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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5FAcache.c
*
* Purpose: Implement fixed array metadata cache methods.
*
*-------------------------------------------------------------------------
*/
/**********************/
/* Module Declaration */
/**********************/
#define H5FA_MODULE
/***********************/
/* Other Packages Used */
/***********************/
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5FApkg.h" /* Fixed Arrays */
#include "H5MFprivate.h" /* File memory management */
#include "H5Vprivate.h" /* Vectors and arrays */
#include "H5WBprivate.h" /* Wrapped Buffers */
/****************/
/* Local Macros */
/****************/
/* Fixed Array format version #'s */
#define H5FA_HDR_VERSION 0 /* Header */
#define H5FA_DBLOCK_VERSION 0 /* Data block */
/* Size of stack buffer for serialization buffers */
#define H5FA_HDR_BUF_SIZE 512
#define H5FA_DBLOCK_BUF_SIZE 512
#define H5FA_DBLK_PAGE_BUF_SIZE 512
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Package Typedefs */
/********************/
/********************/
/* Local Prototypes */
/********************/
/* Metadata cache (H5AC) callbacks */
static H5FA_hdr_t *H5FA__cache_hdr_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata);
static herr_t H5FA__cache_hdr_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5FA_hdr_t *hdr, unsigned * flags_ptr);
static herr_t H5FA__cache_hdr_dest(H5F_t *f, H5FA_hdr_t *hdr);
static herr_t H5FA__cache_hdr_clear(H5F_t *f, H5FA_hdr_t *hdr, hbool_t destroy);
static herr_t H5FA__cache_hdr_size(const H5F_t *f, const H5FA_hdr_t *hdr, size_t *size_ptr);
static H5FA_dblock_t *H5FA__cache_dblock_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata);
static herr_t H5FA__cache_dblock_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5FA_dblock_t *dblock, unsigned * flags_ptr);
static herr_t H5FA__cache_dblock_dest(H5F_t *f, H5FA_dblock_t *dblock);
static herr_t H5FA__cache_dblock_clear(H5F_t *f, H5FA_dblock_t *dblock, hbool_t destroy);
static herr_t H5FA__cache_dblock_notify(H5AC_notify_action_t action, H5FA_dblock_t *dblock);
static herr_t H5FA__cache_dblock_size(const H5F_t *f, const H5FA_dblock_t *dblock, size_t *size_ptr);
static H5FA_dblk_page_t *H5FA__cache_dblk_page_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata);
static herr_t H5FA__cache_dblk_page_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5FA_dblk_page_t *dblk_page, unsigned * flags_ptr);
static herr_t H5FA__cache_dblk_page_dest(H5F_t *f, H5FA_dblk_page_t *dblk_page);
static herr_t H5FA__cache_dblk_page_clear(H5F_t *f, H5FA_dblk_page_t *dblk_page, hbool_t destroy);
static herr_t H5FA__cache_dblk_page_size(const H5F_t *f, const H5FA_dblk_page_t *dblk_page, size_t *size_ptr);
/*********************/
/* Package Variables */
/*********************/
/* H5FA header inherits cache-like properties from H5AC */
const H5AC_class_t H5AC_FARRAY_HDR[1] = {{
H5AC_FARRAY_HDR_ID,
(H5AC_load_func_t)H5FA__cache_hdr_load,
(H5AC_flush_func_t)H5FA__cache_hdr_flush,
(H5AC_dest_func_t)H5FA__cache_hdr_dest,
(H5AC_clear_func_t)H5FA__cache_hdr_clear,
(H5AC_notify_func_t)NULL,
(H5AC_size_func_t)H5FA__cache_hdr_size,
}};
/* H5FA data block inherits cache-like properties from H5AC */
const H5AC_class_t H5AC_FARRAY_DBLOCK[1] = {{
H5AC_FARRAY_DBLOCK_ID,
(H5AC_load_func_t)H5FA__cache_dblock_load,
(H5AC_flush_func_t)H5FA__cache_dblock_flush,
(H5AC_dest_func_t)H5FA__cache_dblock_dest,
(H5AC_clear_func_t)H5FA__cache_dblock_clear,
(H5AC_notify_func_t)H5FA__cache_dblock_notify,
(H5AC_size_func_t)H5FA__cache_dblock_size,
}};
/* H5FA data block page inherits cache-like properties from H5AC */
const H5AC_class_t H5AC_FARRAY_DBLK_PAGE[1] = {{
H5AC_FARRAY_DBLK_PAGE_ID,
(H5AC_load_func_t)H5FA__cache_dblk_page_load,
(H5AC_flush_func_t)H5FA__cache_dblk_page_flush,
(H5AC_dest_func_t)H5FA__cache_dblk_page_dest,
(H5AC_clear_func_t)H5FA__cache_dblk_page_clear,
(H5AC_notify_func_t)NULL,
(H5AC_size_func_t)H5FA__cache_dblk_page_size,
}};
/*****************************/
/* Library Private Variables */
/*****************************/
/*******************/
/* Local Variables */
/*******************/
/*-------------------------------------------------------------------------
* Function: H5FA__cache_hdr_load
*
* Purpose: Loads a fixed array header from the disk.
