1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
1216
1217
1218
1219
1220
1221
1222
1223
1224
1225
1226
1227
1228
1229
1230
1231
1232
1233
1234
1235
1236
1237
1238
1239
1240
1241
1242
1243
1244
1245
1246
1247
1248
1249
1250
1251
1252
1253
1254
1255
1256
1257
1258
1259
1260
1261
1262
1263
1264
1265
1266
1267
1268
1269
1270
1271
1272
1273
1274
1275
1276
1277
1278
1279
1280
1281
1282
1283
1284
1285
1286
1287
1288
1289
1290
1291
1292
1293
1294
1295
1296
1297
1298
1299
1300
1301
1302
1303
1304
1305
1306
1307
1308
1309
1310
1311
1312
1313
1314
1315
1316
1317
1318
1319
1320
1321
1322
1323
1324
1325
1326
1327
1328
1329
1330
1331
1332
1333
1334
1335
1336
1337
1338
1339
1340
1341
1342
1343
1344
1345
1346
1347
1348
1349
1350
1351
1352
1353
1354
1355
1356
1357
1358
1359
1360
1361
1362
1363
1364
1365
1366
1367
1368
1369
1370
1371
1372
1373
1374
1375
1376
1377
1378
1379
1380
1381
1382
1383
1384
1385
1386
1387
1388
1389
1390
1391
1392
1393
1394
1395
1396
1397
1398
1399
1400
1401
1402
1403
1404
1405
1406
1407
1408
1409
1410
1411
1412
1413
1414
1415
1416
1417
1418
1419
1420
1421
1422
1423
1424
1425
1426
1427
1428
1429
1430
1431
1432
1433
1434
1435
1436
1437
1438
1439
1440
1441
1442
1443
1444
1445
1446
1447
1448
1449
1450
1451
1452
1453
1454
1455
1456
1457
1458
1459
1460
1461
1462
1463
1464
1465
1466
1467
1468
1469
1470
1471
1472
1473
1474
1475
1476
1477
1478
1479
1480
1481
1482
1483
1484
1485
1486
1487
1488
1489
1490
1491
1492
1493
1494
1495
1496
1497
1498
1499
1500
1501
1502
1503
1504
1505
1506
1507
1508
1509
1510
1511
1512
1513
1514
1515
1516
1517
1518
1519
1520
1521
1522
1523
1524
1525
1526
1527
1528
1529
1530
1531
1532
1533
1534
1535
1536
1537
1538
1539
1540
1541
1542
1543
1544
1545
1546
1547
1548
1549
1550
1551
1552
1553
1554
1555
1556
1557
1558
1559
1560
1561
1562
1563
1564
1565
1566
1567
1568
1569
1570
1571
1572
1573
1574
1575
1576
1577
1578
1579
1580
1581
1582
1583
1584
1585
1586
1587
1588
1589
1590
1591
1592
1593
1594
1595
1596
1597
1598
1599
1600
1601
1602
1603
1604
1605
1606
1607
1608
1609
1610
1611
1612
1613
1614
1615
1616
1617
1618
1619
1620
1621
1622
1623
1624
1625
1626
1627
1628
1629
1630
1631
1632
1633
1634
1635
1636
1637
1638
1639
1640
1641
1642
1643
1644
1645
1646
1647
1648
1649
1650
1651
1652
1653
1654
1655
1656
1657
1658
1659
1660
1661
1662
1663
1664
1665
1666
1667
1668
1669
1670
1671
1672
1673
1674
1675
1676
1677
1678
1679
1680
1681
1682
1683
1684
1685
1686
1687
1688
1689
1690
1691
1692
1693
1694
1695
1696
1697
1698
1699
1700
1701
1702
1703
1704
1705
1706
1707
1708
1709
1710
1711
1712
1713
1714
1715
1716
1717
1718
1719
1720
1721
1722
1723
1724
1725
1726
1727
1728
1729
1730
1731
1732
1733
1734
1735
1736
1737
1738
1739
1740
1741
1742
1743
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* NOTE! This is NOT thread safe!
*
* NOTE: There will be caveats on call-back functions.
*/
/*
* Purpose:
*
* This file has all of the code that a server (SAP) would run to
* handle requests from clients.
*/
#include "H5private.h" /* Generic Functions */
#include "H5ACprivate.h" /* Metadata Cache */
#include "H5Eprivate.h" /* Error Handling */
#include "H5FDprivate.h" /* File Driver */
#include "H5Oprivate.h" /* Object Headers */
#include "H5Pprivate.h" /* Property List */
#include "H5Rprivate.h" /* References */
#include "H5TBprivate.h" /* Threaded, Balanced, Binary Trees */
#ifdef H5_HAVE_FPHDF5
#include "H5FDfphdf5.h" /* File Driver for FPHDF5 */
#include "H5FPprivate.h" /* Flexible Parallel Functions */
/* Pablo mask */
#define PABLO_MASK H5FPserver_mask
/* Is the interface initialized? */
static int interface_initialize_g = 0;
#define INTERFACE_INIT NULL
/* Internal SAP structures */
/*===----------------------------------------------------------------------===
* H5FP_object_lock
*===----------------------------------------------------------------------===
*
* A lock on a given object. A list of current locks is kept in the
* appropriate H5FP_file_info structure.
*/
typedef struct {
hobj_ref_t oid; /* buffer to store OID of object */
unsigned char *num_locks; /* number of times a rank has a lock */
unsigned num_procs; /* number of processes that have the lock */
H5FP_obj_t obj_type; /* type of object being locked */
H5FP_lock_t rw_lock; /* indicates if it's a read or write lock */
} H5FP_object_lock;
/*===----------------------------------------------------------------------===
* H5FP_mdata_mod
*===----------------------------------------------------------------------===
*
* A given modification (write) of metadata in the file. A list of
* current modifications is kept in the appropriate H5FP_file_info
* structure.
*/
typedef struct {
H5FD_mem_t mem_type; /* type of memory updated */
H5FP_obj_t obj_type; /* type of object modified */
haddr_t addr; /* address of the metadata */
unsigned md_size; /* size of the metadata */
char *metadata; /* encoded metadata about the object */
} H5FP_mdata_mod;
/*===----------------------------------------------------------------------===
* H5FP_file_info
*===----------------------------------------------------------------------===
*
* This has all the information the SAP cares about for a given file: a
* copy of the H5FD_fphdf5_t structure for keeping track of metadata
* allocations in the file, the file ID assigned by the SAP, whether the
* file is in the process of being closed (and, therefore, can't accept
* anymore modifications), a count of the number of modifications not
* written to the file, a list of modifications (writes) made by clients
* to the metadata, and a list of current locks on objects in the file.
*/
typedef struct {
H5FD_fphdf5_t file; /* file driver structure */
unsigned file_id; /* the file id the SAP keeps per file */
int closing; /* we're closing the file - no more changes */
unsigned num_mods; /* number of mdata writes outstanding */
H5TB_TREE *mod_tree; /* a tree of metadata updates done */
H5TB_TREE *locks; /* a tree of locks on objects in the file */
} H5FP_file_info;
/*
* This marks the point at which we want to dump all of the metadata
* to a process so that that process can write them to the file.
