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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5B2.c
* Jan 31 2005
* Quincey Koziol <koziol@ncsa.uiuc.edu>
*
* Purpose: Implements a B-tree, with several modifications from
* the "standard" methods.
*
* Please see the documentation in:
* doc/html/TechNotes/Btrees.html for a full description
* of how they work, etc.
*
*-------------------------------------------------------------------------
*/
#define H5B2_PACKAGE /*suppress error about including H5B2pkg */
/* Private headers */
#include "H5private.h" /* Generic Functions */
#include "H5B2pkg.h" /* B-trees */
#include "H5Eprivate.h" /* Error handling */
#include "H5MFprivate.h" /* File memory management */
/* Local macros */
/* Format overhead for each node (on disk) */
#define H5B2_OVERHEAD_SIZE (H5B2_SIZEOF_MAGIC+1) /* Signature + version # */
/* Number of records that fit into internal node */
#define H5B2_NUM_INT_REC(f,n,r) (((n)-(H5B2_OVERHEAD_SIZE+H5B2_NODE_POINTER_SIZE(f)))/((r)+H5B2_NODE_POINTER_SIZE(f)))
/* Number of records that fit into leaf node */
#define H5B2_NUM_LEAF_REC(n,r) (((n)-H5B2_OVERHEAD_SIZE)/(r))
/* Local typedefs */
/* Local prototypes */
/* Helper functions */
static herr_t H5B2_create_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
H5B2_node_ptr_t *node_ptr);
static herr_t H5B2_create_internal(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
H5B2_node_ptr_t *node_ptr);
static int H5B2_locate_record(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type,
unsigned nrec, size_t *rec_off, const uint8_t *native,
const void *udata);
static herr_t H5B2_split_root(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2,
H5RC_t *bt2_shared);
static herr_t H5B2_redistribute2(H5F_t *f, hid_t dxpl_id, unsigned depth,
H5B2_internal_t *internal, unsigned idx);
static herr_t H5B2_split2(H5F_t *f, hid_t dxpl_id, unsigned depth,
H5B2_node_ptr_t *curr_node_ptr, H5AC_info_t *parent_cache_info,
H5B2_internal_t *internal, unsigned idx);
static herr_t H5B2_redistribute3(H5F_t *f, hid_t dxpl_id, unsigned depth,
H5B2_internal_t *internal, unsigned idx);
static herr_t H5B2_iterate_node(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared,
unsigned depth, const H5B2_node_ptr_t *curr_node, H5B2_operator_t op,
void *op_data);
/* Package variables */
/* Declare a free list to manage the H5B2_t struct */
H5FL_DEFINE(H5B2_t);
/* Declare a free list to manage the H5B2_internal_t struct */
H5FL_DEFINE(H5B2_internal_t);
/* Declare a free list to manage the H5B2_leaf_t struct */
H5FL_DEFINE(H5B2_leaf_t);
/* Static variables */
/* Declare a free list to manage B-tree node pages to/from disk */
H5FL_BLK_DEFINE_STATIC(node_page);
/* Declare a free list to manage the 'size_t' sequence information */
H5FL_SEQ_DEFINE_STATIC(size_t);
/* Declare a free list to manage the H5B2_shared_t struct */
H5FL_DEFINE_STATIC(H5B2_shared_t);
/*-------------------------------------------------------------------------
* Function: H5B2_shared_init
*
* Purpose: Allocate & initialize shared B-tree info
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 2 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5B2_shared_init (H5F_t *f, H5B2_t *bt2, const H5B2_class_t *type,
size_t node_size, size_t rrec_size,
unsigned split_percent, unsigned merge_percent)
{
H5B2_shared_t *shared = NULL; /* Shared B-tree information */
unsigned u; /* Local index variable */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5B2_shared_init)
/* Allocate space for the shared information */
if(NULL==(shared = H5FL_CALLOC(H5B2_shared_t)))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree shared information")
/* Assign user's information */
shared->split_percent = split_percent;
shared->merge_percent = merge_percent;
shared->node_size = node_size;
shared->rrec_size = rrec_size;
/* Compute derived information */
shared->internal_nrec = H5B2_NUM_INT_REC(f,shared->node_size,shared->rrec_size);
shared->split_int_nrec = (shared->internal_nrec * shared->split_percent)/100;
shared->merge_int_nrec = (shared->internal_nrec * shared->merge_percent)/100;
shared->leaf_nrec = H5B2_NUM_LEAF_REC(shared->node_size,shared->rrec_size);
shared->split_leaf_nrec = (shared->leaf_nrec * shared->split_percent)/100;
shared->merge_leaf_nrec = (shared->leaf_nrec * shared->merge_percent)/100;
/* Assign common type information */
shared->type = type;
/* Allocate "page" for node I/O */
if((shared->page=H5FL_BLK_MALLOC(node_page,shared->node_size))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed");
#ifdef H5_USING_PURIFY
HDmemset(shared->page,0,shared->node_size);
#endif /* H5_USING_PURIFY */
/* Create factory for internal node native record storage */
if((shared->int_fac=H5FL_fac_init(type->nrec_size*shared->internal_nrec))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_CANTINIT, NULL, "can't create internal node native key block factory")
/* Create factory for leaf node native record storage */
if((shared->leaf_fac=H5FL_fac_init(type->nrec_size*shared->leaf_nrec))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_CANTINIT, NULL, "can't create leaf node native key block factory")
/* Create factory for internal node node pointer storage */
if((shared->node_ptr_fac=H5FL_fac_init(sizeof(H5B2_node_ptr_t)*(shared->internal_nrec+1)))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_CANTINIT, NULL, "can't create internal node node pointer block factory")
/* Allocate array of pointers to internal node native keys */
if((shared->nat_off=H5FL_SEQ_MALLOC(size_t,MAX(shared->internal_nrec,shared->leaf_nrec)))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed");
/* Initialize offsets in native key block */
for(u=0; u<MAX(shared->internal_nrec,shared->leaf_nrec); u++)
shared->nat_off[u]=type->nrec_size*u;
/* Make shared B-tree info reference counted */
if(NULL==(bt2->shared=H5RC_create(shared,H5B2_shared_free)))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "can't create ref-count wrapper for shared B-tree info")
done:
if(ret_value<0)
if(shared)
H5B2_shared_free(shared);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5B2_shared_init() */
/*-------------------------------------------------------------------------
* Function: H5B2_shared_free
*
* Purpose: Free shared B-tree info
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 2 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5B2_shared_free (void *_shared)
{
H5B2_shared_t *shared = (H5B2_shared_t *)_shared;
herr_t ret_value=SUCCEED;
FUNC_ENTER_NOAPI_NOINIT(H5B2_shared_free)
/* Sanity check */
HDassert(shared);
/* Free the B-tree node buffer */
if(shared->page)
H5FL_BLK_FREE(node_page,shared->page);
/* Destroy factory for internal node native record storage */
if(shared->int_fac)
if(H5FL_fac_term(shared->int_fac)<0)
HGOTO_ERROR (H5E_RESOURCE, H5E_CANTRELEASE, FAIL, "can't destroy internal node native key block factory")
/* Destroy factory for leaf node native record storage */
if(shared->leaf_fac)
if(H5FL_fac_term(shared->leaf_fac)<0)
HGOTO_ERROR (H5E_RESOURCE, H5E_CANTRELEASE, FAIL, "can't destroy leaf node native key block factory")
/* Destroy factory for internal node node pointer storage */
if(shared->node_ptr_fac)
if(H5FL_fac_term(shared->node_ptr_fac)<0)
HGOTO_ERROR (H5E_RESOURCE, H5E_CANTRELEASE, FAIL, "can't destroy internal node node pointer block factory")
/* Free the array of offsets into the native key block */
if(shared->nat_off)
H5FL_SEQ_FREE(size_t,shared->nat_off);
/* Free the shared B-tree info itself */
H5FL_FREE(H5B2_shared_t,shared);
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5B2_shared_free() */
/*-------------------------------------------------------------------------
* Function: H5B2_create
*
* Purpose: Creates a new empty B-tree in the file.
*
* Return: Success: Pointer to a new B-tree.
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Jan 31 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5B2_create(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type,
size_t node_size, size_t rrec_size,
unsigned split_percent, unsigned merge_percent, haddr_t *addr_p)
{
H5B2_t *bt2 = NULL; /* The new B-tree header information */
herr_t ret_value=SUCCEED;
FUNC_ENTER_NOAPI(H5B2_create, FAIL)
/*
* Check arguments.