*
* Return: Success: Pointer to a new fixed array
* Failure: NULL
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
H5FA_hdr_t *, NULL, NULL,
H5FA__cache_hdr_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata))
/* Local variables */
H5FA_cls_id_t id; /* ID of fixed array class, as found in file */
H5FA_hdr_t *hdr = NULL; /* Fixed array info */
size_t size; /* Header size */
H5WB_t *wb = NULL; /* Wrapped buffer for header data */
uint8_t hdr_buf[H5FA_HDR_BUF_SIZE]; /* Buffer for header */
uint8_t *buf; /* Pointer to header buffer */
const uint8_t *p; /* Pointer into raw data buffer */
uint32_t stored_chksum; /* Stored metadata checksum value */
uint32_t computed_chksum; /* Computed metadata checksum value */
/* Check arguments */
HDassert(f);
HDassert(H5F_addr_defined(addr));
/* Allocate space for the fixed array data structure */
if(NULL == (hdr = H5FA__hdr_alloc(f)))
H5E_THROW(H5E_CANTALLOC, "memory allocation failed for fixed array shared header")
/* Set the fixed array header's address */
hdr->addr = addr;
/* Wrap the local buffer for serialized info */
if(NULL == (wb = H5WB_wrap(hdr_buf, sizeof(hdr_buf))))
H5E_THROW(H5E_CANTINIT, "can't wrap buffer")
/* Compute the 'base' size of the fixed array header on disk */
size = H5FA_HEADER_SIZE(hdr);
/* Get a pointer to a buffer that's large enough for serialized header */
if(NULL == (buf = (uint8_t *)H5WB_actual(wb, size)))
H5E_THROW(H5E_CANTGET, "can't get actual buffer")
/* Read header from disk */
if(H5F_block_read(f, H5FD_MEM_FARRAY_HDR, addr, size, dxpl_id, buf) < 0)
H5E_THROW(H5E_READERROR, "can't read fixed array header")
/* Get temporary pointer to serialized header */
p = buf;
/* Magic number */
if(HDmemcmp(p, H5FA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC))
H5E_THROW(H5E_BADVALUE, "wrong fixed array header signature")
p += H5_SIZEOF_MAGIC;
/* Version */
if(*p++ != H5FA_HDR_VERSION)
H5E_THROW(H5E_VERSION, "wrong fixed array header version")
/* Fixed array class */
id = (H5FA_cls_id_t)*p++;
if(id >= H5FA_NUM_CLS_ID)
H5E_THROW(H5E_BADTYPE, "incorrect fixed array class")
hdr->cparam.cls = H5FA_client_class_g[id];
/* General array creation/configuration information */
hdr->cparam.raw_elmt_size = *p++; /* Element size in file (in bytes) */
hdr->cparam.max_dblk_page_nelmts_bits = *p++; /* Log2(Max. # of elements in data block page) -
i.e. # of bits needed to store max. # of
elements in data block page. */
/* Array statistics */
H5F_DECODE_LENGTH(f, p, hdr->cparam.nelmts); /* Number of elements */
/* Internal information */
H5F_addr_decode(f, &p, &hdr->dblk_addr); /* Address of index block */
/* Check for data block */
if(H5F_addr_defined(hdr->dblk_addr)) {
H5FA_dblock_t dblock; /* Fake data block for computing size */
size_t dblk_page_nelmts; /* # of elements per data block page */
/* Set up fake data block for computing size on disk */
dblock.hdr = hdr;
dblock.dblk_page_init_size = 0;
dblock.npages = 0;
dblk_page_nelmts = (size_t)1 << hdr->cparam.max_dblk_page_nelmts_bits;
if(hdr->cparam.nelmts > dblk_page_nelmts) {
dblock.npages = (size_t)(((hdr->cparam.nelmts + dblk_page_nelmts) - 1) / dblk_page_nelmts);
dblock.dblk_page_init_size = (dblock.npages + 7) / 8;
} /* end if */
/* Compute Fixed Array data block size for hdr statistics */
hdr->stats.dblk_size = (size_t)H5FA_DBLOCK_SIZE(&dblock);
} /* end if */
/* Sanity check */
/* (allow for checksum not decoded yet) */
HDassert((size_t)(p - buf) == (size - H5FA_SIZEOF_CHKSUM));
/* Compute checksum on entire header */
/* (including the filter information, if present) */
computed_chksum = H5_checksum_metadata(buf, (size_t)(p - buf), 0);
/* Metadata checksum */
UINT32DECODE(p, stored_chksum);
/* Sanity check */
HDassert((size_t)(p - buf) == size);
/* Verify checksum */
if(stored_chksum != computed_chksum)
H5E_THROW(H5E_BADVALUE, "incorrect metadata checksum for fixed array header")
/* Finish initializing fixed array header */
if(H5FA__hdr_init(hdr, udata) < 0)
H5E_THROW(H5E_CANTINIT, "initialization failed for fixed array header")
HDassert(hdr->size == size);
/* Set return value */