*/
#define H5FP_MDATA_CACHE_HIGHWATER_MARK 1024
static H5TB_TREE *file_info_tree;
/* local functions */
static herr_t H5FP_sap_receive(H5FP_request_t *req, int source, int tag, char **buf);
/* local functions to generate unique ids for messages */
static unsigned H5FP_gen_sap_file_id(void);
/* local functions for handling object locks */
static int H5FP_object_lock_cmp(H5FP_object_lock *o1,
H5FP_object_lock *o2,
int cmparg);
static H5FP_object_lock *H5FP_new_object_lock(hobj_ref_t oid,
unsigned rank,
H5FP_obj_t obj_type,
H5FP_lock_t rw_lock);
static herr_t H5FP_free_object_lock(H5FP_object_lock *ol);
static H5FP_object_lock *H5FP_find_object_lock(H5FP_file_info *info,
hobj_ref_t oid);
static herr_t H5FP_remove_object_lock_from_list(H5FP_file_info *info,
H5FP_object_lock *ol);
/* local file information handling functions */
static herr_t H5FP_add_new_file_info_to_list(unsigned file_id,
haddr_t maxaddr,
unsigned long feature_flags,
hsize_t meta_block_size,
hsize_t sdata_block_size,
hsize_t threshold,
hsize_t alignment);
static int H5FP_file_info_cmp(H5FP_file_info *k1,
H5FP_file_info *k2,
int cmparg);
static herr_t H5FP_remove_file_id_from_list(unsigned file_id);
static herr_t H5FP_free_file_info_node(H5FP_file_info *info);
static H5FP_file_info *H5FP_new_file_info_node(unsigned file_id);
static H5FP_file_info *H5FP_find_file_info(unsigned file_id);
/* local file modification structure handling functions */
static H5FP_mdata_mod *H5FP_new_file_mod_node(unsigned rank,
H5FD_mem_t mem_type,
haddr_t addr,
unsigned md_size,
char *metadata);
static herr_t H5FP_free_mod_node(H5FP_mdata_mod *info);
/* local request handling functions */
static herr_t H5FP_sap_handle_open_request(H5FP_request_t *req, unsigned md_size);
static herr_t H5FP_sap_handle_lock_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_release_lock_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_read_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_write_request(H5FP_request_t *req,
char *mdata,
unsigned md_size);
static herr_t H5FP_sap_handle_flush_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_close_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_alloc_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_free_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_get_eoa_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_set_eoa_request(H5FP_request_t *req);
static herr_t H5FP_sap_handle_update_eoma_eosda_request(H5FP_request_t *req);
/*
*===----------------------------------------------------------------------===
* Public Library (non-API) Functions
*===----------------------------------------------------------------------===
*/
/*
* Function: H5FP_sap_receive_loop
* Purpose: Just receive message after message from the other
* processes and process that message. Return when we
* receive an "H5FP_REQ_STOP" message from all processes in
* H5FP_SAP_COMM.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 05. August, 2002
* Modifications:
*/
herr_t
H5FP_sap_receive_loop(void)
{
herr_t ret_value = SUCCEED;
int comm_size;
int stop = 0;
H5FP_request_t req;
FUNC_ENTER_NOAPI(H5FP_sap_receive_loop, FAIL);
/* Get the size of the SAP communicator */
if (MPI_Comm_size(H5FP_SAP_COMM, &comm_size) != MPI_SUCCESS)
HGOTO_ERROR(H5E_INTERNAL, H5E_MPI, FAIL, "MPI_Comm_size failed");
/* Create the file structure tree. */
if ((file_info_tree = H5TB_dmake((H5TB_cmp_t)H5FP_file_info_cmp,
sizeof(H5FP_file_info), FALSE)) == NULL)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTMAKETREE, FAIL, "cannot make TBBT tree");
for (;;) {
char *buf = NULL;
herr_t hrc;
if (H5FP_sap_receive(&req, MPI_ANY_SOURCE, H5FP_TAG_REQUEST, &buf) != SUCCEED)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTRECV, FAIL, "cannot receive messages");
switch (req.req_type) {
case H5FP_REQ_OPEN:
if ((hrc = H5FP_sap_handle_open_request(&req, req.md_size)) != SUCCEED)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTOPENOBJ, FAIL, "cannot open file");
break;
case H5FP_REQ_LOCK:
case H5FP_REQ_LOCK_END:
hrc = H5FP_sap_handle_lock_request(&req);
break;
case H5FP_REQ_RELEASE:
case H5FP_REQ_RELEASE_END:
hrc = H5FP_sap_handle_release_lock_request(&req);
break;
case H5FP_REQ_READ:
hrc = H5FP_sap_handle_read_request(&req);
break;
case H5FP_REQ_WRITE:
hrc = H5FP_sap_handle_write_request(&req, buf, req.md_size);
break;
case H5FP_REQ_FLUSH:
hrc = H5FP_sap_handle_flush_request(&req);
break;
case H5FP_REQ_CLOSE:
hrc = H5FP_sap_handle_close_request(&req);
break;
case H5FP_REQ_ALLOC:
hrc = H5FP_sap_handle_alloc_request(&req);
break;
case H5FP_REQ_FREE:
hrc = H5FP_sap_handle_free_request(&req);
break;
case H5FP_REQ_GET_EOA:
hrc = H5FP_sap_handle_get_eoa_request(&req);
break;
case H5FP_REQ_SET_EOA:
hrc = H5FP_sap_handle_set_eoa_request(&req);
break;
case H5FP_REQ_UPDATE_EOMA_EOSDA:
hrc = H5FP_sap_handle_update_eoma_eosda_request(&req);
break;
case H5FP_REQ_STOP:
hrc = SUCCEED;
if (++stop == comm_size - 1)
goto done;
break;
default:
HGOTO_ERROR(H5E_FPHDF5, H5E_ARGS, FAIL, "invalid request type");
}
/*
* If the above calls didn't succeed, free the buffer
*/
if (hrc != SUCCEED) {
HDfree(buf);
}
}
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_receive
* Purpose: Receive a message from SOURCE with the given TAG. The REQ
* object passed in as a pointer is filled by the MPI_Recv
* function.
* Return: Success: Pointer to string passed in, if one was sent.
* As well as the SAP_request object.
* Failure: FAIL
* Programmer: Bill Wendling, 17. September, 2002
* Modifications:
*/
static herr_t
H5FP_sap_receive(H5FP_request_t *req, int source, int tag, char **buf)
{
MPI_Status status;
herr_t ret_value = SUCCEED;
int mrc;
FUNC_ENTER_NOINIT(H5FP_sap_receive);
HDmemset(&status, 0, sizeof(status));
if ((mrc = MPI_Recv(req, 1, H5FP_request, source, tag,
H5FP_SAP_COMM, &status)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Recv failed", mrc);
if (buf && req->md_size)
if (H5FP_read_metadata(buf, (int)req->md_size, (int)req->proc_rank) == FAIL)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTRECV, FAIL, "can't read metadata from process");
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_object_lock_cmp
* Purpose: Comparison function for the TBBT.
