1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Quincey Koziol <koziol@ncsa.uiuc.edu>
* Tuesday, May 2, 2006
*
* Purpose: Free space tracking functions.
*
* Note: (Used to be in the H5HFflist.c file, prior to the date above)
*
*/
/****************/
/* Module Setup */
/****************/
#define H5FS_PACKAGE /*suppress error about including H5FSpkg */
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5FSpkg.h" /* File free space */
#include "H5MFprivate.h" /* File memory management */
/****************/
/* Local Macros */
/****************/
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Package Typedefs */
/********************/
/********************/
/* Local Prototypes */
/********************/
/*********************/
/* Package Variables */
/*********************/
/* Declare a free list to manage the H5FS_section_class_t sequence information */
H5FL_SEQ_DEFINE(H5FS_section_class_t);
/* Declare a free list to manage the H5FS_t struct */
H5FL_DEFINE(H5FS_t);
/*****************************/
/* Library Private Variables */
/*****************************/
/*******************/
/* Local Variables */
/*******************/
/*-------------------------------------------------------------------------
* Function: H5FS_create
*
* Purpose: Allocate & initialize file free space info
*
* Return: Success: Pointer to free space structure
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* Tuesday, March 7, 2006
*
*-------------------------------------------------------------------------
*/
H5FS_t *
H5FS_create(H5F_t *f, hid_t dxpl_id, haddr_t *fs_addr, const H5FS_create_t *fs_create,
size_t nclasses, const H5FS_section_class_t *classes[], void *cls_init_udata)
{
H5FS_t *fspace = NULL; /* New free space structure */
H5FS_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5FS_create, NULL)
/* Check arguments. */
HDassert(fs_addr);
HDassert(fs_create->shrink_percent);
HDassert(fs_create->shrink_percent < fs_create->expand_percent);
HDassert(fs_create->max_sect_size);
HDassert(nclasses == 0 || classes);
/*
* Allocate free space structure
*/
if(NULL == (fspace = H5FS_new(nclasses, classes, cls_init_udata)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for free space free list")
/* Allocate space for the free space header */
if(HADDR_UNDEF == (fspace->addr = H5MF_alloc(f, H5FD_MEM_FSPACE_HDR, dxpl_id, (hsize_t)H5FS_HEADER_SIZE(f))))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "file allocation failed for free space header")
*fs_addr = fspace->addr;
/* Initialize creation information for free space manager */
fspace->client = fs_create->client;
fspace->shrink_percent = fs_create->shrink_percent;
fspace->expand_percent = fs_create->expand_percent;
fspace->max_sect_addr = fs_create->max_sect_addr;
fspace->max_sect_size = fs_create->max_sect_size;
/* Cache the new free space header (pinned) */
if(H5AC_set(f, dxpl_id, H5AC_FSPACE_HDR, fspace->addr, fspace, H5AC__PIN_ENTRY_FLAG) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTINIT, NULL, "can't add free space header to cache")
/* Set the return value */
ret_value = fspace;
done:
if(!ret_value && fspace)
(void)H5FS_cache_hdr_dest(f, fspace);
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_create() */
/*-------------------------------------------------------------------------
* Function: H5FS_open
*
* Purpose: Open an existing file free space info structure on disk
*
* Return: Success: Pointer to free space structure
*
* Failure: NULL
*
* Programmer: Quincey Koziol
* Tuesday, May 2, 2006
*
*-------------------------------------------------------------------------
*/
H5FS_t *
H5FS_open(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr, size_t nclasses,
const H5FS_section_class_t *classes[], void *cls_init_udata)
{
H5FS_t *fspace = NULL; /* New free space structure */
H5FS_prot_t fs_prot; /* Information for protecting free space manager */
unsigned fspace_status = 0; /* Free space header's status in the metadata cache */
H5FS_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(H5FS_open, NULL)
#ifdef QAK
HDfprintf(stderr, "%s: Opening free space manager\n", FUNC);
#endif /* QAK */
/* Check arguments. */
HDassert(H5F_addr_defined(fs_addr));
HDassert(nclasses);
HDassert(classes);
/* Initialize user data for protecting the free space manager */
fs_prot.nclasses = nclasses;
fs_prot.classes = classes;
fs_prot.cls_init_udata = cls_init_udata;
/* Protect the free space header */
if(NULL == (fspace = H5AC_protect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, &fs_prot, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_FSPACE, H5E_CANTPROTECT, NULL, "unable to load free space header")
#ifdef QAK
HDfprintf(stderr, "%s: fspace->sect_addr = %a\n", FUNC, fspace->sect_addr);
HDfprintf(stderr, "%s: fspace->sect_size = %Hu\n", FUNC, fspace->sect_size);
HDfprintf(stderr, "%s: fspace->alloc_sect_size = %Hu\n", FUNC, fspace->alloc_sect_size);
HDfprintf(stderr, "%s: fspace->sinfo = %p\n", FUNC, fspace->sinfo);
#endif /* QAK */
/* Check the free space header's status in the metadata cache */
