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|
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*-------------------------------------------------------------------------
*
* Created: H5Fmpi.c
*
* Purpose: MPI-related routines.
*
*-------------------------------------------------------------------------
*/
/****************/
/* Module Setup */
/****************/
#include "H5Fmodule.h" /* This source code file is part of the H5F module */
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5CXprivate.h" /* API Contexts */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* File access */
#include "H5FDprivate.h" /* File drivers */
#include "H5Iprivate.h" /* IDs */
#include "H5VLnative_private.h" /* Native VOL connector */
/****************/
/* Local Macros */
/****************/
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Package Typedefs */
/********************/
/********************/
/* Local Prototypes */
/********************/
/*********************/
/* Package Variables */
/*********************/
/*****************************/
/* Library Private Variables */
/*****************************/
/*******************/
/* Local Variables */
/*******************/
#ifdef H5_HAVE_PARALLEL
/*-------------------------------------------------------------------------
* Function: H5F_mpi_get_rank
*
* Purpose: Retrieves the rank of an MPI process.
*
* Return: Success: The rank (non-negative)
*
* Failure: Negative
*
*-------------------------------------------------------------------------
*/
int
H5F_mpi_get_rank(const H5F_t *f)
{
int ret_value = -1;
FUNC_ENTER_NOAPI((-1))
assert(f && f->shared);
/* Dispatch to driver */
if ((ret_value = H5FD_mpi_get_rank(f->shared->lf)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, (-1), "driver get_rank request failed");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_mpi_get_rank() */
/*-------------------------------------------------------------------------
* Function: H5F_mpi_get_comm
*
* Purpose: Retrieves the file's MPI_Comm communicator object
*
* Return: Success: The communicator object
* Failure: MPI_COMM_NULL
*
*-------------------------------------------------------------------------
*/
MPI_Comm
H5F_mpi_get_comm(const H5F_t *f)
{
MPI_Comm ret_value = MPI_COMM_NULL;
FUNC_ENTER_NOAPI(MPI_COMM_NULL)
assert(f && f->shared);
/* Dispatch to driver */
if ((ret_value = H5FD_mpi_get_comm(f->shared->lf)) == MPI_COMM_NULL)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, MPI_COMM_NULL, "driver get_comm request failed");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_mpi_get_comm() */
/*-------------------------------------------------------------------------
* Function: H5F_mpi_get_info
*
* Purpose: Retrieves the file's MPI_Info info object
*
* Return: Success: The info object
* Failure: MPI_INFO_NULL
*
*-------------------------------------------------------------------------
*/
MPI_Info
H5F_mpi_get_info(const H5F_t *f)
{
MPI_Info ret_value = MPI_INFO_NULL;
FUNC_ENTER_NOAPI(MPI_INFO_NULL)
assert(f && f->shared);
/* Dispatch to driver */
if ((ret_value = H5FD_mpi_get_info(f->shared->lf)) == MPI_INFO_NULL)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, MPI_INFO_NULL, "driver get_info request failed");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_mpi_get_info() */
/*-------------------------------------------------------------------------
* Function: H5F_shared_mpi_get_size
*
* Purpose: Retrieves the size of an MPI process.
*
* Return: Success: The size (positive)
*
* Failure: Negative
*
*-------------------------------------------------------------------------
*/
int
H5F_shared_mpi_get_size(const H5F_shared_t *f_sh)
{
int ret_value = -1;
FUNC_ENTER_NOAPI((-1))
assert(f_sh);
/* Dispatch to driver */
if ((ret_value = H5FD_mpi_get_size(f_sh->lf)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, (-1), "driver get_size request failed");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_shared_mpi_get_size() */
/*-------------------------------------------------------------------------
* Function: H5F_mpi_get_size
*
* Purpose: Retrieves the size of an MPI process.