*/
HDassert(f);
HDassert(type);
HDassert(node_size>0);
HDassert(rrec_size>0);
HDassert(merge_percent>0 && merge_percent<=100);
HDassert(split_percent>0 && split_percent<=100);
HDassert(merge_percent<(split_percent/2));
/*
* Allocate file and memory data structures.
*/
if (NULL==(bt2 = H5FL_MALLOC(H5B2_t)))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree header")
/* Assign internal information */
HDmemset(&bt2->cache_info,0,sizeof(H5AC_info_t));
bt2->cache_info.is_dirty = TRUE;
bt2->depth = 0;
bt2->root.addr = HADDR_UNDEF;
bt2->root.node_nrec = bt2->root.all_nrec = 0;
/* Initialize shared B-tree info */
if(H5B2_shared_init(f, bt2, type, node_size, rrec_size, split_percent, merge_percent)<0)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "can't create shared B-tree info")
/* Allocate space for the header on disk */
if (HADDR_UNDEF==(*addr_p=H5MF_alloc(f, H5FD_MEM_BTREE, dxpl_id, (hsize_t)H5B2_HEADER_SIZE(f))))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for B-tree header")
/* Cache the new B-tree node */
if (H5AC_set(f, dxpl_id, H5AC_BT2_HDR, *addr_p, bt2, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "can't add B-tree header to cache")
done:
if (ret_value<0) {
if (bt2)
(void)H5B2_cache_hdr_dest(f,bt2);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5B2_create() */
/*-------------------------------------------------------------------------
* Function: H5B2_locate_record
*
* Purpose: Performs a binary search to locate a record in a sorted
* array of records.
*
* Return: Success: Non-negative array index where new record
* should be inserted
*
* Failure: Negative, if record already is in array of
* records.
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 3 2005
*
*-------------------------------------------------------------------------
*/
static int
H5B2_locate_record(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type,
unsigned nrec, size_t *rec_off, const uint8_t *native,
const void *udata)
{
unsigned lo = 0, hi; /* Low & high index values */
int idx = 0; /* Final index value */
int cmp = -1; /* Key comparison value */
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5B2_locate_record)
hi = nrec;
while (lo < hi && cmp) {
idx = (lo + hi) / 2;
if ((cmp = (type->compare)(f, dxpl_id, udata, native+rec_off[idx])) < 0)
hi = idx;
else
lo = idx + 1;
}
if(cmp==0)
idx=(-1);
else if(cmp>0)
idx++;
FUNC_LEAVE_NOAPI(idx);
} /* end H5B2_locate_record */
/*-------------------------------------------------------------------------
* Function: H5B2_split_root
*
* Purpose: Split the root node
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 3 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_split_root(H5F_t *f, hid_t dxpl_id, H5B2_t *bt2, H5RC_t *bt2_shared)
{
const H5AC_class_t *child_class; /* Pointer to child node's class info */
H5B2_internal_t *new_root; /* Pointer to new root node */
haddr_t left_addr, right_addr; /* Addresses of left & right child nodes */
void *left_child, *right_child; /* Pointers to child nodes */
unsigned *left_nrec, *right_nrec; /* Pointers to child # of records */
uint8_t *left_native, *right_native;/* Pointers to childs' native records */
H5B2_node_ptr_t *left_node_ptrs=NULL, *right_node_ptrs=NULL;/* Pointers to childs' node pointer info */
H5B2_shared_t *shared; /* B-tree's shared info */
unsigned mid_record; /* Index of "middle" record in current node */
unsigned old_root_nrec; /* Number of records in root node */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5B2_split_root)
HDassert(f);
HDassert(bt2);
HDassert(bt2_shared);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(bt2_shared);
HDassert(shared);
if(bt2->depth>0) {
H5B2_internal_t *old_int=NULL, *new_int=NULL; /* Pointers to old & new internal nodes */
H5B2_node_ptr_t new_int_ptr; /* Node pointer to manage new internal node */
/* Create new internal node */
new_int_ptr.all_nrec=new_int_ptr.node_nrec=0;
if(H5B2_create_internal(f, dxpl_id, bt2_shared, &new_int_ptr)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "unable to create new internal node")
/* Setup information for unlocking child nodes */
child_class = H5AC_BT2_INT;
left_addr = bt2->root.addr;
right_addr = new_int_ptr.addr;
/* Protect both leafs */
if (NULL == (old_int = H5AC_protect(f, dxpl_id, H5AC_BT2_INT, left_addr, &(bt2->root.node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree internal node")
if (NULL == (new_int = H5AC_protect(f, dxpl_id, H5AC_BT2_INT, right_addr, &(new_int_ptr.node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree internal node")
/* More setup for child nodes */
left_child = old_int;
right_child = new_int;
left_nrec = &(old_int->nrec);
right_nrec = &(new_int->nrec);
left_native = old_int->int_native;
right_native = new_int->int_native;
left_node_ptrs = old_int->node_ptrs;
right_node_ptrs = new_int->node_ptrs;
/* Mark child nodes as dirty now */
old_int->cache_info.is_dirty = TRUE;
new_int->cache_info.is_dirty = TRUE;
} /* end if */
else {
H5B2_leaf_t *old_leaf=NULL, *new_leaf=NULL; /* Pointers to old & new leaf nodes */
H5B2_node_ptr_t new_leaf_ptr; /* Node pointer to manage new leaf node */
/* Create new leaf node */
new_leaf_ptr.all_nrec=new_leaf_ptr.node_nrec=0;
if(H5B2_create_leaf(f, dxpl_id, bt2_shared, &new_leaf_ptr)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "unable to create new leaf node")
/* Setup information for unlocking child nodes */
child_class = H5AC_BT2_LEAF;
left_addr = bt2->root.addr;
right_addr = new_leaf_ptr.addr;
/* Protect both leafs */
if (NULL == (old_leaf = H5AC_protect(f, dxpl_id, H5AC_BT2_LEAF, left_addr, &(bt2->root.node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (new_leaf = H5AC_protect(f, dxpl_id, H5AC_BT2_LEAF, right_addr, &(new_leaf_ptr.node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* More setup for child nodes */
left_child = old_leaf;
right_child = new_leaf;
left_nrec = &(old_leaf->nrec);
right_nrec = &(new_leaf->nrec);
left_native = old_leaf->leaf_native;
right_native = new_leaf->leaf_native;
/* Mark child nodes as dirty now */
old_leaf->cache_info.is_dirty = TRUE;
new_leaf->cache_info.is_dirty = TRUE;
} /* end if */
/* Set the old number of records in root node */
old_root_nrec = bt2->root.node_nrec;
/* Determine "middle" record to promote to new root */
mid_record = old_root_nrec/2;
/* Copy "upper half" of records to new child */
HDmemcpy(H5B2_NAT_NREC(right_native,shared,0),H5B2_NAT_NREC(left_native,shared,mid_record+1),shared->type->nrec_size*(old_root_nrec-(mid_record+1)));
/* Copy "upper half" of format root's node pointers, if the children of the root are internal nodes */
if(bt2->depth>0)
HDmemcpy(&(right_node_ptrs[0]),&(left_node_ptrs[mid_record+1]),sizeof(H5B2_node_ptr_t)*(old_root_nrec-mid_record));
/* Create new internal node to use as root */
if(H5B2_create_internal(f, dxpl_id, bt2_shared, &(bt2->root))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "unable to create new internal node")
/* Protect new internal node */
if (NULL == (new_root = H5AC_protect(f, dxpl_id, H5AC_BT2_INT, bt2->root.addr, &(bt2->root.node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree internal node")
/* Copy "middle" record to new internal node */
HDmemcpy(H5B2_INT_NREC(new_root,shared,0),H5B2_NAT_NREC(left_native,shared,mid_record),shared->type->nrec_size);
/* Set internal node pointers to child nodes */
new_root->node_ptrs[0].addr = left_addr;
new_root->node_ptrs[1].addr = right_addr;
/* Update record counts in child nodes */
new_root->node_ptrs[0].node_nrec = *left_nrec = mid_record;
new_root->node_ptrs[1].node_nrec = *right_nrec = old_root_nrec-(mid_record+1);
/* Determine total number of records in new child nodes */
if(bt2->depth>0) {
unsigned u; /* Local index variable */
unsigned new_left_all_nrec; /* New total number of records in left child */
unsigned new_right_all_nrec; /* New total number of records in right child */
/* Compute total of all records in each child node */
new_left_all_nrec = new_root->node_ptrs[0].node_nrec;
for(u=0; u<(*left_nrec+1); u++)
