summaryrefslogtreecommitdiffstats
path: root/src/H5EAsblock.c
blob: 0ba1fca2da96282c5cd8ede41601940f85b97c26 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by The HDF Group.                                               *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the COPYING file, which can be found at the root of the source code       *
 * distribution tree, or in https://www.hdfgroup.org/licenses.               *
 * If you do not have access to either file, you may request a copy from     *
 * help@hdfgroup.org.                                                        *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

/*-------------------------------------------------------------------------
 *
 * Created:		H5EAsblock.c
 *			Sep 30 2008
 *			Quincey Koziol
 *
 * Purpose:		Super block routines for extensible arrays.
 *
 *-------------------------------------------------------------------------
 */

/**********************/
/* Module Declaration */
/**********************/

#include "H5EAmodule.h" /* This source code file is part of the H5EA module */

/***********************/
/* Other Packages Used */
/***********************/

/***********/
/* Headers */
/***********/
#include "H5private.h"   /* Generic Functions			*/
#include "H5Eprivate.h"  /* Error handling		  	*/
#include "H5EApkg.h"     /* Extensible Arrays			*/
#include "H5FLprivate.h" /* Free Lists                           */
#include "H5MFprivate.h" /* File memory management		*/
#include "H5VMprivate.h" /* Vectors and arrays 			*/

/****************/
/* Local Macros */
/****************/

/******************/
/* Local Typedefs */
/******************/

/********************/
/* Package Typedefs */
/********************/

/********************/
/* Local Prototypes */
/********************/

/*********************/
/* Package Variables */
/*********************/

/*****************************/
/* Library Private Variables */
/*****************************/

/*******************/
/* Local Variables */
/*******************/

/* Declare a free list to manage the H5EA_iblock_t struct */
H5FL_DEFINE_STATIC(H5EA_sblock_t);

/* Declare a free list to manage the haddr_t sequence information */
H5FL_SEQ_DEFINE_STATIC(haddr_t);

/* Declare a free list to manage blocks of 'page init' bitmasks */
H5FL_BLK_DEFINE(page_init);

/*-------------------------------------------------------------------------
 * Function:	H5EA__sblock_alloc
 *
 * Purpose:	Allocate extensible array super block
 *
 * Return:	Non-NULL pointer to super block on success/NULL on failure
 *
 * Programmer:	Quincey Koziol
 *		Sep 30 2008
 *
 *-------------------------------------------------------------------------
 */
H5EA_sblock_t *
H5EA__sblock_alloc(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, unsigned sblk_idx)
{
    H5EA_sblock_t *sblock    = NULL; /* Extensible array super block */
    H5EA_sblock_t *ret_value = NULL;

    FUNC_ENTER_PACKAGE

    /* Check arguments */
    HDassert(hdr);

    /* Allocate memory for the index block */
    if (NULL == (sblock = H5FL_CALLOC(H5EA_sblock_t)))
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, NULL,
                    "memory allocation failed for extensible array super block")

    /* Share common array information */
    if (H5EA__hdr_incr(hdr) < 0)
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTINC, NULL, "can't increment reference count on shared array header")
    sblock->hdr = hdr;

    /* Set non-zero internal fields */
    sblock->parent = parent;
    sblock->addr   = HADDR_UNDEF;

    /* Compute/cache information */
    sblock->idx    = sblk_idx;
    sblock->ndblks = hdr->sblk_info[sblk_idx].ndblks;
    HDassert(sblock->ndblks);
    sblock->dblk_nelmts = hdr->sblk_info[sblk_idx].dblk_nelmts;

    /* Allocate buffer for data block addresses in super block */
    if (NULL == (sblock->dblk_addrs = H5FL_SEQ_MALLOC(haddr_t, sblock->ndblks)))
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, NULL,
                    "memory allocation failed for super block data block addresses")

    /* Check if # of elements in data blocks requires paging */
    if (sblock->dblk_nelmts > hdr->dblk_page_nelmts) {
        /* Compute # of pages in each data block from this super block */
        sblock->dblk_npages = sblock->dblk_nelmts / hdr->dblk_page_nelmts;

        /* Sanity check that we have at least 2 pages in data block */
        HDassert(sblock->dblk_npages > 1);