*
* Return: Success: The size (positive)
*
* Failure: Negative
*
*-------------------------------------------------------------------------
*/
int
H5F_mpi_get_size(const H5F_t *f)
{
int ret_value = -1;
FUNC_ENTER_NOAPI((-1))
assert(f && f->shared);
/* Dispatch to driver */
if ((ret_value = H5FD_mpi_get_size(f->shared->lf)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, (-1), "driver get_size request failed");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_mpi_get_size() */
/*-------------------------------------------------------------------------
* Function: H5F__set_mpi_atomicity
*
* Purpose: Private call to set the atomicity mode
*
* Return: SUCCEED/FAIL
*
*-------------------------------------------------------------------------
*/
herr_t
H5F__set_mpi_atomicity(H5F_t *file, bool flag)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_PACKAGE
/* Check args */
assert(file);
/* Check VFD */
if (!H5F_HAS_FEATURE(file, H5FD_FEAT_HAS_MPI))
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL,
"incorrect VFL driver, does not support MPI atomicity mode");
/* Set atomicity value */
if (H5FD_set_mpio_atomicity(file->shared->lf, flag) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set atomicity flag");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__set_mpi_atomicity() */
/*-------------------------------------------------------------------------
* Function: H5Fset_mpi_atomicity
*
* Purpose: Sets the atomicity mode
*
* Return: Success: Non-negative
* Failure: Negative
*
*-------------------------------------------------------------------------
*/
herr_t
H5Fset_mpi_atomicity(hid_t file_id, hbool_t flag)
{
H5VL_object_t *vol_obj; /* File info */
H5VL_optional_args_t vol_cb_args; /* Arguments to VOL callback */
H5VL_native_file_optional_args_t file_opt_args; /* Arguments for optional operation */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "ib", file_id, flag);
/* Get the file object */
if (NULL == (vol_obj = (H5VL_object_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier");
/* Set up VOL callback arguments */
file_opt_args.set_mpi_atomicity.flag = flag;
vol_cb_args.op_type = H5VL_NATIVE_FILE_SET_MPI_ATOMICITY;
vol_cb_args.args = &file_opt_args;
/* Set atomicity value */
if (H5VL_file_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "unable to set MPI atomicity");
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fset_mpi_atomicity() */
/*-------------------------------------------------------------------------
* Function: H5F__get_mpi_atomicity
*
* Purpose: Private call to get the atomicity mode
*
* Return: SUCCEED/FAIL
*
*-------------------------------------------------------------------------
*/
herr_t
H5F__get_mpi_atomicity(const H5F_t *file, hbool_t *flag)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_PACKAGE
/* Check args */
assert(file);
assert(flag);
/* Check VFD */
if (!H5F_HAS_FEATURE(file, H5FD_FEAT_HAS_MPI))
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL,
"incorrect VFL driver, does not support MPI atomicity mode");
/* Get atomicity value */
if (H5FD_get_mpio_atomicity(file->shared->lf, flag) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get atomicity flag");
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__get_mpi_atomicity() */
/*-------------------------------------------------------------------------
* Function: H5Fget_mpi_atomicity
*
* Purpose: Returns the atomicity mode
*
* Return: Success: Non-negative
* Failure: Negative
*
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mpi_atomicity(hid_t file_id, bool *flag /*out*/)
{
H5VL_object_t *vol_obj; /* File info */
H5VL_optional_args_t vol_cb_args; /* Arguments to VOL callback */
H5VL_native_file_optional_args_t file_opt_args; /* Arguments for optional operation */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*b", file_id, flag);
/* Get the file object */
if (NULL == (vol_obj = (H5VL_object_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier");
/* Set up VOL callback arguments */
file_opt_args.get_mpi_atomicity.flag = flag;
vol_cb_args.op_type = H5VL_NATIVE_FILE_GET_MPI_ATOMICITY;
vol_cb_args.args = &file_opt_args;
/* Get atomicity value */
if (H5VL_file_optional(vol_obj, &vol_cb_args, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get MPI atomicity");
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Fget_mpi_atomicity() */
/*-------------------------------------------------------------------------
* Function: H5F_mpi_retrieve_comm
*
* Purpose: Retrieves an MPI communicator from the file the location ID
* is in. If the loc_id is invalid, the fapl_id is used to
* retrieve the communicator.
