endif
/* #include <stdio.h> */
#include <sys/types.h>
void startHDFtraceEvent (int );
void endHDFtraceEvent (int , int , char *, int );
FILE *HDFtraceFOPEN( const char *filename, const char *type ) ;
#ifndef HDFtrace3OPEN__
int HDFtrace3OPEN( const char *path, int flags, ... ) ;
#endif
int HDFtraceCREAT( const char *path, mode_t mode );
int HDFtraceFFLUSH( FILE *stream ) ;
int HDFtraceFCLOSE( FILE *stream ) ;
int HDFtraceCLOSE( int fd ) ;
ssize_t HDFtraceREAD( int fd, void *buf, size_t nbyte );
size_t HDFtraceFREAD( void *ptr, size_t size, size_t nitems, FILE *stream );
void *HDFtraceMALLOC( size_t );
off_t HDFtraceLSEEK( int fd, off_t offset, int whence ) ;
int HDFtraceFSEEK( FILE *stream, long offset, int whence ) ;
int HDFtraceFSETPOS( FILE *stream, const fpos_t *position ) ;
void HDFtraceREWIND( FILE *stream ) ;
ssize_t HDFtraceWRITE( int fd, const void *buf, size_t nbytes );
size_t HDFtraceFWRITE( const void *, size_t , size_t , FILE * );
int HDFtracePUTS( char *s ) ;
int HDFtraceFPUTC( int c, FILE *stream ) ;
int HDFtraceFPUTS( const char *s, FILE *stream ) ;
#ifdef HDFIOTRACE
/*
* If IOTRACE is defined, then redefine standard I/O routines to tracing
* versions. Also include the appropriate .h files so the function
* declarations from them will be redefined to traced versions.
*/
#ifdef fopen
# undef fopen
#endif
#ifdef open
# undef open
#endif
#ifdef creat
# undef creat
#endif
#ifdef fflush
# undef fflush
#endif
#ifdef fclose
# undef fclose
#endif
#ifdef close
# undef close
#endif
#ifdef read
# undef read
#endif
#ifdef fread
# undef fread
#endif
#ifdef fgetc
# undef fgetc
#endif
#ifdef fgets
# undef fgets
#endif
#ifdef gets
# undef gets
#endif
#ifdef getw
# undef getw
#endif
#ifdef lseek
# undef lseek
#endif
#ifdef fseek
# undef fseek
#endif
#ifdef rewind
# undef rewind
#endif
#ifdef fsetpos
# undef fsetpos
#endif
#ifdef write
# undef write
#endif
#ifdef fwrite
# undef fwrite
#endif
#ifdef fputc
# undef fputc
#endif
#ifdef fputs
# undef fputs
#endif
#ifdef puts
# undef puts
#endif
#ifdef putw
# undef putw
#endif
#ifdef malloc
# undef malloc
#endif
#define fopen (FILE *)HDFtraceFOPEN
#define open HDFtrace3OPEN
#define creat HDFtraceCREAT
#define fflush HDFtraceFFLUSH
#define fclose HDFtraceFCLOSE
#define close HDFtraceCLOSE
#define read HDFtraceREAD
#define fread HDFtraceFREAD
#define fgetc HDFtraceFGETC
#define fgets HDFtraceFGETS
#define gets HDFtraceGETS
#define getw HDFtraceGETW
#define lseek HDFtraceLSEEK
#define fseek HDFtraceFSEEK
#define rewind HDFtraceREWIND
#define fsetpos HDFtraceFSETPOS
#define write HDFtraceWRITE
#define fwrite HDFtraceFWRITE
#define fputc HDFtraceFPUTC
#define fputs HDFtraceFPUTS
#define puts HDFtracePUTS
#define putw HDFtracePUTW
#define malloc HDFtraceMALLOC
#include <stdio.h>
#include <fcntl.h>
/*
* On the iPSC/860 we don't include unistd.h or we get warnings about
* SEEK_* multiply defined.
*/
#ifndef __NX
#include <unistd.h>
#endif
#include <stdio.h>
/*
* Function declarations for routines that can be called from user code.