new_left_all_nrec += left_node_ptrs[u].all_nrec;
new_right_all_nrec = new_root->node_ptrs[1].node_nrec;
for(u=0; u<(*right_nrec+1); u++)
new_right_all_nrec += right_node_ptrs[u].all_nrec;
new_root->node_ptrs[0].all_nrec = new_left_all_nrec;
new_root->node_ptrs[1].all_nrec = new_right_all_nrec;
} /* end if */
else {
new_root->node_ptrs[0].all_nrec = new_root->node_ptrs[0].node_nrec;
new_root->node_ptrs[1].all_nrec = new_root->node_ptrs[1].node_nrec;
} /* end else */
/* Update record count in new internal node */
new_root->nrec = 1;
/* Mark new internal node as dirty */
new_root->cache_info.is_dirty = TRUE;
/* Release new internal node */
if (H5AC_unprotect(f, dxpl_id, H5AC_BT2_INT, bt2->root.addr, new_root, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree internal node")
/* Release child nodes */
if (H5AC_unprotect(f, dxpl_id, child_class, left_addr, left_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree leaf node")
if (H5AC_unprotect(f, dxpl_id, child_class, right_addr, right_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree leaf node")
/* Update depth of B-tree */
bt2->depth++;
/* Update pointer to B-tree's root node to pointer to new internal node */
bt2->root.node_nrec = 1;
/* Mark B-tree header as dirty */
bt2->cache_info.is_dirty = TRUE;
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5B2_split_root */
/*-------------------------------------------------------------------------
* Function: H5B2_redistribute2
*
* Purpose: Redistribute records between two nodes
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 9 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_redistribute2(H5F_t *f, hid_t dxpl_id, unsigned depth, H5B2_internal_t *internal, unsigned idx)
{
const H5AC_class_t *child_class; /* Pointer to child node's class info */
haddr_t left_addr, right_addr; /* Addresses of left & right child nodes */
void *left_child, *right_child; /* Pointers to child nodes */
unsigned *left_nrec, *right_nrec; /* Pointers to child # of records */
uint8_t *left_native, *right_native; /* Pointers to childs' native records */
H5B2_shared_t *shared; /* B-tree's shared info */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5B2_redistribute2)
HDassert(f);
HDassert(internal);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(internal->shared);
HDassert(shared);
/* Check for the kind of B-tree node to redistribute */
if(depth>1) {
HDfprintf(stderr,"%s: redistributing internal node! (need to handle node_ptrs)\n",FUNC);
HGOTO_ERROR(H5E_BTREE, H5E_CANTREDISTRIBUTE, FAIL, "unable to redistribute records")
} /* end if */
else {
H5B2_leaf_t *left_leaf; /* Pointer to left leaf node */
H5B2_leaf_t *right_leaf; /* Pointer to right leaf node */
/* Setup information for unlocking child nodes */
child_class = H5AC_BT2_LEAF;
left_addr = internal->node_ptrs[idx].addr;
right_addr = internal->node_ptrs[idx+1].addr;
/* Lock left & right B-tree child nodes */
if (NULL == (left_leaf = H5AC_protect(f, dxpl_id, child_class, left_addr, &(internal->node_ptrs[idx].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (right_leaf = H5AC_protect(f, dxpl_id, child_class, right_addr, &(internal->node_ptrs[idx+1].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* More setup for child nodes */
left_child = left_leaf;
right_child = right_leaf;
left_nrec = &(left_leaf->nrec);
right_nrec = &(right_leaf->nrec);
left_native = left_leaf->leaf_native;
right_native = right_leaf->leaf_native;
/* Mark child nodes as dirty now */
left_leaf->cache_info.is_dirty = TRUE;
right_leaf->cache_info.is_dirty = TRUE;
} /* end else */
/* Determine whether to shuffle records left or right */
if(*left_nrec<*right_nrec) {
/* Moving record from right node to left */
unsigned new_right_nrec = (*left_nrec+*right_nrec)/2; /* New number of records for right child */
unsigned move_nrec = *right_nrec - new_right_nrec; /* Number of records to move from right node to left */
/* Copy record from parent node down into left child */
HDmemcpy(H5B2_NAT_NREC(left_native,shared,*left_nrec),H5B2_INT_NREC(internal,shared,idx),shared->type->nrec_size);
/* See if we need to move records from right node */
if(move_nrec>1)
HDmemcpy(H5B2_NAT_NREC(left_native,shared,(*left_nrec+1)),H5B2_NAT_NREC(right_native,shared,0),shared->type->nrec_size*(move_nrec-1));
/* Move record from right node into parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx),H5B2_NAT_NREC(right_native,shared,(move_nrec-1)),shared->type->nrec_size);
/* Slide records in right node down */
HDmemmove(H5B2_NAT_NREC(right_native,shared,0),H5B2_NAT_NREC(right_native,shared,move_nrec),shared->type->nrec_size*new_right_nrec);
/* Update number of records in child nodes */
*left_nrec += move_nrec;
*right_nrec = new_right_nrec;
} /* end if */
else {
/* Moving record from left node to right */
unsigned new_left_nrec = (*left_nrec+*right_nrec)/2; /* New number of records for left child */
unsigned move_nrec = *left_nrec - new_left_nrec; /* Number of records to move from left node to right */
/* Slide records in right node up */
HDmemmove(H5B2_NAT_NREC(right_native,shared,move_nrec),
H5B2_NAT_NREC(right_native,shared,0),
shared->type->nrec_size*(*right_nrec));
/* Copy record from parent node down into right child */
HDmemcpy(H5B2_NAT_NREC(right_native,shared,(move_nrec-1)),H5B2_INT_NREC(internal,shared,idx),shared->type->nrec_size);
/* See if we need to move records from left node */
if(move_nrec>1)
HDmemcpy(H5B2_NAT_NREC(right_native,shared,0),H5B2_NAT_NREC(left_native,shared,((*left_nrec-move_nrec)+1)),shared->type->nrec_size*(move_nrec-1));
/* Move record from left node into parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx),H5B2_NAT_NREC(left_native,shared,(*left_nrec-move_nrec)),shared->type->nrec_size);
/* Update number of records in child nodes */
*left_nrec = new_left_nrec;
*right_nrec += move_nrec;
} /* end else */
/* Update # of records in child nodes */
/* Hmm, this value for 'all_rec' wont' be right for internal nodes... */
internal->node_ptrs[idx].all_nrec = internal->node_ptrs[idx].node_nrec = *left_nrec;
internal->node_ptrs[idx+1].all_nrec = internal->node_ptrs[idx+1].node_nrec = *right_nrec;
/* Unlock child nodes */
if (H5AC_unprotect(f, dxpl_id, child_class, left_addr, left_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, right_addr, right_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5B2_redistribute2 */
/*-------------------------------------------------------------------------
* Function: H5B2_split2
*
* Purpose: Perform a 2->3 node split
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 9 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_split2(H5F_t *f, hid_t dxpl_id, unsigned depth, H5B2_node_ptr_t *curr_node_ptr,
H5AC_info_t *parent_cache_info, H5B2_internal_t *internal, unsigned idx)
{
const H5AC_class_t *child_class; /* Pointer to child node's class info */
haddr_t left_addr, right_addr; /* Addresses of left & right child nodes */
haddr_t middle_addr; /* Address of middle child node */
void *left_child, *right_child; /* Pointers to left & right child nodes */
void *middle_child; /* Pointer to middle child node */
unsigned *left_nrec, *right_nrec; /* Pointers to left & right child # of records */
unsigned *middle_nrec; /* Pointer to middle child # of records */
uint8_t *left_native, *right_native; /* Pointers to left & right children's native records */
uint8_t *middle_native; /* Pointer to middle child's native records */
H5B2_shared_t *shared; /* B-tree's shared info */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5B2_split2)
HDassert(f);
HDassert(internal);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(internal->shared);
HDassert(shared);
/* Slide records in parent node up one space, to make room for promoted record */
HDmemmove(H5B2_INT_NREC(internal,shared,idx+2),H5B2_INT_NREC(internal,shared,idx+1),shared->type->nrec_size*(internal->nrec-(idx+1)));
HDmemmove(&(internal->node_ptrs[idx+2]),&(internal->node_ptrs[idx+1]),sizeof(H5B2_node_ptr_t)*(internal->nrec-idx));