if(H5AC_get_entry_status(f, fs_addr, &fspace_status) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTGET, NULL, "unable to check metadata cache status for free space header")
/* If the free space header isn't already pinned, pin it now */
/* (could still be pinned from it's section info still hanging around in the cache) */
if(!(fspace_status & H5AC_ES__IS_PINNED)) {
/* Pin free space header in the cache */
if(H5AC_pin_protected_entry(f, fspace) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTPIN, NULL, "unable to pin free space header")
} /* end if */
/* Unlock free space header, now pinned */
if(H5AC_unprotect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, fspace, H5AC__NO_FLAGS_SET) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, NULL, "unable to release free space header")
/* Set return value */
ret_value = fspace;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_open() */
/*-------------------------------------------------------------------------
* Function: H5FS_delete
*
* Purpose: Delete a free space manager on disk
*
* Return: Success: non-negative
*
* Failure: negative
*
* Programmer: Quincey Koziol
* Tuesday, May 30, 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_delete(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr)
{
H5FS_t *fspace = NULL; /* Free space header loaded from file */
H5FS_prot_t fs_prot; /* Temporary information for protecting free space header */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5FS_delete, FAIL)
#ifdef QAK
HDfprintf(stderr, "%s: Deleting free space manager\n", FUNC);
#endif /* QAK */
/* Check arguments. */
HDassert(f);
HDassert(H5F_addr_defined(fs_addr));
/* Initialize user data for protecting the free space manager */
/* (no class information necessary for delete) */
fs_prot.nclasses = 0;
fs_prot.classes = NULL;
fs_prot.cls_init_udata = NULL;
/* Protect the free space header */
if(NULL == (fspace = H5AC_protect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, &fs_prot, NULL, H5AC_WRITE)))
HGOTO_ERROR(H5E_FSPACE, H5E_CANTPROTECT, FAIL, "unable to protect free space header")
/* Delete serialized section storage, if there are any */
#ifdef QAK
HDfprintf(stderr, "%s: fspace->sect_addr = %a\n", FUNC, fspace->sect_addr);
#endif /* QAK */
if(fspace->serial_sect_count > 0) {
unsigned sinfo_status = 0; /* Free space section info's status in the metadata cache */
/* Sanity check */
HDassert(H5F_addr_defined(fspace->sect_addr));
HDassert(fspace->sect_size > 0);
/* Check the free space section info's status in the metadata cache */
if(H5AC_get_entry_status(f, fspace->sect_addr, &sinfo_status) < 0)
HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "unable to check metadata cache status for free space section info")
/* If the free space section info is in the cache, expunge it now */
if(sinfo_status & H5AC_ES__IN_CACHE) {
/* Sanity checks on direct block */
HDassert(!(sinfo_status & H5AC_ES__IS_PINNED));
HDassert(!(sinfo_status & H5AC_ES__IS_PROTECTED));
#ifdef QAK
HDfprintf(stderr, "%s: Expunging free space section info from cache\n", FUNC);
#endif /* QAK */
/* Evict the free space section info from the metadata cache */
if(H5AC_expunge_entry(f, dxpl_id, H5AC_FSPACE_SINFO, fspace->sect_addr) < 0)
HGOTO_ERROR(H5E_HEAP, H5E_CANTREMOVE, FAIL, "unable to remove free space section info from cache")
#ifdef QAK
HDfprintf(stderr, "%s: Done expunging free space section info from cache\n", FUNC);
#endif /* QAK */
} /* end if */
/* Release the space in the file */
if(H5MF_xfree(f, H5FD_MEM_FSPACE_SINFO, dxpl_id, fspace->sect_addr, fspace->alloc_sect_size) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space sections")
} /* end if */
/* Release header's disk space */
if(H5MF_xfree(f, H5FD_MEM_FSPACE_HDR, dxpl_id, fs_addr, (hsize_t)H5FS_HEADER_SIZE(f))<0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space header")
/* Release the free space header */
if(H5AC_unprotect(f, dxpl_id, H5AC_FSPACE_HDR, fs_addr, fspace, H5AC__DELETED_FLAG) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, FAIL, "unable to release free space header")
fspace = NULL;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_delete() */
/*-------------------------------------------------------------------------
* Function: H5FS_close
*
* Purpose: Destroy & deallocate free list structure, serializing sections
* in the bins
*
* Return: Success: non-negative
*
* Failure: negative
*
* Programmer: Quincey Koziol
* Tuesday, March 7, 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_close(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5FS_close, FAIL)
/* Check arguments. */
HDassert(f);
HDassert(fspace);
#ifdef QAK
HDfprintf(stderr, "%s: Entering\n", FUNC);
#endif /* QAK */
/* Check if section info is valid */
if(fspace->sinfo) {
HDassert(H5F_addr_defined(fspace->sect_addr));
/* Unpin the free space section info in the cache */
if(H5AC_unpin_entry(f, fspace->sinfo) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPIN, FAIL, "unable to unpin free space section info")
