1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
1197
1198
1199
1200
1201
1202
1203
1204
1205
1206
1207
1208
1209
1210
1211
1212
1213
1214
1215
|
/*-------------------------------------------------------------------------
* Copyright (C) 1997-2001 National Center for Supercomputing Applications
* All rights reserved.
*
*-------------------------------------------------------------------------
*
* Created: snode.c
* Jun 26 1997
* Robb Matzke <matzke@llnl.gov>
*
* Purpose: Functions for handling symbol table nodes. A
* symbol table node is a small collection of symbol
* table entries. A B-tree usually points to the
* symbol table nodes for any given symbol table.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
#define H5G_PACKAGE /*suppress error message about including H5Gpkg.h */
#define H5F_PACKAGE /*suppress error about including H5Fpkg */
/* Packages needed by this file... */
#include "H5private.h" /*library */
#include "H5ACprivate.h" /*cache */
#include "H5Bprivate.h" /*B-link trees */
#include "H5Eprivate.h" /*error handling */
#include "H5Fpkg.h" /*file access */
#include "H5FLprivate.h" /*Free Lists */
#include "H5Gpkg.h" /*me */
#include "H5HLprivate.h" /*local heap */
#include "H5MFprivate.h" /*file memory management */
#include "H5MMprivate.h" /*core memory management */
#include "H5Oprivate.h" /*header messages */
#include "H5Pprivate.h" /*property lists */
#include "H5FDmpio.h" /*the MPIO file driver */
#define PABLO_MASK H5G_node_mask
/* PRIVATE PROTOTYPES */
static herr_t H5G_node_decode_key(H5F_t *f, H5B_t *bt, uint8_t *raw,
void *_key);
static herr_t H5G_node_encode_key(H5F_t *f, H5B_t *bt, uint8_t *raw,
void *_key);
static size_t H5G_node_size(H5F_t *f);
static herr_t H5G_node_create(H5F_t *f, H5B_ins_t op, void *_lt_key,
void *_udata, void *_rt_key,
haddr_t *addr_p/*out*/);
static herr_t H5G_node_flush(H5F_t *f, hbool_t destroy, haddr_t addr,
H5G_node_t *sym);
static H5G_node_t *H5G_node_load(H5F_t *f, haddr_t addr, const void *_udata1,
void *_udata2);
static int H5G_node_cmp2(H5F_t *f, void *_lt_key, void *_udata,
void *_rt_key);
static int H5G_node_cmp3(H5F_t *f, void *_lt_key, void *_udata,
void *_rt_key);
static herr_t H5G_node_found(H5F_t *f, haddr_t addr, const void *_lt_key,
void *_udata, const void *_rt_key);
static H5B_ins_t H5G_node_insert(H5F_t *f, haddr_t addr, void *_lt_key,
hbool_t *lt_key_changed, void *_md_key,
void *_udata, void *_rt_key,
hbool_t *rt_key_changed,
haddr_t *new_node_p/*out*/);
static H5B_ins_t H5G_node_remove(H5F_t *f, haddr_t addr, void *lt_key,
hbool_t *lt_key_changed, void *udata,
void *rt_key, hbool_t *rt_key_changed);
static herr_t H5G_node_iterate(H5F_t *f, void *_lt_key, haddr_t addr,
void *_rt_key, void *_udata);
static size_t H5G_node_sizeof_rkey(H5F_t *f, const void *_udata);
/* H5G inherits cache-like properties from H5AC */
const H5AC_class_t H5AC_SNODE[1] = {{
H5AC_SNODE_ID,
(H5AC_load_func_t)H5G_node_load,
(herr_t (*)(H5F_t*, hbool_t, haddr_t, void*))H5G_node_flush,
}};
/* H5G inherits B-tree like properties from H5B */
H5B_class_t H5B_SNODE[1] = {{
H5B_SNODE_ID, /*id */
sizeof(H5G_node_key_t), /*sizeof_nkey */
H5G_node_sizeof_rkey, /*get_sizeof_rkey */
H5G_node_create, /*new */
H5G_node_cmp2, /*cmp2 */
H5G_node_cmp3, /*cmp3 */
H5G_node_found, /*found */
H5G_node_insert, /*insert */
TRUE, /*follow min branch? */
TRUE, /*follow max branch? */
H5G_node_remove, /*remove */
H5G_node_iterate, /*list */
H5G_node_decode_key, /*decode */
H5G_node_encode_key, /*encode */
NULL, /*debug key */
}};
/* Interface initialization */
static int interface_initialize_g = 0;
#define INTERFACE_INIT NULL
/* Declare a free list to manage the H5G_node_t struct */
H5FL_DEFINE_STATIC(H5G_node_t);
/* Declare a free list to manage arrays of H5G_entry_t's */
H5FL_ARR_DEFINE_STATIC(H5G_entry_t,-1);
/* Declare a free list to manage blocks of symbol node data */
H5FL_BLK_DEFINE_STATIC(symbol_node);
/*-------------------------------------------------------------------------
* Function: H5G_node_sizeof_rkey
*
* Purpose: Returns the size of a raw B-link tree key for the specified
* file.
