1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
1263
1264
1265
1266
1267
1268
1269
1270
1271
1272
1273
1274
1275
1276
1277
1278
1279
1280
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
1324
1325
1326
1327
1328
1329
1330
1331
1332
1333
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
1345
1346
1347
1348
1349
1350
1351
1352
1353
1354
1355
1356
1357
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5Adense.c
* Dec 4 2006
* Quincey Koziol <koziol@hdfgroup.org>
*
* Purpose: Routines for operating on "dense" attribute storage
* for an object.
*
*-------------------------------------------------------------------------
*/
/****************/
/* Module Setup */
/****************/
#define H5A_PACKAGE /*suppress error about including H5Apkg */
#define H5O_PACKAGE /*suppress error about including H5Opkg */
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Apkg.h" /* Attributes */
#include "H5Eprivate.h" /* Error handling */
#include "H5MMprivate.h" /* Memory management */
#include "H5Opkg.h" /* Object headers */
#include "H5SMprivate.h" /* Shared object header messages */
/****************/
/* Local Macros */
/****************/
/* v2 B-tree creation macros for 'name' field index */
#define H5A_NAME_BT2_NODE_SIZE 512
#define H5A_NAME_BT2_MERGE_PERC 40
#define H5A_NAME_BT2_SPLIT_PERC 100
/* v2 B-tree creation macros for 'corder' field index */
#define H5A_CORDER_BT2_NODE_SIZE 512
#define H5A_CORDER_BT2_MERGE_PERC 40
#define H5A_CORDER_BT2_SPLIT_PERC 100
/* Size of stack buffer for serialized attributes */
#define H5A_ATTR_BUF_SIZE 128
/******************/
/* Local Typedefs */
/******************/
/*
* Data exchange structure for dense attribute storage. This structure is
* passed through the v2 B-tree layer when modifying the attribute data value.
*/
typedef struct H5A_bt2_od_wrt_t {
/* downward */
H5F_t *f; /* Pointer to file that fractal heap is in */
hid_t dxpl_id; /* DXPL for operation */
H5HF_t *fheap; /* Fractal heap handle to operate on */
H5HF_t *shared_fheap; /* Fractal heap handle for shared messages */
H5A_t *attr; /* Attribute to write */
} H5A_bt2_od_wrt_t;
/*
* Data exchange structure to pass through the v2 B-tree layer for the
* H5B2_iterate function when iterating over densely stored attributes.
*/
typedef struct {
/* downward (internal) */
H5F_t *f; /* Pointer to file that fractal heap is in */
hid_t dxpl_id; /* DXPL for operation */
H5HF_t *fheap; /* Fractal heap handle */
H5HF_t *shared_fheap; /* Fractal heap handle for shared messages */
/* downward (from application) */
hid_t loc_id; /* Object ID for application callback */
unsigned skip; /* Number of attributes to skip */
unsigned count; /* The # of attributes visited */
const H5A_attr_iter_op_t *attr_op; /* Callback for each attribute */
void *op_data; /* Callback data for each attribute */
/* upward */
int op_ret; /* Return value from callback */
} H5A_bt2_ud_it_t;
/*
* Data exchange structure to pass through the fractal heap layer for the
* H5HF_op function when copying an attribute stored in densely stored attributes.
* (or the shared message heap)
*/
typedef struct {
/* downward (internal) */
H5F_t *f; /* Pointer to file that fractal heap is in */
hid_t dxpl_id; /* DXPL for operation */
const H5A_dense_bt2_name_rec_t *record; /* v2 B-tree record for attribute */
/* upward */
H5A_t *attr; /* Copy of attribute */
} H5A_fh_ud_cp_t;
/********************/
/* Package Typedefs */
/********************/
/********************/
/* Local Prototypes */
/********************/
/*********************/
/* Package Variables */
/*********************/
/*****************************/
/* Library Private Variables */
/*****************************/
/*******************/
/* Local Variables */
/*******************/
/* Declare a free list to manage the serialized attribute information */
H5FL_BLK_DEFINE(ser_attr);
/*-------------------------------------------------------------------------