*/
void enableIOtracing( void );
void disableIOtracing( void );
void enableIOdetail( void );
void disableIOdetail( void );
void enableLifetimeSummaries( void );
void disableLifetimeSummaries( void );
void enableTimeWindowSummaries ( double );
void disableTimeWindowSummaries( void );
void setTimeWindowSize ( double );
void outputTimeWindowSummaries( void );
void enableFileRegionSummaries ( int );
void disableFileRegionSummaries( void );
void setFileRegionSize ( int );
void outputFileRegionSummaries( void );
int HDFtrace2OPEN ( char*, int );
void HDFtraceReadBegin ( int, int, int );
void HDFtraceReadEnd ( int );
void HDFtraceWriteBegin ( int, int, int );
void HDFtraceWriteEnd ( int );
void HDFtraceIOBegin ( int, int );
void HDFtraceIOEnd ( int, double, char * );
#ifdef H5_HAVE_PARALLEL
#include "HDFmpioProtos.h"
#ifdef MPI_File_open
#undef MPI_File_open
#endif
#ifdef MPI_File_close
#undef MPI_File_close
#endif
#ifdef MPI_File_delete
#undef MPI_File_delete
#endif
#ifdef MPI_File_set_size
#undef MPI_File_set_size
#endif
#ifdef MPI_File_preallocate
#undef MPI_File_preallocate
#endif
#ifdef MPI_File_get_size
#undef MPI_File_get_size
#endif
#ifdef MPI_File_get_group
#undef MPI_File_get_group
#endif
#ifdef MPI_File_get_amode
#undef MPI_File_get_amode
#endif
#ifdef MPI_File_set_view
#undef MPI_File_set_view
#endif
#ifdef MPI_File_get_view
#undef MPI_File_get_view
#endif
#ifdef MPI_File_read_at
#undef MPI_File_read_at
#endif
#ifdef MPI_File_read_at_all
#undef MPI_File_read_at_all
#endif
#ifdef MPI_File_write_at
#undef MPI_File_write_at
#endif
#ifdef MPI_File_write_at_all
#undef MPI_File_write_at_all
#endif
#ifdef MPI_File_iread_at
#undef MPI_File_iread_at
#endif
#ifdef MPI_File_iwrite_at
#undef MPI_File_iwrite_at
#endif
#ifdef MPI_File_read
#undef MPI_File_read
#endif
#ifdef MPI_File_read_all
#undef MPI_File_read_all
#endif
#ifdef MPI_File_write
#undef MPI_File_write
#endif
#ifdef MPI_File_write_all
#undef MPI_File_write_all
#endif
#ifdef MPI_File_iread
#undef MPI_File_iread
#endif
#ifdef MPI_File_iwrite
#undef MPI_File_iwrite
#endif
#ifdef MPI_File_seek
#undef MPI_File_seek
#endif
#ifdef MPI_File_get_position
#undef MPI_File_get_position
#endif
#ifdef MPI_File_get_byte_offset
#undef MPI_File_get_byte_offset
#endif
#ifdef MPI_File_get_type_extent
#undef MPI_File_get_type_extent
#endif
#ifdef MPI_File_set_atomicity
#undef MPI_File_set_atomicity
#endif
#ifdef MPI_File_get_atomicity
#undef MPI_File_get_atomicity
#endif
#ifdef MPI_File_sync
#undef MPI_File_sync
#endif
#define MPI_File_open HDF_MPI_File_open
#define MPI_File_close HDF_MPI_File_close
#define MPI_File_delete HDF_MPI_File_delete
#define MPI_File_set_size HDF_MPI_File_set_size
#define MPI_File_preallocate HDF_MPI_File_preallocate
#define MPI_File_get_size HDF_MPI_File_get_size
#define MPI_File_get_group HDF_MPI_File_get_group
#define MPI_File_get_amode HDF_MPI_File_get_amode
#define MPI_File_set_view HDF_MPI_File_set_view
#define MPI_File_get_view HDF_MPI_File_get_view
#define MPI_File_read_at HDF_MPI_File_read_at
#define MPI_File_read_at_all HDF_MPI_File_read_at_all
#define MPI_File_write_at HDF_MPI_File_write_at
#define MPI_File_write_at_all HDF_MPI_File_write_at_all
#define MPI_File_iread_at HDF_MPI_File_iread_at
#define MPI_File_iwrite_at HDF_MPI_File_iwrite_at
#define MPI_File_read HDF_MPI_File_read
#define MPI_File_read_all HDF_MPI_File_read_all
#define MPI_File_write HDF_MPI_File_write
#define MPI_File_write_all HDF_MPI_File_write_all
#define MPI_File_iread HDF_MPI_File_iread
#define MPI_File_iwrite HDF_MPI_File_iwrite
#define MPI_File_seek HDF_MPI_File_seek
#define MPI_File_get_position HDF_MPI_File_get_position
#define MPI_File_get_byte_offset HDF_MPI_File_get_byte_offset
#define MPI_File_get_type_extent HDF_MPI_File_get_type_extent
#define MPI_File_set_atomicity HDF_MPI_File_set_atomicity
#define MPI_File_get_atomicity HDF_MPI_File_get_atomicity
#define MPI_File_sync HDF_MPI_File_sync
#endif /* H5_HAVE_PARALLEL */
#endif /* HDFIOTRACE */
#ifdef __cplusplus
}
#endif
#endif /* HDFIOTRACE conditional */
|