/* Check for the kind of B-tree node to split */
if(depth>1) {
HDfprintf(stderr,"%s: splitting internal node! (need to handle node_ptrs)\n",FUNC);
HGOTO_ERROR(H5E_BTREE, H5E_CANTSPLIT, FAIL, "unable to split nodes")
} /* end if */
else {
H5B2_leaf_t *left_leaf; /* Pointer to left leaf node */
H5B2_leaf_t *right_leaf; /* Pointer to right leaf node */
H5B2_leaf_t *middle_leaf; /* Pointer to middle leaf node */
/* Setup information for unlocking child nodes */
child_class = H5AC_BT2_LEAF;
left_addr = internal->node_ptrs[idx].addr;
right_addr = internal->node_ptrs[idx+2].addr;
/* Lock left & right B-tree child nodes */
if (NULL == (left_leaf = H5AC_protect(f, dxpl_id, child_class, left_addr, &(internal->node_ptrs[idx].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (right_leaf = H5AC_protect(f, dxpl_id, child_class, right_addr, &(internal->node_ptrs[idx+2].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* Create new empty "middle" leaf node */
internal->node_ptrs[idx+1].all_nrec=internal->node_ptrs[idx+1].node_nrec=0;
if(H5B2_create_leaf(f, dxpl_id, internal->shared, &(internal->node_ptrs[idx+1]))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "unable to create new leaf node")
/* Setup information for unlocking middle child node */
middle_addr = internal->node_ptrs[idx+1].addr;
/* Lock "middle" leaf node */
if (NULL == (middle_leaf = H5AC_protect(f, dxpl_id, child_class, middle_addr, &(internal->node_ptrs[idx+1].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* More setup for accessing child node information */
left_child = left_leaf;
middle_child = middle_leaf;
right_child = right_leaf;
left_nrec = &(left_leaf->nrec);
middle_nrec = &(middle_leaf->nrec);
right_nrec = &(right_leaf->nrec);
left_native = left_leaf->leaf_native;
middle_native = middle_leaf->leaf_native;
right_native = right_leaf->leaf_native;
/* Mark child nodes as dirty now */
left_leaf->cache_info.is_dirty = TRUE;
middle_leaf->cache_info.is_dirty = TRUE;
right_leaf->cache_info.is_dirty = TRUE;
} /* end else */
/* Sanity check */
HDassert(*left_nrec==*right_nrec);
/* Redistribute records */
{
/* Compute new # of records in each node */
unsigned total_nrec = *left_nrec + *right_nrec + 1;
unsigned new_middle_nrec = (total_nrec-2)/3;
unsigned new_left_nrec = ((total_nrec-2)-new_middle_nrec)/2;
unsigned new_right_nrec = (total_nrec-2)-(new_left_nrec+new_middle_nrec);
/* Fill new middle node */
{
unsigned curr_middle_idx=0;
/* Copy record(s) from left node to proper location */
if(new_left_nrec<(*left_nrec-1)) {
curr_middle_idx=*left_nrec-(new_left_nrec+1);
HDmemcpy(H5B2_NAT_NREC(middle_native,shared,0),H5B2_NAT_NREC(left_native,shared,(new_left_nrec+1)),shared->type->nrec_size*curr_middle_idx);
} /* end if */
/* Copy record from parent node to proper location */
HDmemcpy(H5B2_NAT_NREC(middle_native,shared,curr_middle_idx),H5B2_INT_NREC(internal,shared,idx),shared->type->nrec_size);
curr_middle_idx++;
/* Copy record(s) from right node to proper location */
if(new_right_nrec<(*right_nrec-1))
HDmemcpy(H5B2_NAT_NREC(middle_native,shared,curr_middle_idx),H5B2_NAT_NREC(right_native,shared,0),shared->type->nrec_size*(*right_nrec-(new_right_nrec+1)));
} /* end block */
/* Update # of records in middle node */
*middle_nrec=new_middle_nrec;
/* Promote records to parent node from left & right nodes */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx),H5B2_NAT_NREC(left_native,shared,new_left_nrec),shared->type->nrec_size);
HDmemcpy(H5B2_INT_NREC(internal,shared,idx+1),H5B2_NAT_NREC(right_native,shared,(*right_nrec-(new_right_nrec+1))),shared->type->nrec_size);
/* Update # of records in left node */
*left_nrec = new_left_nrec;
/* Slide records in right node to proper position */
HDmemmove(H5B2_NAT_NREC(right_native,shared,0),H5B2_NAT_NREC(right_native,shared,(*right_nrec-new_right_nrec)),shared->type->nrec_size*new_right_nrec);
/* Update # of records in right node */
*right_nrec = new_right_nrec;
} /* end block */
/* Update # of records in parent node */
/* Hmm, this value for 'all_rec' wont' be right for internal nodes... */
internal->node_ptrs[idx].all_nrec = internal->node_ptrs[idx].node_nrec = *left_nrec;
internal->node_ptrs[idx+1].all_nrec = internal->node_ptrs[idx+1].node_nrec = *middle_nrec;
internal->node_ptrs[idx+2].all_nrec = internal->node_ptrs[idx+2].node_nrec = *right_nrec;
internal->nrec++;
/* Mark parent as dirty */
internal->cache_info.is_dirty = TRUE;
/* Update grandparent info */
curr_node_ptr->node_nrec++;
/* Mark grandparent as dirty */
parent_cache_info->is_dirty = TRUE;
/* Unlock child nodes */
if (H5AC_unprotect(f, dxpl_id, child_class, left_addr, left_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, middle_addr, middle_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, right_addr, right_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5B2_split2 */
/*-------------------------------------------------------------------------
* Function: H5B2_redistribute3
*
* Purpose: Redistribute records between three nodes
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 9 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_redistribute3(H5F_t *f, hid_t dxpl_id, unsigned depth, H5B2_internal_t *internal, unsigned idx)
{
const H5AC_class_t *child_class; /* Pointer to child node's class info */
haddr_t left_addr, right_addr; /* Addresses of left & right child nodes */
haddr_t middle_addr; /* Address of middle child node */
void *left_child, *right_child; /* Pointers to child nodes */
void *middle_child; /* Pointers to middle child node */
unsigned *left_nrec, *right_nrec; /* Pointers to child # of records */
unsigned *middle_nrec; /* Pointers to middle child # of records */
uint8_t *left_native, *right_native; /* Pointers to childs' native records */
uint8_t *middle_native; /* Pointers to middle child's native records */
H5B2_shared_t *shared; /* B-tree's shared info */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5B2_redistribute3)
HDassert(f);
HDassert(internal);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(internal->shared);
HDassert(shared);
/* Check for the kind of B-tree node to redistribute */
if(depth>1) {
HDfprintf(stderr,"%s: redistributing internal node! (need to handle node_ptrs)\n",FUNC);
HGOTO_ERROR(H5E_BTREE, H5E_CANTREDISTRIBUTE, FAIL, "unable to redistribute records")
} /* end if */
else {
H5B2_leaf_t *left_leaf; /* Pointer to left leaf node */
H5B2_leaf_t *middle_leaf; /* Pointer to middle leaf node */
H5B2_leaf_t *right_leaf; /* Pointer to right leaf node */
/* Setup information for unlocking child nodes */
child_class = H5AC_BT2_LEAF;
left_addr = internal->node_ptrs[idx-1].addr;
middle_addr = internal->node_ptrs[idx].addr;
right_addr = internal->node_ptrs[idx+1].addr;
/* Lock B-tree child nodes */
if (NULL == (left_leaf = H5AC_protect(f, dxpl_id, child_class, left_addr, &(internal->node_ptrs[idx-1].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (middle_leaf = H5AC_protect(f, dxpl_id, child_class, middle_addr, &(internal->node_ptrs[idx].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (right_leaf = H5AC_protect(f, dxpl_id, child_class, right_addr, &(internal->node_ptrs[idx+1].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* More setup for child nodes */
left_child = left_leaf;
middle_child = middle_leaf;
right_child = right_leaf;
left_nrec = &(left_leaf->nrec);
middle_nrec = &(middle_leaf->nrec);
right_nrec = &(right_leaf->nrec);
left_native = left_leaf->leaf_native;
middle_native = middle_leaf->leaf_native;
right_native = right_leaf->leaf_native;
/* Mark child nodes as dirty now */
left_leaf->cache_info.is_dirty = TRUE;
middle_leaf->cache_info.is_dirty = TRUE;
right_leaf->cache_info.is_dirty = TRUE;
} /* end else */
/* Redistribute records */
{
/* Compute new # of records in each node */
unsigned total_nrec = *left_nrec + *middle_nrec + *right_nrec + 2;
unsigned new_middle_nrec = (total_nrec-2)/3;
unsigned new_left_nrec = ((total_nrec-2)-new_middle_nrec)/2;
unsigned new_right_nrec = (total_nrec-2)-(new_left_nrec+new_middle_nrec);