ret_value = hdr;
CATCH
/* Release resources */
if(wb && H5WB_unwrap(wb) < 0)
H5E_THROW(H5E_CLOSEERROR, "can't close wrapped buffer")
if(!ret_value)
if(hdr && H5FA__hdr_dest(hdr) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array header")
END_FUNC(STATIC) /* end H5FA__cache_hdr_load() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_hdr_flush
*
* Purpose: Flushes a dirty fixed array header to disk.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_hdr_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr,
H5FA_hdr_t *hdr, unsigned UNUSED * flags_ptr))
H5WB_t *wb = NULL; /* Wrapped buffer for header data */
uint8_t hdr_buf[H5FA_HDR_BUF_SIZE]; /* Buffer for header */
/* check arguments */
HDassert(f);
HDassert(H5F_addr_defined(addr));
HDassert(hdr);
if(hdr->cache_info.is_dirty) {
uint8_t *buf; /* Temporary raw data buffer */
uint8_t *p; /* Pointer into raw data buffer */
size_t size; /* Header size on disk */
uint32_t metadata_chksum; /* Computed metadata checksum value */
/* Wrap the local buffer for serialized header info */
if(NULL == (wb = H5WB_wrap(hdr_buf, sizeof(hdr_buf))))
H5E_THROW(H5E_CANTINIT, "can't wrap buffer")
/* Compute the size of the array header on disk */
size = hdr->size;
/* Get a pointer to a buffer that's large enough for serialized header */
if(NULL == (buf = (uint8_t *)H5WB_actual(wb, size)))
H5E_THROW(H5E_CANTGET, "can't get actual buffer")
/* Get temporary pointer to serialized header */
p = buf;
/* Magic number */
HDmemcpy(p, H5FA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC);
p += H5_SIZEOF_MAGIC;
/* Version # */
*p++ = H5FA_HDR_VERSION;
/* Fixed array type */
*p++ = hdr->cparam.cls->id;
/* General array creation/configuration information */
*p++ = hdr->cparam.raw_elmt_size; /* Element size in file (in bytes) */
*p++ = hdr->cparam.max_dblk_page_nelmts_bits; /* Log2(Max. # of elements in data block page) - i.e. # of bits needed to store max. # of elements in data block page */
/* Array statistics */
H5F_ENCODE_LENGTH(f, p, hdr->stats.nelmts); /* Number of elements for the fixed array */
/* Internal information */
H5F_addr_encode(f, &p, hdr->dblk_addr); /* Address of fixed array data block */
/* Compute metadata checksum */
metadata_chksum = H5_checksum_metadata(buf, (size_t)(p - buf), 0);
/* Metadata checksum */
UINT32ENCODE(p, metadata_chksum);
/* Write the array header. */
HDassert((size_t)(p - buf) == size);
if(H5F_block_write(f, H5FD_MEM_FARRAY_HDR, addr, size, dxpl_id, buf) < 0)
H5E_THROW(H5E_WRITEERROR, "unable to save fixed array header to disk")
hdr->cache_info.is_dirty = FALSE;
} /* end if */
if(destroy)
if(H5FA__cache_hdr_dest(f, hdr) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array header")
CATCH
/* Release resources */
if(wb && H5WB_unwrap(wb) < 0)
H5E_THROW(H5E_CLOSEERROR, "can't close wrapped buffer")
END_FUNC(STATIC) /* end H5FA__cache_hdr_flush() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_hdr_dest
*
* Purpose: Destroys a fixed array header in memory.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_hdr_dest(H5F_t *f, H5FA_hdr_t *hdr))
/* Check arguments */
HDassert(f);
HDassert(hdr);
/* Verify that header is clean */
HDassert(hdr->cache_info.is_dirty == FALSE);
/* If we're going to free the space on disk, the address must be valid */
HDassert(!hdr->cache_info.free_file_space_on_destroy || H5F_addr_defined(hdr->cache_info.addr));
/* Check for freeing file space for fixed array header */
if(hdr->cache_info.free_file_space_on_destroy) {
/* Sanity check address */
HDassert(H5F_addr_eq(hdr->addr, hdr->cache_info.addr));
/* Release the space on disk */
/* (XXX: Nasty usage of internal DXPL value! -QAK) */
if(H5MF_xfree(f, H5FD_MEM_FARRAY_HDR, H5AC_dxpl_id, hdr->cache_info.addr, (hsize_t)hdr->size) < 0)
H5E_THROW(H5E_CANTFREE, "unable to free fixed array header")
} /* end if */
/* Release the fixed array header */
if(H5FA__hdr_dest(hdr) < 0)
H5E_THROW(H5E_CANTFREE, "can't free fixed array header")
CATCH
END_FUNC(STATIC) /* end H5FA__cache_hdr_dest() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_hdr_clear
*
