1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#ifndef H5FPPRIVATE_H__
#define H5FPPRIVATE_H__ 0
#ifdef H5_HAVE_FPHDF5
#include "H5ACpublic.h" /* Metadata Cache */
#include "H5FPpublic.h" /* Flexible Parallel HDF5 */
#include "H5Oprivate.h" /* Object Headers */
#include "H5Rprivate.h" /* References */
/*===----------------------------------------------------------------------===
* Request Types
*===----------------------------------------------------------------------===
*
* The H5FP_REQ_LOCK_END and H5FP_REQ_RELEASE_END are used to lock and
* release a collection of objects at the same time. The last object you
* need to lock is sent with the H5FP_REQ_LOCK_END request type (this can
* also be a null message - where you're just sending a message that has
* H5FP_REQ_LOCK_END as the request type with no data associated with it.
* In that case, the md_size *MUST* be set to 0). The SAP will then try
* to lock all of the objects you've requested to lock at once. If it
* cannot do so, then it will fail and you have to try again at a later
* time.
*
* Releasing locks is done in the exact same way, except that the action
* will always release locks (i.e., not fail) if there is a vaild lock
* for that object.
*/
typedef enum {
/* Metadata Requests */
H5FP_REQ_OPEN, /* Open a file (or eventually an object) */
H5FP_REQ_LOCK, /* Lock an object (in a sequence) */
H5FP_REQ_LOCK_END, /* Last lock request in lock sequence */
H5FP_REQ_RELEASE, /* Unlock an object (in a sequence) */
H5FP_REQ_RELEASE_END, /* Last unlock request in unlock sequence */
H5FP_REQ_WRITE, /* Writing a piece of metadata */
H5FP_REQ_READ, /* Reading a piece of metadata */
H5FP_REQ_FLUSH, /* Flush the metadata out to disk */
H5FP_REQ_CLOSE, /* Close a file (or eventually an object) */
H5FP_REQ_STOP, /* Stop SAP */
/* Allocation Requests */
H5FP_REQ_ALLOC, /* Allocate a region of metadata */
H5FP_REQ_FREE, /* Free a region of metadata */
H5FP_REQ_UPDATE_EOMA_EOSDA /* Update the EOMA and EOSDA information */
} H5FP_req_t;
/*===----------------------------------------------------------------------===
* Lock Types
*===----------------------------------------------------------------------===
*
* A ``read'' lock indicates that the process is busy reading the
* metadata of that object. It's non-exclusive, so any number of
* processes can have any number of locks on a given object. However, you
* cannot have a write and a read lock on an object.
*
* A ``write'' lock indicates that the process is busy writing to the
* metadata of that object. It's exclusive, so only one process can have
* a write lock on an object at any one time. However, that object can
* have any number of write locks on that object.
*
* It's up to the program to release all of the locks it has on a given
* object.
*/
typedef enum {
H5FP_LOCK_READ,
H5FP_LOCK_WRITE
} H5FP_lock_t;
/*===----------------------------------------------------------------------===
* Object Types
*===----------------------------------------------------------------------===
*
* The various types of objects we're able to get a lock on or which we
* want to modify/read.
*/
typedef enum {
H5FP_OBJ_FILE,
H5FP_OBJ_GROUP,
H5FP_OBJ_DATASET,
H5FP_OBJ_DATATYPE,
H5FP_OBJ_ATTRIBUTE,
H5FP_OBJ_MEMORY
} H5FP_obj_t;
/*===----------------------------------------------------------------------===
* MPI Message Tags
*===----------------------------------------------------------------------===
*
* Special tag numbers for requests, replies, and string passing
* messages.
*
* Certain actions (Open, Change, and Close) require a pathname to the
* object. This pathname is sent in a separate message and the SAP will
* search for it after getting the appropriate request.