*
* Return: Success: Size of the key.
*
* Failure: never fails
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jul 14 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static size_t
H5G_node_sizeof_rkey(H5F_t *f, const void * UNUSED udata)
{
return H5F_SIZEOF_SIZE(f); /*the name offset */
}
/*-------------------------------------------------------------------------
* Function: H5G_node_decode_key
*
* Purpose: Decodes a raw key into a native key.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jul 8 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_node_decode_key(H5F_t *f, H5B_t UNUSED *bt, uint8_t *raw, void *_key)
{
H5G_node_key_t *key = (H5G_node_key_t *) _key;
FUNC_ENTER(H5G_node_decode_key, FAIL);
assert(f);
assert(raw);
assert(key);
H5F_DECODE_LENGTH(f, raw, key->offset);
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_encode_key
*
* Purpose: Encodes a native key into a raw key.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jul 8 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_node_encode_key(H5F_t *f, H5B_t UNUSED *bt, uint8_t *raw, void *_key)
{
H5G_node_key_t *key = (H5G_node_key_t *) _key;
FUNC_ENTER(H5G_node_encode_key, FAIL);
assert(f);
assert(raw);
assert(key);
H5F_ENCODE_LENGTH(f, raw, key->offset);
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_size
*
* Purpose: Returns the total size of a symbol table node.
*
* Return: Success: Total size of the node in bytes.
*
* Failure: Never fails.
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static size_t
H5G_node_size(H5F_t *f)
{
return H5G_NODE_SIZEOF_HDR(f) +
(2 * H5G_NODE_K(f)) * H5G_SIZEOF_ENTRY(f);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_create
*
* Purpose: Creates a new empty symbol table node. This function is
* called by the B-tree insert function for an empty tree. It
* is also called internally to split a symbol node with LT_KEY
* and RT_KEY null pointers.
*
* Return: Success: Non-negative. The address of symbol table
* node is returned through the ADDR_P argument.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5G_node_create(H5F_t *f, H5B_ins_t UNUSED op, void *_lt_key,
void UNUSED *_udata, void *_rt_key, haddr_t *addr_p/*out*/)
{
H5G_node_key_t *lt_key = (H5G_node_key_t *) _lt_key;
H5G_node_key_t *rt_key = (H5G_node_key_t *) _rt_key;
H5G_node_t *sym = NULL;
hsize_t size = 0;
FUNC_ENTER(H5G_node_create, FAIL);
/*
* Check arguments.
*/
assert(f);
assert(H5B_INS_FIRST == op);
if (NULL==(sym = H5FL_ALLOC(H5G_node_t,1))) {
HRETURN_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,
"memory allocation failed");
}
size = H5G_node_size(f);
if (HADDR_UNDEF==(*addr_p=H5MF_alloc(f, H5FD_MEM_BTREE, size))) {
H5FL_FREE(H5G_node_t,sym);
HRETURN_ERROR(H5E_SYM, H5E_CANTINIT, FAIL,
"unable to allocate file space");
}
sym->dirty = TRUE;
sym->entry = H5FL_ARR_ALLOC(H5G_entry_t,(2*H5G_NODE_K(f)),1);
if (NULL==sym->entry) {
H5FL_FREE(H5G_node_t,sym);
HRETURN_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,
"memory allocation failed");
}
if (H5AC_set(f, H5AC_SNODE, *addr_p, sym) < 0) {
H5FL_ARR_FREE(H5G_entry_t,sym->entry);
H5FL_FREE(H5G_node_t,sym);
HRETURN_ERROR(H5E_SYM, H5E_CANTINIT, FAIL,
"unable to cache symbol table leaf node");
}
/*
* The left and right symbols in an empty tree are both the
* empty string stored at offset zero by the H5G functions. This
* allows the comparison functions to work correctly without knowing
* that there are no symbols.