* Function: H5A_dense_create
*
* Purpose: Creates dense attribute storage structures for an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 4 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_create(H5F_t *f, hid_t dxpl_id, H5O_t *oh)
{
H5HF_create_t fheap_cparam; /* Fractal heap creation parameters */
H5HF_t *fheap; /* Fractal heap handle */
size_t bt2_rrec_size; /* v2 B-tree raw record size */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_create, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
/* Set fractal heap creation parameters */
/* XXX: Give some control of these to applications? */
HDmemset(&fheap_cparam, 0, sizeof(fheap_cparam));
fheap_cparam.managed.width = H5O_FHEAP_MAN_WIDTH;
fheap_cparam.managed.start_block_size = H5O_FHEAP_MAN_START_BLOCK_SIZE;
fheap_cparam.managed.max_direct_size = H5O_FHEAP_MAN_MAX_DIRECT_SIZE;
fheap_cparam.managed.max_index = H5O_FHEAP_MAN_MAX_INDEX;
fheap_cparam.managed.start_root_rows = H5O_FHEAP_MAN_START_ROOT_ROWS;
fheap_cparam.checksum_dblocks = H5O_FHEAP_CHECKSUM_DBLOCKS;
fheap_cparam.max_man_size = H5O_FHEAP_MAX_MAN_SIZE;
/* Create fractal heap for storing attributes */
if(NULL == (fheap = H5HF_create(f, dxpl_id, &fheap_cparam)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTINIT, FAIL, "unable to create fractal heap")
/* Retrieve the heap's address in the file */
if(H5HF_get_heap_addr(fheap, &(oh->attr_fheap_addr)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGETSIZE, FAIL, "can't get fractal heap address")
#ifdef QAK
HDfprintf(stderr, "%s: oh->attr_fheap_addr = %a\n", FUNC, oh->attr_fheap_addr);
#endif /* QAK */
#ifndef NDEBUG
{
size_t fheap_id_len; /* Fractal heap ID length */
/* Retrieve the heap's ID length in the file */
if(H5HF_get_id_len(fheap, &fheap_id_len) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGETSIZE, FAIL, "can't get fractal heap ID length")
HDassert(fheap_id_len == H5O_FHEAP_ID_LEN);
#ifdef QAK
HDfprintf(stderr, "%s: fheap_id_len = %Zu\n", FUNC, fheap_id_len);
#endif /* QAK */
}
#endif /* NDEBUG */
/* Close the fractal heap */
if(H5HF_close(fheap, dxpl_id) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
/* Create the name index v2 B-tree */
bt2_rrec_size = 4 + /* Name's hash value */
1 + /* Message flags */
H5O_FHEAP_ID_LEN; /* Fractal heap ID */
if(H5B2_create(f, dxpl_id, H5A_BT2_NAME,
(size_t)H5A_NAME_BT2_NODE_SIZE, bt2_rrec_size,
H5A_NAME_BT2_SPLIT_PERC, H5A_NAME_BT2_MERGE_PERC,
&(oh->name_bt2_addr)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINIT, FAIL, "unable to create v2 B-tree for name index")
#ifdef QAK
HDfprintf(stderr, "%s: oh->name_bt2_addr = %a\n", FUNC, oh->name_bt2_addr);
#endif /* QAK */
/* XXX: fix me */
#ifdef NOT_YET
/* Check if we should create a creation order index v2 B-tree */
if(linfo->index_corder) {
/* Create the creation order index v2 B-tree */
bt2_rrec_size = 8 + /* Creation order value */
H5O_FHEAP_ID_LEN; /* Fractal heap ID */
if(H5B2_create(f, dxpl_id, H5A_BT2_CORDER,
(size_t)H5A_CORDER_BT2_NODE_SIZE, bt2_rrec_size,
H5A_CORDER_BT2_SPLIT_PERC, H5A_CORDER_BT2_MERGE_PERC,
&(linfo->corder_bt2_addr)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINIT, FAIL, "unable to create v2 B-tree for name index")
#ifdef QAK
HDfprintf(stderr, "%s: linfo->corder_bt2_addr = %a\n", FUNC, linfo->corder_bt2_addr);
#endif /* QAK */
} /* end if */
#endif /* NOT_YET */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_create() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_fnd_cb
*
* Purpose: Callback when an attribute is located in an index
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 11 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5A_dense_fnd_cb(const void *_attr, void *_user_attr)
{
const H5A_t *attr = (const H5A_t *)_attr; /* Record from B-tree */
H5A_t **user_attr = (H5A_t **)_user_attr; /* User data from v2 B-tree attribute lookup */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5A_dense_fnd_cb)
/*
* Check arguments.