* Return: <0, 0, or >0
* Programmer: Bill Wendling, 09. September 2002
* Modifications:
*/
static int
H5FP_object_lock_cmp(H5FP_object_lock *o1,
H5FP_object_lock *o2,
int UNUSED cmparg)
{
FUNC_ENTER_NOINIT(H5FP_object_lock_cmp);
assert(o1);
assert(o2);
FUNC_LEAVE_NOAPI(o2->oid - o1->oid);
}
/*
* Function: H5FP_new_object_lock
* Purpose: Create a new object lock. The locks are keyed off of the
* OID when they're inserted into the TBBT. There's a
* reference count so the same process can request the lock
* multiple times, if need be. The rank of the requesting
* process is kept around so that we can determine who
* wanted it in the first place. RW_LOCK tells us what kind
* of lock it is -- READ or WRITE.
* Return: Success: Pointer to SAP_OBJ_LOCK structure.
* Failure: NULL
* Programmer: Bill Wendling, 09. September 2002
* Modifications:
*/
static H5FP_object_lock *
H5FP_new_object_lock(hobj_ref_t oid, unsigned rank, H5FP_obj_t obj_type,
H5FP_lock_t rw_lock)
{
int comm_size;
H5FP_object_lock *ret_value = NULL;
FUNC_ENTER_NOINIT(H5FP_new_object_lock);
if (MPI_Comm_size(H5FP_SAP_COMM, &comm_size) != MPI_SUCCESS)
HGOTO_ERROR(H5E_INTERNAL, H5E_MPI, NULL, "MPI_Comm_size failed");
if ((ret_value = (H5FP_object_lock *)H5MM_malloc(sizeof(H5FP_object_lock))) == NULL)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "out of memory");
if ((ret_value->num_locks = (unsigned char *)HDcalloc(comm_size, 1)) == NULL) {
HDfree(ret_value);
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "out of memory");
}
ret_value->oid = oid;
ret_value->num_locks[rank] = TRUE;
ret_value->obj_type = obj_type;
ret_value->num_procs = 1;
ret_value->rw_lock = rw_lock;
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_free_object_lock
* Purpose: Free up the space allocated for the object lock.
* Return: SUCCEED (never fails)
* Programmer: Bill Wendling, 09. September 2002
* Modifications:
*/
static herr_t
H5FP_free_object_lock(H5FP_object_lock *ol)
{
FUNC_ENTER_NOINIT(H5FP_free_object_lock);
if (ol) {
HDfree(ol->num_locks);
HDfree(ol);
}
FUNC_LEAVE_NOAPI(SUCCEED);
}
/*
* Function: H5FP_find_object_lock
* Purpose: Find the object lock for the given OID if there is one.
* Return: Success: Pointer to the object
* Failure: NULL
* Programmer: Bill Wendling, 09. September 2002
* Modifications:
*/
static H5FP_object_lock *
H5FP_find_object_lock(H5FP_file_info *info, hobj_ref_t oid)
{
H5FP_object_lock *ret_value = NULL;
FUNC_ENTER_NOINIT(H5FP_find_object_lock);
assert(info);
assert(oid);
if (info->locks && info->locks->root) {
H5TB_NODE *node;
H5FP_object_lock ol;
ol.oid = oid; /* This is the key field for the TBBT */
if ((node = H5TB_dfind(info->locks, (void *)&ol, NULL)) == NULL)
HGOTO_ERROR(H5E_FPHDF5, H5E_NOTFOUND, NULL, "lock not found");
ret_value = (H5FP_object_lock *)node->data;
}
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_remove_object_lock_from_list
* Purpose: Remove the object lock from the file structure's lock
* list.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 09. September 2002
* Modifications:
*/
static herr_t
H5FP_remove_object_lock_from_list(H5FP_file_info *info,
H5FP_object_lock *ol)
{
H5TB_NODE *node;
herr_t ret_value = FAIL;
FUNC_ENTER_NOINIT(H5FP_remove_object_lock_from_list);
if ((node = H5TB_dfind(info->locks, (void *)ol, NULL)) != NULL) {
H5FP_free_object_lock(H5TB_rem(&info->locks->root, node, NULL));
ret_value = SUCCEED;
}
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_file_mod_cmp
* Purpose: Comparison function for the TBBT.
* Return: <0, 0, or >0
* Programmer: Bill Wendling, 27. August, 2002
* Modifications:
*/
static int
H5FP_file_mod_cmp(H5FP_mdata_mod *k1,
H5FP_mdata_mod *k2,
int UNUSED cmparg)
{
FUNC_ENTER_NOINIT(H5FP_file_mod_cmp);
assert(k1);
assert(k2);
FUNC_LEAVE_NOAPI(k2->addr - k1->addr);
}
/*
* Function: H5FP_free_mod_node
* Purpose: Helper function to free up an SAP_FILE_MOD node and all
* of the malloced space it has.
* Return: SUCCEED (doesn't fail)
* Programmer: Bill Wendling, 31. July, 2002
* Modifications:
*/
static herr_t
H5FP_free_mod_node(H5FP_mdata_mod *info)
{
FUNC_ENTER_NOINIT(H5FP_free_mod_node);
if (info) {
HDfree(info->metadata);
HDfree(info);
}
FUNC_LEAVE_NOAPI(SUCCEED);
}
/*
* Function: H5FP_new_file_mod_node
* Purpose: Create a new sap_file_mod node and initialize it. This
* object now has responsibility for freeing the metadata
* information.
* Return: Success: Pointer to new sap_file_mod structure.
* Failure: NULL
* Programmer: Bill Wendling, 02. August, 2002
* Modifications:
*/
static H5FP_mdata_mod *
H5FP_new_file_mod_node(unsigned UNUSED rank, H5FD_mem_t mem_type,
haddr_t addr, unsigned md_size, char *metadata)
{
H5FP_mdata_mod *ret_value = NULL;
FUNC_ENTER_NOINIT(H5FP_new_file_mod_node);
if ((ret_value = (H5FP_mdata_mod *)H5MM_malloc(sizeof(H5FP_mdata_mod))) == NULL)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "out of memory");
ret_value->mem_type = mem_type;
ret_value->addr = addr;
ret_value->md_size = md_size;
ret_value->metadata = metadata;
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_add_file_mod_to_list
* Purpose: Add a metadata write to a file ID. If the metadata is
* already in the cache, then we just replace it with the
* updated bits. (Only the metadata info and size should
* change in this case.)
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 02. August, 2002
* Modifications:
*/
static herr_t
H5FP_add_file_mod_to_list(H5FP_file_info *info, H5FD_mem_t mem_type,
haddr_t addr, unsigned rank, unsigned md_size,
char *metadata)
{
H5FP_mdata_mod *fm, mod;
H5TB_NODE *node;
herr_t ret_value = FAIL;
FUNC_ENTER_NOINIT(H5FP_add_file_mod_to_list);
/* check args */
assert(info);
mod.addr = addr; /* This is the key field for the TBBT */
if ((node = H5TB_dfind(info->mod_tree, (void *)&mod, NULL)) != NULL) {
/*
* The metadata is in the cache already. All we have to do is
* replace what's there. The addr and type should be the same.
* The only things to change is the metadata and its size.
*/
fm = (H5FP_mdata_mod *)node->data;
HDfree(fm->metadata);
fm->metadata = metadata;
fm->md_size = md_size;
HGOTO_DONE(SUCCEED);
}
if ((fm = H5FP_new_file_mod_node(rank, mem_type, addr, md_size, metadata)) != NULL) {
if (!H5TB_dins(info->mod_tree, (void *)fm, NULL))
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTINSERT, FAIL,
"can't insert modification into tree");
++info->num_mods;
HGOTO_DONE(SUCCEED);
}
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_free_file_info_node
* Purpose: Helper function to free up an SAP_FILE_STRUCT node and all
* of the malloced space it has.
