summaryrefslogtreecommitdiffstats
path: root/src/H5Ddeprec.c
blob: d23df6940b2026af05f171ff07c9145064b5a3b5 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by The HDF Group.                                               *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the files COPYING and Copyright.html.  COPYING can be found at the root   *
 * of the source code distribution tree; Copyright.html can be found at the  *
 * root level of an installed copy of the electronic HDF5 document set and   *
 * is linked from the top-level documents page.  It can also be found at     *
 * http://hdfgroup.org/HDF5/doc/Copyright.html.  If you do not have          *
 * access to either file, you may request a copy from help@hdfgroup.org.     *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

/*-------------------------------------------------------------------------
 *
 * Created:	H5Ddeprec.c
 *		April 5 2007
 *		Quincey Koziol <koziol@hdfgroup.org>
 *
 * Purpose:	Deprecated functions from the H5D interface.  These
 *              functions are here for compatibility purposes and may be
 *              removed in the future.  Applications should switch to the
 *              newer APIs.
 *
 *-------------------------------------------------------------------------
 */

/****************/
/* Module Setup */
/****************/

#define H5D_PACKAGE		/*suppress error about including H5Dpkg   */

/* Interface initialization */
#define H5_INTERFACE_INIT_FUNC	H5D_init_deprec_interface


/***********/
/* Headers */
/***********/
#include "H5private.h"		/* Generic Functions			*/
#include "H5Dpkg.h"		/* Datasets 				*/
#include "H5Eprivate.h"		/* Error handling		  	*/
#include "H5Iprivate.h"		/* IDs			  		*/


/****************/
/* Local Macros */
/****************/


/******************/
/* Local Typedefs */
/******************/


/********************/
/* Package Typedefs */
/********************/


/********************/
/* Local Prototypes */
/********************/

#ifndef H5_NO_DEPRECATED_SYMBOLS
static herr_t H5D_extend(H5D_t *dataset, const hsize_t *size, hid_t dxpl_id);
#endif /* H5_NO_DEPRECATED_SYMBOLS */


/*********************/
/* Package Variables */
/*********************/


/*****************************/
/* Library Private Variables */
/*****************************/


/*******************/
/* Local Variables */
/*******************/



/*--------------------------------------------------------------------------
NAME
   H5D_init_deprec_interface -- Initialize interface-specific information
USAGE
    herr_t H5D_init_deprec_interface()
RETURNS
    Non-negative on success/Negative on failure
DESCRIPTION
    Initializes any interface-specific data or routines.  (Just calls
    H5D_init() currently).

--------------------------------------------------------------------------*/
static herr_t
H5D_init_deprec_interface(void)
{
    FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5D_init_deprec_interface)

    FUNC_LEAVE_NOAPI(H5D_init())
} /* H5D_init_deprec_interface() */

#ifndef H5_NO_DEPRECATED_SYMBOLS

/*-------------------------------------------------------------------------
 * Function:	H5Dcreate1
 *
 * Purpose:	Creates a new dataset named NAME at LOC_ID, opens the
 *		dataset for access, and associates with that dataset constant
 *		and initial persistent properties including the type of each
 *		datapoint as stored in the file (TYPE_ID), the size of the
 *		dataset (SPACE_ID), and other initial miscellaneous
 *		properties (DCPL_ID).
 *
 *		All arguments are copied into the dataset, so the caller is
 *		allowed to derive new types, data spaces, and creation
 *		parameters from the old ones and reuse them in calls to
 *		create other datasets.
 *
 * Return:	Success:	The object ID of the new dataset.  At this
 *				point, the dataset is ready to receive its
 *				raw data.  Attempting to read raw data from
 *				the dataset will probably return the fill
 *				value.	The dataset should be closed when
 *				the caller is no longer interested in it.
 *
 *		Failure:	FAIL
 *
 * Programmer:	Robb Matzke
 *		Wednesday, December  3, 1997
 *
 *-------------------------------------------------------------------------
 */
hid_t
H5Dcreate1(hid_t loc_id, const char *name, hid_t type_id, hid_t space_id,
	  hid_t dcpl_id)
{
    H5G_loc_t	    loc;                /* Object location to insert dataset into */
    H5D_t	   *dset = NULL;        /* New dataset's info */
    const H5S_t    *space;              /* Dataspace for dataset */
    hid_t           ret_value;          /* Return value */

    FUNC_ENTER_API(H5Dcreate1, FAIL)
    H5TRACE5("i", "i*siii", loc_id, name, type_id, space_id, dcpl_id);