* Purpose: Mark a fixed array header in memory as non-dirty.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_hdr_clear(H5F_t *f, H5FA_hdr_t *hdr, hbool_t destroy))
/* Sanity check */
HDassert(hdr);
/* Reset the dirty flag. */
hdr->cache_info.is_dirty = FALSE;
if(destroy)
if(H5FA__cache_hdr_dest(f, hdr) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array header")
CATCH
END_FUNC(STATIC) /* end H5FA__cache_hdr_clear() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_hdr_size
*
* Purpose: Compute the size in bytes of a fixed array header
* on disk, and return it in *size_ptr. On failure,
* the value of *size_ptr is undefined.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
BEGIN_FUNC(STATIC, NOERR,
herr_t, SUCCEED, -,
H5FA__cache_hdr_size(const H5F_t UNUSED *f, const H5FA_hdr_t *hdr,
size_t *size_ptr))
/* Sanity check */
HDassert(f);
HDassert(hdr);
HDassert(size_ptr);
/* Set size value */
*size_ptr = hdr->size;
END_FUNC(STATIC) /* end H5FA__cache_hdr_size() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblock_load
*
* Purpose: Loads a fixed array data block from the disk.
*
* Return: Success: Pointer to a new fixed array data block
* Failure: NULL
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
H5FA_dblock_t *, NULL, NULL,
H5FA__cache_dblock_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_udata))
/* Local variables */
H5FA_dblock_t *dblock = NULL; /* Data block info */
H5FA_dblock_cache_ud_t *udata = (H5FA_dblock_cache_ud_t *)_udata; /* User data for loading data block */
size_t size; /* Data block size */
H5WB_t *wb = NULL; /* Wrapped buffer for data block data */
uint8_t dblock_buf[H5FA_DBLOCK_BUF_SIZE]; /* Buffer for data block */
uint8_t *buf; /* Pointer to data block buffer */
const uint8_t *p; /* Pointer into raw data buffer */
uint32_t stored_chksum; /* Stored metadata checksum value */
uint32_t computed_chksum; /* Computed metadata checksum value */
haddr_t arr_addr; /* Address of array header in the file */
/* Sanity check */
HDassert(f);
HDassert(H5F_addr_defined(addr));
HDassert(udata && udata->hdr && udata->nelmts > 0);
/* Allocate the fixed array data block */
if(NULL == (dblock = H5FA__dblock_alloc(udata->hdr, udata->nelmts)))
H5E_THROW(H5E_CANTALLOC, "memory allocation failed for fixed array data block")
/* Set the fixed array data block's information */
dblock->addr = addr;
/* Wrap the local buffer for serialized info */
if(NULL == (wb = H5WB_wrap(dblock_buf, sizeof(dblock_buf))))
H5E_THROW(H5E_CANTINIT, "can't wrap buffer")
/* Compute the size of the fixed array data block on disk */
if(!dblock->npages)
size = (size_t)H5FA_DBLOCK_SIZE(dblock);
else
size = H5FA_DBLOCK_PREFIX_SIZE(dblock);
/* Get a pointer to a buffer that's large enough for serialized info */
if(NULL == (buf = (uint8_t *)H5WB_actual(wb, size)))
H5E_THROW(H5E_CANTGET, "can't get actual buffer")
/* Read data block from disk */
if(H5F_block_read(f, H5FD_MEM_FARRAY_DBLOCK, addr, size, dxpl_id, buf) < 0)
H5E_THROW(H5E_READERROR, "can't read fixed array data block")
/* Get temporary pointer to serialized header */
p = buf;
/* Magic number */
if(HDmemcmp(p, H5FA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC))
H5E_THROW(H5E_BADVALUE, "wrong fixed array data block signature")
p += H5_SIZEOF_MAGIC;
/* Version */
if(*p++ != H5FA_DBLOCK_VERSION)
H5E_THROW(H5E_VERSION, "wrong fixed array data block version")
/* Fixed array type */
if(*p++ != (uint8_t)udata->hdr->cparam.cls->id)
H5E_THROW(H5E_BADTYPE, "incorrect fixed array class")
/* Address of header for array that owns this block (just for file integrity checks) */
H5F_addr_decode(f, &p, &arr_addr);
if(H5F_addr_ne(arr_addr, udata->hdr->addr))
H5E_THROW(H5E_BADVALUE, "wrong fixed array header address")
/* Page initialization flags */
if(dblock->npages > 0) {
HDmemcpy(dblock->dblk_page_init, p, dblock->dblk_page_init_size);
p += dblock->dblk_page_init_size;
} /* end if */
/* Only decode elements if the data block is not paged */
if(!dblock->npages) {
/* Decode elements in data block */
/* Convert from raw elements on disk into native elements in memory */