*
* Return: Success: Non-negative
*
* Failure: Negative
*
*-------------------------------------------------------------------------
*/
herr_t
H5F_mpi_retrieve_comm(hid_t loc_id, hid_t acspl_id, MPI_Comm *mpi_comm)
{
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(FAIL)
/* Sanity check */
assert(mpi_comm);
/* Set value to return to invalid MPI comm */
*mpi_comm = MPI_COMM_NULL;
/* if the loc_id is valid, then get the comm from the file
attached to the loc_id */
if (H5I_INVALID_HID != loc_id) {
H5G_loc_t loc;
H5F_t *f = NULL;
/* Retrieve the file structure */
if (H5G_loc(loc_id, &loc) < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a location");
f = loc.oloc->file;
assert(f);
/* Check if MPIO driver is used */
if (H5F_HAS_FEATURE(f, H5FD_FEAT_HAS_MPI)) {
/* retrieve the file communicator */
if (MPI_COMM_NULL == (*mpi_comm = H5F_mpi_get_comm(f)))
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MPI communicator");
}
}
/* otherwise, this is from H5Fopen or H5Fcreate and has to be collective */
else {
H5FD_driver_prop_t driver_prop; /* Property for driver ID & info */
H5P_genplist_t *plist; /* Property list pointer */
unsigned long driver_feat_flags;
H5FD_class_t *driver_class = NULL;
if (NULL == (plist = H5P_object_verify(acspl_id, H5P_FILE_ACCESS)))
HGOTO_ERROR(H5E_FILE, H5E_BADTYPE, FAIL, "not a file access list");
if (H5P_peek(plist, H5F_ACS_FILE_DRV_NAME, &driver_prop) < 0)
HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get driver ID & info");
if (NULL == (driver_class = H5FD_get_class(driver_prop.driver_id)))
HGOTO_ERROR(H5E_VFL, H5E_CANTGET, FAIL, "can't get driver class structure");
if (H5FD_driver_query(driver_class, &driver_feat_flags) < 0)
HGOTO_ERROR(H5E_VFL, H5E_CANTGET, FAIL, "can't get driver feature flags");
if (driver_feat_flags & H5FD_FEAT_HAS_MPI)
if (H5P_peek(plist, H5F_ACS_MPI_PARAMS_COMM_NAME, mpi_comm) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MPI communicator");
}
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_mpi_retrieve_comm */
/*-------------------------------------------------------------------------
* Function: H5F_get_coll_metadata_reads
*
* Purpose: Determines whether collective metadata reads should be
* performed. This routine is meant to be the single source of
* truth for the collective metadata reads status, as it
* coordinates between the file-global flag and the flag set
* for the current operation in the current API context.
*
* Return: true/false (can't fail)
*
*-------------------------------------------------------------------------
*/
bool
H5F_get_coll_metadata_reads(const H5F_t *file)
{
FUNC_ENTER_NOAPI_NOERR
assert(file && file->shared);
FUNC_LEAVE_NOAPI(H5F_shared_get_coll_metadata_reads(file->shared));
} /* end H5F_get_coll_metadata_reads() */
/*-------------------------------------------------------------------------
* Function: H5F_shared_get_coll_metadata_reads
*
* Purpose: Determines whether collective metadata reads should be
* performed. This routine is meant to be the single source of
* truth for the collective metadata reads status, as it
* coordinates between the file-global flag and the flag set
* for the current operation in the current API context.
*
* Return: true/false (can't fail)
*
*-------------------------------------------------------------------------
*/
bool
H5F_shared_get_coll_metadata_reads(const H5F_shared_t *f_sh)
{
H5P_coll_md_read_flag_t file_flag = H5P_USER_FALSE;
bool ret_value = false;
FUNC_ENTER_NOAPI_NOERR
assert(f_sh);
/* Retrieve the file-global flag */
file_flag = H5F_SHARED_COLL_MD_READ(f_sh);
/* If file flag is set to H5P_FORCE_FALSE, exit early
* with false, since collective metadata reads have
* been explicitly disabled somewhere in the library.
*/
if (H5P_FORCE_FALSE == file_flag)
ret_value = false;
else {
/* If file flag is set to H5P_USER_TRUE, ignore
* any settings in the API context. A file-global
* setting of H5P_USER_TRUE for collective metadata
* reads should ignore any settings on an Access
* Property List for an individual operation.
*/
if (H5P_USER_TRUE == file_flag)
ret_value = true;
else {
/* Get the collective metadata reads flag from
* the current API context.
