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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/****************/
/* Module Setup */
/****************/
#include "H5Fmodule.h" /* This source code file is part of the H5F module */
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Aprivate.h" /* Attributes */
#include "H5ACprivate.h" /* Metadata cache */
#include "H5CXprivate.h" /* API Contexts */
#include "H5Dprivate.h" /* Datasets */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* File access */
#include "H5FDprivate.h" /* File drivers */
#include "H5Gprivate.h" /* Groups */
#include "H5Iprivate.h" /* IDs */
#include "H5MFprivate.h" /* File memory management */
#include "H5MMprivate.h" /* Memory management */
#include "H5Pprivate.h" /* Property lists */
#include "H5Tprivate.h" /* Datatypes */
/****************/
/* Local Macros */
/****************/
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Package Typedefs */
/********************/
/********************/
/* Local Prototypes */
/********************/
/*********************/
/* Package Variables */
/*********************/
/* Package initialization variable */
hbool_t H5_PKG_INIT_VAR = FALSE;
/*****************************/
/* Library Private Variables */
/*****************************/
/*******************/
/* Local Variables */
/*******************/
/* File ID class */
static const H5I_class_t H5I_FILE_CLS[1] = {{
H5I_FILE, /* ID class value */
0, /* Class flags */
0, /* # of reserved IDs for class */
(H5I_free_t)H5F__close_cb /* Callback routine for closing objects of this class */
}};
/*--------------------------------------------------------------------------
NAME
H5F__init_package -- Initialize interface-specific information
USAGE
herr_t H5F__init_package()
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Initializes any interface-specific data or routines.
--------------------------------------------------------------------------*/
herr_t
H5F__init_package(void)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_PACKAGE
/*
* Initialize the atom group for the file IDs.
*/
if(H5I_register_type(H5I_FILE_CLS) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "unable to initialize interface")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F__init_package() */
/*-------------------------------------------------------------------------
* Function: H5F_term_package
*
* Purpose: Terminate this interface: free all memory and reset global
* variables to their initial values. Release all ID groups
* associated with this interface.
*
* Return: Success: Positive if anything was done that might
* have affected other interfaces;
* zero otherwise.
* Failure: Never fails.
*-------------------------------------------------------------------------
*/
int
H5F_term_package(void)
{
int n = 0;
FUNC_ENTER_NOAPI_NOINIT_NOERR
if(H5_PKG_INIT_VAR) {
if(H5I_nmembers(H5I_FILE) > 0) {
(void)H5I_clear_type(H5I_FILE, FALSE, FALSE);
n++; /*H5I*/
} /* end if */
else {
/* Make certain we've cleaned up all the shared file objects */
H5F_sfile_assert_num(0);
/* Destroy the file object id group */
n += (H5I_dec_type_ref(H5I_FILE) > 0);
/* Mark closed */
if(0 == n)
H5_PKG_INIT_VAR = FALSE;
} /* end else */
} /* end if */
FUNC_LEAVE_NOAPI(n)
} /* end H5F_term_package() */
/*-------------------------------------------------------------------------
* Function: H5Fget_create_plist
*
* Purpose: Get an atom for a copy of the file-creation property list for
* this file. This function returns an atom with a copy of the
* properties used to create a file.
*
* Return: Success: template ID
* Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
H5Fget_create_plist(hid_t file_id)
{
H5F_t *file; /* File info */
H5P_genplist_t *plist; /* Property list */
hid_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "i", file_id);
/* check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
if(NULL == (plist = (H5P_genplist_t *)H5I_object(file->shared->fcpl_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a property list")
/* Create the property list object to return */
if((ret_value = H5P_copy_plist(plist, TRUE)) < 0)
HGOTO_ERROR(H5E_INTERNAL, H5E_CANTINIT, FAIL, "unable to copy file creation properties")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_create_plist() */
/*-------------------------------------------------------------------------
* Function: H5Fget_access_plist
*
* Purpose: Returns a copy of the file access property list of the
* specified file.
*
* NOTE: Make sure that, if you are going to overwrite
* information in the copied property list that was
* previously opened and assigned to the property list, then
* you must close it before overwriting the values.
*
* Return: Success: Object ID for a copy of the file access
* property list.
* Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
H5Fget_access_plist(hid_t file_id)
{
H5F_t *f; /* File info */
hid_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "i", file_id);
/* Check args */
if(NULL == (f = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
/* Retrieve the file's access property list */
if((ret_value = H5F_get_access_plist(f, TRUE)) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get file access property list")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_access_plist() */
/*-------------------------------------------------------------------------
* Function: H5Fget_obj_count
*
* Purpose: Public function returning the number of opened object IDs
* (files, datasets, groups and datatypes) in the same file.
*
* Return: Non-negative on success; negative on failure.
*-------------------------------------------------------------------------
*/
ssize_t
H5Fget_obj_count(hid_t file_id, unsigned types)
{
H5F_t *f = NULL; /* File to query */
size_t obj_count = 0; /* Number of opened objects */
ssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("Zs", "iIu", file_id, types);
/* Check arguments */
if(file_id != (hid_t)H5F_OBJ_ALL && (NULL == (f = (H5F_t *)H5I_object_verify(file_id, H5I_FILE))))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file id")
if(0 == (types & H5F_OBJ_ALL))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not an object type")
/* Perform the query */
if(H5F_get_obj_count(f, types, TRUE, &obj_count) < 0)
HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
/* Set the return value */
ret_value = (ssize_t)obj_count;
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_obj_count() */
/*-------------------------------------------------------------------------
* Function: H5Fget_object_ids
*
* Purpose: Public function to return a list of opened object IDs.
*
* Return: Non-negative on success; negative on failure.