* Return: SUCCEED (never fails)
* Programmer: Bill Wendling, 31. July, 2002
* Modifications:
*/
static herr_t
H5FP_free_file_info_node(H5FP_file_info *info)
{
FUNC_ENTER_NOINIT(H5FP_free_file_info_node);
if (info) {
H5TB_dfree(info->mod_tree, (void (*)(void*))H5FP_free_mod_node, NULL);
H5TB_dfree(info->locks, (void (*)(void*))H5FP_free_object_lock, NULL);
H5FD_free_freelist(&info->file.pub);
HDfree(info);
}
FUNC_LEAVE_NOAPI(SUCCEED);
}
/*
* Function: H5FP_file_info_cmp
* Purpose: Compare two sap_file_info structs for the TBBT.
* Return: <0, 0, >0
* Programmer: Bill Wendling, 27. August, 2002
* Modifications:
*/
static int
H5FP_file_info_cmp(H5FP_file_info *k1, H5FP_file_info *k2, int UNUSED cmparg)
{
FUNC_ENTER_NOINIT(H5FP_file_info_cmp);
assert(k1);
assert(k2);
FUNC_LEAVE_NOAPI(k1->file_id - k2->file_id);
}
/*
* Function: H5FP_new_file_info_node
* Purpose: Create and initialize an sap_file_info node.
* Return: Success: Pointer to new node
* Failure: NULL
* Programmer: Bill Wendling, 02. August, 2002
* Modifications:
*/
static H5FP_file_info *
H5FP_new_file_info_node(unsigned file_id)
{
H5FP_file_info *ret_value;
FUNC_ENTER_NOINIT(H5FP_new_file_info_node);
if ((ret_value = (H5FP_file_info *)H5MM_malloc(sizeof(H5FP_file_info))) == NULL)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "out of memory");
ret_value->file_id = file_id;
ret_value->closing = FALSE;
ret_value->num_mods = 0;
if ((ret_value->mod_tree = H5TB_dmake((H5TB_cmp_t)H5FP_file_mod_cmp,
sizeof(H5FP_mdata_mod), FALSE)) == NULL) {
HDfree(ret_value);
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTMAKETREE, NULL, "cannot make TBBT tree");
}
if ((ret_value->locks = H5TB_dmake((H5TB_cmp_t)H5FP_object_lock_cmp,
sizeof(H5FP_object_lock), FALSE)) == NULL) {
H5TB_dfree(ret_value->mod_tree, (void (*)(void*))H5FP_free_mod_node, NULL);
HDfree(ret_value);
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTMAKETREE, NULL, "cannot make TBBT tree");
}
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_find_file_info
* Purpose: Find the file structure for the requested file_id.
* Return: Success: Pointer to the file structure
* Failure: NULL
* Programmer: Bill Wendling, 31. July, 2002
* Modifications:
*/
static H5FP_file_info *
H5FP_find_file_info(unsigned file_id)
{
H5TB_NODE *node = NULL;
H5FP_file_info *ret_value = NULL;
FUNC_ENTER_NOINIT(H5FP_find_file_info);
if (file_info_tree && file_info_tree->root) {
H5FP_file_info s;
s.file_id = file_id; /* This is the key field for the TBBT */
if ((node = H5TB_dfind(file_info_tree, (void *)&s, NULL)) != NULL)
ret_value = (H5FP_file_info *)node->data;
}
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_add_new_file_info_to_list
* Purpose: Add a FILE_ID to the list of file IDS.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 02. August, 2002
* Modifications:
*/
static herr_t
H5FP_add_new_file_info_to_list(unsigned file_id, haddr_t maxaddr,
unsigned long feature_flags,
hsize_t meta_block_size,
hsize_t sdata_block_size,
hsize_t threshold,
hsize_t alignment)
{
H5FP_file_info *info;
herr_t ret_value = FAIL;
FUNC_ENTER_NOINIT(H5FP_add_new_file_info_to_list);
if ((info = H5FP_new_file_info_node(file_id)) != NULL) {
int mrc;
if (!H5TB_dins(file_info_tree, (void *)info, NULL)) {
H5FP_free_file_info_node(info);
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTINSERT, FAIL,
"can't insert file structure into tree");
}
/*
* Initialize some of the information needed for metadata
* allocation requests
*/
HDmemset(&info->file, 0, sizeof(info->file));
info->file.pub.driver_id = H5FD_FPHDF5;
info->file.pub.cls = &H5FD_fphdf5_g;
info->file.pub.maxaddr = maxaddr;
info->file.pub.accum_loc = HADDR_UNDEF;
info->file.pub.feature_flags = feature_flags;
info->file.pub.def_meta_block_size = meta_block_size;
info->file.pub.def_sdata_block_size = sdata_block_size;
info->file.pub.threshold = threshold;
info->file.pub.alignment = alignment;
if ((mrc = MPI_Comm_rank(H5FP_SAP_COMM, &info->file.mpi_rank)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Comm_rank failed", mrc);
if ((mrc = MPI_Comm_size(H5FP_SAP_COMM, &info->file.mpi_size)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Comm_rank failed", mrc);
ret_value = SUCCEED;
}
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_remove_file_id_from_list
* Purpose: Remove an FILE_ID from the list of file IDS.
*
* NOTE: This should only be called after all modifications to
* the file descriptor have been synced to all processes and the
* file has been closed by all processes.