*/
if (lt_key) lt_key->offset = 0;
if (rt_key) rt_key->offset = 0;
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_flush
*
* Purpose: Flush a symbol table node to disk.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
* rky, 1998-08-28
* Only p0 writes metadata to disk.
*
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*-------------------------------------------------------------------------
*/
static herr_t
H5G_node_flush(H5F_t *f, hbool_t destroy, haddr_t addr, H5G_node_t *sym)
{
uint8_t *buf = NULL, *p = NULL;
size_t size;
herr_t status;
int i;
FUNC_ENTER(H5G_node_flush, FAIL);
/*
* Check arguments.
*/
assert(f);
assert(H5F_addr_defined(addr));
assert(sym);
/*
* Look for dirty entries and set the node dirty flag.
*/
for (i=0; i<sym->nsyms; i++) {
if (sym->entry[i].dirty) sym->dirty = TRUE;
}
/*
* Write the symbol node to disk.
*/
if (sym->dirty) {
size = H5G_node_size(f);
/* Allocate temporary buffer */
if ((buf=H5FL_BLK_ALLOC(symbol_node,size, 0))==NULL)
HRETURN_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,
"memory allocation failed");
p=buf;
/* magic number */
HDmemcpy(p, H5G_NODE_MAGIC, H5G_NODE_SIZEOF_MAGIC);
p += 4;
/* version number */
*p++ = H5G_NODE_VERS;
/* reserved */
*p++ = 0;
/* number of symbols */
UINT16ENCODE(p, sym->nsyms);
/* entries */
H5G_ent_encode_vec(f, &p, sym->entry, sym->nsyms);
HDmemset(p, 0, size - (p - buf));
#ifdef H5_HAVE_PARALLEL
if (IS_H5FD_MPIO(f))
H5FD_mpio_tas_allsame(f->shared->lf, TRUE); /*only p0 will write*/
#endif /* H5_HAVE_PARALLEL */
status = H5F_block_write(f, H5FD_MEM_BTREE, addr, size, H5P_DATASET_XFER_DEFAULT, buf);
if (status < 0)
HRETURN_ERROR(H5E_SYM, H5E_WRITEERROR, FAIL,
"unable to write symbol table node to the file");
if (buf)
H5FL_BLK_FREE(symbol_node,buf);
}
/*
* Destroy the symbol node? This might happen if the node is being
* preempted from the cache.
*/
if (destroy) {
sym->entry = H5FL_ARR_FREE(H5G_entry_t,sym->entry);
H5FL_FREE(H5G_node_t,sym);
}
FUNC_LEAVE(SUCCEED);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_load
*
* Purpose: Loads a symbol table node from the file.
*
* Return: Success: Ptr to the new table.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*-------------------------------------------------------------------------
*/
static H5G_node_t *
H5G_node_load(H5F_t *f, haddr_t addr, const void * UNUSED _udata1,
void * UNUSED _udata2)
{
H5G_node_t *sym = NULL;
size_t size = 0;
uint8_t *buf = NULL;
const uint8_t *p = NULL;
H5G_node_t *ret_value = NULL; /*for error handling */
FUNC_ENTER(H5G_node_load, NULL);
/*
* Check arguments.
*/
assert(f);
assert(H5F_addr_defined(addr));
assert(!_udata1);
assert(NULL == _udata2);
/*
* Initialize variables.
*/
size = H5G_node_size(f);
if ((buf=H5FL_BLK_ALLOC(symbol_node,size,0))==NULL)
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL,
"memory allocation failed for symbol table node");
p=buf;
if (NULL==(sym = H5FL_ALLOC(H5G_node_t,1)) ||
NULL==(sym->entry=H5FL_ARR_ALLOC(H5G_entry_t,(2*H5G_NODE_K(f)),1))) {
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL,
"memory allocation failed");
}
if (H5F_block_read(f, H5FD_MEM_BTREE, addr, size, H5P_DATASET_XFER_DEFAULT, buf) < 0) {
HGOTO_ERROR(H5E_SYM, H5E_READERROR, NULL,
"unabel to read symbol table node");
}
/* magic */
if (HDmemcmp(p, H5G_NODE_MAGIC, H5G_NODE_SIZEOF_MAGIC)) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, NULL,
"bad symbol table node signature");
}
p += 4;
/* version */
if (H5G_NODE_VERS != *p++) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, NULL,
"bad symbol table node version");
}
/* reserved */
p++;
/* number of symbols */
UINT16DECODE(p, sym->nsyms);
/* entries */
if (H5G_ent_decode_vec(f, &p, sym->entry, sym->nsyms) < 0) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, NULL,
"unable to decode symbol table entries");
}
ret_value = sym;
done:
if (buf)
H5FL_BLK_FREE(symbol_node,buf);
if (!ret_value) {
if (sym) {
sym->entry = H5FL_ARR_FREE(H5G_entry_t,sym->entry);
sym = H5FL_FREE(H5G_node_t,sym);
}
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_cmp2
*
* Purpose: Compares two keys from a B-tree node (LT_KEY and RT_KEY).