*-------------------------------------------------------------------------
*/
ssize_t
H5Fget_obj_ids(hid_t file_id, unsigned types, size_t max_objs, hid_t *oid_list)
{
H5F_t *f = NULL; /* File to query */
size_t obj_id_count = 0; /* Number of open objects */
ssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE4("Zs", "iIuz*i", file_id, types, max_objs, oid_list);
/* Check arguments */
if(file_id != (hid_t)H5F_OBJ_ALL && (NULL == (f = (H5F_t *)H5I_object_verify(file_id, H5I_FILE))))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file id")
if(0 == (types & H5F_OBJ_ALL))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not an object type")
if(!oid_list)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "object ID list is NULL")
/* Perform the query */
if(H5F_get_obj_ids(f, types, max_objs, oid_list, TRUE, &obj_id_count) < 0)
HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_ids failed")
/* Set the return value */
ret_value = (ssize_t)obj_id_count;
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_obj_ids() */
/*-------------------------------------------------------------------------
* Function: H5Fget_vfd_handle
*
* Purpose: Returns a pointer to the file handle of the low-level file
* driver.
*
* Return: Success: non-negative value.
* Failure: negative.
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_vfd_handle(hid_t file_id, hid_t fapl, void **file_handle)
{
H5F_t *file; /* File to query */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE3("e", "ii**x", file_id, fapl, file_handle);
/* Check args */
if(!file_handle)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid file handle pointer")
/* Get the file */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file id")
/* Retrieve the VFD handle for the file */
if(H5F_get_vfd_handle(file, fapl, file_handle) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't retrieve VFD handle")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_vfd_handle() */
/*-------------------------------------------------------------------------
* Function: H5Fis_hdf5
*
* Purpose: Check the file signature to detect an HDF5 file.
*
* Bugs: This function is not robust: it only uses the default file
* driver when attempting to open the file when in fact it
* should use all known file drivers.
*
* Return: Success: TRUE/FALSE
* Failure: Negative
*-------------------------------------------------------------------------
*/
htri_t
H5Fis_hdf5(const char *name)
{
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
htri_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("t", "*s", name);
/* Check args and all the boring stuff. */
if(!name || !*name)
HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "no file name specified")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* call the private is_HDF5 function */
/* (Should not trigger raw data I/O - QAK, 2018/01/03) */
if((ret_value = H5F__is_hdf5(name)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_NOTHDF5, FAIL, "unable open file")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fis_hdf5() */
/*-------------------------------------------------------------------------
* Function: H5Fcreate
*
* Purpose: This is the primary function for creating HDF5 files . The
* flags parameter determines whether an existing file will be
* overwritten or not. All newly created files are opened for
* both reading and writing. All flags may be combined with the
* bit-wise OR operator (`|') to change the behavior of the file
* create call.
*
* The more complex behaviors of a file's creation and access
* are controlled through the file-creation and file-access
* property lists. The value of H5P_DEFAULT for a template
* value indicates that the library should use the default
* values for the appropriate template.
*
* See also: H5Fpublic.h for the list of supported flags. H5Ppublic.h for
* the list of file creation and file access properties.
*
* Return: Success: A file ID
* Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
H5Fcreate(const char *filename, unsigned flags, hid_t fcpl_id, hid_t fapl_id)
{
H5F_t *new_file = NULL; /* file struct for new file */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
hid_t ret_value; /* return value */
FUNC_ENTER_API(H5I_INVALID_HID)
H5TRACE4("i", "*sIuii", filename, flags, fcpl_id, fapl_id);
/* Check/fix arguments */
if (!filename || !*filename)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid file name")
/* In this routine, we only accept the following flags:
* H5F_ACC_EXCL, H5F_ACC_TRUNC and H5F_ACC_SWMR_WRITE
*/
if (flags & ~(H5F_ACC_EXCL | H5F_ACC_TRUNC | H5F_ACC_SWMR_WRITE))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid flags")
/* The H5F_ACC_EXCL and H5F_ACC_TRUNC flags are mutually exclusive */
if ((flags & H5F_ACC_EXCL) && (flags & H5F_ACC_TRUNC))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "mutually exclusive flags for file creation")
/* Check file creation property list */
if (H5P_DEFAULT == fcpl_id)
fcpl_id = H5P_FILE_CREATE_DEFAULT;
else
if (TRUE != H5P_isa_class(fcpl_id, H5P_FILE_CREATE))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "not file create property list")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set API context")
api_ctx_pushed = TRUE;
/* Verify access property list and set up collective metadata if appropriate */
if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, H5I_INVALID_HID, TRUE) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set access property list info")
/* Adjust bit flags by turning on the creation bit and making sure that
* the EXCL or TRUNC bit is set. All newly-created files are opened for
* reading and writing.
*/
if (0 == (flags & (H5F_ACC_EXCL | H5F_ACC_TRUNC)))
flags |= H5F_ACC_EXCL; /*default*/
flags |= H5F_ACC_RDWR | H5F_ACC_CREAT;
/* Create a new file or truncate an existing file. */
if (NULL == (new_file = H5F__create(filename, flags, fcpl_id, fapl_id)))
HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "unable to create file")
/* Get an atom for the file */
if ((ret_value = H5I_register(H5I_FILE, new_file, TRUE)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to atomize file")
/* Keep this ID in file object structure */
new_file->file_id = ret_value;
done:
if(ret_value < 0 && new_file && H5F_try_close(new_file, NULL) < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, H5I_INVALID_HID, "problems closing file")
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, H5I_INVALID_HID, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fcreate() */
/*-------------------------------------------------------------------------
* Function: H5Fopen
*
* Purpose: This is the primary function for accessing existing HDF5
* files. The FLAGS argument determines whether writing to an
* existing file will be allowed or not. All flags may be
* combined with the bit-wise OR operator (`|') to change the
* behavior of the file open call. The more complex behaviors
* of a file's access are controlled through the file-access
* property list.