*/
ret_value = H5CX_get_coll_metadata_read();
}
}
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_shared_get_coll_metadata_reads() */
/*-------------------------------------------------------------------------
* Function: H5F_set_coll_metadata_reads
*
* Purpose: Used to temporarily modify the collective metadata reads
* status. This is useful for cases where either:
*
* * Collective metadata reads are enabled, but need to be
* disabled for an operation about to occur that may trigger
* an independent metadata read (such as only rank 0 doing
* something)
*
* * Metadata reads are currently independent, but it is
* guaranteed that the application has maintained
* collectivity at the interface level (e.g., an operation
* that modifies metadata is being performed). In this case,
* it should be safe to enable collective metadata reads,
* barring any internal library issues that may occur
*
* After completion, the `file_flag` parameter will be set to
* the previous value of the file-global collective metadata
* reads flag. The `context_flag` parameter will be set to the
* previous value of the API context's collective metadata
* reads flag. Another call to this routine should be made to
* restore these values (see below warning).
*
* !! WARNING !!
* It is dangerous to modify the collective metadata reads
* status, as this can cause crashes, hangs and corruption in
* the HDF5 file when improperly done. Therefore, the
* `file_flag` and `context_flag` parameters are both
* mandatory, and it is assumed that the caller will guarantee
* these settings are restored with another call to this
* routine once the bracketed operation is complete.
* !! WARNING !!
*
* Return: Nothing
*
*-------------------------------------------------------------------------
*/
void
H5F_set_coll_metadata_reads(H5F_t *file, H5P_coll_md_read_flag_t *file_flag, bool *context_flag)
{
H5P_coll_md_read_flag_t prev_file_flag = H5P_USER_FALSE;
bool prev_context_flag = false;
FUNC_ENTER_NOAPI_NOERR
assert(file && file->shared);
assert(file_flag);
assert(context_flag);
/* Save old state */
prev_file_flag = H5F_COLL_MD_READ(file);
prev_context_flag = H5CX_get_coll_metadata_read();
/* Set new desired state */
if (prev_file_flag != *file_flag) {
file->shared->coll_md_read = *file_flag;
*file_flag = prev_file_flag;
}
if (prev_context_flag != *context_flag) {
H5CX_set_coll_metadata_read(*context_flag);
*context_flag = prev_context_flag;
}
FUNC_LEAVE_NOAPI_VOID
} /* end H5F_set_coll_metadata_reads() */
/*-------------------------------------------------------------------------
* Function: H5F_mpi_get_file_block_type
*
* Purpose: Creates an MPI derived datatype for communicating an
* H5F_block_t structure. If `commit` is specified as true,
* the resulting datatype will be committed and ready for
* use in communication. Otherwise, the type is only suitable
* for building other derived types.
*
* If true is returned through `new_type_derived`, this lets
* the caller know that the datatype has been derived and
* should be freed with MPI_Type_free once it is no longer
* needed.
*
* Return: Non-negative on success/Negative on failure
*
*-------------------------------------------------------------------------
*/
herr_t
H5F_mpi_get_file_block_type(bool commit, MPI_Datatype *new_type, bool *new_type_derived)
{
MPI_Datatype types[2];
MPI_Aint displacements[2];
int block_lengths[2];
int field_count;
int mpi_code;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(FAIL)
assert(new_type);
assert(new_type_derived);
*new_type_derived = false;
field_count = 2;
assert(field_count == sizeof(types) / sizeof(MPI_Datatype));
block_lengths[0] = 1;
block_lengths[1] = 1;
displacements[0] = offsetof(H5F_block_t, offset);
displacements[1] = offsetof(H5F_block_t, length);
types[0] = HADDR_AS_MPI_TYPE;
types[1] = HSIZE_AS_MPI_TYPE;
if (MPI_SUCCESS !=
(mpi_code = MPI_Type_create_struct(field_count, block_lengths, displacements, types, new_type)))
HMPI_GOTO_ERROR(FAIL, "MPI_Type_create_struct failed", mpi_code)
*new_type_derived = true;
if (commit && MPI_SUCCESS != (mpi_code = MPI_Type_commit(new_type)))
HMPI_GOTO_ERROR(FAIL, "MPI_Type_commit failed", mpi_code)
done:
if (ret_value < 0) {
if (*new_type_derived) {
if (MPI_SUCCESS != (mpi_code = MPI_Type_free(new_type)))
HMPI_DONE_ERROR(FAIL, "MPI_Type_free failed", mpi_code)
*new_type_derived = false;
}
}
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_mpi_get_file_block_type() */
#endif /* H5_HAVE_PARALLEL */
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