*
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 31. July, 2002
* Modifications:
*/
static herr_t
H5FP_remove_file_id_from_list(unsigned file_id)
{
H5FP_file_info s;
H5TB_NODE *node;
herr_t ret_value = FAIL;
FUNC_ENTER_NOINIT(H5FP_remove_file_id_from_list);
s.file_id = file_id; /* This is the key field for the TBBT */
if ((node = H5TB_dfind(file_info_tree, (void *)&s, NULL)) != NULL) {
H5FP_free_file_info_node(H5TB_rem(&file_info_tree->root, node, NULL));
ret_value = SUCCEED;
}
FUNC_LEAVE_NOAPI(ret_value);
}
/*
*===----------------------------------------------------------------------===
* Functions to reply to requests
*===----------------------------------------------------------------------===
*/
/*
* Function: H5FP_send_reply
* Purpose: Send an H5FP_reply message to process TO.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 31. July, 2002
* Modifications:
*/
static herr_t
H5FP_send_reply(unsigned to, unsigned req_id, unsigned file_id, H5FP_status_t status)
{
H5FP_reply_t reply;
herr_t ret_value = SUCCEED;
int mrc;
FUNC_ENTER_NOINIT(H5FP_send_reply);
reply.req_id = req_id;
reply.file_id = file_id;
reply.status = status;
if ((mrc = MPI_Send(&reply, 1, H5FP_reply, (int)to, H5FP_TAG_REPLY,
H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Send failed", mrc);
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_dump
* Purpose: Dump all metadata writes to a process so that that
* process will write them to the file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 31. July, 2002
* Modifications:
*/
static herr_t
H5FP_dump(H5FP_file_info *info, unsigned to, unsigned req_id, unsigned file_id)
{
H5FP_read_t r;
H5TB_NODE *node;
herr_t ret_value = SUCCEED;
int mrc;
FUNC_ENTER_NOINIT(H5FP_dump);
/* check args */
assert(info);
if (!info->mod_tree)
/* Nothing to write to the file */
HGOTO_DONE(SUCCEED);
r.req_id = req_id;
r.file_id = file_id;
r.status = H5FP_STATUS_DUMPING;
node = H5TB_first(info->mod_tree->root);
while (node) {
H5FP_mdata_mod *m = (H5FP_mdata_mod *)node->data;
r.mem_type = m->mem_type;
r.addr = m->addr;
r.md_size = m->md_size;
if ((mrc = MPI_Send(&r, 1, H5FP_read, (int)to, H5FP_TAG_DUMP,
H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Send failed", mrc);
if (H5FP_send_metadata(m->metadata, (int)m->md_size, (int)to) != SUCCEED)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"can't dump metadata to client");
node = H5TB_next(node);
}
/* Tell the receiving process that we're finished... */
r.mem_type = 0;
r.addr = 0;
r.md_size = 0;
r.status = H5FP_STATUS_DUMPING_FINISHED;
if ((mrc = MPI_Send(&r, 1, H5FP_read, (int)to, H5FP_TAG_DUMP,
H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Send failed", mrc);
/* Free up the modification tree */
H5TB_dfree(info->mod_tree, (void (*)(void*))H5FP_free_mod_node, NULL);
if ((info->mod_tree = H5TB_dmake((H5TB_cmp_t)H5FP_file_mod_cmp,
sizeof(H5FP_mdata_mod), FALSE)) == NULL)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTMAKETREE, FAIL, "cannot make TBBT tree");
info->num_mods = 0;
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
*===----------------------------------------------------------------------===
* Functions to handle SAP requests
*===----------------------------------------------------------------------===
*/
/*
* Function: H5FP_gen_request_id
* Purpose: Generate a unique request ID to send along with a
* message.
* Return: Integer >= 0 - Doesn't fail.
* Programmer: Bill Wendling, 30. July, 2002
* Modifications:
*/
static unsigned
H5FP_gen_sap_file_id()
{
static unsigned i = 0;
FUNC_ENTER_NOINIT(H5FP_gen_sap_file_id);
FUNC_LEAVE_NOAPI(i++);
}
/*
* Function: H5FP_sap_handle_open_request
* Purpose: Handle a request to open a file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 06. August, 2002
* Modifications:
*/
static herr_t
H5FP_sap_handle_open_request(H5FP_request_t *req, unsigned UNUSED md_size)
{
herr_t ret_value = SUCCEED;
int mrc;
FUNC_ENTER_NOINIT(H5FP_sap_handle_open_request);
if (req->obj_type == H5FP_OBJ_FILE) {
unsigned new_file_id = H5FP_gen_sap_file_id();
/* N.B. At this point, req->addr is equiv. to maxaddr in H5FD_open() */
if (H5FP_add_new_file_info_to_list(new_file_id, req->addr, req->feature_flags,
req->meta_block_size, req->sdata_block_size,
req->threshold, req->alignment) != SUCCEED)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTINSERT, FAIL,
"can't insert new file structure to list");
/* file ID gets broadcast via the captain process */
if ((mrc = MPI_Send(&new_file_id, 1, MPI_UNSIGNED, (int)req->proc_rank,
H5FP_TAG_FILE_ID, H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Send failed", mrc);
}
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_lock_request
* Purpose: Handle a request to lock an object. There are two
* different kinds of locks. There are READ and WRITE locks.
* The READ locks are sharable, that is if all processes want
* to READ the object, they can. They just tell the SAP that
* they're doing so and the SAP gives them a "token" to do
* that. WRITE locks, on the other hand, are exclusive. You
* can't have any outstanding READ or WRITE locks on an
* object before you get a WRITE lock on it.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 06. August, 2002
* Modifications:
*/
static herr_t
H5FP_sap_handle_lock_request(H5FP_request_t *req)
{
struct lock_group {
hobj_ref_t oid;
unsigned file_id;
unsigned locked;
H5FP_lock_t rw_lock;
H5FP_file_info *info;
H5FP_object_lock *lock;
} *oids;
unsigned list_size = 2; /* the size of the "oids" list */
H5FP_status_t exit_state = H5FP_STATUS_LOCK_ACQUIRED;
herr_t ret_value = SUCCEED;
unsigned i, j;
FUNC_ENTER_NOINIT(H5FP_sap_handle_lock_request);
if ((oids = (struct lock_group *)H5MM_malloc(list_size *
sizeof(struct lock_group))) == NULL) {
exit_state = H5FP_STATUS_OOM;
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "out of memory");
}
/*
* Gather together all of the OIDs the process is requesting to lock
* at one time.
*/
for (i = 0;; ++i) {
if (req->oid) {
if (i == list_size) {
list_size <<= 1; /* equiv to list_size *= 2; */
oids = HDrealloc(oids, list_size * sizeof(struct lock_group));
if (!oids) {
exit_state = H5FP_STATUS_OOM;
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "out of memory");
}
}
oids[i].oid = req->oid;
oids[i].file_id = req->file_id;
oids[i].rw_lock = req->rw_lock;
oids[i].locked = FALSE;
}
if (req->req_type == H5FP_REQ_LOCK_END)
/* this was the last lock request */
break;
if (H5FP_sap_receive(req, (int)req->proc_rank,
H5FP_TAG_REQUEST, NULL) != SUCCEED) {
exit_state = H5FP_STATUS_LOCK_FAILED;
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTRECV, FAIL, "cannot receive messages");
}
}
/*
* Check to see if we can acquire all of the locks requested. If
* not, the it's an error and we need to return.
*/
for (j = 0; j <= i; ++j) {
if ((oids[j].info = H5FP_find_file_info(oids[j].file_id)) == NULL) {
exit_state = H5FP_STATUS_BAD_FILE_ID;
HGOTO_DONE(FAIL);
}
if (oids[j].info->closing) {
/* we're closing the file - don't accept anymore locks */
exit_state = H5FP_STATUS_FILE_CLOSING;
HGOTO_DONE(FAIL);
}
oids[j].lock = H5FP_find_object_lock(oids[j].info, oids[j].oid);
/*
* Don't panic!
*
* This horrid little if-then statement is just the logical
* inverse of the if-then statement in the next for-loop.
*/
if (oids[j].lock &&
!((oids[j].rw_lock == H5FP_LOCK_READ &&
oids[j].lock->rw_lock == H5FP_LOCK_READ) ||
(oids[j].rw_lock == H5FP_LOCK_WRITE &&
oids[j].lock->rw_lock == H5FP_LOCK_WRITE &&
oids[j].lock->num_locks[req->proc_rank]))) {
/* FAILURE */
exit_state = H5FP_STATUS_LOCK_FAILED;
HGOTO_DONE(FAIL);
}
}
/*
* Actually acquire the locks. This shouldn't fail because of the
* previous checks. The only thing which can likely occur is an
* out-of-memory error.
*/
for (j = 0; j <= i; ++j) {
if (oids[j].lock) {
/*
* Don't panic!