*/
HDassert(attr);
HDassert(user_attr);
/* Copy attribute information */
if(NULL == (*user_attr = H5A_copy(NULL, attr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTCOPY, H5_ITER_ERROR, "can't copy attribute")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_fnd_cb() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_open
*
* Purpose: Open an attribute in dense storage structures for an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 11 2006
*
*-------------------------------------------------------------------------
*/
H5A_t *
H5A_dense_open(H5F_t *f, hid_t dxpl_id, const H5O_t *oh, const char *name)
{
H5A_bt2_ud_common_t udata; /* User data for v2 B-tree modify */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
H5A_t *ret_value = NULL; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_open, NULL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
HDassert(name);
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, NULL, "unable to open fractal heap")
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, NULL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, NULL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, NULL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Create the "udata" information for v2 B-tree record modify */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.name = name;
udata.name_hash = H5_checksum_lookup3(name, HDstrlen(name), 0);
udata.flags = 0;
udata.corder = -1; /* XXX: None yet */
udata.found_op = H5A_dense_fnd_cb; /* v2 B-tree comparison callback */
udata.found_op_data = &ret_value;
/* Find & copy the attribute in the 'name' index */
if(H5B2_find(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, &udata, NULL, NULL) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_NOTFOUND, NULL, "can't locate attribute in name index")
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, NULL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, NULL, "can't close fractal heap")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_open() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_insert
*
* Purpose: Insert an attribute into dense storage structures for an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 4 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_insert(H5F_t *f, hid_t dxpl_id, const H5O_t *oh, H5A_t *attr)
{
H5A_bt2_ud_ins_t udata; /* User data for v2 B-tree insertion */
H5HF_t *fheap = NULL; /* Fractal heap handle for attributes */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
uint8_t attr_buf[H5A_ATTR_BUF_SIZE]; /* Buffer for serializing message */
void *attr_ptr = NULL; /* Pointer to serialized message */
unsigned mesg_flags = 0; /* Flags for storing message */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_insert, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
HDassert(attr);
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
htri_t shared_mesg; /* Should this message be stored in the Shared Message table? */
/* Check if message is already shared */
if((shared_mesg = H5O_msg_is_shared(H5O_ATTR_ID, attr)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "error determining if message is shared")
else if(shared_mesg > 0)
/* Mark the message as shared */
mesg_flags |= H5O_MSG_FLAG_SHARED;
else {
/* Should this attribute be written as a SOHM? */
if((shared_mesg = H5SM_try_share(f, dxpl_id, H5O_ATTR_ID, attr)) > 0)
/* Mark the message as shared */
mesg_flags |= H5O_MSG_FLAG_SHARED;
else if(shared_mesg < 0)
HGOTO_ERROR(H5E_ATTR, H5E_WRITEERROR, FAIL, "error determining if message should be shared")
} /* end else */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Check for inserting shared attribute */
if(mesg_flags & H5O_MSG_FLAG_SHARED) {
/* Sanity check */
HDassert(attr_sharable);
/* Use heap ID for shared message heap */
udata.id = attr->sh_loc.u.heap_id;
} /* end if */
else {
size_t attr_size; /* Size of serialized attribute in the heap */
/* Find out the size of buffer needed for serialized message */
if((attr_size = H5O_msg_raw_size(f, H5O_ATTR_ID, FALSE, attr)) == 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGETSIZE, FAIL, "can't get message size")
/* Allocate space for serialized message, if necessary */
if(attr_size > sizeof(attr_buf)) {
if(NULL == (attr_ptr = H5FL_BLK_MALLOC(ser_attr, attr_size)))
HGOTO_ERROR(H5E_ATTR, H5E_NOSPACE, FAIL, "memory allocation failed")
} /* end if */
else
attr_ptr = attr_buf;
/* Create serialized form of attribute or shared message */
if(H5O_msg_encode(f, H5O_ATTR_ID, FALSE, (unsigned char *)attr_ptr, attr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTENCODE, FAIL, "can't encode attribute")
/* Insert the serialized attribute into the fractal heap */
/* (sets the heap ID in the user data) */
if(H5HF_insert(fheap, dxpl_id, attr_size, attr_ptr, &udata.id) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINSERT, FAIL, "unable to insert attribute into fractal heap")
} /* end else */
/* Create the callback information for v2 B-tree record insertion */
udata.common.f = f;
udata.common.dxpl_id = dxpl_id;
udata.common.fheap = fheap;
udata.common.shared_fheap = shared_fheap;
udata.common.name = attr->name;
udata.common.name_hash = H5_checksum_lookup3(attr->name, HDstrlen(attr->name), 0);
udata.common.flags = mesg_flags;
udata.common.corder = -1; /* XXX: None yet */
udata.common.found_op = NULL;
udata.common.found_op_data = NULL;
/* udata.id already set */
/* Insert attribute into 'name' tracking v2 B-tree */
if(H5B2_insert(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, &udata) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINSERT, FAIL, "unable to insert record into v2 B-tree")
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(attr_ptr && attr_ptr != attr_buf)
(void)H5FL_BLK_FREE(ser_attr, attr_ptr);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_insert() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_write_bt2_cb
*
* Purpose: v2 B-tree 'modify' callback to update the data for an attribute
*
* Return: Success: 0
* Failure: 1
*
* Programmer: Quincey Koziol
* Tuesday, December 5, 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5A_dense_write_bt2_cb(void *_record, void *_op_data, hbool_t *changed)
{
H5A_dense_bt2_name_rec_t *record = (H5A_dense_bt2_name_rec_t *)_record; /* Record from B-tree */
H5A_bt2_od_wrt_t *op_data = (H5A_bt2_od_wrt_t *)_op_data; /* "op data" from v2 B-tree modify */
uint8_t attr_buf[H5A_ATTR_BUF_SIZE]; /* Buffer for serializing attribute */
void *attr_ptr = NULL; /* Pointer to serialized attribute */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5A_dense_write_bt2_cb)
/*
* Check arguments.
