summaryrefslogtreecommitdiffstats
path: root/src/H5Aint.c
blob: 3bfb494cb260a6d9c3171d2bd9b2f2325e723675 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the files COPYING and Copyright.html.  COPYING can be found at the root   *
 * of the source code distribution tree; Copyright.html can be found at the  *
 * root level of an installed copy of the electronic HDF5 document set and   *
 * is linked from the top-level documents page.  It can also be found at     *
 * http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html.  If you do not have     *
 * access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

/*-------------------------------------------------------------------------
 *
 * Created:		H5Aint.c
 *			Dec 18 2006
 *			Quincey Koziol <koziol@hdfgroup.org>
 *
 * Purpose:		Internal routines for managing attributes.
 *
 *-------------------------------------------------------------------------
 */

/****************/
/* Module Setup */
/****************/

#define H5A_PACKAGE		/*suppress error about including H5Apkg  */
#define H5O_PACKAGE		/*suppress error about including H5Opkg	  */


/***********/
/* Headers */
/***********/
#include "H5private.h"		/* Generic Functions			*/
#include "H5Apkg.h"		/* Attributes	  			*/
#include "H5Eprivate.h"		/* Error handling		  	*/
#include "H5MMprivate.h"	/* Memory management			*/
#include "H5Opkg.h"             /* Object headers			*/


/****************/
/* Local Macros */
/****************/


/******************/
/* Local Typedefs */
/******************/

/* Data exchange structure to use when building table of compact attributes for an object */
typedef struct {
    H5F_t       *f;             /* Pointer to file that fractal heap is in */
    hid_t       dxpl_id;        /* DXPL for operation                */
    H5A_attr_table_t *atable;   /* Pointer to attribute table to build */
    size_t curr_attr;           /* Current attribute to operate on */
} H5A_compact_bt_ud_t;

/* Data exchange structure to use when building table of dense attributes for an object */
typedef struct {
    H5A_attr_table_t *atable;   /* Pointer to attribute table to build */
    size_t curr_attr;           /* Current attribute to operate on */
} H5A_dense_bt_ud_t;


/********************/
/* Package Typedefs */
/********************/


/********************/
/* Local Prototypes */
/********************/

static herr_t H5A_compact_build_table_cb(H5O_t *oh, H5O_mesg_t *mesg/*in,out*/,
    unsigned sequence, unsigned *oh_flags_ptr, void *_udata/*in,out*/);
static herr_t H5A_dense_build_table_cb(const H5A_t *attr, void *_udata);
static int H5A_attr_cmp_name_inc(const void *attr1, const void *attr2);
static herr_t H5A_attr_sort_table(H5A_attr_table_t *atable, H5_index_t idx_type,
    H5_iter_order_t order);

/*********************/
/* Package Variables */
/*********************/


/*****************************/
/* Library Private Variables */
/*****************************/


/*******************/
/* Local Variables */
/*******************/



/*-------------------------------------------------------------------------
 * Function:	H5A_compact_build_table_cb
 *
 * Purpose:	Object header iterator callback routine to copy attribute
 *              into table.
 *
 * Return:	Non-negative on success/Negative on failure
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Dec 18 2006
 *
 *-------------------------------------------------------------------------
 */
static herr_t
H5A_compact_build_table_cb(H5O_t UNUSED *oh, H5O_mesg_t *mesg/*in,out*/,
    unsigned UNUSED sequence, unsigned UNUSED *oh_flags_ptr, void *_udata/*in,out*/)
{
    H5A_compact_bt_ud_t *udata = (H5A_compact_bt_ud_t *)_udata;   /* Operator user data */
    herr_t ret_value = H5_ITER_CONT;    /* Return value */

    FUNC_ENTER_NOAPI_NOINIT(H5A_compact_build_table_cb)

    /* check args */
    HDassert(mesg);

    /* Check for re-allocating table */
    if(udata->curr_attr == udata->atable->nattrs) {
        size_t n = MAX(1, 2 * udata->atable->nattrs);
        H5A_t *table = (H5A_t *)H5MM_realloc(udata->atable->attrs,
                                          n * sizeof(H5A_t));

        if(!table)
            HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, H5_ITER_ERROR, "unable to extend attribute table")
        udata->atable->attrs = table;
        udata->atable->nattrs = n;
    } /* end if */