*
* See Also: H5Fpublic.h for a list of possible values for FLAGS.
*
* Return: Success: A file ID
*
* Failure: FAIL
*
*-------------------------------------------------------------------------
*/
hid_t
H5Fopen(const char *filename, unsigned flags, hid_t fapl_id)
{
H5F_t *new_file = NULL; /* file struct for new file */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
hid_t ret_value; /* return value */
FUNC_ENTER_API(H5I_INVALID_HID)
H5TRACE3("i", "*sIui", filename, flags, fapl_id);
/* Check/fix arguments. */
if(!filename || !*filename)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid file name")
/* Reject undefined flags (~H5F_ACC_PUBLIC_FLAGS) and the H5F_ACC_TRUNC & H5F_ACC_EXCL flags */
if((flags & ~H5F_ACC_PUBLIC_FLAGS) ||
(flags & H5F_ACC_TRUNC) || (flags & H5F_ACC_EXCL))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid file open flags")
/* Asking for SWMR write access on a read-only file is invalid */
if((flags & H5F_ACC_SWMR_WRITE) && 0 == (flags & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "SWMR write access on a file open for read-only access is not allowed")
/* Asking for SWMR read access on a non-read-only file is invalid */
if((flags & H5F_ACC_SWMR_READ) && (flags & H5F_ACC_RDWR))
HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "SWMR read access on a file open for read-write access is not allowed")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set API context")
api_ctx_pushed = TRUE;
/* Verify access property list and set up collective metadata if appropriate */
if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, H5I_INVALID_HID, TRUE) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set access property list info")
/* Open the file */
if(NULL == (new_file = H5F__open(filename, flags, H5P_FILE_CREATE_DEFAULT, fapl_id)))
HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "unable to open file")
/* Get an atom for the file */
if((ret_value = H5I_register(H5I_FILE, new_file, TRUE)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to atomize file handle")
/* Keep this ID in file object structure */
new_file->file_id = ret_value;
done:
if(ret_value < 0 && new_file && H5F_try_close(new_file, NULL) < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, H5I_INVALID_HID, "problems closing file")
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, H5I_INVALID_HID, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fopen() */
/*-------------------------------------------------------------------------
* Function: H5Fflush
*
* Purpose: Flushes all outstanding buffers of a file to disk but does
* not remove them from the cache. The OBJECT_ID can be a file,
* dataset, group, attribute, or named data type.
*
* Return: Non-negative on success/Negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fflush(hid_t object_id, H5F_scope_t scope)
{
H5F_t *f = NULL; /* File to flush */
H5O_loc_t *oloc = NULL; /* Object location for ID */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "iFs", object_id, scope);
switch(H5I_get_type(object_id)) {
case H5I_FILE:
if(NULL == (f = (H5F_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier")
break;
case H5I_GROUP:
{
H5G_t *grp;
if(NULL == (grp = (H5G_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid group identifier")
oloc = H5G_oloc(grp);
}
break;
case H5I_DATATYPE:
{
H5T_t *type;
if(NULL == (type = (H5T_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid type identifier")
oloc = H5T_oloc(type);
}
break;
case H5I_DATASET:
{
H5D_t *dset;
if(NULL == (dset = (H5D_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier")
oloc = H5D_oloc(dset);
}
break;
case H5I_ATTR:
{
H5A_t *attr;
if(NULL == (attr = (H5A_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid attribute identifier")
oloc = H5A_oloc(attr);
}
break;
case H5I_UNINIT:
case H5I_BADID:
case H5I_DATASPACE:
case H5I_REFERENCE:
case H5I_VFL:
case H5I_GENPROP_CLS:
case H5I_GENPROP_LST:
case H5I_ERROR_CLASS:
case H5I_ERROR_MSG:
case H5I_ERROR_STACK:
case H5I_NTYPES:
default:
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file or file object")
} /* end switch */
if(!f) {
if(!oloc)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "object is not assocated with a file")
f = oloc->file;
} /* end if */
if(!f)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "object is not associated with a file")
/* Flush the file */
/*
* Nothing to do if the file is read only. This determination is
* made at the shared open(2) flags level, implying that opening a
* file twice, once for read-only and once for read-write, and then
* calling H5Fflush() with the read-only handle, still causes data
* to be flushed.
*/
if(H5F_ACC_RDWR & H5F_INTENT(f)) {
hid_t fapl_id = H5P_DEFAULT; /* FAPL to use */
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Verify access property list and set up collective metadata if appropriate */
if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, object_id, TRUE) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set access property list info")
/* Flush the file */
if(H5F__flush(f, scope) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
} /* end if */
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fflush() */
/*-------------------------------------------------------------------------
* Function: H5Fclose
*
* Purpose: This function closes the file specified by FILE_ID by
* flushing all data to storage, and terminating access to the
* file through FILE_ID. If objects (e.g., datasets, groups,
* etc.) are open in the file then the underlying storage is not
* closed until those objects are closed; however, all data for
* the file and the open objects is flushed.
*
* Return: Success: Non-negative
* Failure: Negative
*-------------------------------------------------------------------------
*/
herr_t
H5Fclose(hid_t file_id)
{
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED;
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* Check arguments */
if(H5I_FILE != H5I_get_type(file_id))
HGOTO_ERROR(H5E_FILE, H5E_BADTYPE, FAIL, "not a file ID")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Close the file */
if(H5F__close(file_id) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "closing file ID failed")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fclose() */
/*-------------------------------------------------------------------------
* Function: H5Freopen
*
* Purpose: Reopen a file. The new file handle which is returned points
* to the same file as the specified file handle. Both handles
* share caches and other information. The only difference
* between the handles is that the new handle is not mounted
* anywhere and no files are mounted on it.