if((udata->hdr->cparam.cls->decode)(p, dblock->elmts, (size_t)udata->nelmts, udata->hdr->cb_ctx) < 0)
H5E_THROW(H5E_CANTDECODE, "can't decode fixed array data elements")
p += (udata->nelmts * udata->hdr->cparam.raw_elmt_size);
} /* end if */
/* Sanity check */
/* (allow for checksum not decoded yet) */
HDassert((size_t)(p - buf) == (size - H5FA_SIZEOF_CHKSUM));
/* Set the data block's size */
dblock->size = H5FA_DBLOCK_SIZE(dblock);
/* Compute checksum on data block */
computed_chksum = H5_checksum_metadata(buf, (size_t)(p - buf), 0);
/* Metadata checksum */
UINT32DECODE(p, stored_chksum);
/* Sanity check */
HDassert((size_t)(p - buf) == size);
/* Verify checksum */
if(stored_chksum != computed_chksum)
H5E_THROW(H5E_BADVALUE, "incorrect metadata checksum for fixed array data block")
/* Set return value */
ret_value = dblock;
CATCH
/* Release resources */
if(wb && H5WB_unwrap(wb) < 0)
H5E_THROW(H5E_CLOSEERROR, "can't close wrapped buffer")
if(!ret_value)
if(dblock && H5FA__dblock_dest(dblock) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array data block")
END_FUNC(STATIC) /* end H5FA__cache_dblock_load() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblock_flush
*
* Purpose: Flushes a dirty fixed array data block to disk.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblock_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr,
H5FA_dblock_t *dblock, unsigned UNUSED * flags_ptr))
/* Local variables */
H5WB_t *wb = NULL; /* Wrapped buffer for serializing data */
uint8_t ser_buf[H5FA_DBLOCK_BUF_SIZE]; /* Serialization buffer */
/* Sanity check */
HDassert(f);
HDassert(H5F_addr_defined(addr));
HDassert(dblock);
HDassert(dblock->hdr);
if(dblock->cache_info.is_dirty) {
uint8_t *buf; /* Temporary raw data buffer */
uint8_t *p; /* Pointer into raw data buffer */
size_t size; /* Index block size on disk */
uint32_t metadata_chksum; /* Computed metadata checksum value */
/* Wrap the local buffer for serialized info */
if(NULL == (wb = H5WB_wrap(ser_buf, sizeof(ser_buf))))
H5E_THROW(H5E_CANTINIT, "can't wrap buffer")
/* Compute the size of the data block on disk */
if(!dblock->npages)
size = (size_t)dblock->size;
else
size = H5FA_DBLOCK_PREFIX_SIZE(dblock);
/* Get a pointer to a buffer that's large enough for serialized info */
if(NULL == (buf = (uint8_t *)H5WB_actual(wb, size)))
H5E_THROW(H5E_CANTGET, "can't get actual buffer")
/* Get temporary pointer to serialized info */
p = buf;
/* Magic number */
HDmemcpy(p, H5FA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC);
p += H5_SIZEOF_MAGIC;
/* Version # */
*p++ = H5FA_DBLOCK_VERSION;
/* Fixed array type */
*p++ = dblock->hdr->cparam.cls->id;
/* Address of array header for array which owns this block */
H5F_addr_encode(f, &p, dblock->hdr->addr);
/* Page init flags */
if(dblock->npages > 0) {
/* Store the 'page init' bitmasks */
HDmemcpy(p, dblock->dblk_page_init, dblock->dblk_page_init_size);
p += dblock->dblk_page_init_size;
} /* end if */
/* Only encode elements if the data block is not paged */
if(!dblock->npages) {
/* Encode elements in data block */
/* Convert from native elements in memory into raw elements on disk */
H5_CHECK_OVERFLOW(dblock->hdr->cparam.nelmts, /* From: */hsize_t, /* To: */size_t);
if((dblock->hdr->cparam.cls->encode)(p, dblock->elmts, (size_t)dblock->hdr->cparam.nelmts, dblock->hdr->cb_ctx) < 0)
H5E_THROW(H5E_CANTENCODE, "can't encode fixed array data elements")
p += (dblock->hdr->cparam.nelmts * dblock->hdr->cparam.raw_elmt_size);
} /* end if */
/* Compute metadata checksum */
metadata_chksum = H5_checksum_metadata(buf, (size_t)(p - buf), 0);
/* Metadata checksum */
UINT32ENCODE(p, metadata_chksum);
/* Write the data block */
HDassert((size_t)(p - buf) == size);
if(H5F_block_write(f, H5FD_MEM_FARRAY_DBLOCK, addr, size, dxpl_id, buf) < 0)
H5E_THROW(H5E_WRITEERROR, "unable to save fixed array data block to disk")
dblock->cache_info.is_dirty = FALSE;
} /* end if */
if(destroy)
if(H5FA__cache_dblock_dest(f, dblock) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array data block")
CATCH
/* Release resources */