    /* Check arguments */
    if(H5G_loc(loc_id, &loc) < 0)
	HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location ID")
    if(!name || !*name)
	HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name")
    if(H5I_DATATYPE != H5I_get_type(type_id))
	HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a datatype ID")
    if(NULL == (space = H5I_object_verify(space_id,H5I_DATASPACE)))
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace ID")
    if(H5P_DEFAULT == dcpl_id)
        dcpl_id = H5P_DATASET_CREATE_DEFAULT;
    else
        if(TRUE != H5P_isa_class(dcpl_id, H5P_DATASET_CREATE))
            HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not dataset create property list ID")

    /* Build and open the new dataset */
    if(NULL == (dset = H5D_create_named(&loc, name, type_id, space,
            H5P_LINK_CREATE_DEFAULT, dcpl_id, H5P_DATASET_ACCESS_DEFAULT, H5AC_dxpl_id)))
	HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to create dataset")

    /* Register the new dataset to get an ID for it */
    if((ret_value = H5I_register(H5I_DATASET, dset)) < 0)
	HGOTO_ERROR(H5E_DATASET, H5E_CANTREGISTER, FAIL, "unable to register dataset")

done:
    if(ret_value < 0)
        if(dset && H5D_close(dset) < 0)
            HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, FAIL, "unable to release dataset")

    FUNC_LEAVE_API(ret_value)
} /* end H5Dcreate1() */


/*-------------------------------------------------------------------------
 * Function:	H5Dopen1
 *
 * Purpose:	Finds a dataset named NAME at LOC_ID, opens it, and returns
 *		its ID.	 The dataset should be close when the caller is no
 *		longer interested in it.
 *
 * Note:	Deprecated in favor of H5Dopen2
 *
 * Return:	Success:	A new dataset ID
 *		Failure:	FAIL
 *
 * Programmer:	Robb Matzke
 *		Thursday, December  4, 1997
 *
 *-------------------------------------------------------------------------
 */
hid_t
H5Dopen1(hid_t loc_id, const char *name)
{
    H5D_t       *dset = NULL;
    H5G_loc_t	 loc;		        /* Object location of group */
    H5G_loc_t	 dset_loc;		/* Object location of dataset */
    H5G_name_t   path;            	/* Dataset group hier. path */
    H5O_loc_t    oloc;            	/* Dataset object location */
    H5O_type_t   obj_type;              /* Type of object at location */
    hbool_t      loc_found = FALSE;     /* Location at 'name' found */
    hid_t        dxpl_id = H5AC_dxpl_id;    /* dxpl to use to open datset */
    hid_t        ret_value;

    FUNC_ENTER_API(H5Dopen1, FAIL)
    H5TRACE2("i", "i*s", loc_id, name);

    /* Check args */
    if(H5G_loc(loc_id, &loc) < 0)
        HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location")
    if(!name || !*name)
        HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no name")

    /* Set up dataset location to fill in */
    dset_loc.oloc = &oloc;
    dset_loc.path = &path;
    H5G_loc_reset(&dset_loc);

    /* Find the dataset object */
    if(H5G_loc_find(&loc, name, &dset_loc, H5P_DEFAULT, dxpl_id) < 0)
        HGOTO_ERROR(H5E_DATASET, H5E_NOTFOUND, FAIL, "not found")
    loc_found = TRUE;

    /* Check that the object found is the correct type */
    if(H5O_obj_type(&oloc, &obj_type, dxpl_id) < 0)
        HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, FAIL, "can't get object type")
    if(obj_type != H5O_TYPE_DATASET)
        HGOTO_ERROR(H5E_DATASET, H5E_BADTYPE, FAIL, "not a dataset")

    /* Open the dataset */
    if((dset = H5D_open(&dset_loc, dxpl_id)) == NULL)
        HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "can't open dataset")

    /* Register an atom for the dataset */
    if((ret_value = H5I_register(H5I_DATASET, dset)) < 0)
        HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "can't register dataset atom")

done:
    if(ret_value < 0) {
        if(dset != NULL) {
            if(H5D_close(dset) < 0)
                HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, FAIL, "unable to release dataset")
        } /* end if */
        else {
            if(loc_found && H5G_loc_free(&dset_loc) < 0)
                HDONE_ERROR(H5E_SYM, H5E_CANTRELEASE, FAIL, "can't free location")
        } /* end else */
    } /* end if */