*
* This horrid little if-then statement is just checking so
* that if you want a READ lock and the current lock is a
* READ lock, then we bump up the reference count on it. If
* you want a WRITE lock and the current lock is a WRITE lock
* and furthermore the current process has that lock, we will
* also bump up the reference count.
*
* Otherwise, it's a failure.
*/
if ((oids[j].rw_lock == H5FP_LOCK_READ &&
oids[j].lock->rw_lock == H5FP_LOCK_READ) ||
(oids[j].rw_lock == H5FP_LOCK_WRITE &&
oids[j].lock->rw_lock == H5FP_LOCK_WRITE &&
oids[j].lock->num_locks[req->proc_rank])) {
/*
* The requesting process may already have this lock. Might
* be a request from some call-back function of some sort.
* Increase the reference count if this process hasn't
* gotten a lock on this before and then increment that
* process's num_locks reference count.
*/
if (!oids[j].lock->num_locks[req->proc_rank])
++oids[j].lock->num_procs;
++oids[j].lock->num_locks[req->proc_rank];
oids[j].locked = TRUE;
} else {
/* FIXME: reply saying object locked? */
exit_state = H5FP_STATUS_LOCK_FAILED;
ret_value = FAIL;
goto rollback;
}
} else {
H5FP_object_lock *lock = H5FP_new_object_lock(oids[j].oid, req->proc_rank,
req->obj_type, req->rw_lock);
if (lock) {
if (!H5TB_dins(oids[j].info->locks, (void *)lock, NULL)) {
H5FP_free_object_lock(lock);
exit_state = H5FP_STATUS_LOCK_FAILED;
HDONE_ERROR(H5E_FPHDF5, H5E_CANTINSERT, FAIL, "can't insert lock into tree");
goto rollback;
}
oids[j].locked = TRUE;
} else {
/* out of memory...ulp! */
exit_state = H5FP_STATUS_OOM;
HDONE_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "out of memory");
goto rollback;
}
}
}
goto done;
/* Error handling code */
rollback:
/*
* More than likely, out of memory during the actual locking phase.
* Try to release any locks which may have been obtained. If it's not
* possible to release those locks, we're in big trouble. The file is
* now in an inconsistent state, as far as the SAP is concerned. The
* only options left to the program are either to abort or completely
* close the file and reopen which could cause corruption.
*/
for (j = 0; j <= i; ++j) {
if (oids[j].locked) {
if (oids[j].lock) {
if (oids[j].lock->num_locks[req->proc_rank]) {
if (--oids[j].lock->num_locks[req->proc_rank] == 0)
if (--oids[j].lock->num_procs == 0)
H5FP_remove_object_lock_from_list(oids[j].info, oids[j].lock);
} else {
/* CATASTROPHIC FAILURE!!! */
/* LOCK WAS NOT CLEARED */
exit_state = H5FP_STATUS_CATASTROPHIC;
}
} else {
/* CATASTROPHIC FAILURE!!! */
/* LOCK WAS NOT CLEARED */
exit_state = H5FP_STATUS_CATASTROPHIC;
}
}
}
done:
if (ret_value != SUCCEED) {
/* Can't lock the whole group at one time for some reason */
HDfprintf(stderr, "%s: locking failure (%d)!!\n", FUNC, ret_value);
assert(0);
}
HDfree(oids);
H5FP_send_reply(req->proc_rank, req->req_id, req->file_id, exit_state);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_release_lock_request
* Purpose: Handle a request to release the lock on an object.
* Return: Nothing
* Programmer: Bill Wendling, 06. August, 2002
* Modifications:
*/
static herr_t
H5FP_sap_handle_release_lock_request(H5FP_request_t *req)
{
struct release_group {
hobj_ref_t oid;
unsigned file_id;
H5FP_file_info *info;
H5FP_object_lock *lock;
} *oids;
unsigned list_size = 2; /* the size of the "oids" list */
H5FP_status_t exit_state = H5FP_STATUS_LOCK_RELEASED;
herr_t ret_value = SUCCEED;
unsigned i, j;
FUNC_ENTER_NOINIT(H5FP_sap_handle_release_lock_request);
if ((oids = (struct release_group *)H5MM_malloc(list_size *
sizeof(struct release_group))) == NULL) {
exit_state = H5FP_STATUS_OOM;
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "out of memory");
}
/*
* Gather together all of the OIDs the process is requesting to
* release locks at one time.
*/
for (i = 0;; ++i) {
if (req->oid) {
if (i == list_size) {
list_size <<= 1; /* equiv to list_size *= 2; */
oids = HDrealloc(oids, list_size * sizeof(struct release_group));
if (!oids) {
exit_state = H5FP_STATUS_OOM;
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "out of memory");
}
}
oids[i].oid = req->oid;
oids[i].file_id = req->file_id;
}
if (req->req_type == H5FP_REQ_RELEASE_END)
/* this was the last lock request */
break;
if (H5FP_sap_receive(req, (int)req->proc_rank, H5FP_TAG_REQUEST, NULL) != SUCCEED) {
exit_state = H5FP_STATUS_LOCK_RELEASE_FAILED;
HGOTO_DONE(FAIL);
}
}
/*
* Check here to see if the locks exist and we have the locks. This
* will help keep us from being in a catastrophic state.
*/
for (j = 0; j <= i; ++j) {
if ((oids[j].info = H5FP_find_file_info(oids[j].file_id)) == NULL) {
exit_state = H5FP_STATUS_BAD_FILE_ID;
HGOTO_DONE(FAIL);
}
oids[j].lock = H5FP_find_object_lock(oids[j].info, oids[j].oid);
if (!oids[j].lock || !oids[j].lock->num_locks[req->proc_rank]) {
exit_state = H5FP_STATUS_BAD_LOCK;
HGOTO_DONE(FAIL);
}
}
/*
* Release a lock. There may be multiple locks to release if they
* were locked in a group, so loop finding all of the locks and
* release them.
*/
for (j = 0; j <= i; ++j) {
if (oids[j].lock) {
if (oids[j].lock->num_locks[req->proc_rank]) {
if (--oids[j].lock->num_locks[req->proc_rank] == 0)
if (--oids[j].lock->num_procs == 0)
H5FP_remove_object_lock_from_list(oids[j].info, oids[j].lock);
} else {
/* AAAIIIIEEE!!! */
exit_state = H5FP_STATUS_CATASTROPHIC;
HGOTO_DONE(FAIL);
}
} else {
/* AAAIIIIEEE!!! */
exit_state = H5FP_STATUS_CATASTROPHIC;
HGOTO_DONE(FAIL);
}
}
done:
HDfree(oids);
H5FP_send_reply(req->proc_rank, req->req_id, req->file_id, exit_state);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_read_request
* Purpose: Handle a read request from a client. The bit of metadata
* that the client wants may or may not be in here. It's not
* an error if it isn't here. When that's the case, the
* client just goes and reads it from the file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 06. August, 2002
* Modifications:
*/
static herr_t
H5FP_sap_handle_read_request(H5FP_request_t *req)
{
H5FP_file_info *info;
H5FP_read_t r;
herr_t ret_value = SUCCEED;
char *metadata = NULL;
int mrc;
FUNC_ENTER_NOINIT(H5FP_sap_handle_read_request);
r.req_id = req->req_id;
r.file_id = req->file_id;
r.md_size = 0;
r.addr = 0;
r.status = H5FP_STATUS_MDATA_NOT_CACHED;
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
H5FP_mdata_mod mod; /* Used to find the correct modification */
H5TB_NODE *node;
if (info->num_mods >= H5FP_MDATA_CACHE_HIGHWATER_MARK) {
if (H5FP_dump(info, req->proc_rank, req->req_id, req->file_id) == FAIL)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"can't dump metadata to client");
/*
* We aren't going to find the information we need since it
* was just dumped.