if(wb && H5WB_unwrap(wb) < 0)
H5E_THROW(H5E_CLOSEERROR, "can't close wrapped buffer")
END_FUNC(STATIC) /* end H5FA__cache_dblock_flush() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblock_dest
*
* Purpose: Destroys a fixed array data block in memory.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblock_dest(H5F_t *f, H5FA_dblock_t *dblock))
/* Sanity check */
HDassert(f);
HDassert(dblock);
/* Verify that data block is clean */
HDassert(dblock->cache_info.is_dirty == FALSE);
/* If we're going to free the space on disk, the address must be valid */
HDassert(!dblock->cache_info.free_file_space_on_destroy || H5F_addr_defined(dblock->cache_info.addr));
/* Check for freeing file space for fixed array data block */
if(dblock->cache_info.free_file_space_on_destroy) {
/* Sanity check address */
HDassert(H5F_addr_eq(dblock->addr, dblock->cache_info.addr));
/* Release the space on disk */
/* (Includes space for pages!) */
/* (XXX: Nasty usage of internal DXPL value! -QAK) */
if(H5MF_xfree(f, H5FD_MEM_FARRAY_DBLOCK, H5AC_dxpl_id, dblock->cache_info.addr, (hsize_t)dblock->size) < 0)
H5E_THROW(H5E_CANTFREE, "unable to free fixed array data block")
} /* end if */
/* Release the data block */
if(H5FA__dblock_dest(dblock) < 0)
H5E_THROW(H5E_CANTFREE, "can't free fixed array data block")
CATCH
END_FUNC(STATIC) /* end H5FA__cache_dblock_dest() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblock_clear
*
* Purpose: Mark a fixed array data block in memory as non-dirty.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblock_clear(H5F_t *f, H5FA_dblock_t *dblock, hbool_t destroy))
/* Sanity check */
HDassert(dblock);
/* Reset the dirty flag */
dblock->cache_info.is_dirty = FALSE;
if(destroy)
if(H5FA__cache_dblock_dest(f, dblock) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array data block")
CATCH
END_FUNC(STATIC) /* end H5FA__cache_dblock_clear() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblock_notify
*
* Purpose: Handle cache action notifications
*
* Return: SUCCEED/FAIL
*
* Programmer: Dana Robinson
* derobins@hdfgroup.org
* Fall 2012
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblock_notify(H5AC_notify_action_t action, H5FA_dblock_t *dblock))
/* Sanity check */
HDassert(dblock);
/* Check if the file was opened with SWMR-write access */
if(dblock->hdr->swmr_write) {
/* Determine which action to take */
switch(action) {
case H5AC_NOTIFY_ACTION_AFTER_INSERT:
/* Create flush dependency on extensible array header */
if(H5FA__create_flush_depend((H5AC_info_t *)dblock->hdr, (H5AC_info_t *)dblock) < 0)
H5E_THROW(H5E_CANTDEPEND, "unable to create flush dependency between data block and header, address = %llu", (unsigned long long)dblock->addr)
break;
case H5AC_NOTIFY_ACTION_BEFORE_EVICT:
/* Destroy flush dependency on extensible array header */
if(H5FA__destroy_flush_depend((H5AC_info_t *)dblock->hdr, (H5AC_info_t *)dblock) < 0)
H5E_THROW(H5E_CANTUNDEPEND, "unable to destroy flush dependency between data block and header, address = %llu", (unsigned long long)dblock->addr)
break;
default:
#ifdef NDEBUG
H5E_THROW(H5E_BADVALUE, "unknown action from metadata cache")
#else /* NDEBUG */
HDassert(0 && "Unknown action?!?");
#endif /* NDEBUG */
} /* end switch */
} /* end if */
CATCH
END_FUNC(STATIC) /* end H5FA__cache_dblock_notify() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblock_size
*
* Purpose: Compute the size in bytes of a fixed array data block
* on disk, and return it in *size_ptr. On failure,
* the value of *size_ptr is undefined.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
BEGIN_FUNC(STATIC, NOERR,
herr_t, SUCCEED, -,
H5FA__cache_dblock_size(const H5F_t UNUSED *f, const H5FA_dblock_t *dblock,
size_t *size_ptr))
/* Sanity check */
HDassert(f);
HDassert(dblock);
HDassert(size_ptr);
/* Set size value */
if(!dblock->npages)
*size_ptr = (size_t)dblock->size;
else
*size_ptr = H5FA_DBLOCK_PREFIX_SIZE(dblock);
END_FUNC(STATIC) /* end H5FA__cache_dblock_size() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblk_page_load
*
* Purpose: Loads a fixed array data block page from the disk.