        /* Sanity check for integer truncation */
        HDassert((sblock->dblk_npages * hdr->dblk_page_nelmts) == sblock->dblk_nelmts);

        /* Compute size of buffer for each data block's 'page init' bitmask */
        sblock->dblk_page_init_size = ((sblock->dblk_npages) + 7) / 8;
        HDassert(sblock->dblk_page_init_size > 0);

        /* Allocate buffer for all 'page init' bitmasks in super block */
        if (NULL ==
            (sblock->page_init = H5FL_BLK_CALLOC(page_init, sblock->ndblks * sblock->dblk_page_init_size)))
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, NULL,
                        "memory allocation failed for super block page init bitmask")

        /* Compute data block page size */
        sblock->dblk_page_size = (hdr->dblk_page_nelmts * hdr->cparam.raw_elmt_size) + H5EA_SIZEOF_CHKSUM;
    } /* end if */

    /* Set the return value */
    ret_value = sblock;

done:
    if (!ret_value)
        if (sblock && H5EA__sblock_dest(sblock) < 0)
            HDONE_ERROR(H5E_EARRAY, H5E_CANTFREE, NULL, "unable to destroy extensible array super block")

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5EA__sblock_alloc() */

/*-------------------------------------------------------------------------
 * Function:	H5EA__sblock_create
 *
 * Purpose:	Creates a new extensible array super block in the file
 *
 * Return:	Valid file address on success/HADDR_UNDEF on failure
 *
 * Programmer:	Quincey Koziol
 *		Sep 30 2008
 *
 *-------------------------------------------------------------------------
 */
haddr_t
H5EA__sblock_create(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, hbool_t *stats_changed, unsigned sblk_idx)
{
    H5EA_sblock_t *sblock = NULL;           /* Extensible array super block */
    haddr_t        sblock_addr;             /* Extensible array super block address */
    haddr_t        tmp_addr  = HADDR_UNDEF; /* Address value to fill data block addresses with */
    hbool_t        inserted  = FALSE;       /* Whether the header was inserted into cache */
    haddr_t        ret_value = HADDR_UNDEF;

    FUNC_ENTER_PACKAGE

    /* Sanity check */
    HDassert(hdr);
    HDassert(stats_changed);

    /* Allocate the super block */
    if (NULL == (sblock = H5EA__sblock_alloc(hdr, parent, sblk_idx)))
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, HADDR_UNDEF,
                    "memory allocation failed for extensible array super block")

    /* Set size of super block on disk */
    sblock->size = H5EA_SBLOCK_SIZE(sblock);

    /* Set offset of block in array's address space */
    sblock->block_off = hdr->sblk_info[sblk_idx].start_idx;

    /* Allocate space for the super block on disk */
    if (HADDR_UNDEF == (sblock_addr = H5MF_alloc(hdr->f, H5FD_MEM_EARRAY_SBLOCK, (hsize_t)sblock->size)))
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTALLOC, HADDR_UNDEF,
                    "file allocation failed for extensible array super block")
    sblock->addr = sblock_addr;

    /* Reset data block addresses to "undefined" address value */
    H5VM_array_fill(sblock->dblk_addrs, &tmp_addr, sizeof(haddr_t), sblock->ndblks);

    /* Cache the new extensible array super block */
    if (H5AC_insert_entry(hdr->f, H5AC_EARRAY_SBLOCK, sblock_addr, sblock, H5AC__NO_FLAGS_SET) < 0)
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTINSERT, HADDR_UNDEF,
                    "can't add extensible array super block to cache")
    inserted = TRUE;

    /* Add super block as child of 'top' proxy */
    if (hdr->top_proxy) {
        if (H5AC_proxy_entry_add_child(hdr->top_proxy, hdr->f, sblock) < 0)
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTSET, HADDR_UNDEF,
                        "unable to add extensible array entry as child of array proxy")
        sblock->top_proxy = hdr->top_proxy;
    } /* end if */

    /* Update extensible array super block statistics */
    hdr->stats.stored.nsuper_blks++;
    hdr->stats.stored.super_blk_size += sblock->size;

    /* Mark the statistics as changed */
    *stats_changed = TRUE;