*/
HGOTO_DONE(SUCCEED);
}
mod.addr = req->addr; /* This is the key field for the TBBT */
if ((node = H5TB_dless(info->mod_tree, (void *)&mod, NULL)) != NULL) {
H5FP_mdata_mod *fm = (H5FP_mdata_mod *)node->data;
if (H5F_addr_eq(req->addr, fm->addr)) {
r.md_size = fm->md_size;
r.addr = fm->addr;
r.status = H5FP_STATUS_OK;
metadata = fm->metadata; /* Sent out in a separate message */
} else if (H5F_addr_gt(req->addr, fm->addr)
&& H5F_addr_lt(req->addr, fm->addr + fm->md_size)) {
r.md_size = fm->md_size - (req->addr - fm->addr);
r.addr = req->addr;
r.status = H5FP_STATUS_OK;
metadata = fm->metadata + (req->addr - fm->addr); /* Sent out separately */
} else {
HDfprintf(stderr, "Panic!!!!\n");
assert(0);
}
} else {
HDfprintf(stderr, "%s: Couldn't find metadata at req->addr == %a\n", FUNC, req->addr);
assert(0);
}
}
if ((mrc = MPI_Send(&r, 1, H5FP_read, (int)req->proc_rank,
H5FP_TAG_READ, H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_GOTO_ERROR(FAIL, "MPI_Send failed", mrc);
if (r.md_size)
if (H5FP_send_metadata(metadata, (int)r.md_size, (int)req->proc_rank) != SUCCEED)
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"can't send metadata to client");
done:
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_write_request
* Purpose: Handle a request to write a piece of metadata in the
* file.
*
* N.B: We assume that the client has the lock on the
* requesting object before getting here.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 06. August, 2002
* Modifications:
*/
static herr_t
H5FP_sap_handle_write_request(H5FP_request_t *req, char *mdata, unsigned md_size)
{
H5FP_file_info *info;
H5FP_status_t exit_state = H5FP_STATUS_OK;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOINIT(H5FP_sap_handle_write_request);
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
if (info->num_mods >= H5FP_MDATA_CACHE_HIGHWATER_MARK) {
/*
* If there are any modifications not written out yet, dump
* them to this process
*/
if (H5FP_send_reply(req->proc_rank, req->req_id, req->file_id,
H5FP_STATUS_DUMPING) == FAIL) {
exit_state = H5FP_STATUS_DUMPING_FAILED;
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"can't send message to client");
}
if (H5FP_dump(info, req->proc_rank, req->req_id, req->file_id) == FAIL) {
exit_state = H5FP_STATUS_DUMPING_FAILED;
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"metadata dump failed");
}
}
if (info->closing) {
/* we're closing the file - don't accept anymore changes */
exit_state = H5FP_STATUS_FILE_CLOSING;
HGOTO_DONE(FAIL);
}
if (H5FP_add_file_mod_to_list(info, req->mem_type, (haddr_t)req->addr,
req->proc_rank, md_size, mdata) != SUCCEED) {
exit_state = H5FP_STATUS_OOM;
HGOTO_DONE(FAIL);
}
} else {
/* error: there isn't a file opened to change */
exit_state = H5FP_STATUS_BAD_FILE_ID;
HGOTO_DONE(FAIL);
}
done:
H5FP_send_reply(req->proc_rank, req->req_id, req->file_id, exit_state);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_flush_request
* Purpose: Handle a request to flush the metadata to a file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling
* 12. February 2003
* Modifications:
*/
static herr_t
H5FP_sap_handle_flush_request(H5FP_request_t *req)
{
H5FP_file_info *info;
H5FP_status_t exit_state = H5FP_STATUS_OK;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOINIT(H5FP_sap_handle_flush_request);
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
if (info->num_mods) {
/*
* If there are any modifications not written out yet, dump
* them to this process
*/
if (H5FP_send_reply(req->proc_rank, req->req_id, req->file_id,
H5FP_STATUS_DUMPING) == FAIL) {
exit_state = H5FP_STATUS_DUMPING_FAILED;
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"can't send message to client");
}
if (H5FP_dump(info, req->proc_rank, req->req_id, req->file_id) == FAIL) {
exit_state = H5FP_STATUS_DUMPING_FAILED;
HGOTO_ERROR(H5E_FPHDF5, H5E_CANTSENDMDATA, FAIL,
"can't dump metadata to client");
}
}
} else {
HGOTO_ERROR(H5E_FPHDF5, H5E_NOTFOUND, FAIL,
"can't find information for file");
}
done:
H5FP_send_reply(req->proc_rank, req->req_id, req->file_id, exit_state);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_close_request
* Purpose: Handle a request to close a file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 06. August, 2002
* Modifications:
*/
static herr_t
H5FP_sap_handle_close_request(H5FP_request_t *req)
{
H5FP_file_info *info;
H5FP_status_t exit_state = H5FP_STATUS_OK;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOINIT(H5FP_sap_handle_close_request);
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
int comm_size;
/* Get the size of the SAP communicator */
if (MPI_Comm_size(H5FP_SAP_COMM, &comm_size) != MPI_SUCCESS)
HGOTO_ERROR(H5E_INTERNAL, H5E_MPI, FAIL, "MPI_Comm_size failed");
if (++info->closing == comm_size - 1) {
/* Free the freelist -- this call never fails */
H5FD_free_freelist((H5FD_t*)&info->file);
/* All processes have closed the file - remove it from list */
if (H5FP_remove_file_id_from_list(req->file_id) != SUCCEED) {
exit_state = H5FP_STATUS_BAD_FILE_ID;
HGOTO_ERROR(H5E_FPHDF5, H5E_NOTFOUND, FAIL,
"cannot remove file ID from list");
}
}
} else {
HGOTO_ERROR(H5E_FPHDF5, H5E_NOTFOUND, FAIL,
"can't find information for file");
}
done:
H5FP_send_reply(req->proc_rank, req->req_id, req->file_id, exit_state);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_alloc_request
* Purpose: Handle a request to allocate data from the file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 19. February 2003
* Modifications:
*/
static herr_t
H5FP_sap_handle_alloc_request(H5FP_request_t *req)
{
H5FP_alloc_t sap_alloc;
H5FP_file_info *info;
int mrc;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOINIT(H5FP_sap_handle_alloc_request);
sap_alloc.req_id = req->req_id;
sap_alloc.file_id = req->file_id;
sap_alloc.status = H5FP_STATUS_OK;
sap_alloc.mem_type = req->mem_type;
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
/*
* Try allocating from the free-list that is kept on the server
* first. If that fails, then call the specified allocation
* functions depending upon what type of data is being allocated.
*
* Note: H5P_DEFAULT is passed in as the data xfer property list.