*
* Return: Success: Pointer to a new fixed array data block page
* Failure: NULL
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
H5FA_dblk_page_t *, NULL, NULL,
H5FA__cache_dblk_page_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_udata))
/* Local variables */
H5FA_dblk_page_t *dblk_page = NULL; /* Data block page info */
H5FA_dblk_page_cache_ud_t *udata = (H5FA_dblk_page_cache_ud_t *)_udata; /* User data for loading data block page */
size_t size; /* Data block page size */
H5WB_t *wb = NULL; /* Wrapped buffer for data block page data */
uint8_t dblk_page_buf[H5FA_DBLK_PAGE_BUF_SIZE]; /* Buffer for data block page */
uint8_t *buf; /* Pointer to data block page buffer */
const uint8_t *p; /* Pointer into raw data buffer */
uint32_t stored_chksum; /* Stored metadata checksum value */
uint32_t computed_chksum; /* Computed metadata checksum value */
/* Sanity check */
HDassert(f);
HDassert(H5F_addr_defined(addr));
HDassert(udata && udata->hdr && udata->nelmts > 0);
#ifdef QAK
HDfprintf(stderr, "%s: addr = %a\n", FUNC, addr);
#endif /* QAK */
/* Allocate the fixed array data block page */
if(NULL == (dblk_page = H5FA__dblk_page_alloc(udata->hdr, udata->nelmts)))
H5E_THROW(H5E_CANTALLOC, "memory allocation failed for fixed array data block page")
/* Set the fixed array data block's information */
dblk_page->addr = addr;
/* Wrap the local buffer for serialized info */
if(NULL == (wb = H5WB_wrap(dblk_page_buf, sizeof(dblk_page_buf))))
H5E_THROW(H5E_CANTINIT, "can't wrap buffer")
/* Compute the size of the fixed array data block page on disk */
size = H5FA_DBLK_PAGE_SIZE(dblk_page, udata->nelmts);
/* Get a pointer to a buffer that's large enough for serialized info */
if(NULL == (buf = (uint8_t *)H5WB_actual(wb, size)))
H5E_THROW(H5E_CANTGET, "can't get actual buffer")
/* Read data block page from disk */
if(H5F_block_read(f, H5FD_MEM_FARRAY_DBLK_PAGE, addr, size, dxpl_id, buf) < 0)
H5E_THROW(H5E_READERROR, "can't read fixed array data block page")
/* Get temporary pointer to serialized header */
p = buf;
/* Internal information */
/* Decode elements in data block page */
/* Convert from raw elements on disk into native elements in memory */
if((udata->hdr->cparam.cls->decode)(p, dblk_page->elmts, udata->nelmts, udata->hdr->cb_ctx) < 0)
H5E_THROW(H5E_CANTDECODE, "can't decode fixed array data elements")
p += (udata->nelmts * udata->hdr->cparam.raw_elmt_size);
/* Sanity check */
/* (allow for checksum not decoded yet) */
HDassert((size_t)(p - buf) == (size - H5FA_SIZEOF_CHKSUM));
/* Set the data block page's size */
dblk_page->size = size;
/* Compute checksum on data block */
computed_chksum = H5_checksum_metadata(buf, (size_t)(p - buf), 0);
/* Metadata checksum */
UINT32DECODE(p, stored_chksum);
/* Sanity check */
HDassert((size_t)(p - buf) == dblk_page->size);
/* Verify checksum */
if(stored_chksum != computed_chksum)
H5E_THROW(H5E_BADVALUE, "incorrect metadata checksum for fixed array data block page")
/* Set return value */
ret_value = dblk_page;
CATCH
/* Release resources */
if(wb && H5WB_unwrap(wb) < 0)
H5E_THROW(H5E_CLOSEERROR, "can't close wrapped buffer")
if(!ret_value)
if(dblk_page && H5FA__dblk_page_dest(dblk_page) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array data block page")
END_FUNC(STATIC) /* end H5FA__cache_dblk_page_load() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblk_page_flush
*
* Purpose: Flushes a dirty fixed array data block page to disk.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblk_page_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr,
H5FA_dblk_page_t *dblk_page, unsigned UNUSED * flags_ptr))
/* Local variables */
H5WB_t *wb = NULL; /* Wrapped buffer for serializing data */
uint8_t ser_buf[H5FA_DBLK_PAGE_BUF_SIZE]; /* Serialization buffer */
/* Sanity check */
HDassert(f);
HDassert(H5F_addr_defined(addr));
HDassert(dblk_page);
HDassert(dblk_page->hdr);
if(dblk_page->cache_info.is_dirty) {