    /* Copy attribute into table */
    if(NULL == H5A_copy(&udata->atable->attrs[udata->curr_attr], (const H5A_t *)mesg->native))
        HGOTO_ERROR(H5E_ATTR, H5E_CANTCOPY, H5_ITER_ERROR, "can't copy attribute")

    /* Increment current attribute */
    udata->curr_attr++;

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_compact_build_table_cb() */


/*-------------------------------------------------------------------------
 * Function:	H5A_compact_build_table
 *
 * Purpose:     Builds a table containing a sorted list of attributes for
 *              an object
 *
 * Note:	Used for building table of attributes in non-native iteration
 *              order for an index
 *
 * Return:	Success:        Non-negative
 *		Failure:	Negative
 *
 * Programmer:	Quincey Koziol
 *	        Dec 18, 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5A_compact_build_table(H5F_t *f, hid_t dxpl_id, H5O_t *oh,
    H5_index_t UNUSED idx_type, H5_iter_order_t order,
    H5A_attr_table_t *atable, unsigned *oh_flags)
{
    H5A_compact_bt_ud_t udata;                  /* User data for iteration callback */
    H5O_mesg_operator_t op;             /* Wrapper for operator */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI_NOINIT(H5A_compact_build_table)

    /* Sanity check */
    HDassert(f);
    HDassert(oh);
    HDassert(atable);

    /* Initialize table */
    atable->attrs = NULL;
    atable->nattrs = 0;

    /* Set up user data for iteration */
    udata.f = f;
    udata.dxpl_id = dxpl_id;
    udata.atable = atable;
    udata.curr_attr = 0;

    /* Iterate over existing attributes, checking for attribute with same name */
    op.lib_op = H5A_compact_build_table_cb;
    if(H5O_msg_iterate_real(f, oh, H5O_MSG_ATTR, TRUE, op, &udata, dxpl_id, oh_flags) < 0)
        HGOTO_ERROR(H5E_ATTR, H5E_BADITER, FAIL, "error building attribute table")

    /* Correct # of attributes in table */
    atable->nattrs = udata.curr_attr;

    /* Sort attribute table in correct iteration order */
    if(H5A_attr_sort_table(atable, H5_INDEX_NAME, order) < 0)
        HGOTO_ERROR(H5E_ATTR, H5E_CANTSORT, FAIL, "error sorting attribute table")

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_compact_build_table() */


/*-------------------------------------------------------------------------
 * Function:	H5A_dense_build_table_cb
 *
 * Purpose:	Callback routine for building table of attributes from dense
 *              attribute storage.
 *
 * Return:	Success:        Non-negative
 *		Failure:	Negative
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Dec 11 2006
 *
 *-------------------------------------------------------------------------
 */
static herr_t
H5A_dense_build_table_cb(const H5A_t *attr, void *_udata)
{
    H5A_dense_bt_ud_t *udata = (H5A_dense_bt_ud_t *)_udata;     /* 'User data' passed in */
    herr_t ret_value = H5_ITER_CONT;   /* Return value */

    FUNC_ENTER_NOAPI_NOINIT(H5A_dense_build_table_cb)

    /* check arguments */
    HDassert(attr);
    HDassert(udata);
    HDassert(udata->curr_attr < udata->atable->nattrs);

    /* Copy attribute information */
    if(NULL == H5A_copy(&udata->atable->attrs[udata->curr_attr], attr))
        HGOTO_ERROR(H5E_ATTR, H5E_CANTCOPY, H5_ITER_ERROR, "can't copy attribute")

    /* Increment number of attributes stored */
    udata->curr_attr++;

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_build_table_cb() */


/*-------------------------------------------------------------------------
 * Function:	H5A_dense_build_table
 *
 * Purpose:     Builds a table containing a sorted list of attributes for
 *              an object
 *
 * Note:	Used for building table of attributes in non-native iteration
 *              order for an index
 *
 * Return:	Success:        Non-negative
 *		Failure:	Negative
 *
 * Programmer:	Quincey Koziol
 *	        Dec 11, 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5A_dense_build_table(H5F_t *f, hid_t dxpl_id, hsize_t nattrs, haddr_t attr_fheap_addr,
    haddr_t name_bt2_addr, H5_index_t UNUSED idx_type, H5_iter_order_t order,
    H5A_attr_table_t *atable)
{
    herr_t	ret_value = SUCCEED;    /* Return value */