*/
HDassert(record);
HDassert(op_data);
/* Check for modifying shared attribute */
if(record->flags & H5O_MSG_FLAG_SHARED) {
/* Update the shared attribute in the SOHM info */
if(H5O_attr_update_shared(op_data->f, op_data->dxpl_id, op_data->attr, NULL) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTUPDATE, FAIL, "unable to update attribute in shared storage")
/* Update record's heap ID */
record->id = op_data->attr->sh_loc.u.heap_id;
/* Note that the record changed */
*changed = TRUE;
} /* end if */
else {
size_t attr_size; /* Size of serialized attribute in the heap */
/* Find out the size of buffer needed for serialized attribute */
if((attr_size = H5O_msg_raw_size(op_data->f, H5O_ATTR_ID, FALSE, op_data->attr)) == 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGETSIZE, FAIL, "can't get attribute size")
/* Allocate space for serialized attribute, if necessary */
if(attr_size > sizeof(attr_buf)) {
if(NULL == (attr_ptr = H5FL_BLK_MALLOC(ser_attr, attr_size)))
HGOTO_ERROR(H5E_ATTR, H5E_NOSPACE, FAIL, "memory allocation failed")
} /* end if */
else
attr_ptr = attr_buf;
/* Create serialized form of attribute */
if(H5O_msg_encode(op_data->f, H5O_ATTR_ID, FALSE, (unsigned char *)attr_ptr, op_data->attr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTENCODE, FAIL, "can't encode attribute")
/* Sanity check */
#ifndef NDEBUG
{
size_t obj_len; /* Length of existing encoded attribute */
if(H5HF_get_obj_len(op_data->fheap, op_data->dxpl_id, &record->id, &obj_len) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGETSIZE, FAIL, "can't get object size")
HDassert(obj_len == attr_size);
}
#endif /* NDEBUG */
/* Update existing attribute in heap */
/* (might be more efficient as fractal heap 'op' callback, but leave that for later -QAK) */
if(H5HF_write(op_data->fheap, op_data->dxpl_id, &record->id, changed, attr_ptr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTUPDATE, FAIL, "unable to update attribute in heap")
} /* end else */
done:
/* Release resources */
if(attr_ptr && attr_ptr != attr_buf)
(void)H5FL_BLK_FREE(ser_attr, attr_ptr);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_write_bt2_cb() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_write
*
* Purpose: Modify an attribute in dense storage structures for an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 4 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_write(H5F_t *f, hid_t dxpl_id, const H5O_t *oh, H5A_t *attr)
{
H5A_bt2_ud_common_t udata; /* User data for v2 B-tree modify */
H5A_bt2_od_wrt_t op_data; /* "Op data" for v2 B-tree modify */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_write, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
HDassert(attr);
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Create the "udata" information for v2 B-tree record modify */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.name = attr->name;
udata.name_hash = H5_checksum_lookup3(attr->name, HDstrlen(attr->name), 0);
udata.flags = 0;
udata.corder = -1; /* XXX: None yet */
udata.found_op = NULL;
udata.found_op_data = NULL;
/* Create the "op_data" for the v2 B-tree record 'modify' callback */
op_data.f = f;
op_data.dxpl_id = dxpl_id;
op_data.fheap = fheap;
op_data.shared_fheap = shared_fheap;
op_data.attr = attr;
/* Modify attribute through 'name' tracking v2 B-tree */
if(H5B2_modify(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, &udata, H5A_dense_write_bt2_cb, &op_data) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINSERT, FAIL, "unable to modify record in v2 B-tree")
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_write() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_copy_fh_cb
*
* Purpose: Callback for fractal heap operator, to make copy of attribute
* for calling routine
*
* Return: SUCCEED/FAIL
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 5 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5A_dense_copy_fh_cb(const void *obj, size_t UNUSED obj_len, void *_udata)
{
H5A_fh_ud_cp_t *udata = (H5A_fh_ud_cp_t *)_udata; /* User data for fractal heap 'op' callback */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5A_dense_copy_fh_cb)
/* Decode attribute information & keep a copy */
/* (we make a copy instead of calling the user/library callback directly in
* this routine because this fractal heap 'op' callback routine is called
* with the direct block protected and if the callback routine invokes an
* HDF5 routine, it could attempt to re-protect that direct block for the
* heap, causing the HDF5 routine called to fail)
*/
if(NULL == (udata->attr = (H5A_t *)H5O_msg_decode(udata->f, udata->dxpl_id, H5O_ATTR_ID, (const unsigned char *)obj)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTDECODE, FAIL, "can't decode attribute")
/* Check whether we should "reconstitute" the shared message info */