* The UDATA pointer supplies extra data not contained in the
* keys (in this case, the heap address).
*
* Return: Success: negative if LT_KEY is less than RT_KEY.
*
* positive if LT_KEY is greater than RT_KEY.
*
* zero if LT_KEY and RT_KEY are equal.
*
* Failure: FAIL (same as LT_KEY<RT_KEY)
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
H5G_node_cmp2(H5F_t *f, void *_lt_key, void *_udata, void *_rt_key)
{
H5G_bt_ud1_t *udata = (H5G_bt_ud1_t *) _udata;
H5G_node_key_t *lt_key = (H5G_node_key_t *) _lt_key;
H5G_node_key_t *rt_key = (H5G_node_key_t *) _rt_key;
const char *s1, *s2;
int cmp;
FUNC_ENTER(H5G_node_cmp2, FAIL);
assert(udata);
assert(lt_key);
assert(rt_key);
if (NULL == (s1 = H5HL_peek(f, udata->heap_addr, lt_key->offset))) {
HRETURN_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL,
"unable to read symbol name");
}
if (NULL == (s2 = H5HL_peek(f, udata->heap_addr, rt_key->offset))) {
HRETURN_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL,
"unable to read symbol name");
}
cmp = HDstrcmp(s1, s2);
FUNC_LEAVE(cmp);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_cmp3
*
* Purpose: Compares two keys from a B-tree node (LT_KEY and RT_KEY)
* against another key (not necessarily the same type)
* pointed to by UDATA.
*
* Return: Success: negative if the UDATA key is less than
* or equal to the LT_KEY
*
* positive if the UDATA key is greater
* than the RT_KEY.
*
* zero if the UDATA key falls between
* the LT_KEY (exclusive) and the
* RT_KEY (inclusive).
*
* Failure: FAIL (same as UDATA < LT_KEY)
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
H5G_node_cmp3(H5F_t *f, void *_lt_key, void *_udata, void *_rt_key)
{
H5G_bt_ud1_t *udata = (H5G_bt_ud1_t *) _udata;
H5G_node_key_t *lt_key = (H5G_node_key_t *) _lt_key;
H5G_node_key_t *rt_key = (H5G_node_key_t *) _rt_key;
const char *s;
FUNC_ENTER(H5G_node_cmp3, FAIL);
/* left side */
if (NULL == (s = H5HL_peek(f, udata->heap_addr, lt_key->offset))) {
HRETURN_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL,
"unable to read symbol name");
}
if (HDstrcmp(udata->name, s) <= 0)
HRETURN(-1);
/* right side */
if (NULL == (s = H5HL_peek(f, udata->heap_addr, rt_key->offset))) {
HRETURN_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL,
"unable to read symbol name");
}
if (HDstrcmp(udata->name, s) > 0)
HRETURN(1);
FUNC_LEAVE(0);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_found
*
* Purpose: The B-tree search engine has found the symbol table node
* which contains the requested symbol if the symbol exists.
* This function should examine that node for the symbol and
* return information about the symbol through the UDATA
* structure which contains the symbol name on function
* entry.
*
* If the operation flag in UDATA is H5G_OPER_FIND, then
* the entry is copied from the symbol table to the UDATA
* entry field. Otherwise the entry is copied from the
* UDATA entry field to the symbol table.
*
* Return: Success: Non-negative if found and data returned through
* the UDATA pointer.
*
* Failure: Negative if not found.
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 23 1997
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*-------------------------------------------------------------------------
*/
static herr_t
H5G_node_found(H5F_t *f, haddr_t addr, const void * UNUSED _lt_key,
void *_udata, const void * UNUSED _rt_key)
{
H5G_bt_ud1_t *bt_udata = (H5G_bt_ud1_t *) _udata;
H5G_node_t *sn = NULL;
int lt = 0, idx = 0, rt, cmp = 1;
const char *s;
herr_t ret_value = FAIL;
FUNC_ENTER(H5G_node_found, FAIL);
/*
* Check arguments.
*/
assert(f);
assert(H5F_addr_defined(addr));
assert(bt_udata);
/*
* Load the symbol table node for exclusive access.