    /* Set address of super block to return */
    ret_value = sblock_addr;

done:
    if (!H5F_addr_defined(ret_value))
        if (sblock) {
            /* Remove from cache, if inserted */
            if (inserted)
                if (H5AC_remove_entry(sblock) < 0)
                    HDONE_ERROR(H5E_EARRAY, H5E_CANTREMOVE, HADDR_UNDEF,
                                "unable to remove extensible array super block from cache")

            /* Release super block's disk space */
            if (H5F_addr_defined(sblock->addr) &&
                H5MF_xfree(hdr->f, H5FD_MEM_EARRAY_SBLOCK, sblock->addr, (hsize_t)sblock->size) < 0)
                HDONE_ERROR(H5E_EARRAY, H5E_CANTFREE, HADDR_UNDEF,
                            "unable to release extensible array super block")

            /* Destroy super block */
            if (H5EA__sblock_dest(sblock) < 0)
                HDONE_ERROR(H5E_EARRAY, H5E_CANTFREE, HADDR_UNDEF,
                            "unable to destroy extensible array super block")
        } /* end if */

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5EA__sblock_create() */

/*-------------------------------------------------------------------------
 * Function:	H5EA__sblock_protect
 *
 * Purpose:	Convenience wrapper around protecting extensible array super block
 *
 * Return:	Non-NULL pointer to data block on success/NULL on failure
 *
 * Programmer:	Quincey Koziol
 *		Sep 30 2008
 *
 *-------------------------------------------------------------------------
 */
H5EA_sblock_t *
H5EA__sblock_protect(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, haddr_t sblk_addr, unsigned sblk_idx,
                     unsigned flags)
{
    H5EA_sblock_t         *sblock = NULL; /* Pointer to super block */
    H5EA_sblock_cache_ud_t udata;         /* Information needed for loading super block */
    H5EA_sblock_t         *ret_value = NULL;

    FUNC_ENTER_PACKAGE

    /* Sanity check */
    HDassert(hdr);
    HDassert(H5F_addr_defined(sblk_addr));

    /* only the H5AC__READ_ONLY_FLAG may be set */
    HDassert((flags & (unsigned)(~H5AC__READ_ONLY_FLAG)) == 0);

    /* Set up user data */
    udata.hdr       = hdr;
    udata.parent    = parent;
    udata.sblk_idx  = sblk_idx;
    udata.sblk_addr = sblk_addr;

    /* Protect the super block */
    if (NULL ==
        (sblock = (H5EA_sblock_t *)H5AC_protect(hdr->f, H5AC_EARRAY_SBLOCK, sblk_addr, &udata, flags)))
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTPROTECT, NULL,
                    "unable to protect extensible array super block, address = %llu",
                    (unsigned long long)sblk_addr)

    /* Create top proxy, if it doesn't exist */
    if (hdr->top_proxy && NULL == sblock->top_proxy) {
        /* Add super block as child of 'top' proxy */
        if (H5AC_proxy_entry_add_child(hdr->top_proxy, hdr->f, sblock) < 0)
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTSET, NULL,
                        "unable to add extensible array entry as child of array proxy")
        sblock->top_proxy = hdr->top_proxy;
    }

    /* Set return value */
    ret_value = sblock;

done:
    /* Clean up on error */
    if (!ret_value) {
        /* Release the super block, if it was protected */
        if (sblock &&
            H5AC_unprotect(hdr->f, H5AC_EARRAY_SBLOCK, sblock->addr, sblock, H5AC__NO_FLAGS_SET) < 0)
            HDONE_ERROR(H5E_EARRAY, H5E_CANTUNPROTECT, NULL,
                        "unable to unprotect extensible array super block, address = %llu",
                        (unsigned long long)sblock->addr)
    }

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5EA__sblock_protect() */

/*-------------------------------------------------------------------------
 * Function:	H5EA__sblock_unprotect
 *
 * Purpose:	Convenience wrapper around unprotecting extensible array super block
 *
 * Return:	Non-negative on success/Negative on failure
 *
 * Programmer:	Quincey Koziol
 *		Sep 30 2008
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5EA__sblock_unprotect(H5EA_sblock_t *sblock, unsigned cache_flags)
{
    herr_t ret_value = SUCCEED;

    FUNC_ENTER_PACKAGE

    /* Sanity check */
    HDassert(sblock);