if(udata->record->flags & H5O_MSG_FLAG_SHARED)
H5SM_reconstitute(&(udata->attr->sh_loc), udata->record->id);
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_copy_fh_cb() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_rename
*
* Purpose: Rename an attribute in dense storage structures for an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Jan 3 2007
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_rename(H5F_t *f, hid_t dxpl_id, const H5O_t *oh, const char *old_name,
const char *new_name)
{
H5A_bt2_ud_common_t udata; /* User data for v2 B-tree modify */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
H5A_t *attr_copy = NULL; /* Copy of attribute to rename */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
htri_t shared_mesg; /* Should this message be stored in the Shared Message table? */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_rename, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
HDassert(old_name);
HDassert(new_name);
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Create the "udata" information for v2 B-tree record modify */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.name = old_name;
udata.name_hash = H5_checksum_lookup3(old_name, HDstrlen(old_name), 0);
udata.flags = 0;
udata.corder = -1; /* XXX: None yet */
udata.found_op = H5A_dense_fnd_cb; /* v2 B-tree comparison callback */
udata.found_op_data = &attr_copy;
/* Get copy of attribute through 'name' tracking v2 B-tree */
if(H5B2_find(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, &udata, NULL, NULL) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINSERT, FAIL, "unable to find record in v2 B-tree")
HDassert(attr_copy);
/* Check if message is already shared */
if((shared_mesg = H5O_msg_is_shared(H5O_ATTR_ID, attr_copy)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "error determining if message is shared")
else if(shared_mesg > 0) {
/* Reset shared status of copy */
/* (so it will get shared again if necessary) */
attr_copy->sh_loc.flags = 0;
} /* end if */
/* Change name of attribute */
H5MM_xfree(attr_copy->name);
attr_copy->name = H5MM_xstrdup(new_name);
/* Insert renamed attribute back into dense storage */
/* (Possibly making it shared) */
if(H5A_dense_insert(f, dxpl_id, oh, attr_copy) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTINSERT, FAIL, "unable to add to dense storage")
/* Was this attribute shared? */
if((shared_mesg = H5O_msg_is_shared(H5O_ATTR_ID, attr_copy)) > 0) {
hsize_t attr_rc; /* Attribute's ref count in shared message storage */
/* Retrieve ref count for shared attribute */
if(H5SM_get_refcount(f, dxpl_id, H5O_ATTR_ID, &attr_copy->sh_loc, &attr_rc) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't retrieve shared message ref count")
/* If the newly shared attribute needs to share "ownership" of the shared
* components (ie. its reference count is 1), increment the reference
* count on any shared components of the attribute, so that they won't
* be removed from the file. (Essentially a "copy on write" operation).
*
* *ick* -QAK, 2007/01/08
*/
if(attr_rc == 1) {
/* Increment reference count on attribute components */
if(H5O_attr_link(f, dxpl_id, attr_copy) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_LINKCOUNT, FAIL, "unable to adjust attribute link count")
} /* end if */
} /* end if */
else if(shared_mesg == 0) {
/* Increment reference count on attribute components */
/* (so that they aren't deleted when the attribute is removed shortly) */
if(H5O_attr_link(f, dxpl_id, attr_copy) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_LINKCOUNT, FAIL, "unable to adjust attribute link count")
} /* end if */
else if(shared_mesg < 0)
HGOTO_ERROR(H5E_ATTR, H5E_WRITEERROR, FAIL, "error determining if message should be shared")
/* Delete old attribute from dense storage */
if(H5A_dense_remove(f, dxpl_id, oh, old_name) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTDELETE, FAIL, "unable to delete attribute in dense storage")
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(attr_copy)
H5O_msg_free(H5O_ATTR_ID, attr_copy);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_rename() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_iterate_bt2_cb
*
* Purpose: v2 B-tree callback for dense attribute storage iterator
*
* Return: H5_ITER_ERROR/H5_ITER_CONT/H5_ITER_STOP
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 5 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5A_dense_iterate_bt2_cb(const void *_record, void *_bt2_udata)
{
const H5A_dense_bt2_name_rec_t *record = (const H5A_dense_bt2_name_rec_t *)_record; /* Record from B-tree */
H5A_bt2_ud_it_t *bt2_udata = (H5A_bt2_ud_it_t *)_bt2_udata; /* User data for callback */
herr_t ret_value = H5_ITER_CONT; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5A_dense_iterate_bt2_cb)