/* Move records into left node */
if(new_left_nrec>*left_nrec) {
unsigned moved_middle_nrec=0; /* Number of records moved into left node */
/* Move left parent record down to left node */
HDmemcpy(H5B2_NAT_NREC(left_native,shared,*left_nrec),H5B2_INT_NREC(internal,shared,idx-1),shared->type->nrec_size);
/* Move records from middle node into left node */
if((new_left_nrec-1)>*left_nrec) {
moved_middle_nrec = new_left_nrec-(*left_nrec+1);
HDmemcpy(H5B2_NAT_NREC(left_native,shared,*left_nrec+1),H5B2_NAT_NREC(middle_native,shared,0),shared->type->nrec_size*moved_middle_nrec);
} /* end if */
/* Move record from middle node up to parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx-1),H5B2_NAT_NREC(middle_native,shared,moved_middle_nrec),shared->type->nrec_size);
moved_middle_nrec++;
/* Slide records in middle node down */
HDmemmove(H5B2_NAT_NREC(middle_native,shared,0),H5B2_NAT_NREC(middle_native,shared,moved_middle_nrec),shared->type->nrec_size*(*middle_nrec-moved_middle_nrec));
} /* end if */
/* Move records into right node */
if(new_right_nrec>*right_nrec) {
/* Slide records in right node up */
HDmemmove(H5B2_NAT_NREC(right_native,shared,(new_right_nrec-*right_nrec)),H5B2_NAT_NREC(right_native,shared,0),shared->type->nrec_size*(*right_nrec));
/* Move right parent record down to right node */
HDmemcpy(H5B2_NAT_NREC(right_native,shared,(new_right_nrec-(*right_nrec+1))),H5B2_INT_NREC(internal,shared,idx),shared->type->nrec_size);
/* Move records from middle node into right node */
if((new_right_nrec-1)>*right_nrec)
HDmemcpy(H5B2_NAT_NREC(right_native,shared,0),H5B2_NAT_NREC(middle_native,shared,new_middle_nrec+1),shared->type->nrec_size*(new_right_nrec-(*right_nrec+1)));
/* Move record from middle node up to parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx),H5B2_NAT_NREC(middle_native,shared,new_middle_nrec),shared->type->nrec_size);
} /* end if */
/* Update # of records in nodes */
*left_nrec = new_left_nrec;
*middle_nrec = new_middle_nrec;
*right_nrec = new_right_nrec;
} /* end block */
/* Update # of records in child nodes */
/* Hmm, this value for 'all_rec' wont' be right for internal nodes... */
internal->node_ptrs[idx-1].all_nrec = internal->node_ptrs[idx-1].node_nrec = *left_nrec;
internal->node_ptrs[idx].all_nrec = internal->node_ptrs[idx].node_nrec = *middle_nrec;
internal->node_ptrs[idx+1].all_nrec = internal->node_ptrs[idx+1].node_nrec = *right_nrec;
/* Mark parent as dirty */
internal->cache_info.is_dirty = TRUE;
/* Unlock child nodes */
if (H5AC_unprotect(f, dxpl_id, child_class, left_addr, left_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, middle_addr, middle_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, right_addr, right_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5B2_redistribute3 */
/*-------------------------------------------------------------------------
* Function: H5B2_split3
*
* Purpose: Perform a 3->4 node split
*
* Return: Success: Non-negative
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 10 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_split3(H5F_t *f, hid_t dxpl_id, unsigned depth, H5B2_node_ptr_t *curr_node_ptr,
H5AC_info_t *parent_cache_info, H5B2_internal_t *internal, unsigned idx)
{
const H5AC_class_t *child_class; /* Pointer to child node's class info */
haddr_t left_addr, right_addr; /* Addresses of left & right child nodes */
haddr_t middle_addr; /* Address of middle child node */
haddr_t new_addr; /* Address of new child node */
void *left_child, *right_child; /* Pointers to left & right child nodes */
void *middle_child; /* Pointer to middle child node */
void *new_child; /* Pointer to new child node */
unsigned *left_nrec, *right_nrec; /* Pointers to left & right child # of records */
unsigned *middle_nrec; /* Pointer to middle child # of records */
unsigned *new_nrec; /* Pointer to new child # of records */
uint8_t *left_native, *right_native; /* Pointers to left & right children's native records */
uint8_t *middle_native; /* Pointer to middle child's native records */
uint8_t *new_native; /* Pointer to new child's native records */
H5B2_shared_t *shared; /* B-tree's shared info */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5B2_split3)
HDassert(f);
HDassert(internal);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(internal->shared);
HDassert(shared);
/* Slide records in parent node up one space, to make room for promoted record */
HDmemmove(H5B2_INT_NREC(internal,shared,idx+2),H5B2_INT_NREC(internal,shared,idx+1),shared->type->nrec_size*(internal->nrec-(idx+1)));
HDmemmove(&(internal->node_ptrs[idx+2]),&(internal->node_ptrs[idx+1]),sizeof(H5B2_node_ptr_t)*(internal->nrec-idx));
/* Check for the kind of B-tree node to split */
if(depth>1) {
HDfprintf(stderr,"%s: splitting internal node! (need to handle node_ptrs)\n",FUNC);
HGOTO_ERROR(H5E_BTREE, H5E_CANTSPLIT, FAIL, "unable to split nodes")
} /* end if */
else {
H5B2_leaf_t *left_leaf; /* Pointer to left leaf node */
H5B2_leaf_t *right_leaf; /* Pointer to right leaf node */
H5B2_leaf_t *middle_leaf; /* Pointer to middle leaf node */
H5B2_leaf_t *new_leaf; /* Pointer to new leaf node */
/* Setup information for unlocking child nodes */
child_class = H5AC_BT2_LEAF;
left_addr = internal->node_ptrs[idx-1].addr;
middle_addr = internal->node_ptrs[idx].addr;
right_addr = internal->node_ptrs[idx+2].addr;
/* Lock left & right B-tree child nodes */
if (NULL == (left_leaf = H5AC_protect(f, dxpl_id, child_class, left_addr, &(internal->node_ptrs[idx-1].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (middle_leaf = H5AC_protect(f, dxpl_id, child_class, middle_addr, &(internal->node_ptrs[idx].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
if (NULL == (right_leaf = H5AC_protect(f, dxpl_id, child_class, right_addr, &(internal->node_ptrs[idx+2].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* Create new empty leaf node */
internal->node_ptrs[idx+1].all_nrec=internal->node_ptrs[idx+1].node_nrec=0;
if(H5B2_create_leaf(f, dxpl_id, internal->shared, &(internal->node_ptrs[idx+1]))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "unable to create new leaf node")
/* Setup information for unlocking middle child node */
new_addr = internal->node_ptrs[idx+1].addr;
/* Lock "new" leaf node */
if (NULL == (new_leaf = H5AC_protect(f, dxpl_id, child_class, new_addr, &(internal->node_ptrs[idx+1].node_nrec), internal->shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* More setup for accessing child node information */
left_child = left_leaf;
middle_child = middle_leaf;
new_child = new_leaf;
right_child = right_leaf;
left_nrec = &(left_leaf->nrec);
middle_nrec = &(middle_leaf->nrec);
new_nrec = &(new_leaf->nrec);
right_nrec = &(right_leaf->nrec);
left_native = left_leaf->leaf_native;
middle_native = middle_leaf->leaf_native;
new_native = new_leaf->leaf_native;
right_native = right_leaf->leaf_native;
/* Mark child nodes as dirty now */
left_leaf->cache_info.is_dirty = TRUE;
middle_leaf->cache_info.is_dirty = TRUE;
new_leaf->cache_info.is_dirty = TRUE;
right_leaf->cache_info.is_dirty = TRUE;
} /* end else */
/* Sanity check */
HDassert(*left_nrec==*right_nrec);
HDassert(*left_nrec==*middle_nrec);
/* Redistribute records */
{
/* Compute new # of records in each node */
unsigned total_nrec = *left_nrec + *middle_nrec + *right_nrec + 2;
unsigned new_new_nrec = (total_nrec-3)/4;
unsigned new_middle_nrec = ((total_nrec-3)-new_new_nrec)/3;
unsigned new_left_nrec = ((total_nrec-3)-(new_middle_nrec+new_new_nrec))/2;
unsigned new_right_nrec = (total_nrec-3)-(new_left_nrec+new_middle_nrec+new_new_nrec);
/* Partially fill new node from right node */
{
unsigned right_nrec_move = *right_nrec-new_right_nrec;
/* Move right record down from parent into new node */
HDmemcpy(H5B2_NAT_NREC(new_native,shared,(new_new_nrec-right_nrec_move)),H5B2_INT_NREC(internal,shared,idx),shared->type->nrec_size);
/* Move records from right node to new node */
HDmemcpy(H5B2_NAT_NREC(new_native,shared,((new_new_nrec-right_nrec_move)+1)),H5B2_NAT_NREC(right_native,shared,0),shared->type->nrec_size*(right_nrec_move-1));