*
* Return: Success: New file ID
* Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
H5Freopen(hid_t file_id)
{
H5F_t *old_file = NULL;
H5F_t *new_file = NULL;
hid_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "i", file_id);
/* Check arguments */
if(NULL == (old_file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
/* Get a new "top level" file struct, sharing the same "low level" file struct */
if(NULL == (new_file = H5F_new(old_file->shared, 0, H5P_FILE_CREATE_DEFAULT, H5P_FILE_ACCESS_DEFAULT, NULL)))
HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "unable to reopen file")
/* Duplicate old file's names */
new_file->open_name = H5MM_xstrdup(old_file->open_name);
new_file->actual_name = H5MM_xstrdup(old_file->actual_name);
new_file->extpath = H5MM_xstrdup(old_file->extpath);
if((ret_value = H5I_register(H5I_FILE, new_file, TRUE)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to atomize file handle")
/* Keep this ID in file object structure */
new_file->file_id = ret_value;
done:
if(ret_value < 0 && new_file)
if(H5F__dest(new_file, FALSE) < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "can't close file")
FUNC_LEAVE_API(ret_value)
} /* end H5Freopen() */
/*-------------------------------------------------------------------------
* Function: H5Fget_intent
*
* Purpose: Public API to retrieve the file's 'intent' flags passed
* during H5Fopen()
*
* Return: Non-negative on success/negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_intent(hid_t file_id, unsigned *intent_flags)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*Iu", file_id, intent_flags);
/* If no intent flags were passed in, exit quietly */
if(intent_flags) {
H5F_t *file; /* Pointer to file structure */
/* Get the internal file structure */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
/* HDF5 uses some flags internally that users don't know about.
* Simplify things for them so that they only get either H5F_ACC_RDWR
* or H5F_ACC_RDONLY.
*/
if(H5F_INTENT(file) & H5F_ACC_RDWR) {
*intent_flags = H5F_ACC_RDWR;
/* Check for SWMR write access on the file */
if(H5F_INTENT(file) & H5F_ACC_SWMR_WRITE)
*intent_flags |= H5F_ACC_SWMR_WRITE;
} /* end if */
else {
*intent_flags = H5F_ACC_RDONLY;
/* Check for SWMR read access on the file */
if(H5F_INTENT(file) & H5F_ACC_SWMR_READ)
*intent_flags |= H5F_ACC_SWMR_READ;
} /* end else */
} /* end if */
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_intent() */
/*-------------------------------------------------------------------------
* Function: H5Fget_freespace
*
* Purpose: Retrieves the amount of free space in the file.
*
* Return: Success: Amount of free space for type
* Failure: Negative
*-------------------------------------------------------------------------
*/
hssize_t
H5Fget_freespace(hid_t file_id)
{
H5F_t *file; /* File object for file ID */
hsize_t tot_space; /* Amount of free space in the file */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
hssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("Hs", "i", file_id);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Get the free space in the file */
if(H5F__get_freespace(file, &tot_space) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to check free space for file")
ret_value = (hssize_t)tot_space;
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_freespace() */
/*-------------------------------------------------------------------------
* Function: H5Fget_filesize
*
* Purpose: Retrieves the file size of the HDF5 file. This function
* is called after an existing file is opened in order
* to learn the true size of the underlying file.
*
* Return: Success: Non-negative
* Failure: Negative
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_filesize(hid_t file_id, hsize_t *size)
{
H5F_t *file; /* File object for file ID */
haddr_t max_eof_eoa; /* Maximum of the EOA & EOF */
haddr_t base_addr; /* Base address for the file */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*h", file_id, size);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Go get the actual file size */
if(H5F__get_max_eof_eoa(file, &max_eof_eoa) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "file can't get max eof/eoa ")
base_addr = H5FD_get_base_addr(file->shared->lf);
if(size)
*size = (hsize_t)(max_eof_eoa + base_addr); /* Convert relative base address for file to absolute address */
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_filesize() */
/*-------------------------------------------------------------------------
* Function: H5Fget_file_image
*
* Purpose: If a buffer is provided (via the buf_ptr argument) and is
* big enough (size in buf_len argument), load *buf_ptr with
* an image of the open file whose ID is provided in the
* file_id parameter, and return the number of bytes copied
* to the buffer.
*
* If the buffer exists, but is too small to contain an image
* of the indicated file, return a negative number.
*
* Finally, if no buffer is provided, return the size of the
* buffer needed. This value is simply the eoa of the target
* file.
*
* Note that any user block is skipped.
*
* Also note that the function may not be used on files
* opened with either the split/multi file driver or the
* family file driver.
*
* In the former case, the sparse address space makes the
* get file image operation impractical, due to the size of
* the image typically required.
*
* In the case of the family file driver, the problem is
* the driver message in the super block, which will prevent
* the image being opened with any driver other than the
* family file driver -- which negates the purpose of the
* operation. This can be fixed, but no resources for
* this now.
*
* Return: Success: Bytes copied / number of bytes needed.
* Failure: negative value
*-------------------------------------------------------------------------
*/
ssize_t
H5Fget_file_image(hid_t file_id, void *buf_ptr, size_t buf_len)
{
H5F_t *file; /* File object for file ID */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
ssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE3("Zs", "i*xz", file_id, buf_ptr, buf_len);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* call private get_file_image function */
/* (Should not trigger raw data I/O - QAK, 2018/01/03) */
if((ret_value = H5F__get_file_image(file, buf_ptr, buf_len)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get file image")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* H5Fget_file_image() */
/*-------------------------------------------------------------------------
* Function: H5Fget_mdc_config
*
* Purpose: Retrieves the current automatic cache resize configuration
* from the metadata cache, and return it in *config_ptr.