/* Check for skipping attributes */
if(bt2_udata->skip > 0)
--bt2_udata->skip;
else {
H5A_fh_ud_cp_t fh_udata; /* User data for fractal heap 'op' callback */
H5HF_t *fheap; /* Fractal heap handle for attribute storage */
/* Check for iterating over shared attribute */
if(record->flags & H5O_MSG_FLAG_SHARED)
fheap = bt2_udata->shared_fheap;
else
fheap = bt2_udata->fheap;
/* Prepare user data for callback */
/* down */
fh_udata.f = bt2_udata->f;
fh_udata.dxpl_id = bt2_udata->dxpl_id;
fh_udata.record = record;
fh_udata.attr = NULL;
/* Call fractal heap 'op' routine, to copy the attribute information */
if(H5HF_op(fheap, bt2_udata->dxpl_id, &record->id, H5A_dense_copy_fh_cb, &fh_udata) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPERATE, H5_ITER_ERROR, "heap op callback failed")
/* Check which type of callback to make */
switch(bt2_udata->attr_op->op_type) {
case H5A_ATTR_OP_APP:
/* Make the application callback */
ret_value = (bt2_udata->attr_op->u.app_op)(bt2_udata->loc_id, fh_udata.attr->name, bt2_udata->op_data);
break;
case H5A_ATTR_OP_LIB:
/* Call the library's callback */
ret_value = (bt2_udata->attr_op->u.lib_op)(fh_udata.attr, bt2_udata->op_data);
} /* end switch */
/* Release the space allocated for the attribute */
H5O_msg_free(H5O_ATTR_ID, fh_udata.attr);
} /* end else */
/* Increment the number of attributes passed through */
/* (whether we skipped them or not) */
bt2_udata->count++;
/* Check for callback failure and pass along return value */
if(ret_value < 0)
HERROR(H5E_ATTR, H5E_CANTNEXT, "iteration operator failed");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_iterate_bt2_cb() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_iterate
*
* Purpose: Iterate over attributes in dense storage structures for an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 5 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_iterate(H5F_t *f, hid_t dxpl_id, hid_t loc_id, haddr_t attr_fheap_addr,
haddr_t name_bt2_addr, H5_iter_order_t order, unsigned skip,
unsigned *last_attr, const H5A_attr_iter_op_t *attr_op, void *op_data)
{
H5A_bt2_ud_it_t udata; /* User data for iterator callback */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
H5A_attr_table_t atable = {0, NULL}; /* Table of attributes */
hsize_t nrec; /* # of records in v2 B-tree */
herr_t ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_iterate, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(H5F_addr_defined(attr_fheap_addr));
HDassert(H5F_addr_defined(name_bt2_addr));
HDassert(attr_op);
/* Retrieve # of records in name index */
/* (# of records in all indices the same) */
if(H5B2_get_nrec(f, dxpl_id, H5A_BT2_NAME, name_bt2_addr, &nrec) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't retrieve # of records in index")
/* Check for skipping too many attributes */
if(skip > 0) {
/* Check for bad starting index */
if((hsize_t)skip >= nrec)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid index specified")
} /* end if */
/* Check on iteration order */
/* ("native" iteration order is unordered for this attribute storage mechanism) */
if(order == H5_ITER_NATIVE) {
htri_t attr_sharable; /* Flag indicating attributes are sharable */
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Construct the user data for v2 B-tree iterator callback */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.loc_id = loc_id;
udata.skip = skip;
udata.count = 0;
udata.attr_op = attr_op;
udata.op_data = op_data;
/* Iterate over the records in the v2 B-tree's "native" order */
/* (by hash of name) */
if((ret_value = H5B2_iterate(f, dxpl_id, H5A_BT2_NAME, name_bt2_addr,
H5A_dense_iterate_bt2_cb, &udata)) < 0)
HERROR(H5E_ATTR, H5E_BADITER, "attribute iteration failed");
/* Update last attribute looked at */
if(last_attr)
*last_attr = udata.count;
} /* end if */
else {
/* Build the table of attributes for this object */
if(H5A_dense_build_table(f, dxpl_id, nrec, attr_fheap_addr, name_bt2_addr,
H5_INDEX_NAME, order, &atable) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "error building table of attributes")
/* Iterate over attributes in table */
if((ret_value = H5A_attr_iterate_table(&atable, skip, last_attr, loc_id, attr_op, op_data)) < 0)
HERROR(H5E_ATTR, H5E_CANTNEXT, "iteration operator failed");
} /* end else */
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(atable.attrs && H5A_attr_release_table(&atable) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CANTFREE, FAIL, "unable to release attribute table")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_iterate() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_remove_bt2_cb
*
* Purpose: v2 B-tree callback for dense attribute storage record removal
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 11 2006
*