uint8_t *buf; /* Temporary raw data buffer */
uint8_t *p; /* Pointer into raw data buffer */
size_t size; /* Index block size on disk */
uint32_t metadata_chksum; /* Computed metadata checksum value */
/* Wrap the local buffer for serialized info */
if(NULL == (wb = H5WB_wrap(ser_buf, sizeof(ser_buf))))
H5E_THROW(H5E_CANTINIT, "can't wrap buffer")
/* Compute the size of the data block on disk */
size = dblk_page->size;
/* Get a pointer to a buffer that's large enough for serialized info */
if(NULL == (buf = (uint8_t *)H5WB_actual(wb, size)))
H5E_THROW(H5E_CANTGET, "can't get actual buffer")
/* Get temporary pointer to serialized info */
p = buf;
/* Internal information */
/* Encode elements in data block page */
/* Convert from native elements in memory into raw elements on disk */
if((dblk_page->hdr->cparam.cls->encode)(p, dblk_page->elmts, dblk_page->nelmts, dblk_page->hdr->cb_ctx) < 0)
H5E_THROW(H5E_CANTENCODE, "can't encode fixed array data elements")
p += (dblk_page->nelmts * dblk_page->hdr->cparam.raw_elmt_size);
/* Compute metadata checksum */
metadata_chksum = H5_checksum_metadata(buf, (size_t)(p - buf), 0);
/* Metadata checksum */
UINT32ENCODE(p, metadata_chksum);
/* Write the data block */
HDassert((size_t)(p - buf) == size);
if(H5F_block_write(f, H5FD_MEM_FARRAY_DBLK_PAGE, addr, size, dxpl_id, buf) < 0)
H5E_THROW(H5E_WRITEERROR, "unable to save fixed array data block page to disk")
dblk_page->cache_info.is_dirty = FALSE;
} /* end if */
if(destroy)
if(H5FA__cache_dblk_page_dest(f, dblk_page) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array data block page")
CATCH
/* Release resources */
if(wb && H5WB_unwrap(wb) < 0)
H5E_THROW(H5E_CLOSEERROR, "can't close wrapped buffer")
END_FUNC(STATIC) /* end H5FA__cache_dblk_page_flush() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblk_page_dest
*
* Purpose: Destroys a fixed array data block page in memory.
*
* Note: Does _not_ free the space for the page on disk, that is
* handled through the data block that "owns" the page.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblk_page_dest(H5F_t UNUSED *f, H5FA_dblk_page_t *dblk_page))
/* Sanity check */
HDassert(f);
HDassert(dblk_page);
/* Verify that data block page is clean */
HDassert(dblk_page->cache_info.is_dirty == FALSE);
/* Release the data block page */
if(H5FA__dblk_page_dest(dblk_page) < 0)
H5E_THROW(H5E_CANTFREE, "can't free fixed array data block page")
CATCH
END_FUNC(STATIC) /* end H5FA__cache_dblk_page_dest() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblk_page_clear
*
* Purpose: Mark a fixed array data block page in memory as non-dirty.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
BEGIN_FUNC(STATIC, ERR,
herr_t, SUCCEED, FAIL,
H5FA__cache_dblk_page_clear(H5F_t *f, H5FA_dblk_page_t *dblk_page, hbool_t destroy))
/* Sanity check */
HDassert(dblk_page);
/* Reset the dirty flag */
dblk_page->cache_info.is_dirty = FALSE;
if(destroy)
if(H5FA__cache_dblk_page_dest(f, dblk_page) < 0)
H5E_THROW(H5E_CANTFREE, "unable to destroy fixed array data block page")
CATCH
END_FUNC(STATIC) /* end H5FA__cache_dblk_page_clear() */
/*-------------------------------------------------------------------------
* Function: H5FA__cache_dblk_page_size
*
* Purpose: Compute the size in bytes of a fixed array data block page
* on disk, and return it in *size_ptr. On failure,
* the value of *size_ptr is undefined.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Vailin Choi
* Thursday, April 30, 2009
*
*-------------------------------------------------------------------------
*/
/* ARGSUSED */
BEGIN_FUNC(STATIC, NOERR,
herr_t, SUCCEED, -,
H5FA__cache_dblk_page_size(const H5F_t UNUSED *f, const H5FA_dblk_page_t *dblk_page,
size_t *size_ptr))
/* Sanity check */
HDassert(f);
HDassert(dblk_page);
HDassert(size_ptr);
/* Set size value */
*size_ptr = dblk_page->size;
END_FUNC(STATIC) /* end H5FA__cache_dblk_page_size() */
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