*/
enum {
H5FP_TAG_REQUEST,
H5FP_TAG_REPLY,
H5FP_TAG_READ,
H5FP_TAG_METADATA,
H5FP_TAG_ALLOC,
H5FP_TAG_DUMP,
H5FP_TAG_FILE_ID
};
/*===----------------------------------------------------------------------===
* Status
*===----------------------------------------------------------------------===
*
* The status returned by the SAP. If the process receives an
* H5FP_STATUS_CATASTROPHIC status, then something *REALLY* bad happened
* on the set-aside process. The state of the program is then
* indeterminant and the only real course of action is for the program to
* abort operation.
*/
typedef enum sap_status {
H5FP_STATUS_OK,
/* For locking */
H5FP_STATUS_LOCK_ACQUIRED,
H5FP_STATUS_LOCK_FAILED,
/* For releasing locks */
H5FP_STATUS_LOCK_RELEASED,
H5FP_STATUS_LOCK_RELEASE_FAILED,
H5FP_STATUS_BAD_LOCK, /* Process doesn't own a lock on the OID */
/* For change requests */
H5FP_STATUS_FILE_CLOSING,
H5FP_STATUS_NO_LOCK,
/* For read requests */
H5FP_STATUS_MDATA_NOT_CACHED,
/* For dumping data to client */
H5FP_STATUS_DUMPING,
H5FP_STATUS_DUMPING_FINISHED,
H5FP_STATUS_DUMPING_FAILED,
/* Out of memory error */
H5FP_STATUS_OOM,
/* Bad file ID */
H5FP_STATUS_BAD_FILE_ID,
/* Can't do memory things */
H5FP_STATUS_CANT_ALLOC,
H5FP_STATUS_CANT_FREE,
/* Reserved for completely disasterous failures which require an abort */
H5FP_STATUS_CATASTROPHIC
} H5FP_status_t;
/*===----------------------------------------------------------------------===
* H5FP_request
*===----------------------------------------------------------------------===
*
* The structure sent to the SAP which holds all of the requested action
*/
typedef struct {
unsigned req_id; /* ID for request set by sending process */
H5FP_req_t req_type; /* Request type */
unsigned proc_rank; /* Rank of sending process */
unsigned file_id; /* SAP's file ID for the specific file */
H5FP_obj_t obj_type; /* Type of the object */
H5FP_lock_t rw_lock; /* Indicates read or write lock */
H5FD_mem_t mem_type; /* Type of memory updated, if req'd */
unsigned md_size; /* Size of the metadata sent in next msg */
unsigned long feature_flags; /* Feature flags for the file driver */
hsize_t meta_block_size; /* Metadata block size */
hsize_t sdata_block_size; /* Small data block size */
hsize_t threshold; /* Alignment threshold */
hsize_t alignment; /* Alignment (really!) */
haddr_t addr; /* Address of the metadata */
haddr_t oid; /* Buffer to store OID of object */
} H5FP_request_t;
extern MPI_Datatype H5FP_request; /* MPI datatype for the H5FP_request obj */
/*===----------------------------------------------------------------------===
* H5FP_reply
*===----------------------------------------------------------------------===
*
* Reply from the SAP on an H5FP_request send
*/
typedef struct {
unsigned req_id; /* Request ID copied from the SAP_request */
unsigned file_id; /* File ID assigned to an open file */
H5FP_status_t status; /* Status of the request */
unsigned md_size; /* Size of the metadata sent in next msg */
} H5FP_reply_t;
extern MPI_Datatype H5FP_reply; /* MPI datatype for the H5FP_reply obj */
/*===----------------------------------------------------------------------===
* H5FP_read
*===----------------------------------------------------------------------===
*
* The reply message from the SAP on an H5FP_request H5FP_REQ_READ send
*/
typedef struct {
unsigned req_id; /* Request ID copied from the SAP_request */
unsigned file_id; /* SAP's file ID for the specific file */
H5FP_status_t status; /* Status of the request */
H5FD_mem_t mem_type; /* Type of memory updated, if req'd */
unsigned md_size; /* Size of the metadata sent in next msg */
MPI_Offset addr; /* Address of the metadata */
} H5FP_read_t;
extern MPI_Datatype H5FP_read; /* MPI datatype for the H5FP_read obj */
/*===----------------------------------------------------------------------===
* H5FP_alloc
*===----------------------------------------------------------------------===
*
* The reply message from the SAP on an H5FP_alloc H5FP_REQ_ALLOC send.