    FUNC_ENTER_NOAPI_NOINIT(H5A_dense_build_table)

    /* Sanity check */
    HDassert(f);
    HDassert(H5F_addr_defined(attr_fheap_addr));
    HDassert(H5F_addr_defined(name_bt2_addr));
    HDassert(atable);

    /* Set size of table */
    H5_CHECK_OVERFLOW(nattrs, /* From: */ hsize_t, /* To: */ size_t);
    atable->nattrs = (size_t)nattrs;

    /* Allocate space for the table entries */
    if(atable->nattrs > 0) {
        H5A_dense_bt_ud_t udata;       /* User data for iteration callback */
        H5A_attr_iter_op_t attr_op;    /* Attribute operator */

        /* Allocate the table to store the attributes */
        if((atable->attrs = (H5A_t *)H5MM_malloc(sizeof(H5A_t) * atable->nattrs)) == NULL)
            HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")

        /* Set up user data for iteration */
        udata.atable = atable;
        udata.curr_attr = 0;

        /* Build iterator operator */
        attr_op.op_type = H5A_ATTR_OP_LIB;
        attr_op.u.lib_op = H5A_dense_build_table_cb;

        /* Iterate over the links in the group, building a table of the link messages */
        if(H5A_dense_iterate(f, dxpl_id, (hid_t)0, attr_fheap_addr, name_bt2_addr,
                H5_ITER_NATIVE, (unsigned)0, NULL, &attr_op, &udata) < 0)
            HGOTO_ERROR(H5E_ATTR, H5E_CANTINIT, FAIL, "error building attribute table")

        /* Sort attribute table in correct iteration order */
        if(H5A_attr_sort_table(atable, H5_INDEX_NAME, order) < 0)
            HGOTO_ERROR(H5E_ATTR, H5E_CANTSORT, FAIL, "error sorting attribute table")
    } /* end if */
    else
        atable->attrs = NULL;

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_dense_build_table() */


/*-------------------------------------------------------------------------
 * Function:	H5A_attr_cmp_name_inc
 *
 * Purpose:	Callback routine for comparing two attribute names, in
 *              increasing alphabetic order
 *
 * Return:	An integer less than, equal to, or greater than zero if the
 *              first argument is considered to be respectively less than,
 *              equal to, or greater than the second.  If two members compare
 *              as equal, their order in the sorted array is undefined.
 *              (i.e. same as strcmp())
 *
 * Programmer:	Quincey Koziol
 *		koziol@hdfgroup.org
 *		Dec 11 2005
 *
 *-------------------------------------------------------------------------
 */
static int
H5A_attr_cmp_name_inc(const void *attr1, const void *attr2)
{
    FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5A_attr_cmp_name_inc)

    FUNC_LEAVE_NOAPI(HDstrcmp(((const H5A_t *)attr1)->name, ((const H5A_t *)attr2)->name))
} /* end H5A_attr_cmp_name_inc() */


/*-------------------------------------------------------------------------
 * Function:	H5A_attr_sort_table
 *
 * Purpose:     Sort table containing a list of attributes for an object
 *
 * Return:	Success:        Non-negative
 *		Failure:	Negative
 *
 * Programmer:	Quincey Koziol
 *	        Dec 11, 2006
 *
 *-------------------------------------------------------------------------
 */
static herr_t
H5A_attr_sort_table(H5A_attr_table_t *atable, H5_index_t idx_type,
    H5_iter_order_t order)
{
    FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5A_attr_sort_table)

    /* Sanity check */
    HDassert(atable);