*
* Note that the version field of *config_Ptr must be correctly
* filled in by the caller. This allows us to adapt for
* obsolete versions of the structure.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr)
{
H5F_t *file; /* File object for file ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*x", file_id, config_ptr);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
if((NULL == config_ptr) || (config_ptr->version != H5AC__CURR_CACHE_CONFIG_VERSION))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "Bad config_ptr")
/* Go get the resize configuration */
if(H5AC_get_cache_auto_resize_config(file->shared->cache, config_ptr) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "H5AC_get_cache_auto_resize_config() failed.")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_mdc_config() */
/*-------------------------------------------------------------------------
* Function: H5Fset_mdc_config
*
* Purpose: Sets the current metadata cache automatic resize
* configuration, using the contents of the instance of
* H5AC_cache_config_t pointed to by config_ptr.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Fset_mdc_config(hid_t file_id, H5AC_cache_config_t *config_ptr)
{
H5F_t *file; /* File object for file ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*x", file_id, config_ptr);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* set the resize configuration */
if(H5AC_set_cache_auto_resize_config(file->shared->cache, config_ptr) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "H5AC_set_cache_auto_resize_config() failed.")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fset_mdc_config() */
/*-------------------------------------------------------------------------
* Function: H5Fget_mdc_hit_rate
*
* Purpose: Retrieves the current hit rate from the metadata cache.
* This rate is the overall hit rate since the last time
* the hit rate statistics were reset either manually or
* automatically.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mdc_hit_rate(hid_t file_id, double *hit_rate_ptr)
{
H5F_t *file; /* File object for file ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*d", file_id, hit_rate_ptr);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
if(NULL == hit_rate_ptr)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "NULL hit rate pointer")
/* Go get the current hit rate */
if(H5AC_get_cache_hit_rate(file->shared->cache, hit_rate_ptr) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "H5AC_get_cache_hit_rate() failed.")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_mdc_hit_rate() */
/*-------------------------------------------------------------------------
* Function: H5Fget_mdc_size
*
* Purpose: Retrieves the maximum size, minimum clean size, current
* size, and current number of entries from the metadata
* cache associated with the specified file. If any of
* the ptr parameters are NULL, the associated datum is
* not returned.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mdc_size(hid_t file_id, size_t *max_size_ptr, size_t *min_clean_size_ptr,
size_t *cur_size_ptr, int *cur_num_entries_ptr)
{
H5F_t *file; /* File object for file ID */
uint32_t cur_num_entries;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE5("e", "i*z*z*z*Is", file_id, max_size_ptr, min_clean_size_ptr,
cur_size_ptr, cur_num_entries_ptr);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Go get the size data */
if(H5AC_get_cache_size(file->shared->cache, max_size_ptr,
min_clean_size_ptr, cur_size_ptr, &cur_num_entries) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "H5AC_get_cache_size() failed.")
if(cur_num_entries_ptr != NULL)
*cur_num_entries_ptr = (int)cur_num_entries;
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_mdc_size() */
/*-------------------------------------------------------------------------
* Function: H5Freset_mdc_hit_rate_stats
*
* Purpose: Reset the hit rate statistic whose current value can
* be obtained via the H5Fget_mdc_hit_rate() call. Note
* that this statistic will also be reset once per epoch
* by the automatic cache resize code if it is enabled.
*
* It is probably a bad idea to call this function unless
* you are controlling cache size from your program instead
* of using our cache size control code.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Freset_mdc_hit_rate_stats(hid_t file_id)
{
H5F_t *file; /* File object for file ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Reset the hit rate statistic */
if(H5AC_reset_cache_hit_rate_stats(file->shared->cache) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "can't reset cache hit rate")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Freset_mdc_hit_rate_stats() */
/*-------------------------------------------------------------------------
* Function: H5Fget_name
*
* Purpose: Gets the name of the file to which object OBJ_ID belongs.
* If `name' is non-NULL then write up to `size' bytes into that
* buffer and always return the length of the entry name.
* Otherwise `size' is ignored and the function does not store the name,
* just returning the number of characters required to store the name.
* If an error occurs then the buffer pointed to by `name' (NULL or non-NULL)
* is unchanged and the function returns a negative value.
*
* Note: This routine returns the name that was used to open the file,
* not the actual name after resolving symlinks, etc.
*
* Return: Success: The length of the file name
* Failure: Negative
*-------------------------------------------------------------------------
*/
ssize_t
H5Fget_name(hid_t obj_id, char *name/*out*/, size_t size)
{
H5F_t *f; /* Top file in mount hierarchy */
size_t len;
ssize_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE3("Zs", "ixz", obj_id, name, size);
/* For file IDs, get the file object directly */
/* (This prevents the H5G_loc() call from returning the file pointer for
* the top file in a mount hierarchy)
*/
if(H5I_get_type(obj_id) == H5I_FILE ) {
if(NULL == (f = (H5F_t *)H5I_object(obj_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
} /* end if */
else {
H5G_loc_t loc; /* Object location */
/* Get symbol table entry */
if(H5G_loc(obj_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a valid object ID")
f = loc.oloc->file;
} /* end else */
len = HDstrlen(H5F_OPEN_NAME(f));
if(name) {
HDstrncpy(name, H5F_OPEN_NAME(f), MIN(len + 1,size));
if(len >= size)
name[size-1]='\0';
} /* end if */
/* Set return value */
ret_value = (ssize_t)len;
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_name() */
/*-------------------------------------------------------------------------
* Function: H5Fget_info2
*
* Purpose: Gets general information about the file, including:
* 1. Get storage size for superblock extension if there is one.