*/
typedef struct {
unsigned req_id; /* Request ID copied from the SAP_request */
unsigned file_id; /* SAP's file ID for the specific file */
H5FP_status_t status; /* Status of the request */
H5FD_mem_t mem_type; /* Type of memory updated, if req'd */
haddr_t addr; /* Address of the metadata */
haddr_t eoa; /* End of address space */
} H5FP_alloc_t;
extern MPI_Datatype H5FP_alloc; /* MPI datatype for the H5FP_alloc obj */
/* SAP specific variables */
extern MPI_Comm H5FP_SAP_COMM; /* Comm we use: Supplied by user */
extern MPI_Comm H5FP_SAP_BARRIER_COMM; /* Comm if you want to do a barrier */
extern unsigned H5FP_sap_rank; /* The rank of the SAP: Supplied by user */
extern unsigned H5FP_capt_rank; /* The rank which tells SAP of opens */
extern unsigned H5FP_capt_barrier_rank;/* Rank of captain in barrier comm */
#ifdef __cplusplus
extern "C" {
#endif /* __cplusplus */
/* Start the SAP */
extern herr_t H5FP_sap_receive_loop(void);
/* Use these functions to communicate with the SAP */
extern herr_t H5FP_request_open(H5FP_obj_t obj_type,
haddr_t maxaddr,
unsigned long feature_flags,
hsize_t meta_block_size,
hsize_t sdata_block_size,
hsize_t threshold,
hsize_t alignment,
unsigned *file_id,
unsigned *req_id);
extern herr_t H5FP_request_lock(unsigned sap_file_id, hobj_ref_t oid,
H5FP_lock_t rw_lock, int last, unsigned *req_id,
H5FP_status_t *status);
extern herr_t H5FP_request_release_lock(unsigned sap_file_id, hobj_ref_t oid,
int last, unsigned *req_id,
H5FP_status_t *status);
extern herr_t H5FP_request_read_metadata(H5FD_t *file, unsigned sap_file_id, hid_t dxpl_id,
H5FD_mem_t mem_type, MPI_Offset addr,
size_t size, uint8_t **buf, int *bytes_read,
unsigned *req_id, H5FP_status_t *status);
extern herr_t H5FP_request_write_metadata(H5FD_t *file, unsigned file_id, hid_t dxpl_id,
H5FD_mem_t mem_type, MPI_Offset addr,
int mdata_size, const char *mdata,
unsigned *req_id, H5FP_status_t *status);
extern herr_t H5FP_request_flush_metadata(H5FD_t *file, unsigned file_id,
hid_t dxpl_id, unsigned *req_id,
H5FP_status_t *status);
extern herr_t H5FP_request_close(H5FD_t *file, unsigned sap_file_id,
unsigned *req_id, H5FP_status_t *status);
extern herr_t H5FP_request_allocate(H5FD_t *file, H5FD_mem_t mem_type,
hsize_t size, haddr_t *addr,
haddr_t *eoa, unsigned *req_id,
H5FP_status_t *status);
extern herr_t H5FP_request_free(H5FD_t *file, H5FD_mem_t mem_type,
haddr_t addr, hsize_t size,
unsigned *req_id, H5FP_status_t *status);
extern herr_t H5FP_request_update_eoma_eosda(H5FD_t *file, unsigned *req_id,
H5FP_status_t *status);
/* NOTE: Don't use these functions outside of the H5FP* modules! */
extern herr_t H5FP_send_metadata(const char *mdata, int len, int to);
extern herr_t H5FP_read_metadata(char **mdata, int len, int from);
#ifdef __cplusplus
}
#endif /* __cplusplus */
#endif /* H5_HAVE_FPHDF5 */
#endif /* H5FPPRIVATE_H__ */
|