    /* Unprotect the super block */
    if (H5AC_unprotect(sblock->hdr->f, H5AC_EARRAY_SBLOCK, sblock->addr, sblock, cache_flags) < 0)
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTUNPROTECT, FAIL,
                    "unable to unprotect extensible array super block, address = %llu",
                    (unsigned long long)sblock->addr)

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5EA__sblock_unprotect() */

/*-------------------------------------------------------------------------
 * Function:	H5EA__sblock_delete
 *
 * Purpose:	Delete a super block
 *
 * Return:	SUCCEED/FAIL
 *
 * Programmer:	Quincey Koziol
 *		Sep 30 2008
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5EA__sblock_delete(H5EA_hdr_t *hdr, H5EA_iblock_t *parent, haddr_t sblk_addr, unsigned sblk_idx)
{
    H5EA_sblock_t *sblock = NULL; /* Pointer to super block */
    size_t         u;             /* Local index variable */
    herr_t         ret_value = SUCCEED;

    FUNC_ENTER_PACKAGE

    /* Sanity check */
    HDassert(hdr);
    HDassert(H5F_addr_defined(sblk_addr));

    /* Protect super block */
    if (NULL == (sblock = H5EA__sblock_protect(hdr, parent, sblk_addr, sblk_idx, H5AC__NO_FLAGS_SET)))
        HGOTO_ERROR(H5E_EARRAY, H5E_CANTPROTECT, FAIL,
                    "unable to protect extensible array super block, address = %llu",
                    (unsigned long long)sblk_addr)

    /* Iterate over data blocks */
    for (u = 0; u < sblock->ndblks; u++) {
        /* Check for data block existing */
        if (H5F_addr_defined(sblock->dblk_addrs[u])) {
            /* Delete data block */
            if (H5EA__dblock_delete(hdr, sblock, sblock->dblk_addrs[u], sblock->dblk_nelmts) < 0)
                HGOTO_ERROR(H5E_EARRAY, H5E_CANTDELETE, FAIL, "unable to delete extensible array data block")
            sblock->dblk_addrs[u] = HADDR_UNDEF;
        } /* end if */
    }     /* end for */

done:
    /* Finished deleting super block in metadata cache */
    if (sblock && H5EA__sblock_unprotect(sblock, H5AC__DIRTIED_FLAG | H5AC__DELETED_FLAG |
                                                     H5AC__FREE_FILE_SPACE_FLAG) < 0)
        HDONE_ERROR(H5E_EARRAY, H5E_CANTUNPROTECT, FAIL, "unable to release extensible array super block")

    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5EA__sblock_delete() */

/*-------------------------------------------------------------------------
 * Function:	H5EA__sblock_dest
 *
 * Purpose:	Destroys an extensible array super block in memory.
 *
 * Return:	Non-negative on success/Negative on failure
 *
 * Programmer:	Quincey Koziol
 *		Sep 30 2008
 *
 *-------------------------------------------------------------------------
 */
herr_t
H5EA__sblock_dest(H5EA_sblock_t *sblock)
{
    herr_t ret_value = SUCCEED;

    FUNC_ENTER_PACKAGE

    /* Sanity check */
    HDassert(sblock);
    HDassert(!sblock->has_hdr_depend);

    /* Check if shared header field has been initialized */
    if (sblock->hdr) {
        /* Free buffer for super block data block addresses, if there are any */
        if (sblock->dblk_addrs)
            sblock->dblk_addrs = H5FL_SEQ_FREE(haddr_t, sblock->dblk_addrs);

        /* Free buffer for super block 'page init' bitmask, if there is one */
        if (sblock->page_init) {
            HDassert(sblock->dblk_npages > 0);
            sblock->page_init = H5FL_BLK_FREE(page_init, sblock->page_init);
        } /* end if */

        /* Decrement reference count on shared info */
        if (H5EA__hdr_decr(sblock->hdr) < 0)
            HGOTO_ERROR(H5E_EARRAY, H5E_CANTDEC, FAIL,
                        "can't decrement reference count on shared array header")
        sblock->hdr = NULL;
    } /* end if */

    /* Sanity check */
    HDassert(NULL == sblock->top_proxy);

    /* Free the super block itself */
    sblock = H5FL_FREE(H5EA_sblock_t, sblock);

done:
    FUNC_LEAVE_NOAPI(ret_value)
} /* end H5EA__sblock_dest() */