*/
if (NULL == (sn = H5AC_protect(f, H5AC_SNODE, addr, NULL, NULL))) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, FAIL,
"unable to protect symbol table node");
}
/*
* Binary search.
*/
rt = sn->nsyms;
while (lt < rt && cmp) {
idx = (lt + rt) / 2;
if (NULL == (s = H5HL_peek(f, bt_udata->heap_addr,
sn->entry[idx].name_off))) {
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL,
"unable to read symbol name");
}
cmp = HDstrcmp(bt_udata->name, s);
if (cmp < 0) {
rt = idx;
} else {
lt = idx + 1;
}
}
if (cmp) HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, FAIL, "not found");
switch (bt_udata->operation) {
case H5G_OPER_FIND:
/*
* The caller is querying the symbol entry. Return just a pointer to
* the entry. The pointer is valid until the next call to H5AC.
*/
bt_udata->ent = sn->entry[idx];
break;
default:
HRETURN_ERROR(H5E_SYM, H5E_UNSUPPORTED, FAIL,
"internal erorr (unknown symbol find operation)");
}
ret_value = SUCCEED;
done:
if (sn && H5AC_unprotect(f, H5AC_SNODE, addr, sn) < 0) {
HRETURN_ERROR(H5E_SYM, H5E_PROTECT, FAIL,
"unable to release symbol table node");
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_insert
*
* Purpose: The B-tree insertion engine has found the symbol table node
* which should receive the new symbol/address pair. This
* function adds it to that node unless it already existed.
*
* If the node has no room for the symbol then the node is
* split into two nodes. The original node contains the
* low values and the new node contains the high values.
* The new symbol table entry is added to either node as
* appropriate. When a split occurs, this function will
* write the maximum key of the low node to the MID buffer
* and return the address of the new node.
*
* If the new key is larger than RIGHT then update RIGHT
* with the new key.
*
* Return: Success: An insertion command for the caller, one of
* the H5B_INS_* constants. The address of the
* new node, if any, is returned through the
* NEW_NODE_P argument. NEW_NODE_P might not be
* initialized if the return value is
* H5B_INS_NOOP.
*
* Failure: H5B_INS_ERROR, NEW_NODE_P might not be
* initialized.
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 24 1997
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*-------------------------------------------------------------------------
*/
static H5B_ins_t
H5G_node_insert(H5F_t *f, haddr_t addr, void UNUSED *_lt_key,
hbool_t UNUSED *lt_key_changed, void *_md_key,
void *_udata, void *_rt_key, hbool_t UNUSED *rt_key_changed,
haddr_t *new_node_p)
{
H5G_node_key_t *md_key = (H5G_node_key_t *) _md_key;
H5G_node_key_t *rt_key = (H5G_node_key_t *) _rt_key;
H5G_bt_ud1_t *bt_udata = (H5G_bt_ud1_t *) _udata;
H5G_node_t *sn = NULL, *snrt = NULL;
size_t offset; /*offset of name in heap */
const char *s;
int idx = -1, cmp = 1;
int lt = 0, rt; /*binary search cntrs */
H5B_ins_t ret_value = H5B_INS_ERROR;
H5G_node_t *insert_into = NULL; /*node that gets new entry*/
FUNC_ENTER(H5G_node_insert, H5B_INS_ERROR);
/*
* Check arguments.
*/
assert(f);
assert(H5F_addr_defined(addr));
assert(md_key);
assert(rt_key);
assert(bt_udata);
assert(new_node_p);
/*
* Load the symbol node.
*/
if (NULL == (sn = H5AC_protect(f, H5AC_SNODE, addr, NULL, NULL))) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, H5B_INS_ERROR,
"unable to protect symbol table node");
}
/*
* Where does the new symbol get inserted? We use a binary search.
*/
rt = sn->nsyms;
while (lt < rt) {
idx = (lt + rt) / 2;
if (NULL == (s = H5HL_peek(f, bt_udata->heap_addr,
sn->entry[idx].name_off))) {
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, H5B_INS_ERROR,
"unable to read symbol name");
}
if (0 == (cmp = HDstrcmp(bt_udata->name, s))) {
/*already present */
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, H5B_INS_ERROR,
"symbol is already present in symbol table");
}
if (cmp < 0) {
rt = idx;
} else {
lt = idx + 1;
}
}
idx += cmp > 0 ? 1 : 0;
/*
* Add the new name to the heap.