*-------------------------------------------------------------------------
*/
static herr_t
H5A_dense_remove_bt2_cb(const void *_record, void *_bt2_udata)
{
const H5A_dense_bt2_name_rec_t *record = (const H5A_dense_bt2_name_rec_t *)_record;
H5A_bt2_ud_common_t *bt2_udata = (H5A_bt2_ud_common_t *)_bt2_udata; /* User data for callback */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5A_dense_remove_bt2_cb)
/* Check for inserting shared attribute */
if(record->flags & H5O_MSG_FLAG_SHARED) {
/* Decrement the reference count on the shared attribute message */
if(H5SM_try_delete(bt2_udata->f, bt2_udata->dxpl_id, H5O_ATTR_ID, &((*(H5A_t **)bt2_udata->found_op_data)->sh_loc)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTFREE, FAIL, "unable to delete shared attribute")
} /* end if */
else {
/* Perform the deletion action on the attribute */
/* (takes care of shared & committed datatype/dataspace components) */
if(H5O_attr_delete(bt2_udata->f, bt2_udata->dxpl_id, *(H5A_t **)bt2_udata->found_op_data) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTDELETE, FAIL, "unable to delete attribute")
/* Remove record from fractal heap */
if(H5HF_remove(bt2_udata->fheap, bt2_udata->dxpl_id, &record->id) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTREMOVE, FAIL, "unable to remove attribute from fractal heap")
} /* end else */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_remove_bt2_cb() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_remove
*
* Purpose: Remove an attribute from the dense storage of an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 11 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_remove(H5F_t *f, hid_t dxpl_id, const H5O_t *oh, const char *name)
{
H5A_bt2_ud_common_t udata; /* User data for v2 B-tree record removal */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
H5A_t *attr_copy = NULL; /* Copy of attribute to remove */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_remove, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
HDassert(name && *name);
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Set up the user data for the v2 B-tree 'record remove' callback */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.name = name;
udata.name_hash = H5_checksum_lookup3(name, HDstrlen(name), 0);
udata.flags = 0;
udata.corder = -1; /* XXX: None yet */
udata.found_op = H5A_dense_fnd_cb; /* v2 B-tree comparison callback */
udata.found_op_data = &attr_copy;
/* Remove the record from the name index v2 B-tree */
if(H5B2_remove(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, &udata, H5A_dense_remove_bt2_cb, &udata) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTREMOVE, FAIL, "unable to remove attribute from name index v2 B-tree")
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(attr_copy)
H5O_msg_free_real(H5O_MSG_ATTR, attr_copy);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_remove() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_exists
*
* Purpose: Check if an attribute exists in dense storage structures for
* an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 11 2006
*
*-------------------------------------------------------------------------
*/
htri_t
H5A_dense_exists(H5F_t *f, hid_t dxpl_id, const H5O_t *oh, const char *name)
{
H5A_bt2_ud_common_t udata; /* User data for v2 B-tree modify */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
htri_t ret_value = TRUE; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_exists, NULL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
HDassert(name);
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Create the "udata" information for v2 B-tree record 'find' */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.name = name;
udata.name_hash = H5_checksum_lookup3(name, HDstrlen(name), 0);
udata.flags = 0;
udata.corder = -1; /* XXX: None yet */
udata.found_op = NULL; /* v2 B-tree comparison callback */
udata.found_op_data = NULL;
/* Find the attribute in the 'name' index */
if(H5B2_find(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, &udata, NULL, NULL) < 0) {
/* Assume that the failure was just not finding the attribute & clear stack */
H5E_clear_stack(NULL);
ret_value = FALSE;
} /* end if */
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_exists() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_delete_bt2_cb
*
* Purpose: v2 B-tree callback for dense attribute storage deletion
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Jan 3 2007
*
*-------------------------------------------------------------------------
*/
static herr_t
H5A_dense_delete_bt2_cb(const void *_record, void *_bt2_udata)
{
const H5A_dense_bt2_name_rec_t *record = (const H5A_dense_bt2_name_rec_t *)_record; /* Record from B-tree */
H5A_bt2_ud_common_t *bt2_udata = (H5A_bt2_ud_common_t *)_bt2_udata; /* User data for callback */