/* Move record from right node up to parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx+1),H5B2_NAT_NREC(right_native,shared,(right_nrec_move-1)),shared->type->nrec_size);
/* Slide records in right node down */
HDmemmove(H5B2_NAT_NREC(right_native,shared,0),H5B2_NAT_NREC(right_native,shared,right_nrec_move),shared->type->nrec_size*new_right_nrec);
} /* end block */
/* Finish filling new node from middle node */
{
unsigned new_nrec_move = new_new_nrec-(*right_nrec-new_right_nrec);
/* Move records from middle node to new node */
HDmemcpy(H5B2_NAT_NREC(new_native,shared,0),H5B2_NAT_NREC(middle_native,shared,(*middle_nrec-new_nrec_move)),shared->type->nrec_size*new_nrec_move);
/* Move record from middle node up to parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx),H5B2_NAT_NREC(middle_native,shared,((*middle_nrec-new_nrec_move)-1)),shared->type->nrec_size);
/* Slide records in middle node up */
HDmemmove(H5B2_NAT_NREC(middle_native,shared,(new_middle_nrec-((*middle_nrec-new_nrec_move)-1))),H5B2_NAT_NREC(middle_native,shared,0),shared->type->nrec_size*(*middle_nrec-(new_nrec_move+1)));
} /* end block */
/* Fill middle node from left node */
{
unsigned left_nrec_move = *left_nrec - new_left_nrec;
/* Move record from parent node down to middle node */
HDmemcpy(H5B2_NAT_NREC(middle_native,shared,(left_nrec_move-1)),H5B2_INT_NREC(internal,shared,idx-1),shared->type->nrec_size);
/* Move records from left node to middle node */
HDmemcpy(H5B2_NAT_NREC(middle_native,shared,0),H5B2_NAT_NREC(left_native,shared,(new_left_nrec+1)),shared->type->nrec_size*(left_nrec_move-1));
}
/* Move record from left node to parent node */
HDmemcpy(H5B2_INT_NREC(internal,shared,idx-1),H5B2_NAT_NREC(left_native,shared,new_left_nrec),shared->type->nrec_size);
/* Update # of records in nodes */
*left_nrec = new_left_nrec;
*middle_nrec = new_middle_nrec;
*new_nrec = new_new_nrec;
*right_nrec = new_right_nrec;
} /* end block */
/* Update # of records in parent node */
/* Hmm, this value for 'all_rec' wont' be right for internal nodes... */
internal->node_ptrs[idx-1].all_nrec = internal->node_ptrs[idx-1].node_nrec = *left_nrec;
internal->node_ptrs[idx].all_nrec = internal->node_ptrs[idx].node_nrec = *middle_nrec;
internal->node_ptrs[idx+1].all_nrec = internal->node_ptrs[idx+1].node_nrec = *new_nrec;
internal->node_ptrs[idx+2].all_nrec = internal->node_ptrs[idx+2].node_nrec = *right_nrec;
internal->nrec++;
/* Mark parent as dirty */
internal->cache_info.is_dirty = TRUE;
/* Update grandparent info */
curr_node_ptr->node_nrec++;
/* Mark grandparent as dirty */
parent_cache_info->is_dirty = TRUE;
/* Unlock child nodes */
if (H5AC_unprotect(f, dxpl_id, child_class, left_addr, left_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, middle_addr, middle_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, new_addr, new_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
if (H5AC_unprotect(f, dxpl_id, child_class, right_addr, right_child, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree child node")
done:
FUNC_LEAVE_NOAPI(ret_value);
} /* end H5B2_split3 */
/*-------------------------------------------------------------------------
* Function: H5B2_insert
*
* Purpose: Adds a new record to the B-tree. If the root node of
* the B-tree splits then the B-tree header tracks the new
* root node created.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 2 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5B2_insert(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr,
void *udata)
{
H5B2_t *bt2=NULL; /* Pointer to the B-tree header */
H5RC_t *bt2_shared=NULL; /* Pointer to ref-counter for shared B-tree info */
hbool_t incr_rc=FALSE; /* Flag to indicate that we've incremented the B-tree's shared info reference count */
H5B2_shared_t *shared; /* Pointer to B-tree's shared information */
H5B2_node_ptr_t leaf_ptr; /* Node pointer info for leaf node */
H5B2_leaf_t *leaf=NULL; /* Pointer to leaf node */
int idx; /* Location of record which matches key */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5B2_insert, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(type);
HDassert(H5F_addr_defined(addr));
/* Look up the b-tree header */
if (NULL == (bt2 = H5AC_protect(f, dxpl_id, H5AC_BT2_HDR, addr, type, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree header")
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(bt2->shared);
HDassert(shared);
/* Safely grab pointer to reference counted shared B-tree info, so we can release the B-tree header if necessary */
bt2_shared=bt2->shared;
H5RC_INC(bt2_shared);
incr_rc=TRUE;
/* Check if the root node is allocated yet */
if(!H5F_addr_defined(bt2->root.addr)) {
/* Create root node as leaf node in B-tree */
if(H5B2_create_leaf(f, dxpl_id, bt2_shared, &(bt2->root))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "unable to create root node")
/* Mark B-tree header as dirty, since we updated the address of the root node */
bt2->cache_info.is_dirty = TRUE;
} /* end if */
/* Check if we need to split the root node */
else if((bt2->depth==0 && bt2->root.node_nrec==shared->split_leaf_nrec) ||
(bt2->depth>0 && bt2->root.node_nrec==shared->split_int_nrec)) {
/* Split root node */
if(H5B2_split_root(f, dxpl_id, bt2, bt2_shared)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTSPLIT, FAIL, "unable to split root node")
} /* end if */
/* Check for non-trivial B-tree */
if(bt2->depth>0) {
H5B2_internal_t *internal; /* Pointer to internal node in B-tree */
H5AC_info_t *parent_cache_info; /* Parent node's cache info */
haddr_t parent_addr; /* Address of parent which contain's node pointer to current node */
void *parent_ptr; /* Pointer to parent structure in memory */
H5AC_info_t *curr_cache_info=NULL; /* Current node's cache info */
H5B2_node_ptr_t *curr_node_ptr; /* Pointer to node pointer info for current node (in parent node) */
haddr_t curr_addr=HADDR_UNDEF; /* Address of current node */
void *curr_ptr=NULL; /* Pointer to current structure in memory */
H5B2_node_ptr_t *child_node_ptr=NULL; /* Pointer to node pointer info for child node */
unsigned depth; /* Depth of current node */
/* Track the depth of current node (leaves are depth 0) */
depth=bt2->depth;
/* Set initial "parent" information to the B-tree header */
parent_cache_info=&(bt2->cache_info);
parent_addr=addr;
parent_ptr=bt2;
/* Set initial node pointer for "current" node */
curr_node_ptr=&(bt2->root);
/* Find correct leaf to insert node into */
while(depth>0) {
/* Lock B-tree current node */
if (NULL == (internal = H5AC_protect(f, dxpl_id, H5AC_BT2_INT, curr_node_ptr->addr, &(curr_node_ptr->node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree internal node")
/* Set information for current (root) node */
curr_cache_info=&(internal->cache_info);
curr_addr=curr_node_ptr->addr;
curr_ptr=internal;
/* Locate node pointer for child */
if((idx=H5B2_locate_record(f,dxpl_id,shared->type,internal->nrec,shared->nat_off,internal->int_native,udata))<0)
HGOTO_ERROR(H5E_BTREE, H5E_EXISTS, FAIL, "record is already in B-tree")
/* Get node pointer for child */
child_node_ptr=&(internal->node_ptrs[idx]);
/* Preemptively split/redistribute a node we will enter */
if((depth==1 && child_node_ptr->node_nrec==shared->split_leaf_nrec) ||
(depth>1 && child_node_ptr->node_nrec==shared->split_int_nrec)) {
/* Attempt to redistribute records among children */
if(idx==0) { /* Left-most child */
if((depth==1 && internal->node_ptrs[idx+1].node_nrec<shared->split_leaf_nrec) ||
(depth>1 && internal->node_ptrs[idx+1].node_nrec<shared->split_int_nrec)) {
if(H5B2_redistribute2(f,dxpl_id,depth,internal,(unsigned)idx)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTREDISTRIBUTE, FAIL, "unable to redistribute child node records")
} /* end if */
else {
if(H5B2_split2(f,dxpl_id,depth,curr_node_ptr,parent_cache_info,internal,(unsigned)idx)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTSPLIT, FAIL, "unable to split child node")