/* If there aren't any sections being managed, free the space for the sections */
#ifdef QAK
HDfprintf(stderr, "%s: fspace->tot_sect_count = %Hu\n", FUNC, fspace->tot_sect_count);
#endif /* QAK */
if(fspace->tot_sect_count == 0) {
haddr_t old_addr; /* Old section info address */
HDassert(fspace->serial_sect_count == 0);
HDassert(fspace->ghost_sect_count == 0);
/* Free previous serialized sections disk space */
old_addr = fspace->sect_addr;
if(H5MF_xfree(f, H5FD_MEM_FSPACE_SINFO, dxpl_id, old_addr, fspace->alloc_sect_size) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space sections")
/* Reset section info */
fspace->sect_addr = HADDR_UNDEF;
fspace->alloc_sect_size = fspace->sect_size = 0;
/* Mark free space header as dirty */
if(H5AC_mark_pinned_or_protected_entry_dirty(f, fspace) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTMARKDIRTY, FAIL, "unable to mark free space header as dirty")
/* Evict the section info from the metadata cache */
if(H5AC_expunge_entry(f, dxpl_id, H5AC_FSPACE_SINFO, old_addr) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTREMOVE, FAIL, "unable to remove free space section info from cache")
} /* end if */
} /* end if */
else {
/* Unpin the free space header in the cache */
/* (the section info destructor would unpin it if the section info existed) */
if(H5AC_unpin_entry(f, fspace) < 0)
HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPIN, FAIL, "unable to unpin free space header")
} /* end else */
/* Reset the header's pointer to the section info, so it will get pinned again
* if the free space header is still in the metadata cache when the free
* space manager is re-opened.
*/
fspace->sinfo = NULL;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_close() */
/*-------------------------------------------------------------------------
* Function: H5FS_new
*
* Purpose: Create new free space manager structure
*
* Return: Success: non-NULL, pointer to new free space manager struct
* Failure: NULL
*
* Programmer: Quincey Koziol
* Monday, July 31, 2006
*
*-------------------------------------------------------------------------
*/
H5FS_t *
H5FS_new(size_t nclasses, const H5FS_section_class_t *classes[],
void *cls_init_udata)
{
H5FS_t *fspace; /* Free space manager */
size_t u; /* Local index variable */
H5FS_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI_NOINIT(H5FS_new)
/* Check arguments. */
HDassert(nclasses == 0 || (nclasses > 0 && classes));
/*
* Allocate free space structure
*/
if(NULL == (fspace = H5FL_CALLOC(H5FS_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for free space free list")
/* Set immutable free list parameters */
fspace->nclasses = nclasses;
if(nclasses > 0) {
if(NULL == (fspace->sect_cls = H5FL_SEQ_MALLOC(H5FS_section_class_t, nclasses)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for free space section class array")
/* Initialize the section classes for this free space list */
for(u = 0; u < nclasses; u++) {
/* Make certain that section class type can be used as an array index into this array */
HDassert(u == classes[u]->type);
/* Copy the class information into the free space manager */
HDmemcpy(&fspace->sect_cls[u], classes[u], sizeof(H5FS_section_class_t));
/* Call the class initialization routine, if there is one */
if(fspace->sect_cls[u].init_cls)
if((fspace->sect_cls[u].init_cls)(&fspace->sect_cls[u], cls_init_udata) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, NULL, "unable to initialize section class")
} /* end for */
} /* end if */
/* Initialize non-zero information for new free space manager */
fspace->addr = HADDR_UNDEF;
fspace->sect_addr = HADDR_UNDEF;
/* Set return value */
ret_value = fspace;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5FS_new() */
#ifdef H5FS_DEBUG
/*-------------------------------------------------------------------------
* Function: H5FS_assert
*
* Purpose: Verify that the free space manager is mostly sane
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
* koziol@hdfgroup.org
* Jul 17 2006
*
*-------------------------------------------------------------------------
*/
herr_t
H5FS_assert(const H5FS_t *fspace)
{
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5FS_assert)
#ifdef QAK
HDfprintf(stderr, "%s: fspace->hdr->tot_sect_count = %Hu\n", "H5FS_assert", fspace->hdr->tot_sect_count);
#endif /* QAK */
/* Sanity check sections */
H5FS_sect_assert(fspace);
/* General assumptions about the section size counts */
HDassert(fspace->sinfo->tot_size_count >= fspace->sinfo->serial_size_count);
HDassert(fspace->sinfo->tot_size_count >= fspace->sinfo->ghost_size_count);
/* General assumptions about the section counts */
HDassert(fspace->tot_sect_count >= fspace->serial_sect_count);
HDassert(fspace->tot_sect_count >= fspace->ghost_sect_count);
HDassert(fspace->tot_sect_count == (fspace->serial_sect_count + fspace->ghost_sect_count));
#ifdef QAK
HDassert(fspace->serial_sect_count > 0 || fspace->ghost_sect_count == 0);
#endif /* QAK */
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5FS_assert() */
#endif /* H5FS_DEBUG */
|