* 2. Get the amount of btree and heap storage for entries
* in the SOHM table if there is one.
* 3. The amount of free space tracked in the file.
*
* Return: Success: non-negative on success
* Failure: Negative
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_info2(hid_t obj_id, H5F_info2_t *finfo)
{
H5F_t *f; /* Top file in mount hierarchy */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*x", obj_id, finfo);
/* Check args */
if(!finfo)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no info struct")
/* For file IDs, get the file object directly */
/* (This prevents the H5G_loc() call from returning the file pointer for
* the top file in a mount hierarchy)
*/
if(H5I_get_type(obj_id) == H5I_FILE ) {
if(NULL == (f = (H5F_t *)H5I_object(obj_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
} /* end if */
else {
H5G_loc_t loc; /* Object location */
/* Get symbol table entry */
if(H5G_loc(obj_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a valid object ID")
f = loc.oloc->file;
} /* end else */
HDassert(f->shared);
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Get the file info */
if(H5F__get_info(f, finfo) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to retrieve file info")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_info2() */
/*-------------------------------------------------------------------------
* Function: H5Fget_metadata_read_retry_info
*
* Purpose: To retrieve the collection of read retries for metadata items with checksum.
*
* Return: Success: non-negative on success
* Failure: Negative
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_metadata_read_retry_info(hid_t file_id, H5F_retry_info_t *info)
{
H5F_t *file; /* File object for file ID */
unsigned i, j; /* Local index variable */
size_t tot_size; /* Size of each retries[i] */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*x", file_id, info);
/* Check args */
if(!info)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no info struct")
/* Get the file pointer */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Copy the # of bins for "retries" array */
info->nbins = file->shared->retries_nbins;
/* Initialize the array of "retries" */
HDmemset(info->retries, 0, sizeof(info->retries));
/* Return if there are no bins -- no retries */
if(!info->nbins)
HGOTO_DONE(SUCCEED);
/* Calculate size for each retries[i] */
tot_size = info->nbins * sizeof(uint32_t);
/* Map and copy information to info's retries for metadata items with tracking for read retries */
j = 0;
for(i = 0; i < H5AC_NTYPES; i++) {
switch(i) {
case H5AC_OHDR_ID:
case H5AC_OHDR_CHK_ID:
case H5AC_BT2_HDR_ID:
case H5AC_BT2_INT_ID:
case H5AC_BT2_LEAF_ID:
case H5AC_FHEAP_HDR_ID:
case H5AC_FHEAP_DBLOCK_ID:
case H5AC_FHEAP_IBLOCK_ID:
case H5AC_FSPACE_HDR_ID:
case H5AC_FSPACE_SINFO_ID:
case H5AC_SOHM_TABLE_ID:
case H5AC_SOHM_LIST_ID:
case H5AC_EARRAY_HDR_ID:
case H5AC_EARRAY_IBLOCK_ID:
case H5AC_EARRAY_SBLOCK_ID:
case H5AC_EARRAY_DBLOCK_ID:
case H5AC_EARRAY_DBLK_PAGE_ID:
case H5AC_FARRAY_HDR_ID:
case H5AC_FARRAY_DBLOCK_ID:
case H5AC_FARRAY_DBLK_PAGE_ID:
case H5AC_SUPERBLOCK_ID:
HDassert(j < H5F_NUM_METADATA_READ_RETRY_TYPES);
if(file->shared->retries[i] != NULL) {
/* Allocate memory for retries[i]
*
* This memory should be released by the user with
* the H5free_memory() call.
*/
if(NULL == (info->retries[j] = (uint32_t *)H5MM_malloc(tot_size)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Copy the information */
HDmemcpy(info->retries[j], file->shared->retries[i], tot_size);
} /* end if */
/* Increment location in info->retries[] array */
j++;
break;
default:
break;
} /* end switch */
} /* end for */
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_metadata_read_retry_info() */
/*-------------------------------------------------------------------------
* Function: H5Fget_free_sections
*
* Purpose: To get free-space section information for free-space manager with
* TYPE that is associated with file FILE_ID.
* If SECT_INFO is null, this routine returns the total # of free-space
* sections.
*
* Return: Success: non-negative, the total # of free space sections
* Failure: negative
*-------------------------------------------------------------------------
*/
ssize_t
H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects,
H5F_sect_info_t *sect_info/*out*/)
{
H5F_t *file; /* Top file in mount hierarchy */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
ssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE4("Zs", "iFmzx", file_id, type, nsects, sect_info);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
if(sect_info && nsects == 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "nsects must be > 0")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Get the free-space section information in the file */
if((ret_value = H5F__get_free_sections(file, type, nsects, sect_info)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to check free space for file")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_free_sections() */
/*-------------------------------------------------------------------------
* Function: H5Fclear_elink_file_cache
*
* Purpose: Releases the external file cache associated with the
* provided file, potentially closing any cached files
* unless they are held open from somewhere\ else.