*/
offset = H5HL_insert(f, bt_udata->heap_addr, HDstrlen(bt_udata->name)+1,
bt_udata->name);
bt_udata->ent.name_off = offset;
if (0==offset || (size_t)(-1)==offset) {
HGOTO_ERROR(H5E_SYM, H5E_CANTINSERT, H5B_INS_ERROR,
"unable to insert symbol name into heap");
}
if ((size_t)(sn->nsyms) >= 2*H5G_NODE_K(f)) {
/*
* The node is full. Split it into a left and right
* node and return the address of the new right node (the
* left node is at the same address as the original node).
*/
ret_value = H5B_INS_RIGHT;
/* The right node */
if (H5G_node_create(f, H5B_INS_FIRST, NULL, NULL, NULL,
new_node_p/*out*/)<0) {
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, H5B_INS_ERROR,
"unable to split symbol table node");
}
if (NULL==(snrt=H5AC_find(f, H5AC_SNODE, *new_node_p, NULL, NULL))) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, H5B_INS_ERROR,
"unable to split symbol table node");
}
HDmemcpy(snrt->entry, sn->entry + H5G_NODE_K(f),
H5G_NODE_K(f) * sizeof(H5G_entry_t));
snrt->nsyms = H5G_NODE_K(f);
snrt->dirty = TRUE;
/* The left node */
HDmemset(sn->entry + H5G_NODE_K(f), 0,
H5G_NODE_K(f) * sizeof(H5G_entry_t));
sn->nsyms = H5G_NODE_K(f);
sn->dirty = TRUE;
/* The middle key */
md_key->offset = sn->entry[sn->nsyms - 1].name_off;
/* Where to insert the new entry? */
if (idx <= (int)H5G_NODE_K(f)) {
insert_into = sn;
if (idx == (int)H5G_NODE_K(f))
md_key->offset = offset;
} else {
idx -= H5G_NODE_K(f);
insert_into = snrt;
if (idx == (int)H5G_NODE_K (f)) {
rt_key->offset = offset;
*rt_key_changed = TRUE;
}
}
} else {
/* Where to insert the new entry? */
ret_value = H5B_INS_NOOP;
sn->dirty = TRUE;
insert_into = sn;
if (idx == sn->nsyms) {
rt_key->offset = offset;
*rt_key_changed = TRUE;
}
}
/* Move entries */
HDmemmove(insert_into->entry + idx + 1,
insert_into->entry + idx,
(insert_into->nsyms - idx) * sizeof(H5G_entry_t));
insert_into->entry[idx] = bt_udata->ent;
insert_into->entry[idx].dirty = TRUE;
insert_into->nsyms += 1;
done:
if (sn && H5AC_unprotect(f, H5AC_SNODE, addr, sn) < 0) {
HRETURN_ERROR(H5E_SYM, H5E_PROTECT, H5B_INS_ERROR,
"unable to release symbol table node");
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_remove
*
* Purpose: The B-tree removal engine has found the symbol table node
* which should contain the name which is being removed. This
* function removes the name from the symbol table and
* decrements the link count on the object to which the name
* points.
*
* Return: Success: If all names are removed from the symbol
* table node then H5B_INS_REMOVE is returned;
* otherwise H5B_INS_NOOP is returned.
*
* Failure: H5B_INS_ERROR
*
* Programmer: Robb Matzke
* Thursday, September 24, 1998
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*-------------------------------------------------------------------------
*/
static H5B_ins_t
H5G_node_remove(H5F_t *f, haddr_t addr, void *_lt_key/*in,out*/,
hbool_t UNUSED *lt_key_changed/*out*/,
void *_udata/*in,out*/, void *_rt_key/*in,out*/,
hbool_t *rt_key_changed/*out*/)
{
H5G_node_key_t *lt_key = (H5G_node_key_t*)_lt_key;
H5G_node_key_t *rt_key = (H5G_node_key_t*)_rt_key;
H5G_bt_ud1_t *bt_udata = (H5G_bt_ud1_t*)_udata;
H5G_node_t *sn = NULL;
H5B_ins_t ret_value = H5B_INS_ERROR;
int lt=0, rt, idx=0, cmp=1;
const char *s = NULL;
FUNC_ENTER(H5G_node_remove, H5B_INS_ERROR);
/* Check arguments */
assert(f);
assert(H5F_addr_defined(addr));
assert(lt_key);
assert(rt_key);
assert(bt_udata);
/* Load the symbol table */
if (NULL==(sn=H5AC_protect(f, H5AC_SNODE, addr, NULL, NULL))) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, H5B_INS_ERROR,
"unable to protect symbol table node");
}