* This is okay since the only situation where that will be used
* is if you have a "hole" in the middle of your metadata (in
* aggregate mode) that needs to be freed. We've turned off
* metadata aggregation for FPHDF5 because we don't have the
* proper information.
*
* Whatta pain.
*/
if ((sap_alloc.addr = H5FD_alloc((H5FD_t*)&info->file, req->mem_type, H5P_DEFAULT,
req->meta_block_size)) == HADDR_UNDEF) {
sap_alloc.status = H5FP_STATUS_CANT_ALLOC;
HGOTO_ERROR(H5E_VFL, H5E_CANTINIT, FAIL,
"SAP unable to allocate file memory");
}
/* Get the EOA. */
sap_alloc.eoa = ((H5FD_fphdf5_t*)&info->file)->eoa;
sap_alloc.status = H5FP_STATUS_OK;
} else {
sap_alloc.addr = HADDR_UNDEF;
sap_alloc.eoa = HADDR_UNDEF;
sap_alloc.status = H5FP_STATUS_CANT_ALLOC;
}
done:
if ((mrc = MPI_Send(&sap_alloc, 1, H5FP_alloc, (int)req->proc_rank,
H5FP_TAG_ALLOC, H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_DONE_ERROR(FAIL, "MPI_Send failed", mrc);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_free_request
* Purpose: Handle a request to free data from the file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 31. March 2003
* Modifications:
*/
static herr_t
H5FP_sap_handle_free_request(H5FP_request_t *req)
{
H5FP_alloc_t sap_alloc;
H5FP_file_info *info;
H5FP_status_t exit_state = H5FP_STATUS_OK;
herr_t ret_value = SUCCEED;
int mrc;
FUNC_ENTER_NOINIT(H5FP_sap_handle_free_request);
sap_alloc.req_id = req->req_id;
sap_alloc.file_id = req->file_id;
sap_alloc.status = H5FP_STATUS_OK;
sap_alloc.mem_type = req->mem_type;
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
if (H5FD_free((H5FD_t*)&info->file, req->mem_type, H5P_DEFAULT,
req->addr, req->meta_block_size) != SUCCEED) {
exit_state = H5FP_STATUS_CANT_FREE;
sap_alloc.status = H5FP_STATUS_CANT_FREE;
HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, FAIL,
"SAP unable to free metadata block");
}
/* Get the EOA. */
sap_alloc.eoa = ((H5FD_fphdf5_t*)&info->file)->eoa;
sap_alloc.status = H5FP_STATUS_OK;
} else {
sap_alloc.status = H5FP_STATUS_CANT_FREE;
}
done:
if ((mrc = MPI_Send(&sap_alloc, 1, H5FP_alloc, (int)req->proc_rank,
H5FP_TAG_ALLOC, H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_DONE_ERROR(FAIL, "MPI_Send failed", mrc);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_get_eoa_request
* Purpose: Handle a request for the EOA of the file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 31. October 2003
* Modifications:
*/
static herr_t
H5FP_sap_handle_get_eoa_request(H5FP_request_t *req)
{
H5FP_eoa_t sap_eoa;
H5FP_file_info *info;
int mrc;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOINIT(H5FP_sap_handle_get_eoa_request);
sap_eoa.req_id = req->req_id;
sap_eoa.file_id = req->file_id;
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
/* Get the EOA. */
sap_eoa.eoa = ((H5FD_fphdf5_t*)&info->file)->eoa;
sap_eoa.status = H5FP_STATUS_OK;
} else {
sap_eoa.eoa = HADDR_UNDEF;
sap_eoa.status = H5FP_STATUS_CANT_ALLOC;
ret_value = FAIL;
}
done:
if ((mrc = MPI_Send(&sap_eoa, 1, H5FP_eoa, (int)req->proc_rank,
H5FP_TAG_EOA, H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_DONE_ERROR(FAIL, "MPI_Send failed", mrc);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_set_eoa_request
* Purpose: Handle a request setting the EOA of the file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 31. October 2003
* Modifications:
*/
static herr_t
H5FP_sap_handle_set_eoa_request(H5FP_request_t *req)
{
H5FP_status_t exit_state = H5FP_STATUS_OK;
H5FP_file_info *info;
int mrc;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOINIT(H5FP_sap_handle_set_eoa_request);
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
/* Get the EOA. */
((H5FD_fphdf5_t*)&info->file)->eoa = req->addr;
exit_state = H5FP_STATUS_OK;
} else {
exit_state = H5FP_STATUS_CANT_ALLOC;
ret_value = FAIL;
}
done:
H5FP_send_reply(req->proc_rank, req->req_id, req->file_id, exit_state);
FUNC_LEAVE_NOAPI(ret_value);
}
/*
* Function: H5FP_sap_handle_update_eoma_eosda_request
* Purpose: Handle a request to update the EOMA and EOSDA for a file.
* Return: Success: SUCCEED
* Failure: FAIL
* Programmer: Bill Wendling, 02. April 2003
* Modifications:
*/
static herr_t
H5FP_sap_handle_update_eoma_eosda_request(H5FP_request_t *req)
{
H5FP_eoa_t sap_eoa;
H5FP_file_info *info;
H5FP_status_t exit_state = H5FP_STATUS_OK;
herr_t ret_value = SUCCEED;
int mrc;
FUNC_ENTER_NOINIT(H5FP_sap_handle_update_eoma_eosda_request);
sap_eoa.req_id = req->req_id;
sap_eoa.file_id = req->file_id;
sap_eoa.status = H5FP_STATUS_OK;
if ((info = H5FP_find_file_info(req->file_id)) != NULL) {
H5FD_t *f = (H5FD_t*)&info->file;
if (f->eoma)
if (H5FD_free(f, H5FD_MEM_DEFAULT, H5P_DEFAULT,
f->eoma, f->cur_meta_block_size) != SUCCEED) {
exit_state = H5FP_STATUS_CANT_FREE;
sap_eoa.status = H5FP_STATUS_CANT_FREE;
HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, FAIL,
"SAP unable to free metadata block");
}
/* Reset metadata block information, just in case */
f->eoma = 0;
f->cur_meta_block_size = 0;
if (f->eosda)
if (H5FD_free(f, H5FD_MEM_DRAW, H5P_DEFAULT,
f->eosda, f->cur_sdata_block_size) != SUCCEED) {
exit_state = H5FP_STATUS_CANT_FREE;
sap_eoa.status = H5FP_STATUS_CANT_FREE;
HGOTO_ERROR(H5E_VFL, H5E_CANTFREE, FAIL,
"SAP unable to free 'small data' block");
}
/* Reset "small data" block information, just in case */
f->eosda = 0;
f->cur_sdata_block_size = 0;
/* Get the EOA. */
sap_eoa.eoa = ((H5FD_fphdf5_t*)&info->file)->eoa;
} else {
sap_eoa.eoa = HADDR_UNDEF;
sap_eoa.status = H5FP_STATUS_CANT_FREE;
}
done:
if ((mrc = MPI_Send(&sap_eoa, 1, H5FP_eoa, (int)req->proc_rank,
H5FP_TAG_EOA, H5FP_SAP_COMM)) != MPI_SUCCESS)
HMPI_DONE_ERROR(FAIL, "MPI_Send failed", mrc);
FUNC_LEAVE_NOAPI(ret_value);
}
#endif /* H5_HAVE_FPHDF5 */
|