*
* Return: Success: non-negative
* Failure: negative
*-------------------------------------------------------------------------
*/
herr_t
H5Fclear_elink_file_cache(hid_t file_id)
{
H5F_t *file; /* File */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* See if there's an EFC */
if(file->shared->efc) {
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Release the EFC */
if(H5F__efc_release(file->shared->efc) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't release external file cache")
} /* end if */
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fclear_elink_file_cache() */
/*-------------------------------------------------------------------------
* Function: H5Fstart_swmr_write
*
* Purpose: To enable SWMR writing mode for the file
* 1) Refresh opened objects: part 1
* 2) Flush & reset accumulator
* 3) Mark the file in SWMR writing mode
* 4) Set metadata read attempts and retries info
* 5) Disable accumulator
* 6) Evict all cache entries except the superblock
* 7) Refresh opened objects (part 2)
* 8) Unlock the file
*
* Pre-conditions:
* 1) The file being opened has v3 superblock
* 2) The file is opened with H5F_ACC_RDWR
* 3) The file is not already marked for SWMR writing
* 4) Current implementaion for opened objects:
* --only allow datasets and groups without attributes
* --disallow named datatype with/without attributes
* --disallow opened attributes attached to objects
* NOTE: Currently, only opened groups and datasets are allowed
* when enabling SWMR via H5Fstart_swmr_write().
* Will later implement a different approach--
* set up flush dependency/proxy even for file opened without
* SWMR to resolve issues with opened objects.
*
* Return: Non-negative on success/negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fstart_swmr_write(hid_t file_id)
{
H5F_t *file; /* File info */
hbool_t ci_load = FALSE; /* whether MDC ci load requested */
hbool_t ci_write = FALSE; /* whether MDC CI write requested */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
/* Should have write permission */
if((H5F_INTENT(file) & H5F_ACC_RDWR) == 0)
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "no write intent on file")
if(file->shared->sblock->super_vers < HDF5_SUPERBLOCK_VERSION_3)
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file superblock version should be at least 3")
HDassert((file->shared->low_bound == H5F_LIBVER_V110) && (file->shared->high_bound == H5F_LIBVER_V110));
/* Should not be marked for SWMR writing mode already */
if(file->shared->sblock->status_flags & H5F_SUPER_SWMR_WRITE_ACCESS)
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file already in SWMR writing mode")
HDassert(file->shared->sblock->status_flags & H5F_SUPER_WRITE_ACCESS);
/* Check to see if cache image is enabled. Fail if so */
if(H5C_cache_image_status(file, &ci_load, &ci_write) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MDC cache image status")
if(ci_load || ci_write )
HGOTO_ERROR(H5E_FILE, H5E_UNSUPPORTED, FAIL, "can't have both SWMR and MDC cache image")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Set up collective metadata if appropriate */
if(H5CX_set_loc(file_id, TRUE) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info")
/* Call the internal routine */
if(H5F__start_swmr_write(file) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTCONVERT, FAIL, "unable to convert file format")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fstart_swmr_write() */
/*-------------------------------------------------------------------------
* Function: H5Fstart_mdc_logging
*
* Purpose: Start metadata cache logging operations for a file.
* - Logging must have been set up via the fapl.
*
* Return: Non-negative on success/Negative on errors
*-------------------------------------------------------------------------
*/
herr_t
H5Fstart_mdc_logging(hid_t file_id)
{
H5F_t *file; /* File info */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* Sanity check */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
/* Call mdc logging function */
if(H5C_start_logging(file->shared->cache) < 0)
HGOTO_ERROR(H5E_FILE, H5E_LOGFAIL, FAIL, "unable to start mdc logging")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fstart_mdc_logging() */
/*-------------------------------------------------------------------------
* Function: H5Fstop_mdc_logging
*
* Purpose: Stop metadata cache logging operations for a file.
* - Does not close the log file.
* - Logging must have been set up via the fapl.
*
* Return: Non-negative on success/Negative on errors
*-------------------------------------------------------------------------
*/
herr_t
H5Fstop_mdc_logging(hid_t file_id)
{
H5F_t *file; /* File info */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* Sanity check */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
/* Call mdc logging function */
if(H5C_stop_logging(file->shared->cache) < 0)
HGOTO_ERROR(H5E_FILE, H5E_LOGFAIL, FAIL, "unable to stop mdc logging")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fstop_mdc_logging() */
/*-------------------------------------------------------------------------
* Function: H5Fget_mdc_logging_status
*
* Purpose: Get the logging flags. is_enabled determines if logging was
* set up via the fapl. is_currently_logging determines if
* log messages are being recorded at this time.
*
* Return: Non-negative on success/Negative on errors
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mdc_logging_status(hid_t file_id, hbool_t *is_enabled,
hbool_t *is_currently_logging)
{
H5F_t *file; /* File info */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE3("e", "i*b*b", file_id, is_enabled, is_currently_logging);
/* Sanity check */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
/* Call mdc logging function */
if(H5C_get_logging_status(file->shared->cache, is_enabled, is_currently_logging) < 0)
HGOTO_ERROR(H5E_FILE, H5E_LOGFAIL, FAIL, "unable to get logging status")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_mdc_logging_status() */
/*-------------------------------------------------------------------------
* Function: H5Fset_libver_bounds
*
* Purpose: Set to a different low and high bounds while a file is open.
* This public routine is introduced in place of
* H5Fset_latest_format() starting release 1.10.2.
* See explanation for H5Fset_latest_format() in H5Fdeprec.c.
*
* Return: Non-negative on success/Negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fset_libver_bounds(hid_t file_id, H5F_libver_t low, H5F_libver_t high)
{
H5F_t *f; /* File */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE3("e", "iFvFv", file_id, low, high);
/* Check args */
if(NULL == (f = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "not a file ID")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Set up collective metadata if appropriate */
if(H5CX_set_loc(file_id, TRUE) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info")
/* Call internal set_libver_bounds function */
if(H5F__set_libver_bounds(f, low, high) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "cannot set low/high bounds")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fset_libver_bounds() */
/*-------------------------------------------------------------------------
* Function: H5Fformat_convert
*
* Purpose: Downgrade the superblock version to v2 and
* downgrade persistent file space to non-persistent
* for 1.8 library.