} /* end else */
} /* end if */
else if((unsigned)idx==internal->nrec) { /* Right-most child */
if((depth==1 && internal->node_ptrs[idx-1].node_nrec<shared->split_leaf_nrec) ||
(depth>1 && internal->node_ptrs[idx-1].node_nrec<shared->split_int_nrec)) {
if(H5B2_redistribute2(f,dxpl_id,depth,internal,(unsigned)(idx-1))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTREDISTRIBUTE, FAIL, "unable to redistribute child node records")
} /* end if */
else {
if(H5B2_split2(f,dxpl_id,depth,curr_node_ptr,parent_cache_info,internal,(unsigned)(idx-1))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTSPLIT, FAIL, "unable to split child node")
} /* end else */
} /* end if */
else { /* Middle child */
if((depth==1 &&
((internal->node_ptrs[idx+1].node_nrec<shared->split_leaf_nrec) ||
(internal->node_ptrs[idx-1].node_nrec<shared->split_leaf_nrec))) ||
(depth>1 &&
((internal->node_ptrs[idx+1].node_nrec<shared->split_int_nrec) ||
(internal->node_ptrs[idx-1].node_nrec<shared->split_int_nrec)))) {
if(H5B2_redistribute3(f,dxpl_id,depth,internal,(unsigned)idx)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTREDISTRIBUTE, FAIL, "unable to redistribute child node records")
} /* end if */
else {
if(H5B2_split3(f,dxpl_id,depth,curr_node_ptr,parent_cache_info,internal,(unsigned)idx)<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTSPLIT, FAIL, "unable to split child node")
} /* end else */
} /* end else */
/* Locate node pointer for child (after split redistribute) */
/* Actually, this can be easily updated (for 2-node redistrib.) and shouldn't require re-searching */
if((idx=H5B2_locate_record(f,dxpl_id,shared->type,internal->nrec,shared->nat_off,internal->int_native,udata))<0)
HGOTO_ERROR(H5E_BTREE, H5E_EXISTS, FAIL, "record is already in B-tree")
/* Update child_node_ptr (to reflect change in location from split/redistribution) */
child_node_ptr=&(internal->node_ptrs[idx]);
} /* end if */
/* Update record count (in parent) */
curr_node_ptr->all_nrec++;
/* Mark parent node as dirty */
parent_cache_info->is_dirty = TRUE;
/* Unlock parent node (possibly the B-tree header) */
if (H5AC_unprotect(f, dxpl_id, parent_cache_info->type, parent_addr, parent_ptr, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree info")
/* Transition "current" info into "parent" info */
parent_cache_info = curr_cache_info;
parent_addr = curr_addr;
parent_ptr = curr_ptr;
/* Transition "child" node pointer to "current" node pointer */
curr_node_ptr = child_node_ptr;
/* Decrement depth of current node */
depth--;
} /* end while */
/* Update record count for leaf (in current node) */
HDassert(curr_node_ptr);
curr_node_ptr->all_nrec++;
curr_node_ptr->node_nrec++;
/* Mark parent node as dirty */
curr_cache_info->is_dirty = TRUE;
/* Copy node pointer info for leaf */
leaf_ptr = *curr_node_ptr;
/* Release current node */
if (H5AC_unprotect(f, dxpl_id, curr_cache_info->type, curr_addr, curr_ptr, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree node")
} /* end if */
else {
/* Update record count for root node */
bt2->root.all_nrec++;
bt2->root.node_nrec++;
/* Mark parent node as dirty */
bt2->cache_info.is_dirty = TRUE;
/* Copy node pointer info for leaf */
leaf_ptr = bt2->root;
/* Release parent node */
if (H5AC_unprotect(f, dxpl_id, H5AC_BT2_HDR, addr, bt2, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree header info")
bt2=NULL;
} /* end else */
/* Must have a leaf node with enough space to insert a record now */
HDassert(H5F_addr_defined(leaf_ptr.addr));
HDassert((leaf_ptr.node_nrec-1)<shared->split_leaf_nrec); /* node pointer to leaf has already been incremented */
/* Look up the B-tree leaf node */
if (NULL == (leaf = H5AC_protect(f, dxpl_id, H5AC_BT2_LEAF, leaf_ptr.addr, &(leaf_ptr.node_nrec), bt2_shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* Sanity check number of records */
HDassert(leaf_ptr.all_nrec==leaf_ptr.node_nrec);
HDassert(leaf->nrec==(leaf_ptr.node_nrec-1)); /* node pointer to leaf has already been incremented */
/* Check for inserting into empty leaf */
if(leaf->nrec==0)
idx=0;
else {
/* Sanity check for the leaf node being full */
HDassert(leaf->nrec!=shared->split_leaf_nrec);
/* Find correct location to insert this record and make room for it */
if((idx=H5B2_locate_record(f,dxpl_id,shared->type,leaf->nrec,shared->nat_off,leaf->leaf_native,udata))<0) {
/* Release the B-tree leaf node */
if (H5AC_unprotect(f, dxpl_id, H5AC_BT2_LEAF, leaf_ptr.addr, leaf, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree leaf node")
HGOTO_ERROR(H5E_BTREE, H5E_EXISTS, FAIL, "record is already in B-tree")
} /* end if */
/* Make room for new record */
if((unsigned)idx<leaf->nrec)
HDmemmove(H5B2_LEAF_NREC(leaf,shared,idx+1),H5B2_LEAF_NREC(leaf,shared,idx),shared->type->nrec_size*(leaf->nrec-idx));
} /* end else */
/* Make callback to store record in native form */
if((shared->type->store)(f,dxpl_id,udata,H5B2_LEAF_NREC(leaf,shared,idx))<0) {
/* Release the B-tree leaf node */
if (H5AC_unprotect(f, dxpl_id, H5AC_BT2_LEAF, leaf_ptr.addr, leaf, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree leaf node")
HGOTO_ERROR(H5E_BTREE, H5E_CANTINSERT, FAIL, "unable to insert record into leaf node")
} /* end if */
/* Update number of records in node */
leaf->nrec++;
/* Mark leaf node as dirty also */
leaf->cache_info.is_dirty = TRUE;
/* Release the B-tree leaf node */
if (H5AC_unprotect(f, dxpl_id, H5AC_BT2_LEAF, leaf_ptr.addr, leaf, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree leaf node")
done:
/* Check if we need to decrement the reference count for the B-tree's shared info */
if(incr_rc)
H5RC_DEC(bt2_shared);
FUNC_LEAVE_NOAPI(ret_value)
} /* H5B2_insert() */
/*-------------------------------------------------------------------------
* Function: H5B2_create_leaf
*
* Purpose: Creates empty leaf node of a B-tree and update node pointer
* to point to it.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 2 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_create_leaf(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared, H5B2_node_ptr_t *node_ptr)
{
H5B2_leaf_t *leaf=NULL; /* Pointer to new leaf node created */
H5B2_shared_t *shared; /* Shared B-tree information */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5B2_create_leaf, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(bt2_shared);
HDassert(node_ptr);
/* Allocate memory for leaf information */
if (NULL==(leaf = H5FL_MALLOC(H5B2_leaf_t)))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree leaf info")
/* Set metadata cache info */
HDmemset(&leaf->cache_info,0,sizeof(H5AC_info_t));
leaf->cache_info.is_dirty = TRUE;
/* Share common B-tree information */
leaf->shared = bt2_shared;
H5RC_INC(leaf->shared);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(leaf->shared);
HDassert(shared);
/* Allocate space for the native keys in memory */
if((leaf->leaf_native=H5FL_FAC_MALLOC(shared->leaf_fac))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree leaf native keys")
#ifdef H5_USING_PURIFY
HDmemset(leaf->leaf_native,0,shared->type->nrec_size*shared->leaf_nrec);
#endif /* H5_USING_PURIFY */
/* Set number of records */
leaf->nrec=0;
/* Allocate space on disk for the leaf */
if (HADDR_UNDEF==(node_ptr->addr=H5MF_alloc(f, H5FD_MEM_BTREE, dxpl_id, (hsize_t)shared->node_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for B-tree leaf node")
/* Cache the new B-tree node */
if (H5AC_set(f, dxpl_id, H5AC_BT2_LEAF, node_ptr->addr, leaf, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "can't add B-tree leaf to cache")
done:
if (ret_value<0) {
if (leaf)
(void)H5B2_cache_leaf_dest(f,leaf);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* H5B2_create_leaf() */
/*-------------------------------------------------------------------------
* Function: H5B2_create_internal
*
* Purpose: Creates empty internal node of a B-tree and update node pointer
* to point to it.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 3 2005
*
*-------------------------------------------------------------------------
*/