    FUNC_LEAVE_API(ret_value)
} /* end H5Dopen1() */


/*-------------------------------------------------------------------------
 * Function:	H5Dextend
 *
 * Purpose:	This function makes sure that the dataset is at least of size
 *		SIZE. The dimensionality of SIZE is the same as the data
 *		space of the dataset being changed.
 *
 * Note:	Deprecated in favor of H5Dset_extent
 *
 * Return:	Non-negative on success/Negative on failure
 *
 * Programmer:	Robb Matzke
 *		Friday, January 30, 1998
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5Dextend(hid_t dset_id, const hsize_t *size)
{
    H5D_t	*dset;
    herr_t       ret_value = SUCCEED;  /* Return value */

    FUNC_ENTER_API(H5Dextend, FAIL)
    H5TRACE2("e", "i*h", dset_id, size);

    /* Check args */
    if(NULL == (dset = (H5D_t *)H5I_object_verify(dset_id, H5I_DATASET)))
	HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset")
    if(!size)
	HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no size specified")

    /* Increase size */
    if(H5D_extend(dset, size, H5AC_dxpl_id) < 0)
	HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to extend dataset")

done:
    FUNC_LEAVE_API(ret_value)
} /* end H5Dextend() */


/*-------------------------------------------------------------------------
 * Function:	H5D_extend
 *
 * Purpose:	Increases the size of a dataset.
 *
 * Return:	Non-negative on success/Negative on failure
 *
 * Programmer:	Robb Matzke
 *		Friday, January 30, 1998
 *
 *-------------------------------------------------------------------------
 */
static herr_t
H5D_extend(H5D_t *dataset, const hsize_t *size, hid_t dxpl_id)
{
    htri_t changed;                     /* Flag to indicate that the dataspace was successfully extended */
    H5S_t *space;                       /* Dataset's dataspace */
    H5O_fill_t *fill;                   /* Dataset's fill value */
    herr_t ret_value = SUCCEED;         /* Return value */

    FUNC_ENTER_NOAPI_NOINIT(H5D_extend)

    /* Check args */
    HDassert(dataset);
    HDassert(size);

    /* Check if the filters in the DCPL will need to encode, and if so, can they?
     * Filters need encoding if fill value is defined and a fill policy is set that requires
     * writing on an extend.
     */
    fill = &dataset->shared->dcpl_cache.fill;
    if(!dataset->shared->checked_filters) {
        H5D_fill_value_t fill_status;       /* Whether the fill value is defined */

        /* Retrieve the "defined" status of the fill value */
        if(H5P_is_fill_value_defined(fill, &fill_status) < 0)
            HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "Couldn't retrieve fill value from dataset.")

        /* See if we can check the filter status */
        if(fill_status == H5D_FILL_VALUE_DEFAULT || fill_status == H5D_FILL_VALUE_USER_DEFINED) {
            if(fill->fill_time == H5D_FILL_TIME_ALLOC ||
                    (fill->fill_time == H5D_FILL_TIME_IFSET && fill_status == H5D_FILL_VALUE_USER_DEFINED)) {
                /* Filters must have encoding enabled. Ensure that all filters can be applied */
                if(H5Z_can_apply(dataset->shared->dcpl_id, dataset->shared->type_id) < 0)
                    HGOTO_ERROR(H5E_PLINE, H5E_CANAPPLY, FAIL, "can't apply filters")

                dataset->shared->checked_filters = TRUE;
            } /* end if */
        } /* end if */
    } /* end if */

    /*
     * NOTE: Restrictions on extensions were checked when the dataset was
     *	     created.  All extensions are allowed here since none should be
     *	     able to muck things up.
     */

    /* Increase the size of the data space */
    space = dataset->shared->space;
    if((changed = H5S_extend(space, size)) < 0)
	HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to increase size of data space")

    /* Updated the dataset's info if the dataspace was successfully extended */
    if(changed) {
	/* Save the new dataspace in the file if necessary */
	if(H5S_write(&(dataset->oloc), space, TRUE, dxpl_id) < 0)
	    HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "unable to update file with new dataspace")

        /* Update the index values for the cached chunks for this dataset */
        if(H5D_CHUNKED == dataset->shared->layout.type)
            if(H5D_istore_update_cache(dataset, dxpl_id) < 0)
                HGOTO_ERROR(H5E_DATASET, H5E_WRITEERROR, FAIL, "unable to update cached chunk indices")

	/* Allocate space for the new parts of the dataset, if appropriate */
        if(fill->alloc_time == H5D_ALLOC_TIME_EARLY)
            if(H5D_alloc_storage(dataset->oloc.file, dxpl_id, dataset, H5D_ALLOC_EXTEND, TRUE, FALSE) < 0)
                HGOTO_ERROR(H5E_DATASET, H5E_CANTINIT, FAIL, "unable to initialize dataset with fill value")
    } /* end if */

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5D_extend() */
#endif /* H5_NO_DEPRECATED_SYMBOLS */