/* Find the name with a binary search */
rt = sn->nsyms;
while (lt<rt && cmp) {
idx = (lt+rt)/2;
if (NULL==(s=H5HL_peek(f, bt_udata->heap_addr,
sn->entry[idx].name_off))) {
HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, H5B_INS_ERROR,
"unable to read symbol name");
}
cmp = HDstrcmp(bt_udata->name, s);
if (cmp<0) {
rt = idx;
} else {
lt = idx+1;
}
}
if (cmp) HGOTO_ERROR(H5E_SYM, H5E_NOTFOUND, H5B_INS_ERROR, "not found");
if (H5G_CACHED_SLINK==sn->entry[idx].type) {
/* Remove the symbolic link value */
if ((s=H5HL_peek(f, bt_udata->heap_addr,
sn->entry[idx].cache.slink.lval_offset))) {
H5HL_remove(f, bt_udata->heap_addr,
sn->entry[idx].cache.slink.lval_offset,
HDstrlen(s)+1);
}
H5E_clear(); /*no big deal*/
} else {
/* Decrement the reference count */
assert(H5F_addr_defined(sn->entry[idx].header));
if (H5O_link(sn->entry+idx, -1)<0) {
HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, H5B_INS_ERROR,
"unable to decrement object link count");
}
}
/* Remove the name from the local heap */
if ((s=H5HL_peek(f, bt_udata->heap_addr, sn->entry[idx].name_off))) {
H5HL_remove(f, bt_udata->heap_addr, sn->entry[idx].name_off,
HDstrlen(s)+1);
}
H5E_clear(); /*no big deal*/
/* Remove the entry from the symbol table node */
if (1==sn->nsyms) {
/*
* We are about to remove the only symbol in this node. Copy the left
* key to the right key and mark the right key as dirty. Free this
* node and indicate that the pointer to this node in the B-tree
* should be removed also.
*/
assert(0==idx);
*rt_key = *lt_key;
*rt_key_changed = TRUE;
sn->nsyms = 0;
sn->dirty = TRUE;
if (H5AC_unprotect(f, H5AC_SNODE, addr, sn)<0 ||
H5AC_flush(f, H5AC_SNODE, addr, TRUE)<0 ||
H5MF_xfree(f, H5FD_MEM_BTREE, addr, (hsize_t)H5G_node_size(f))<0) {
sn = NULL;
HGOTO_ERROR(H5E_SYM, H5E_PROTECT, H5B_INS_ERROR,
"unable to free symbol table node");
}
sn = NULL;
ret_value = H5B_INS_REMOVE;
} else if (0==idx) {
/*
* We are about to remove the left-most entry from the symbol table
* node but there are other entries to the right. No key values
* change.
*/
sn->nsyms -= 1;
sn->dirty = TRUE;
HDmemmove(sn->entry+idx, sn->entry+idx+1,
(sn->nsyms-idx)*sizeof(H5G_entry_t));
ret_value = H5B_INS_NOOP;
} else if (idx+1==sn->nsyms) {
/*
* We are about to remove the right-most entry from the symbol table
* node but there are other entries to the left. The right key
* should be changed to reflect the new right-most entry.
*/
sn->nsyms -= 1;
sn->dirty = TRUE;
rt_key->offset = sn->entry[sn->nsyms-1].name_off;
*rt_key_changed = TRUE;
ret_value = H5B_INS_NOOP;
} else {
/*
* We are about to remove an entry from the middle of a symbol table
* node.
*/
sn->nsyms -= 1;
sn->dirty = TRUE;
HDmemmove(sn->entry+idx, sn->entry+idx+1,
(sn->nsyms-idx)*sizeof(H5G_entry_t));
ret_value = H5B_INS_NOOP;
}
done:
if (sn && H5AC_unprotect(f, H5AC_SNODE, addr, sn)<0) {
HRETURN_ERROR(H5E_SYM, H5E_PROTECT, H5B_INS_ERROR,
"unable to release symbol table node");
}
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_iterate
*
* Purpose: This function gets called during a group iterate operation.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Jun 24 1997
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR argument is passed by value.
*-------------------------------------------------------------------------
*/
static herr_t
H5G_node_iterate (H5F_t *f, void UNUSED *_lt_key, haddr_t addr,
void UNUSED *_rt_key, void *_udata)
{
H5G_bt_ud2_t *bt_udata = (H5G_bt_ud2_t *)_udata;
H5G_node_t *sn = NULL;
int i, nsyms;
size_t n, *name_off=NULL;
const char *name;
char buf[1024], *s;
herr_t ret_value = FAIL;
FUNC_ENTER(H5G_node_iterate, FAIL);
/*
* Check arguments.