H5HF_t *fheap; /* Fractal heap handle for attribute storage */
H5A_fh_ud_cp_t fh_udata; /* User data for fractal heap 'op' callback */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5A_dense_delete_bt2_cb)
/* Check for shared attribute */
if(record->flags & H5O_MSG_FLAG_SHARED)
fheap = bt2_udata->shared_fheap;
else
fheap = bt2_udata->fheap;
/* Prepare user data for callback */
/* down */
fh_udata.f = bt2_udata->f;
fh_udata.dxpl_id = bt2_udata->dxpl_id;
fh_udata.record = record;
/* up */
fh_udata.attr = NULL;
/* Call fractal heap 'op' routine, to copy the attribute information */
if(H5HF_op(fheap, bt2_udata->dxpl_id, &record->id, H5A_dense_copy_fh_cb, &fh_udata) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPERATE, FAIL, "heap op callback failed")
/* Check for shared attribute */
if(record->flags & H5O_MSG_FLAG_SHARED) {
/* Decrement the reference count on the shared attribute message */
if(H5SM_try_delete(bt2_udata->f, bt2_udata->dxpl_id, H5O_ATTR_ID, &(fh_udata.attr->sh_loc)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTFREE, FAIL, "unable to delete shared attribute")
} /* end if */
else {
/* Perform the deletion action on the attribute */
/* (takes care of shared/committed datatype & dataspace components) */
if(H5O_attr_delete(bt2_udata->f, bt2_udata->dxpl_id, fh_udata.attr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTDELETE, FAIL, "unable to delete attribute")
} /* end else */
done:
/* Release resources */
if(fh_udata.attr)
H5O_msg_free_real(H5O_MSG_ATTR, fh_udata.attr);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_delete_bt2_cb() */
/*-------------------------------------------------------------------------
* Function: H5A_dense_delete
*
* Purpose: Delete all dense storage structures for attributes on an object
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Dec 6 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5A_dense_delete(H5F_t *f, hid_t dxpl_id, H5O_t *oh)
{
H5A_bt2_ud_common_t udata; /* v2 B-tree user data for deleting attributes */
H5HF_t *fheap = NULL; /* Fractal heap handle */
H5HF_t *shared_fheap = NULL; /* Fractal heap handle for shared header messages */
htri_t attr_sharable; /* Flag indicating attributes are sharable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5A_dense_delete, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(oh);
/* Open the fractal heap */
if(NULL == (fheap = H5HF_open(f, dxpl_id, oh->attr_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
/* Check if attributes are shared in this file */
if((attr_sharable = H5SM_type_shared(f, H5O_ATTR_ID, dxpl_id)) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't determine if attributes are shared")
/* Get handle for shared message heap, if attributes are sharable */
if(attr_sharable) {
haddr_t shared_fheap_addr; /* Address of fractal heap to use */
/* Retrieve the address of the shared message's fractal heap */
if(H5SM_get_fheap_addr(f, dxpl_id, H5O_ATTR_ID, &shared_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTGET, FAIL, "can't get shared message heap address")
/* Check if there are any shared messages currently */
if(H5F_addr_defined(shared_fheap_addr)) {
/* Open the fractal heap for shared header messages */
if(NULL == (shared_fheap = H5HF_open(f, dxpl_id, shared_fheap_addr)))
HGOTO_ERROR(H5E_ATTR, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap")
} /* end if */
} /* end if */
/* Create the "udata" information for v2 B-tree 'delete' */
udata.f = f;
udata.dxpl_id = dxpl_id;
udata.fheap = fheap;
udata.shared_fheap = shared_fheap;
udata.name = NULL;
udata.name_hash = 0;
udata.flags = 0;
udata.corder = -1; /* XXX: None yet */
udata.found_op = NULL; /* v2 B-tree comparison callback */
udata.found_op_data = NULL;
/* Delete name index v2 B-tree */
if(H5B2_delete(f, dxpl_id, H5A_BT2_NAME, oh->name_bt2_addr, H5A_dense_delete_bt2_cb, &udata) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTDELETE, FAIL, "unable to delete v2 B-tree for name index")
oh->name_bt2_addr = HADDR_UNDEF;
/* Release resources */
if(shared_fheap) {
if(H5HF_close(shared_fheap, dxpl_id) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
shared_fheap = NULL;
} /* end if */
if(H5HF_close(fheap, dxpl_id) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
fheap = NULL;
/* Delete fractal heap */
if(H5HF_delete(f, dxpl_id, oh->attr_fheap_addr) < 0)
HGOTO_ERROR(H5E_ATTR, H5E_CANTDELETE, FAIL, "unable to delete fractal heap")
oh->attr_fheap_addr = HADDR_UNDEF;
done:
/* Release resources */
if(shared_fheap && H5HF_close(shared_fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
if(fheap && H5HF_close(fheap, dxpl_id) < 0)
HDONE_ERROR(H5E_ATTR, H5E_CLOSEERROR, FAIL, "can't close fractal heap")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_delete() */
|