static herr_t
H5B2_create_internal(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared, H5B2_node_ptr_t *node_ptr)
{
H5B2_internal_t *internal=NULL; /* Pointer to new internal node created */
H5B2_shared_t *shared; /* Shared B-tree information */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5B2_create_internal, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(bt2_shared);
HDassert(node_ptr);
/* Allocate memory for internal node information */
if (NULL==(internal = H5FL_MALLOC(H5B2_internal_t)))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree internal info")
/* Set metadata cache info */
HDmemset(&internal->cache_info,0,sizeof(H5AC_info_t));
internal->cache_info.is_dirty = TRUE;
/* Share common B-tree information */
internal->shared = bt2_shared;
H5RC_INC(internal->shared);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(internal->shared);
HDassert(shared);
/* Allocate space for the native keys in memory */
if((internal->int_native=H5FL_FAC_MALLOC(shared->int_fac))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree internal native keys")
#ifdef H5_USING_PURIFY
HDmemset(internal->int_native,0,shared->type->nrec_size*shared->internal_nrec);
#endif /* H5_USING_PURIFY */
/* Allocate space for the node pointers in memory */
if((internal->node_ptrs=H5FL_FAC_MALLOC(shared->node_ptr_fac))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed for B-tree internal node pointers")
#ifdef H5_USING_PURIFY
HDmemset(internal->node_ptrs,0,sizeof(H5B2_node_ptr_t)*(shared->internal_nrec+1));
#endif /* H5_USING_PURIFY */
/* Set number of records */
internal->nrec=0;
/* Allocate space on disk for the internal node */
if (HADDR_UNDEF==(node_ptr->addr=H5MF_alloc(f, H5FD_MEM_BTREE, dxpl_id, (hsize_t)shared->node_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for B-tree internal node")
/* Cache the new B-tree node */
if (H5AC_set(f, dxpl_id, H5AC_BT2_INT, node_ptr->addr, internal, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTINIT, FAIL, "can't add B-tree internal node to cache")
done:
if (ret_value<0) {
if (internal)
(void)H5B2_cache_internal_dest(f,internal);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* H5B2_create_internal() */
/*-------------------------------------------------------------------------
* Function: H5B2_iterate_node
*
* Purpose: Iterate over all the records from a B-tree node, in "in-order"
* order, making a callback for each record.
*
* If the callback returns non-zero, the iteration breaks out
* without finishing all the records.
*
* Return: Value from callback, non-negative on success, negative on error
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 11 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5B2_iterate_node(H5F_t *f, hid_t dxpl_id, H5RC_t *bt2_shared, unsigned depth,
const H5B2_node_ptr_t *curr_node, H5B2_operator_t op, void *op_data)
{
H5B2_shared_t *shared; /* Pointer to B-tree's shared information */
const H5AC_class_t *curr_node_class=NULL; /* Pointer to current node's class info */
void *node=NULL; /* Pointers to current node */
uint8_t *native; /* Pointers to node's native records */
H5B2_node_ptr_t *node_ptrs=NULL; /* Pointers to node's node pointers */
unsigned u; /* Local index */
herr_t ret_value = H5B2_ITER_CONT;
FUNC_ENTER_NOAPI(H5B2_iterate_node, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(bt2_shared);
HDassert(curr_node);
HDassert(op);
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(bt2_shared);
HDassert(shared);
if(depth>0) {
H5B2_internal_t *internal; /* Pointer to internal node */
/* Lock the current B-tree node */
if (NULL == (internal = H5AC_protect(f, dxpl_id, H5AC_BT2_INT, curr_node->addr, &(curr_node->node_nrec), shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree internal node")
/* Set up information about current node */
curr_node_class = H5AC_BT2_INT;
node = internal;
native = internal->int_native;
node_ptrs = internal->node_ptrs;
} /* end if */
else {
H5B2_leaf_t *leaf; /* Pointer to leaf node */
/* Lock the current B-tree node */
if (NULL == (leaf = H5AC_protect(f, dxpl_id, H5AC_BT2_LEAF, curr_node->addr, &(curr_node->node_nrec), shared, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree leaf node")
/* Set up information about current node */
curr_node_class = H5AC_BT2_LEAF;
node = leaf;
native = leaf->leaf_native;
} /* end else */
/* Iterate through records */
for(u=0, ret_value; u<curr_node->node_nrec && !ret_value; u++) {
/* Descend into child node, if current node is an internal node */
if(depth>0) {
if((ret_value = H5B2_iterate_node(f,dxpl_id,bt2_shared,depth-1,&(node_ptrs[u]),op,op_data))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTLIST, FAIL, "node iteration failed")
} /* end if */
/* Make callback for current record */
if ((ret_value = (op)(H5B2_NAT_NREC(native,shared,u), op_data)) <0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTLIST, FAIL, "iterator function failed")
} /* end for */
/* Descend into last child node, if current node is an internal node */
if(depth>0) {
if((ret_value = H5B2_iterate_node(f,dxpl_id,bt2_shared,depth-1,&(node_ptrs[u]),op,op_data))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTLIST, FAIL, "node iteration failed")
} /* end if */
done:
/* Unlock current node */
if(node)
if (H5AC_unprotect(f, dxpl_id, curr_node_class, curr_node->addr, node, H5AC__NO_FLAGS_SET) < 0)
HDONE_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree node")
FUNC_LEAVE_NOAPI(ret_value)
} /* H5B2_iterate_node() */
/*-------------------------------------------------------------------------
* Function: H5B2_iterate
*
* Purpose: Iterate over all the records in the B-tree, in "in-order"
* order, making a callback for each record.
*
* If the callback returns non-zero, the iteration breaks out
* without finishing all the records.
*
* Return: Value from callback, non-negative on success, negative on error
*
* Programmer: Quincey Koziol
* koziol@ncsa.uiuc.edu
* Feb 11 2005
*
*-------------------------------------------------------------------------
*/
herr_t
H5B2_iterate(H5F_t *f, hid_t dxpl_id, const H5B2_class_t *type, haddr_t addr,
H5B2_operator_t op, void *op_data)
{
H5B2_t *bt2=NULL; /* Pointer to the B-tree header */
H5RC_t *bt2_shared=NULL; /* Pointer to ref-counter for shared B-tree info */
hbool_t incr_rc=FALSE; /* Flag to indicate that we've incremented the B-tree's shared info reference count */
H5B2_shared_t *shared; /* Pointer to B-tree's shared information */
H5B2_node_ptr_t root_ptr; /* Node pointer info for root node */
unsigned depth; /* Current depth of the tree */
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5B2_iterate, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(type);
HDassert(H5F_addr_defined(addr));
HDassert(op);
/* Look up the B-tree header */
if (NULL == (bt2 = H5AC_protect(f, dxpl_id, H5AC_BT2_HDR, addr, type, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_BTREE, H5E_CANTLOAD, FAIL, "unable to load B-tree header")
/* Get the pointer to the shared B-tree info */
shared=H5RC_GET_OBJ(bt2->shared);
HDassert(shared);
/* Safely grab pointer to reference counted shared B-tree info, so we can release the B-tree header if necessary */
bt2_shared=bt2->shared;
H5RC_INC(bt2_shared);
incr_rc=TRUE;
/* Make copy of the root node pointer */
root_ptr = bt2->root;
/* Current depth of the tree */
depth=bt2->depth;
/* Release header */
if (H5AC_unprotect(f, dxpl_id, H5AC_BT2_HDR, addr, bt2, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_BTREE, H5E_PROTECT, FAIL, "unable to release B-tree header info")
bt2=NULL;
/* Iterate through records */
if(root_ptr.node_nrec>0) {
/* Iterate through nodes */
if((ret_value=H5B2_iterate_node(f,dxpl_id,bt2_shared,depth,&root_ptr,op,op_data))<0)
HGOTO_ERROR(H5E_BTREE, H5E_CANTLIST, FAIL, "node iteration failed")
} /* end if */
done:
/* Check if we need to decrement the reference count for the B-tree's shared info */
if(incr_rc)
H5RC_DEC(bt2_shared);
FUNC_LEAVE_NOAPI(ret_value)
} /* H5B2_iterate() */
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