*/
assert(f);
assert(H5F_addr_defined(addr));
assert(bt_udata);
/*
* Save information about the symbol table node since we can't lock it
* because we're about to call an application function.
*/
if (NULL == (sn = H5AC_find(f, H5AC_SNODE, addr, NULL, NULL))) {
HGOTO_ERROR(H5E_SYM, H5E_CANTLOAD, FAIL,
"unable to load symbol table node");
}
nsyms = sn->nsyms;
if (NULL==(name_off = H5MM_malloc (nsyms*sizeof(name_off[0])))) {
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,
"memory allocation failed");
}
for (i=0; i<nsyms; i++)
name_off[i] = sn->entry[i].name_off;
sn = NULL;
/*
* Iterate over the symbol table node entries.
*/
for (i=0, ret_value=0; i<nsyms && 0==ret_value; i++) {
if (bt_udata->skip>0) {
--bt_udata->skip;
} else {
name = H5HL_peek (f, bt_udata->group->ent.cache.stab.heap_addr,
name_off[i]);
assert (name);
n = HDstrlen (name);
if (n+1>sizeof(buf)) {
if (NULL==(s = H5MM_malloc (n+1))) {
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,
"memory allocation failed");
}
} else {
s = buf;
}
HDstrcpy (s, name);
ret_value = (bt_udata->op)(bt_udata->group_id, s,
bt_udata->op_data);
if (s!=buf)
H5MM_xfree (s);
}
/* Increment the number of entries passed through */
/* (whether we skipped them or not) */
bt_udata->final_ent++;
}
if (ret_value<0) {
HERROR (H5E_SYM, H5E_CANTINIT, "iteration operator failed");
}
done:
name_off = H5MM_xfree (name_off);
FUNC_LEAVE(ret_value);
}
/*-------------------------------------------------------------------------
* Function: H5G_node_debug
*
* Purpose: Prints debugging information about a symbol table node
* or a B-tree node for a symbol table B-tree.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* matzke@llnl.gov
* Aug 4 1997
*
* Modifications:
* Robb Matzke, 1999-07-28
* The ADDR and HEAP arguments are passed by value.
*-------------------------------------------------------------------------
*/
herr_t
H5G_node_debug(H5F_t *f, haddr_t addr, FILE * stream, int indent,
int fwidth, haddr_t heap)
{
int i;
H5G_node_t *sn = NULL;
herr_t status;
const char *s;
FUNC_ENTER(H5G_node_debug, FAIL);
/*
* Check arguments.
*/
assert(f);
assert(H5F_addr_defined(addr));
assert(stream);
assert(indent >= 0);
assert(fwidth >= 0);
/*
* If we couldn't load the symbol table node, then try loading the
* B-tree node.
*/
if (NULL == (sn = H5AC_protect(f, H5AC_SNODE, addr, NULL, NULL))) {
H5E_clear(); /*discard that error */
status = H5B_debug(f, addr, stream, indent, fwidth, H5B_SNODE, NULL);
if (status < 0) {
HRETURN_ERROR(H5E_SYM, H5E_CANTLOAD, FAIL,
"unable to debug B-tree node");
}
HRETURN(SUCCEED);
}
fprintf(stream, "%*sSymbol Table Node...\n", indent, "");
fprintf(stream, "%*s%-*s %s\n", indent, "", fwidth,
"Dirty:",
sn->dirty ? "Yes" : "No");
fprintf(stream, "%*s%-*s %u\n", indent, "", fwidth,
"Size of Node (in bytes):", (unsigned)H5G_node_size(f));
fprintf(stream, "%*s%-*s %d of %d\n", indent, "", fwidth,
"Number of Symbols:",
sn->nsyms, 2 * H5G_NODE_K(f));
indent += 3;
fwidth = MAX(0, fwidth - 3);
for (i = 0; i < sn->nsyms; i++) {
fprintf(stream, "%*sSymbol %d:\n", indent - 3, "", i);
if (H5F_addr_defined(heap) &&
(s = H5HL_peek(f, heap, sn->entry[i].name_off))) {
fprintf(stream, "%*s%-*s `%s'\n", indent, "", fwidth,
"Name:",
s);
}
H5G_ent_debug(f, sn->entry + i, stream, indent, fwidth, heap);
}
H5AC_unprotect(f, H5AC_SNODE, addr, sn);
FUNC_LEAVE(SUCCEED);
}
|