*
* Return: Non-negative on success/Negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fformat_convert(hid_t fid)
{
H5F_t *f; /* File to flush */
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", fid);
if(H5I_FILE != H5I_get_type(fid))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file or file object")
/* Get file object */
if(NULL == (f = (H5F_t *)H5I_object(fid)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier")
/* Set API context */
if(H5CX_push() < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set API context")
api_ctx_pushed = TRUE;
/* Set up collective metadata if appropriate */
if(H5CX_set_loc(fid, TRUE) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info")
/* Call the internal routine */
if(H5F__format_convert(f) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTCONVERT, FAIL, "unable to convert file format")
done:
if(api_ctx_pushed && H5CX_pop() < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTRESET, FAIL, "can't reset API context")
FUNC_LEAVE_API(ret_value)
} /* end H5Fformat_convert() */
/*-------------------------------------------------------------------------
* Function: H5Freset_page_buffering_stats
*
* Purpose: Resets statistics for the page buffer layer.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Freset_page_buffering_stats(hid_t file_id)
{
H5F_t *file; /* File to reset stats on */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object(file_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier")
if(NULL == file->shared->page_buf)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "page buffering not enabled on file")
/* Reset the statistics */
if(H5PB_reset_stats(file->shared->page_buf) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't reset stats for page buffering")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Freset_page_buffering_stats() */
/*-------------------------------------------------------------------------
* Function: H5Fget_page_buffering_stats
*
* Purpose: Retrieves statistics for the page buffer layer.
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_page_buffering_stats(hid_t file_id, unsigned accesses[2], unsigned hits[2],
unsigned misses[2], unsigned evictions[2], unsigned bypasses[2])
{
H5F_t *file; /* File object for file ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE6("e", "i*Iu*Iu*Iu*Iu*Iu", file_id, accesses, hits, misses, evictions,
bypasses);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
if(NULL == file->shared->page_buf)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "page buffering not enabled on file")
if(NULL == accesses || NULL == hits || NULL == misses || NULL == evictions || NULL == bypasses)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "NULL input parameters for stats")
/* Get the statistics */
if(H5PB_get_stats(file->shared->page_buf, accesses, hits, misses, evictions, bypasses) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't retrieve stats for page buffering")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_page_buffering_stats() */
/*-------------------------------------------------------------------------
* Function: H5Fget_mdc_image_info
*
* Purpose: Retrieves the image_addr and image_len for the cache image in the file.
* image_addr: --base address of the on disk metadata cache image
* --HADDR_UNDEF if no cache image
* image_len: --size of the on disk metadata cache image
* --zero if no cache image
*
* Return: Success: SUCCEED
* Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mdc_image_info(hid_t file_id, haddr_t *image_addr, hsize_t *image_len)
{
H5F_t *file; /* File object for file ID */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE3("e", "i*a*h", file_id, image_addr, image_len);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
if(NULL == image_addr || NULL == image_len)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "NULL image addr or image len")
/* Go get the address and size of the cache image */
if(H5AC_get_mdc_image_info(file->shared->cache, image_addr, image_len) < 0)
HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "can't retrieve cache image info")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_mdc_image_info() */
/*-------------------------------------------------------------------------
* Function: H5Fget_eoa
*
* Purpose: Returns the address of the first byte after the last
* allocated memory in the file.
* (See H5FDget_eoa() in H5FD.c)
*
* Return: Success: First byte after allocated memory.
* Failure: HADDR_UNDEF
*
* Return: Non-negative on success/Negative on errors
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_eoa(hid_t file_id, haddr_t *eoa)
{
H5F_t *file; /* File object for file ID */
haddr_t rel_eoa; /* Relative address of EOA */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*a", file_id, eoa);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
/* This public routine will work only for drivers with this feature enabled.*/
/* We might introduce a new feature flag in the future */
if(!H5F_HAS_FEATURE(file, H5FD_FEAT_SUPPORTS_SWMR_IO))
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "must use a SWMR-compatible VFD for this public routine")
/* The real work */
if(HADDR_UNDEF == (rel_eoa = H5FD_get_eoa(file->shared->lf, H5FD_MEM_DEFAULT)))
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "get_eoa request failed")
/* (Note compensating for base address subtraction in internal routine) */
if(eoa)
*eoa = rel_eoa + H5FD_get_base_addr(file->shared->lf);
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_eoa() */
/*-------------------------------------------------------------------------
* Function: H5Fincrement_filesize
*
* Purpose: Set the EOA for the file to the maximum of (EOA, EOF) + increment
*
* Return: Non-negative on success/Negative on errors
*-------------------------------------------------------------------------
*/
herr_t
H5Fincrement_filesize(hid_t file_id, hsize_t increment)
{
H5F_t *file; /* File object for file ID */
haddr_t max_eof_eoa; /* Maximum of the relative EOA & EOF */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "ih", file_id, increment);
/* Check args */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
/* This public routine will work only for drivers with this feature enabled.*/
/* We might introduce a new feature flag in the future */
if(!H5F_HAS_FEATURE(file, H5FD_FEAT_SUPPORTS_SWMR_IO))
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "must use a SWMR-compatible VFD for this public routine")
/* Get the maximum of EOA and EOF */
if(H5F__get_max_eof_eoa(file, &max_eof_eoa) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "file can't get max eof/eoa ")
/* Set EOA to the maximum value + increment */
/* H5FD_set_eoa() will add base_addr to max_eof_eoa */
if(H5FD_set_eoa(file->shared->lf, H5FD_MEM_DEFAULT, max_eof_eoa + increment) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "driver set_eoa request failed")
done:
FUNC_LEAVE_API(ret_value)
} /* H5Fincrement_filesize() */
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