    /* Pick appropriate comparison routine */
#ifdef NOT_YET
    if(idx_type == H5_INDEX_NAME) {
#else /* NOT_YET */
HDassert(idx_type == H5_INDEX_NAME);
#endif /* NOT_YET */
        if(order == H5_ITER_INC)
            HDqsort(atable->attrs, atable->nattrs, sizeof(H5A_t), H5A_attr_cmp_name_inc);
#ifdef NOT_YET
        else if(order == H5_ITER_DEC)
            HDqsort(ltable->lnks, ltable->nlinks, sizeof(H5O_link_t), H5G_link_cmp_name_dec);
#endif /* NOT_YET */
        else
            HDassert(order == H5_ITER_NATIVE);
#ifdef NOT_YET
    } /* end if */
    else {
        HDassert(idx_type == H5_INDEX_CRT_ORDER);
        if(order == H5_ITER_INC)
            HDqsort(ltable->lnks, ltable->nlinks, sizeof(H5O_link_t), H5G_link_cmp_corder_inc);
        else if(order == H5_ITER_DEC)
            HDqsort(ltable->lnks, ltable->nlinks, sizeof(H5O_link_t), H5G_link_cmp_corder_dec);
        else
            HDassert(order == H5_ITER_NATIVE);
    } /* end else */
#endif /* NOT_YET */

    FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5A_attr_sort_table() */


/*-------------------------------------------------------------------------
 * Function:	H5A_attr_iterate_table
 *
 * Purpose:     Iterate over table containing a list of attributes for an object,
 *              making appropriate callbacks
 *
 * Return:	Success:        Non-negative
 *		Failure:	Negative
 *
 * Programmer:	Quincey Koziol
 *	        Dec 18, 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5A_attr_iterate_table(const H5A_attr_table_t *atable, unsigned skip,
    unsigned *last_attr, hid_t loc_id, const H5A_attr_iter_op_t *attr_op,
    void *op_data)
{
    size_t u;                           /* Local index variable */
    herr_t ret_value = H5_ITER_CONT;   /* Return value */

    FUNC_ENTER_NOAPI(H5A_attr_iterate_table, FAIL)

    /* Sanity check */
    HDassert(atable);
    HDassert(attr_op);

    /* Skip over attributes, if requested */
    if(last_attr)
        *last_attr = skip;

    /* Iterate over attribute messages */
    H5_ASSIGN_OVERFLOW(/* To: */ u, /* From: */ skip, /* From: */ unsigned, /* To: */ size_t)
    for(; u < atable->nattrs && !ret_value; u++) {
        /* Check which type of callback to make */
        switch(attr_op->op_type) {
            case H5A_ATTR_OP_APP:
                /* Make the application callback */
                ret_value = (attr_op->u.app_op)(loc_id, atable->attrs[u].name, op_data);
                break;

            case H5A_ATTR_OP_LIB:
                /* Call the library's callback */
                ret_value = (attr_op->u.lib_op)(&(atable->attrs[u]), op_data);
        } /* end switch */

        /* Increment the number of entries passed through */
        if(last_attr)
            (*last_attr)++;
    } /* end for */

    /* Check for callback failure and pass along return value */
    if(ret_value < 0)
        HERROR(H5E_ATTR, H5E_CANTNEXT, "iteration operator failed");

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_attr_iterate_table() */


/*-------------------------------------------------------------------------
 * Function:	H5A_attr_release_table
 *
 * Purpose:     Release table containing a list of attributes for an object
 *
 * Return:	Success:        Non-negative
 *		Failure:	Negative
 *
 * Programmer:	Quincey Koziol
 *	        Dec 11, 2006
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5A_attr_release_table(H5A_attr_table_t *atable)
{
    size_t      u;                      /* Local index variable */
    herr_t	ret_value = SUCCEED;    /* Return value */

    FUNC_ENTER_NOAPI_NOINIT(H5A_attr_release_table)

    /* Sanity check */
    HDassert(atable);

    /* Release attribute info, if any */
    if(atable->nattrs > 0) {
        /* Free attribute message information */
        for(u = 0; u < atable->nattrs; u++)
            if(H5A_free(&(atable->attrs[u])) < 0)
                HGOTO_ERROR(H5E_ATTR, H5E_CANTFREE, FAIL, "unable to release attribute")

        /* Free table of attributes */
        H5MM_xfree(atable->attrs);
    } /* end if */
    else
        HDassert(atable->attrs == NULL);

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5A_attr_release_table() */